RID: 3TDRVR7B016	
Job Title:Q67XL4:RecName: Full=Uncharacterized CRM domain-containing...				
Program: BLASTP 
Query: RecName: Full=Uncharacterized CRM domain-containing protein At3g25440, chloroplastic; Flags: Precursor [Arabidopsis thaliana] ID: Q67XL4.1(amino acid) Length: 444
Database: swissprot Non-redundant UniProtKB/SwissProt sequences
	
Sequences producing significant alignments:

Sequences  with  E-value BETTER than threshold
                                                                  Scientific      Common                     Max    Total Query   E   Per.   Acc.                        
Description                                                       Name            Name            Taxid      Score  Score cover Value Ident  Len        Accession        

RecName: Full=Uncharacterized CRM domain-containing protein...    Arabidopsis ... thale cress     3702       912    912   100%  0.0   100.00 444        Q67XL4.1         
RecName: Full=CRM-domain containing factor CFM9, mitochondrial... Arabidopsis ... thale cress     3702       135    135   41%   1e-33 42.86  491        Q9LT57.1         
RecName: Full=CRM-domain containing factor CFM3A,...              Arabidopsis ... thale cress     3702       110    152   42%   9e-25 34.92  881        F4J2U9.1         
RecName: Full=CRM-domain containing factor CFM3,...               Zea mays        NA              4577       110    110   43%   1e-24 33.16  842        A7XN92.1         
RecName: Full=CRM-domain containing factor CFM3,...               Oryza sativa... Japanese rice   39947      106    106   39%   2e-23 34.86  886        Q2R1U8.1         
RecName: Full=CRM-domain containing factor CFM3B, chloroplasti... Arabidopsis ... thale cress     3702       105    105   42%   7e-23 34.18  907        F4JVH1.1         
RecName: Full=CRM-domain containing factor CFM2, chloroplastic... Arabidopsis ... thale cress     3702       95.9   144   59%   1e-19 30.12  1011       Q8L7C2.1         
RecName: Full=Chloroplastic group IIA intron splicing...          Oryza sativa... Japanese rice   39947      80.5   80.5  31%   7e-15 35.66  725        Q6YYA3.1         
RecName: Full=Chloroplastic group IIA intron splicing...          Zea mays        NA              4577       79.7   79.7  33%   1e-14 37.58  715        Q9FYT6.1         
RecName: Full=Chloroplastic group IIA intron splicing...          Arabidopsis ... thale cress     3702       78.2   78.2  37%   4e-14 29.17  720        Q9LF10.2         
RecName: Full=CRS2-associated factor 1, chloroplastic; AltName... Oryza sativa... Japanese rice   39947      56.2   56.2  20%   3e-07 31.87  701        Q5VMQ5.1         
RecName: Full=CRS2-associated factor 1, chloroplastic; AltName... Zea mays        NA              4577       53.1   53.1  20%   3e-06 31.87  674        Q84N49.1         
RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:...  Oryza sativa... Japanese rice   39947      48.9   48.9  20%   5e-05 28.12  428        Q6Z4U2.1         
RecName: Full=CRS2-associated factor 2, chloroplastic; AltName... Zea mays        NA              4577       46.6   46.6  20%   4e-04 26.09  611        Q84N48.1         
RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:...  Oryza sativa... Japanese rice   39947      44.7   44.7  17%   0.001 28.38  366        Q0J7J7.2         
RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:...  Arabidopsis ... thale cress     3702       44.7   44.7  17%   0.001 30.67  405        Q8VYD9.1         
RecName: Full=CRS2-associated factor 2, chloroplastic; AltName... Oryza sativa... Japanese rice   39947      44.3   44.3  15%   0.002 26.47  607        Q657G7.1         
RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:...  Arabidopsis ... thale cress     3702       42.7   42.7  17%   0.004 25.68  358        Q9FFU1.1         

Sequences with E-value WORSE than threshold
                                                                  Scientific      Common                     Max    Total Query   E   Per.   Acc.                        
Description                                                       Name            Name            Taxid      Score  Score cover Value Ident  Len        Accession        

RecName: Full=CRS2-associated factor 1, chloroplastic; AltName... Arabidopsis ... thale cress     3702       41.6   41.6  20%   0.012 26.37  701        Q9SL79.2         

Alignments:

>RecName: Full=Uncharacterized CRM domain-containing protein At3g25440, chloroplastic; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: Q67XL4.1 Length: 444
Range 1: 1 to 444

Score:912 bits(2358), Expect:0.0, 
Method:Compositional matrix adjust., 
Identities:444/444(100%), Positives:444/444(100%), Gaps:0/444(0%)

Query  1    MGFLTAAIRVSTSAASMLLRRKSRQLGFLASSSPLFSSFNSMNRTISSCNIVCKVLHKES  60
            MGFLTAAIRVSTSAASMLLRRKSRQLGFLASSSPLFSSFNSMNRTISSCNIVCKVLHKES
Sbjct  1    MGFLTAAIRVSTSAASMLLRRKSRQLGFLASSSPLFSSFNSMNRTISSCNIVCKVLHKES  60

Query  61   LTRPMWNVSFLRSSSFHSTPARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRW  120
            LTRPMWNVSFLRSSSFHSTPARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRW
Sbjct  61   LTRPMWNVSFLRSSSFHSTPARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRW  120

Query  121  LKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPE  180
            LKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPE
Sbjct  121  LKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPE  180

Query  181  EHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVEL  240
            EHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVEL
Sbjct  181  EHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVEL  240

Query  241  ARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKY  300
            ARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKY
Sbjct  241  ARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKY  300

Query  301  IPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKKIIERSEECLEDEQEEDEAGLEL  360
            IPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKKIIERSEECLEDEQEEDEAGLEL
Sbjct  301  IPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKKIIERSEECLEDEQEEDEAGLEL  360

Query  361  ATDSDLSDIFETDSELEDAKTERPLFLEEFEKFPAINNREDEDFGDLGKAKSEGEENDDD  420
            ATDSDLSDIFETDSELEDAKTERPLFLEEFEKFPAINNREDEDFGDLGKAKSEGEENDDD
Sbjct  361  ATDSDLSDIFETDSELEDAKTERPLFLEEFEKFPAINNREDEDFGDLGKAKSEGEENDDD  420

Query  421  KSPNFDEVDKMFLRAAFLLKKKRR  444
            KSPNFDEVDKMFLRAAFLLKKKRR
Sbjct  421  KSPNFDEVDKMFLRAAFLLKKKRR  444




>RecName: Full=CRM-domain containing factor CFM9, mitochondrial; AltName: Full=Protein CRM FAMILY MEMBER 9; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: Q9LT57.1 Length: 491
Range 1: 50 to 229

Score:135 bits(339), Expect:1e-33, 
Method:Compositional matrix adjust., 
Identities:78/182(43%), Positives:120/182(65%), Gaps:2/182(1%)

Query  135  MTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKN  194
            MT EE+++  L++A+KK   L++ +KK +  E     HDPE+ T E+   + K+G K KN
Sbjct  50   MTDEERLIYNLKRAKKKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKN  109

Query  195  YVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEG  254
            YVPVG RG++ GV+ NMH+HWK H+T+QV    F  +++KE+A  +ARL+GG+V+++H  
Sbjct  110  YVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNV  169

Query  255  NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ  314
             TIIM+RG+NY QP   I  P  TL ++KAL K++   AL + +  I + EQ+L+ +   
Sbjct  170  KTIIMFRGRNYRQPKNLI--PVNTLTKRKALFKARFEQALESQKLNIKKTEQQLRRMGVN  227

Query  315  AE  316
             E
Sbjct  228  PE  229




>RecName: Full=CRM-domain containing factor CFM3A, chloroplastic/mitochondrial; AltName: Full=Protein CRM FAMILY MEMBER 3A; Short=AtCFM3a; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: F4J2U9.1 Length: 881
Range 1: 602 to 785

Score:110 bits(276), Expect:9e-25, 
Method:Compositional matrix adjust., 
Identities:66/189(35%), Positives:111/189(58%), Gaps:8/189(4%)

Query  138  EEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVP  197
            E K+    RK  K E  L +    L+P+E  E   DPE +T EE F + K+GLK K ++ 
Sbjct  602  ERKLAFAERKLLKAERGLAKVEVCLKPAEQRE---DPESITDEERFMFRKLGLKMKAFLL  658

Query  198  VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEG  254
            +GRRG++ G + NMHLHWK  + +++++K  T D VK++A+ L   +GGI++    V +G
Sbjct  659  LGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKG  718

Query  255  NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ  314
              II+YRG++Y +P   ++ P+  L ++KAL +S        + K+I  ++ + + L+A+
Sbjct  719  YAIIVYRGQDYKRPT--MLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAE  776

Query  315  AETKRDYTN  323
             E     T+
Sbjct  777  IEQMEKVTD  785




Range 2: 423 to 512

Score:41.2 bits(95), Expect:0.017, 
Method:Compositional matrix adjust., 
Identities:26/91(29%), Positives:46/91(50%), Gaps:2/91(2%)

Query  177  LTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKE-  235
            L P+E     ++      +  +GR    QG+   M   W+K    ++ IK        E 
Sbjct  423  LGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSER  482

Query  236  IAVELARLTGGIVLDVHEGNTIIMYRGKNYV  266
            +A +L +LTGGI+L  ++ + ++ YRGKN++
Sbjct  483  MAEDLKKLTGGIMLSRNK-DFLVFYRGKNFL  512




>RecName: Full=CRM-domain containing factor CFM3, chloroplastic/mitochondrial; AltName: Full=Protein CRM FAMILY MEMBER 3; Short=ZmCFM3; Flags: Precursor [Zea mays]
Sequence ID: A7XN92.1 Length: 842
Range 1: 550 to 735

Score:110 bits(275), Expect:1e-24, 
Method:Compositional matrix adjust., 
Identities:65/196(33%), Positives:119/196(60%), Gaps:14/196(7%)

Query  144  KLRKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRG  202
            KL  A+KK E+    + K+E +    E +  PE +T EE F + K+GL+ K ++ +GRRG
Sbjct  550  KLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKAFLLLGRRG  609

Query  203  IYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEGNTIIM  259
            ++ G I NMHLHWK  + +++++K  +  +VK IA+ L   +GGI++    V +G  I++
Sbjct  610  VFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVV  669

Query  260  YRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQAETKR  319
            +RGKNY +P +  + PR  L ++KAL +S      +A+ ++  +L ++++ L+A+     
Sbjct  670  FRGKNYRRPSS--LRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAEL----  723

Query  320  DYTNVKVDDNQERSEE  335
                V+++D +E+ +E
Sbjct  724  ----VQMEDVKEQGDE  735




>RecName: Full=CRM-domain containing factor CFM3, chloroplastic/mitochondrial; AltName: Full=Protein CRM FAMILY MEMBER 3; Short=OsCFM3; Flags: Precursor [Oryza sativa Japonica Group]
Sequence ID: Q2R1U8.1 Length: 886
Range 1: 558 to 730

Score:106 bits(265), Expect:2e-23, 
Method:Compositional matrix adjust., 
Identities:61/175(35%), Positives:107/175(61%), Gaps:6/175(3%)

Query  144  KLRKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRG  202
            KL+ A+KK E+    + K+E + +  E    PE +T EE F + K+GL+ K ++ +GRRG
Sbjct  558  KLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLLGRRG  617

Query  203  IYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEGNTIIM  259
            ++ G I NMHLHWK  + +++++K  +  +VK+IA+ L   +GGI++    V +G  I++
Sbjct  618  VFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGYAIVV  677

Query  260  YRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ  314
            +RGK+Y +P    + PR  L ++KAL +S       A+  +I  L + ++ L+A+
Sbjct  678  FRGKDYARPSK--LRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKLKAE  730




>RecName: Full=CRM-domain containing factor CFM3B, chloroplastic; AltName: Full=Protein CRM FAMILY MEMBER 3B; Short=AtCFM3b; AltName: Full=Protein SUPPRESSOR OF RFC THREE 2; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: F4JVH1.1 Length: 907
Range 1: 613 to 805

Score:105 bits(261), Expect:7e-23, 
Method:Compositional matrix adjust., 
Identities:67/196(34%), Positives:118/196(60%), Gaps:11/196(5%)

Query  129  KKEFERMTSEEKILNKL-RKARKKEERLMETMKKL----EPSESAETTHDPEILTPEEHF  183
            K+E E++ S  K++ KL RK    E++L++  + L    E  + AE   D E +T EE F
Sbjct  613  KQEVEKVRSA-KLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEERF  671

Query  184  YYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARL  243
             + K+GLK K ++ +GRRG++ G + NMHLHWK  + +++++K  T +  +++A+ L   
Sbjct  672  MFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVAMALEAE  731

Query  244  TGGIVLDV---HEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKY  300
            +GGI++ V    +G  +I+YRGK+Y +P T  + P+  L ++KAL +S       A+ K+
Sbjct  732  SGGILVSVDKISKGYAVIVYRGKDYKRPTT--LRPKNLLTKRKALARSLELQKREALIKH  789

Query  301  IPRLEQELQLLQAQAE  316
            I  ++   + L+A+ E
Sbjct  790  IEAIQTRSEQLRAEIE  805




>RecName: Full=CRM-domain containing factor CFM2, chloroplastic; AltName: Full=Protein CRM FAMILY MEMBER 2; Short=AtCFM2; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: Q8L7C2.1 Length: 1011
Range 1: 540 to 781

Score:95.9 bits(237), Expect:1e-19, 
Method:Compositional matrix adjust., 
Identities:75/249(30%), Positives:129/249(51%), Gaps:17/249(6%)

Query  139  EKILNKLRKARKKEERLMETMKKLEPSESAETTH-DPEILTPEEHFYYLKMGLKCKNYVP  197
            EK   KL  A +K+    + +  LE  ES + +  D E +T +E +   K+GLK K ++ 
Sbjct  540  EKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLL  599

Query  198  VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVH---EG  254
            +GRRG++ G I NMHLHWK  + ++++   ++ +   ++A  L   +GGI++ V    +G
Sbjct  600  LGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKG  659

Query  255  NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ  314
              II+YRGKNY +P  + + P+  L +++AL +S      ++++ ++ +L   ++ L  Q
Sbjct  660  YAIIVYRGKNYERP--QCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQ  717

Query  315  AETKRDYTNVKVDDNQERSEELKKIIERSEECLEDEQEEDEAGLELATDSDLS------D  368
               +   TN    D     E    ++E   E    E E+    +EL   SDLS      +
Sbjct  718  L-VEDSATNETWSDG----ESSNMMVEEETENQHTEPEKAREKIELGYSSDLSVPSSGEE  772

Query  369  IFETDSELE  377
             +E DSE E
Sbjct  773  NWEDDSEGE  781




Range 2: 133 to 256

Score:48.9 bits(115), Expect:8e-05, 
Method:Compositional matrix adjust., 
Identities:42/154(27%), Positives:71/154(46%), Gaps:31/154(20%)

Query  116  AVVRWLKFFR-WKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDP  174
            A+ R+ +  R WKK+ E ER               KKEE++        PS  AE T   
Sbjct  133  AISRYHELKRVWKKETEMER---------------KKEEKV--------PS-LAELT---  165

Query  175  EILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVK  234
              L P E      +G++    + +G+ GI +G++  +H  W+  + +++  +  +   +K
Sbjct  166  --LPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMK  223

Query  235  EIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQP  268
                 L   TGG+V+    G+ I++YRG NY  P
Sbjct  224  RTHDVLETKTGGLVI-WRSGSKILLYRGVNYQYP  256




>RecName: Full=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; AltName: Full=Chloroplastic RNA splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA SPLICING 1; Flags: Precursor [Oryza sativa Japonica Group]
Sequence ID: Q6YYA3.1 Length: 725
Range 1: 538 to 678

Score:80.5 bits(197), Expect:7e-15, 
Method:Compositional matrix adjust., 
Identities:51/143(36%), Positives:82/143(57%), Gaps:6/143(4%)

Query  150  KKEERLMETMKKLEPSES-AETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVI  208
            KK ER  + + KL  S S ++   D E+LT EE   + K+GLK   +V +GRRG+++GVI
Sbjct  538  KKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVI  597

Query  209  LNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNT---IIMYRGKNY  265
              +H HWK  + ++V+ K     ++   ++ L   TGG ++ +    T   II+YRGKNY
Sbjct  598  EEIHQHWKHKEVVKVITKQNQASQITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNY  657

Query  266  VQPPTEIMSPRITLPRKKALDKS  288
             +P     +P   L +++AL +S
Sbjct  658  RRPTKS--APSNLLTKREALQRS  678




>RecName: Full=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; AltName: Full=Chloroplastic RNA splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA SPLICING 1; Flags: Precursor [Zea mays]
Sequence ID: Q9FYT6.1 Length: 715
Range 1: 530 to 676

Score:79.7 bits(195), Expect:1e-14, 
Method:Compositional matrix adjust., 
Identities:56/149(38%), Positives:82/149(55%), Gaps:6/149(4%)

Query  144  KLRKARKKEERLMETMKKLEPSES-AETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRG  202
            KL    KK ER  + + KL  S S +E + D E LT EE   + ++G K    V +GRRG
Sbjct  530  KLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRG  589

Query  203  IYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNT---IIM  259
            I+ GVI  +H HWK  + ++V+ K     ++   A  L   TGGI++ V +  T   II+
Sbjct  590  IFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIIL  649

Query  260  YRGKNYVQPPTEIMSPRITLPRKKALDKS  288
            YRGKNY +P     S  +T  +++AL +S
Sbjct  650  YRGKNYRRPAKSSFSNLLT--KREALRRS  676




>RecName: Full=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; AltName: Full=Chloroplastic RNA splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA SPLICING 1; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: Q9LF10.2 Length: 720
Range 1: 551 to 717

Score:78.2 bits(191), Expect:4e-14, 
Method:Compositional matrix adjust., 
Identities:49/168(29%), Positives:90/168(53%), Gaps:4/168(2%)

Query  156  METMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHW  215
            ME  K     + +E   D EILT EE     ++GLK  + + +GRRG++ GV+  +H HW
Sbjct  551  MELFKLNSLWKPSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHW  610

Query  216  KKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVH---EGNTIIMYRGKNYVQPPTEI  272
            K  +  +V+        V   A  L   + G+++ +    EG+ I++YRGKNY +P +++
Sbjct  611  KHREVAKVITMQKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKL  670

Query  273  MSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQAETKRD  320
            M+  + L ++KAL +S     L +++ +  + E+ ++ L+      +D
Sbjct  671  MAQNL-LTKRKALQRSVVMQRLGSLKFFAYQRERAIEDLKVSLVNLQD  717




>RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor [Oryza sativa Japonica Group]
Sequence ID: Q5VMQ5.1 Length: 701
Range 1: 183 to 272

Score:56.2 bits(134), Expect:3e-07, 
Method:Compositional matrix adjust., 
Identities:29/91(32%), Positives:49/91(53%), Gaps:1/91(1%)

Query  175  EILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVK  234
            E LT EE    +K  LK K  + +GR G+   ++ N+H HWK+ +  ++  K     ++ 
Sbjct  183  EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD  242

Query  235  EIAVELARLTGGIVLDVHEGNTIIMYRGKNY  265
             +  +L    GG V+  H+G  I ++RG+NY
Sbjct  243  NVCQQLEEKVGGKVIH-HQGGVIFLFRGRNY  272




>RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor [Zea mays]
Sequence ID: Q84N49.1 Length: 674
Range 1: 183 to 272

Score:53.1 bits(126), Expect:3e-06, 
Method:Compositional matrix adjust., 
Identities:29/91(32%), Positives:48/91(52%), Gaps:1/91(1%)

Query  175  EILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVK  234
            E LT EE    +K  LK K  + +GR G+   ++ N+H HWK+ +  ++  K     ++ 
Sbjct  183  EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMD  242

Query  235  EIAVELARLTGGIVLDVHEGNTIIMYRGKNY  265
             I  +L    GG V+   +G  I ++RG+NY
Sbjct  243  NICHQLEEKVGGKVIH-RQGGVIFLFRGRNY  272




>RecName: Full=CRS2-associated factor 1, mitochondrial; Flags: Precursor [Oryza sativa Japonica Group]
Sequence ID: Q6Z4U2.1 Length: 428
Range 1: 155 to 246

Score:48.9 bits(115), Expect:5e-05, 
Method:Compositional matrix adjust., 
Identities:27/96(28%), Positives:51/96(53%), Gaps:9/96(9%)

Query  175  EILTPEEHFYYLKMGLKC-----KNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFT  229
            E LTP E  + +    KC     K  + +GR G+   ++ ++H HWK  + ++V      
Sbjct  155  EPLTPAERAFLVS---KCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVP  211

Query  230  PDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNY  265
              +++ +  +L   TGG+++  H G  +I+YRG++Y
Sbjct  212  TVDMQNVCHQLEDKTGGLIIHRH-GGQLILYRGRHY  246




>RecName: Full=CRS2-associated factor 2, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2; Flags: Precursor [Zea mays]
Sequence ID: Q84N48.1 Length: 611
Range 1: 232 to 321

Score:46.6 bits(109), Expect:4e-04, 
Method:Compositional matrix adjust., 
Identities:24/92(26%), Positives:46/92(50%), Gaps:3/92(3%)

Query  175  EILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVK  234
            E LTP E    +K  +     + +GR G+   ++  +H HW++ +  +V  +     ++K
Sbjct  232  EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK  291

Query  235  EIAVELARLTGGIVLDVHE-GNTIIMYRGKNY  265
             +   L   +GG V  +H  G  + +YRG++Y
Sbjct  292  NLCYHLEEKSGGKV--IHRVGGVVFLYRGRHY  321




>RecName: Full=CRS2-associated factor 2, mitochondrial; Flags: Precursor [Oryza sativa Japonica Group]
Sequence ID: Q0J7J7.2 Length: 366
Range 1: 162 to 234

Score:44.7 bits(104), Expect:0.001, 
Method:Compositional matrix adjust., 
Identities:21/74(28%), Positives:39/74(52%), Gaps:1/74(1%)

Query  192  CKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDV  251
            C   + +G+ G+   +I ++H HWK+ + +++        ++  I   L   TGG V+  
Sbjct  162  CSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVI-Y  220

Query  252  HEGNTIIMYRGKNY  265
               N +I+YRG+NY
Sbjct  221  RNINILILYRGRNY  234




>RecName: Full=CRS2-associated factor 1, mitochondrial; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: Q8VYD9.1 Length: 405
Range 1: 175 to 248

Score:44.7 bits(104), Expect:0.001, 
Method:Compositional matrix adjust., 
Identities:23/75(31%), Positives:41/75(54%), Gaps:1/75(1%)

Query  191  KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD  250
            K K  V +GR G+   ++ +++ HWK  + ++V        ++K +   L   T G V+ 
Sbjct  175  KTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVS  234

Query  251  VHEGNTIIMYRGKNY  265
             H G T+++YRG+NY
Sbjct  235  KHSG-TLVLYRGRNY  248




>RecName: Full=CRS2-associated factor 2, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2; Flags: Precursor [Oryza sativa Japonica Group]
Sequence ID: Q657G7.1 Length: 607
Range 1: 251 to 317

Score:44.3 bits(103), Expect:0.002, 
Method:Compositional matrix adjust., 
Identities:18/68(26%), Positives:36/68(52%), Gaps:1/68(1%)

Query  198  VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTI  257
            +GR G+   ++  +H HW++ +  +V  +     ++K +   L   +GG V+    G  +
Sbjct  251  IGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIH-RVGGVV  309

Query  258  IMYRGKNY  265
             +YRG+NY
Sbjct  310  FLYRGRNY  317




>RecName: Full=CRS2-associated factor 2, mitochondrial; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: Q9FFU1.1 Length: 358
Range 1: 160 to 232

Score:42.7 bits(99), Expect:0.004, 
Method:Compositional matrix adjust., 
Identities:19/74(26%), Positives:39/74(52%), Gaps:1/74(1%)

Query  192  CKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDV  251
            C   + +G+ G+   +I ++H HWKK + +++        ++  I   L   +GG ++  
Sbjct  160  CTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIV-Y  218

Query  252  HEGNTIIMYRGKNY  265
               N +++YRG+NY
Sbjct  219  RNINILVLYRGRNY  232




>RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor [Arabidopsis thaliana]
Sequence ID: Q9SL79.2 Length: 701
Range 1: 241 to 330

Score:41.6 bits(96), Expect:0.012, 
Method:Compositional matrix adjust., 
Identities:24/91(26%), Positives:44/91(48%), Gaps:1/91(1%)

Query  175  EILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVK  234
            E LT EE    +   LK    + +GR G+   ++ N+H  WK+ +  ++  K     ++ 
Sbjct  241  EPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMD  300

Query  235  EIAVELARLTGGIVLDVHEGNTIIMYRGKNY  265
             +  +L    GG V+    G  + ++RG+NY
Sbjct  301  NVCEQLEEKIGGKVI-YRRGGVLFLFRGRNY  330