FastQCFastQC Report
Sun 22 Dec 2024
ENCFF764ZJT.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameENCFF764ZJT.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33293153
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA694460.20858943579179778No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT623890.1873928852578186No Hit
GTCGATTTGGCGAGGGCGCTCCCGACGACGCACCGGGAGGAGGCCCTTCC415770.12488153344923504No Hit
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG373910.11230837764149285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)