BLASTN 2.2.31+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: db.fasta 1,870 sequences; 143,726,002 total letters Query= CP014225.1:2234710-2237641|23S_rRNA|Escherichia coli str. K-12 substr. MG1655 strain K-12 Length=2932 Score E Sequences producing significant alignments: (Bits) Value NW_007931121.1 Drosophila melanogaster chromosome X; Y rDNA seq... 87.8 1e-015 NW_001845808.1 Drosophila melanogaster chromosome X 21100002227... 87.8 1e-015 NC_004354.4 Drosophila melanogaster chromosome X 87.8 1e-015 NW_001844974.1 Drosophila melanogaster chromosome X 21100002227... 86.0 5e-015 NW_001845900.1 Drosophila melanogaster chromosome X 21100002227... 66.2 5e-009 NW_001846251.1 Drosophila melanogaster 211000022279343 sequence 64.4 2e-008 NW_001847253.1 Drosophila melanogaster chromosome X; Y 21100002... 64.4 2e-008 NW_001845390.1 Drosophila melanogaster chromosome X 21100002227... 64.4 2e-008 NW_001847097.1 Drosophila melanogaster chromosome X; Y 21100002... 51.8 1e-004 NW_001846569.1 Drosophila melanogaster 211000022278202 sequence 50.0 4e-004 NW_001846961.1 Drosophila melanogaster chromosome X 21100002227... 50.0 4e-004 NW_001845288.1 Drosophila melanogaster 211000022280595 sequence 39.2 0.68 NW_001846320.1 Drosophila melanogaster chromosome X; Y 21100002... 39.2 0.68 NW_001846141.1 Drosophila melanogaster chromosome X; Y 21100002... 39.2 0.68 NW_001846798.1 Drosophila melanogaster chromosome X; Y 21100002... 39.2 0.68 NW_001847040.1 Drosophila melanogaster chromosome X; Y 21100002... 39.2 0.68 NW_001846957.1 Drosophila melanogaster chromosome X; Y 21100002... 39.2 0.68 NW_001846514.1 Drosophila melanogaster chromosome X 21100002227... 39.2 0.68 NW_001846826.1 Drosophila melanogaster chromosome X 21100002227... 39.2 0.68 NW_001846888.1 Drosophila melanogaster chromosome X 21100002227... 39.2 0.68 NT_033777.3 Drosophila melanogaster chromosome 3R 37.4 2.4 NT_033779.5 Drosophila melanogaster chromosome 2L 37.4 2.4 NT_037436.4 Drosophila melanogaster chromosome 3L 35.6 8.3 NT_033778.4 Drosophila melanogaster chromosome 2R 35.6 8.3 > NW_007931121.1 Drosophila melanogaster chromosome X; Y rDNA sequence Length=76973 Score = 87.8 bits (96), Expect = 1e-015 Identities = 127/175 (73%), Gaps = 7/175 (4%) Strand=Plus/Plus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 38104 AAAAGTTACCATAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 38163 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAG--TAGGTC-CCAAGGGTAT 2558 ||| | ||||||||||||| || ||| | | ||||| | || ||||| || Sbjct 38164 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TGAAGCAAAATTCACCAAGCGTTG 38220 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || | ||| || ||| |||||||||||||| ||||||||||||| Sbjct 38221 GATTGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 38274 Score = 87.8 bits (96), Expect = 1e-015 Identities = 127/175 (73%), Gaps = 7/175 (4%) Strand=Plus/Plus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 74288 AAAAGTTACCATAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 74347 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAG--TAGGTC-CCAAGGGTAT 2558 ||| | ||||||||||||| || ||| | | ||||| | || ||||| || Sbjct 74348 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TGAAGCAAAATTCACCAAGCGTTG 74404 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || | ||| || ||| |||||||||||||| ||||||||||||| Sbjct 74405 GATTGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 74458 Score = 78.8 bits (86), Expect = 8e-013 Identities = 124/175 (71%), Gaps = 7/175 (4%) Strand=Plus/Minus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| ||||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 4674 AAAAGTTACCATGGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 4615 Query 2502 TTGGCACCTCGATGTCGGCTCATC---ACATCCTGGGGCTGAAGTAGGTCCCAAGGGTAT 2558 ||| | ||||||||||||| || | || || || || | | ||||| || Sbjct 4614 TTGATCCTTCGATGTCGGCTCTTCCTAATATTGTGAAGCAAAATT---TACCAAGCGTTG 4558 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || | ||| || ||| |||||||||| ||| | ||||||||||| Sbjct 4557 GATTGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTAAGACCCTCGTGAGACAG 4504 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 17290 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 17348 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 17349 AACAGTACGTGAAAC 17363 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 47125 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 47183 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 47184 AACAGTACGTGAAAC 47198 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 71309 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 71367 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 71368 AACAGTACGTGAAAC 71382 Score = 50.0 bits (54), Expect = 4e-004 Identities = 47/59 (80%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| | ||| ||| | ||||||||| Sbjct 37894 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTACATCTCTCAAATAATAACGGAGG 37952 Score = 50.0 bits (54), Expect = 4e-004 Identities = 47/59 (80%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| | ||| ||| | ||||||||| Sbjct 74078 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTACATCTCTCAAATAATAACGGAGG 74136 Score = 41.0 bits (44), Expect = 0.19 Identities = 36/45 (80%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 221 GAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAA 265 |||||||||||| ||| |||| | |||||||||||||||| Sbjct 46830 GAGGAAAAGAAACTAACAAGGATTTTCTTAGTAGCGGCGAGCGAA 46874 Score = 41.0 bits (44), Expect = 0.19 Identities = 36/45 (80%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 221 GAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAA 265 |||||||||||| ||| |||| | |||||||||||||||| Sbjct 71014 GAGGAAAAGAAACTAACAAGGATTTTCTTAGTAGCGGCGAGCGAA 71058 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 48981 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 49024 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 73162 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 73205 Score = 35.6 bits (38), Expect = 8.3 Identities = 34/44 (77%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | | |||| | | |||||||||||||| |||| Sbjct 19142 GGTAAGGGAAGTCGACAAATTAGATCCGTAACTTCGGGATAAGG 19185 > NW_001845808.1 Drosophila melanogaster chromosome X 211000022278879 sequence Length=1963 Score = 87.8 bits (96), Expect = 1e-015 Identities = 127/175 (73%), Gaps = 7/175 (4%) Strand=Plus/Plus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 1488 AAAAGTTACCATAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 1547 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAG--TAGGTC-CCAAGGGTAT 2558 ||| | ||||||||||||| || ||| | | ||||| | || ||||| || Sbjct 1548 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TGAAGCAAAATTCACCAAGCGTTG 1604 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || | ||| || ||| |||||||||||||| ||||||||||||| Sbjct 1605 GATTGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 1658 Score = 50.0 bits (54), Expect = 4e-004 Identities = 47/59 (80%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| | ||| ||| | ||||||||| Sbjct 1278 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTACATCTCTCAAATAATAACGGAGG 1336 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 110 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 153 > NC_004354.4 Drosophila melanogaster chromosome X Length=23542271 Score = 87.8 bits (96), Expect = 1e-015 Identities = 127/175 (73%), Gaps = 7/175 (4%) Strand=Plus/Plus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 23240339 AAAAGTTACCATAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 23240398 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAG--TAGGTC-CCAAGGGTAT 2558 ||| | ||||||||||||| || ||| | | ||||| | || ||||| || Sbjct 23240399 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TGAAGCAAAATTCACCAAGCGTTG 23240455 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || | ||| || ||| |||||||||||||| ||||||||||||| Sbjct 23240456 GAATGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 23240509 Score = 86.0 bits (94), Expect = 5e-015 Identities = 125/173 (72%), Gaps = 8/173 (5%) Strand=Plus/Minus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 23262403 AAAAGTTACCATAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 23262344 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAGGTC-CCAAGGGTATGG 2560 ||| | ||||||||||||| || ||| | | | || | || ||||| || | Sbjct 23262343 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TAAAAT---TCACCAAGCGTTGGA 23262290 Query 2561 CTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 ||||| || | ||| || ||| |||||||||||||| ||||||||||||| Sbjct 23262289 ATGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 23262238 Score = 80.6 bits (88), Expect = 2e-013 Identities = 126/174 (72%), Gaps = 11/174 (6%) Strand=Plus/Minus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 23472788 AAAAGTTACCATAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 23472729 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCC-TGGGGCTGAAGTAGGTC-CCAAGGGTATG 2559 ||| | ||||||||||||| || |||| || || || | || ||||| || || Sbjct 23472728 TTGATCCTTCGATGTCGGCTCTTCCTATCCATGTGGAGCAA--AATTCACCAAGCGT-TG 23472672 Query 2560 GCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || || || ||| ||||| |||||||| ||||||||||||| Sbjct 23472671 GATGTTCACC-----CAG-GGAACGTGAGCTAGGTTTAGACCGTCGTGAGACAG 23472624 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 23206176 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 23206234 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 23206235 AACAGTACGTGAAAC 23206249 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 23214806 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 23214864 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 23214865 AACAGTACGTGAAAC 23214879 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 23279656 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 23279598 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 23279597 AACAGTACGTGAAAC 23279583 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 23537282 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 23537224 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 23537223 AACAGTACGTGAAAC 23537209 Score = 50.0 bits (54), Expect = 4e-004 Identities = 47/59 (80%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| | ||| ||| | ||||||||| Sbjct 23262613 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTACATCTCTCAAATAATAACGGAGG 23262555 Score = 44.6 bits (48), Expect = 0.016 Identities = 46/59 (78%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| ||| ||| | ||||||||| Sbjct 23240129 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTAAGTCTCTCAAATAATAACGGAGG 23240187 Score = 44.6 bits (48), Expect = 0.016 Identities = 46/59 (78%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| ||| ||| | ||||||||| Sbjct 23472998 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTAAATCTCTCAAATAATAACGGAGG 23472940 Score = 39.2 bits (42), Expect = 0.68 Identities = 36/46 (78%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 221 GAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAAC 266 |||||||||||| ||| |||| | ||||||||||||| ||| Sbjct 23205881 GAGGAAAAGAAACTAACAAGGATTTTCTTAGTAGCGGCGAGCAAAC 23205926 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 23216647 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 23216690 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 23442027 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 23442070 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 23535469 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 23535426 Score = 37.4 bits (40), Expect = 2.4 Identities = 35/45 (78%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 221 GAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAA 265 |||||||||||| ||| |||| | |||||||| ||||||| Sbjct 23214511 GAGGAAAAGAAACTAACGAGGATTTTCTTAGTAGCGGAGAGCGAA 23214555 Score = 37.4 bits (40), Expect = 2.4 Identities = 35/45 (78%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 221 GAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAA 265 |||||||||||| ||| |||| | |||||||| ||||||| Sbjct 23537577 GAGGAAAAGAAACTAACGAGGATTTTCTTAGTAGCGGAGAGCGAA 23537533 Score = 35.6 bits (38), Expect = 8.3 Identities = 30/35 (86%), Gaps = 3/35 (9%) Strand=Plus/Minus Query 2217 CCGTAATCCGG--GTTGCGGACAGTGTCTGGTGGG 2249 |||||||| | ||||||| |||||||||||||| Sbjct 22632575 CCGTAATCAAGATGTTGCGG-CAGTGTCTGGTGGG 22632542 > NW_001844974.1 Drosophila melanogaster chromosome X 211000022279676 sequence Length=12187 Score = 86.0 bits (94), Expect = 5e-015 Identities = 125/173 (72%), Gaps = 8/173 (5%) Strand=Plus/Plus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 10951 AAAAGTTACCATAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 11010 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAGGTC-CCAAGGGTATGG 2560 ||| | ||||||||||||| || ||| | | | || | || ||||| || | Sbjct 11011 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TAAAAT---TCACCAAGCGTTGGA 11064 Query 2561 CTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 ||||| || | ||| || ||| |||||||||||||| ||||||||||||| Sbjct 11065 ATGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 11116 Score = 50.0 bits (54), Expect = 4e-004 Identities = 47/59 (80%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| | ||| ||| | ||||||||| Sbjct 10741 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTACATCTCTCAAATAATAACGGAGG 10799 > NW_001845900.1 Drosophila melanogaster chromosome X 211000022278876 sequence Length=1813 Score = 66.2 bits (72), Expect = 5e-009 Identities = 110/158 (70%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| |||||||| |||| | | ||||| ||||||| ||||| || | | Sbjct 159 AAAAGTTACCATAGGGATAACTGGCTTGTGGTGGCCAAGCGTTCATAGCGACGTCGCTTT 100 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAGGTCCCAAGGGTATGGC 2561 ||| | ||||||||||||| || ||| | ||| | | | ||||| || | Sbjct 99 TTGATCCTTCGATGTCGGCTCTTCCTATCATTGGGAAGCAAAATTCACCAAGCGTTGGAT 40 Query 2562 TGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGA 2599 ||||| || | ||| || ||| |||||||||||||| Sbjct 39 TGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTTAGA 3 Score = 50.0 bits (54), Expect = 4e-004 Identities = 47/59 (80%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| | ||| ||| | ||||||||| Sbjct 369 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTACATCTCTCAAATAATAACGGAGG 311 > NW_001846251.1 Drosophila melanogaster 211000022279343 sequence Length=1315 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 604 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 662 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 663 AACAGTACGTGAAAC 677 Score = 41.0 bits (44), Expect = 0.19 Identities = 36/45 (80%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 221 GAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAA 265 |||||||||||| ||| |||| | |||||||||||||||| Sbjct 309 GAGGAAAAGAAACTAACAAGGATTTTCTTAGTAGCGGCGAGCGAA 353 > NW_001847253.1 Drosophila melanogaster chromosome X; Y 211000022279134 sequence Length=1012 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 107 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 49 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 48 AACAGTACGTGAAAC 34 > NW_001845390.1 Drosophila melanogaster chromosome X 211000022278724 sequence Length=2904 Score = 64.4 bits (70), Expect = 2e-008 Identities = 60/75 (80%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 451 GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGA 510 |||||||||| ||| ||||||||||||||||| ||||||||| | | | | |||| | Sbjct 2512 GACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAATA-GAGAGTTA 2570 Query 511 AAAAGAACCTGAAAC 525 || || || |||||| Sbjct 2571 AACAGTACGTGAAAC 2585 > NW_001847097.1 Drosophila melanogaster chromosome X; Y 211000022278339 sequence Length=1047 Score = 51.8 bits (56), Expect = 1e-004 Identities = 51/65 (78%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 2549 CCAAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGA 2608 ||||| || | ||||| || | ||| || ||| |||||||||||||| |||||||| Sbjct 1017 CCAAGCGTTGGATTGTTCACCCATGCAAG-GGAACGTGAGCTGGGTTTAGACCGTCGTGA 959 Query 2609 GACAG 2613 ||||| Sbjct 958 GACAG 954 > NW_001846569.1 Drosophila melanogaster 211000022278202 sequence Length=1184 Score = 50.0 bits (54), Expect = 4e-004 Identities = 47/59 (80%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| | ||| ||| | ||||||||| Sbjct 1009 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTACATCTCTCAAATAATAACGGAGG 1067 > NW_001846961.1 Drosophila melanogaster chromosome X 211000022279467 sequence Length=1078 Score = 50.0 bits (54), Expect = 4e-004 Identities = 47/59 (80%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 ||||| || | ||| || ||||||||||||||||| | ||| ||| | ||||||||| Sbjct 149 GGACATTGCCAGGTAGGGAGTTTGACTGGGGCGGTACATCTCTCAAATAATAACGGAGG 91 > NW_001845288.1 Drosophila melanogaster 211000022280595 sequence Length=3308 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 818 GGTAAGGGAAGTCGGCAAAGTAGATCCGTAACTTCGGGATAAGG 861 > NW_001846320.1 Drosophila melanogaster chromosome X; Y 211000022279708 sequence Length=1275 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 1031 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 988 > NW_001846141.1 Drosophila melanogaster chromosome X; Y 211000022279529 sequence Length=1407 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 699 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 742 > NW_001846798.1 Drosophila melanogaster chromosome X; Y 211000022279055 sequence Length=1123 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 822 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 779 > NW_001847040.1 Drosophila melanogaster chromosome X; Y 211000022278881 sequence Length=1060 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 172 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 215 > NW_001846957.1 Drosophila melanogaster chromosome X; Y 211000022278878 sequence Length=1080 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 24 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 67 > NW_001846514.1 Drosophila melanogaster chromosome X 211000022279531 sequence Length=1200 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 1073 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 1030 > NW_001846826.1 Drosophila melanogaster chromosome X 211000022279108 sequence Length=1115 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 128 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 171 > NW_001846888.1 Drosophila melanogaster chromosome X 211000022278880 sequence Length=1100 Score = 39.2 bits (42), Expect = 0.68 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1668 GGTGAAGGAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGG 1711 ||| | |||| | |||||| | | |||||||||||||| |||| Sbjct 26 GGTAAGGGAAGTCGGCAAATTAGATCCGTAACTTCGGGATAAGG 69 > NT_033777.3 Drosophila melanogaster chromosome 3R Length=32079331 Score = 37.4 bits (40), Expect = 2.4 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1988 ATGATGGCCAGGCTGTCTCCACC 2010 || |||||||||||||||||||| Sbjct 10840782 ATAATGGCCAGGCTGTCTCCACC 10840804 > NT_033779.5 Drosophila melanogaster chromosome 2L Length=23513712 Score = 37.4 bits (40), Expect = 2.4 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 116 GGCGATTTCCGAATGGGGAAACCCAGT 142 ||| ||||| ||||||||||||||||| Sbjct 1462609 GGCAATTTC-GAATGGGGAAACCCAGT 1462634 Score = 37.4 bits (40), Expect = 2.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 282 GCCTGAATCAGTGTGTGTGTTAGTG 306 ||||| |||||||||||||| |||| Sbjct 19240797 GCCTGCATCAGTGTGTGTGTGAGTG 19240773 Score = 35.6 bits (38), Expect = 8.3 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 2635 GCGCTGGAGAACTGAGGGGGGCTG 2658 ||| |||| ||||||||||||||| Sbjct 17076802 GCGATGGAAAACTGAGGGGGGCTG 17076825 > NT_037436.4 Drosophila melanogaster chromosome 3L Length=28110227 Score = 35.6 bits (38), Expect = 8.3 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 2401 GATCCGGTGGTTCTGAATGGAAGG 2424 || |||||||||||||| |||||| Sbjct 10371419 GAACCGGTGGTTCTGAAAGGAAGG 10371442 Score = 35.6 bits (38), Expect = 8.3 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1553 AGCAACAAATGCCCTGCTTCCAGG 1576 |||||||||||||| || |||||| Sbjct 11732390 AGCAACAAATGCCCGGCCTCCAGG 11732367 Score = 35.6 bits (38), Expect = 8.3 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1386 ATGGGAAACAGGTTAATATTCCTG 1409 |||||||||||| ||| ||||||| Sbjct 15612353 ATGGGAAACAGGATAAAATTCCTG 15612330 > NT_033778.4 Drosophila melanogaster chromosome 2R Length=25286936 Score = 35.6 bits (38), Expect = 8.3 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 292 GTGTGTGTGTTAGTGGAAG 310 ||||||||||||||||||| Sbjct 11074796 GTGTGTGTGTTAGTGGAAG 11074778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416780960832 Database: db.fasta Posted date: Feb 6, 2025 8:23 PM Number of letters in database: 143,726,002 Number of sequences in database: 1,870 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2