MAST - Motif Alignment and Search Tool
MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)
For further information on how to interpret these results or to get
a copy of the MAST software please access http://meme.nbcr.net.
REFERENCE
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
DATABASE AND MOTIFS
DATABASE ./seed.fasta (peptide)
Last updated on Sun May 1 13:06:41 2011
Database contains 220 sequences, 31281 residues
MOTIFS ./memeout.txt (peptide)
MOTIF WIDTH BEST POSSIBLE MATCH
----- ----- -------------------
1 50 QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
2 29 KLYVAIGMYAWHGRHHTAHITSLCKRMGW
3 32 KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
PAIRWISE MOTIF CORRELATIONS:
MOTIF 1 2
----- ----- -----
2 0.12
3 0.12 0.11
No overly similar pairs (correlation > 0.60) found.
Random model letter frequencies (from non-redundant database):
A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
W 0.013 Y 0.033
SECTION I: HIGH-SCORING SEQUENCES
- Each of the following 56 sequences has E-value less than 10.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
- finding the score of the single best match of each motif
to the sequence (best matches may overlap),
- calculating the sequence p-value of each score,
- forming the product of the p-values,
- taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
| Links | Sequence Name | Description | E-value | Length
|
|---|
|
| Y616_GEOKA/31-169
|
| 9.7e-54
| 139
|
|
| Q11VX8_CYTH3/33-170
|
| 4.8e-47
| 138
|
|
| A3I6R9_9BACI/35-171
|
| 4.1e-46
| 137
|
|
| Y277_BACHD/27-163
|
| 4e-42
| 137
|
|
| A5FMQ0_FLAJ1/33-171
|
| 6.7e-38
| 139
|
|
| C2M4Z9_CAPGI/28-166
|
| 1.4e-34
| 139
|
|
| C0BML3_9BACT/33-170
|
| 5.3e-32
| 138
|
|
| C0BH36_9BACT/33-171
|
| 1.5e-28
| 139
|
|
| B9DM64_STACT/28-164
|
| 3.5e-25
| 137
|
|
| A9AZ29_HERA2/13-149
|
| 5.5e-25
| 137
|
|
| A8UGT9_9FLAO/33-170
|
| 1.3e-23
| 138
|
|
| C1ZC16_PLALI/12-149
|
| 4.2e-06
| 138
|
|
| Q67KD8_SYMTH/137-275
|
| 0.00015
| 139
|
|
| Q1IPN5_ACIBL/24-159
|
| 0.00022
| 136
|
|
| A4C1U3_9FLAO/28-164
|
| 0.018
| 137
|
|
| A8LVL0_SALAI/15-174
|
| 0.13
| 160
|
|
| A9WGS1_CHLAA/166-302
|
| 0.22
| 137
|
|
| A1UHT7_MYCSK/7-157
|
| 0.24
| 151
|
|
| A9B650_HERA2/29-177
|
| 0.38
| 149
|
|
| A9AQ47_BURM1/113-250
|
| 0.72
| 138
|
|
| B3T1I3_9ZZZZ/11-154
|
| 0.9
| 144
|
|
| C2W5J9_BACCE/16-167
|
| 0.91
| 152
|
|
| B0CP88_LACBS/33-172
|
| 1.1
| 140
|
|
| B9L214_THERP/11-139
|
| 1.2
| 129
|
|
| C7PMX2_CHIPD/169-306
|
| 1.3
| 138
|
|
| Q11TY9_CYTH3/9-160
|
| 1.6
| 152
|
|
| D2Q0P1_KRIFD/34-173
|
| 1.6
| 140
|
|
| C1ABM0_GEMAT/26-182
|
| 1.7
| 157
|
|
| D2AWN7_STRRD/12-164
|
| 1.7
| 153
|
|
| C5CW18_VARPS/8-152
|
| 1.8
| 145
|
|
| A2U2W5_9FLAO/27-163
|
| 1.9
| 137
|
|
| Q11U87_CYTH3/7-144
|
| 1.9
| 138
|
|
| C7MGI8_BRAFD/13-159
|
| 2.1
| 147
|
|
| D2QN79_SPILD/16-178
|
| 2.5
| 163
|
|
| A4CLF2_ROBBH/31-167
|
| 2.8
| 137
|
|
| A0K9Q8_BURCH/8-152
|
| 3.2
| 145
|
|
| D2Q4E3_KRIFD/105-252
|
| 3.4
| 148
|
|
| A3PV62_MYCSJ/10-159
|
| 3.5
| 150
|
|
| A2WGB4_9BURK/113-250
|
| 4.5
| 138
|
|
| B3T8J7_9ZZZZ/17-144
|
| 4.7
| 128
|
|
| C7PA19_CHIPD/12-166
|
| 5.9
| 155
|
|
| Q0SA37_RHOSR/15-173
|
| 6.3
| 159
|
|
| C1ZDV6_PLALI/14-154
|
| 6.3
| 141
|
|
| Q6HI05_BACHK/29-165
|
| 6.4
| 137
|
|
| C6W435_DYAFD/16-177
|
| 6.4
| 162
|
|
| B8FTJ5_DESHD/8-157
|
| 6.8
| 150
|
|
| Q1IKK6_ACIBL/18-175
|
| 7.3
| 158
|
|
| A1ZQH9_9SPHI/13-181
|
| 7.6
| 169
|
|
| B3C9K6_9BACE/18-166
|
| 7.6
| 149
|
|
| A9WK54_CHLAA/9-146
|
| 7.8
| 138
|
|
| A9B6A9_HERA2/16-179
|
| 7.9
| 164
|
|
| D2SFY1_GEOOG/153-286
|
| 8
| 134
|
|
| A1BGQ4_CHLPD/10-155
|
| 8.4
| 146
|
|
| A3U5S8_9FLAO/7-144
|
| 8.4
| 138
|
|
| Q0RAS6_FRAAA/25-203
|
| 9.2
| 179
|
|
| C1YNM3_NOCDA/15-155
|
| 9.3
| 141
|
SECTION II: MOTIF DIAGRAMS
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- occurrence of motif `n' with p-value less than 0.0001.
- Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.
| Links | Name | Expect | Motifs
|
|---|
|
| Y616_GEOKA/31-169
| 9.7e-54
|
|
|
| Q11VX8_CYTH3/33-170
| 4.8e-47
|
|
|
| A3I6R9_9BACI/35-171
| 4.1e-46
|
|
|
| Y277_BACHD/27-163
| 4e-42
|
|
|
| A5FMQ0_FLAJ1/33-171
| 6.7e-38
|
|
|
| C2M4Z9_CAPGI/28-166
| 1.4e-34
|
|
|
| C0BML3_9BACT/33-170
| 5.3e-32
|
|
|
| C0BH36_9BACT/33-171
| 1.5e-28
|
|
|
| B9DM64_STACT/28-164
| 3.5e-25
|
|
|
| A9AZ29_HERA2/13-149
| 5.5e-25
|
|
|
| A8UGT9_9FLAO/33-170
| 1.3e-23
|
|
|
| C1ZC16_PLALI/12-149
| 4.2e-06
|
|
|
| Q67KD8_SYMTH/137-275
| 0.00015
|
|
|
| Q1IPN5_ACIBL/24-159
| 0.00022
|
|
|
| A4C1U3_9FLAO/28-164
| 0.018
|
|
|
| A8LVL0_SALAI/15-174
| 0.13
|
|
|
| A9WGS1_CHLAA/166-302
| 0.22
|
|
|
| A1UHT7_MYCSK/7-157
| 0.24
|
|
|
| A9B650_HERA2/29-177
| 0.38
|
|
|
| A9AQ47_BURM1/113-250
| 0.72
|
|
|
| B3T1I3_9ZZZZ/11-154
| 0.9
|
|
|
| C2W5J9_BACCE/16-167
| 0.91
|
|
|
| B0CP88_LACBS/33-172
| 1.1
|
|
|
| B9L214_THERP/11-139
| 1.2
|
|
|
| C7PMX2_CHIPD/169-306
| 1.3
|
|
|
| Q11TY9_CYTH3/9-160
| 1.6
|
|
|
| D2Q0P1_KRIFD/34-173
| 1.6
|
|
|
| C1ABM0_GEMAT/26-182
| 1.7
|
|
|
| D2AWN7_STRRD/12-164
| 1.7
|
|
|
| C5CW18_VARPS/8-152
| 1.8
|
|
|
| A2U2W5_9FLAO/27-163
| 1.9
|
|
|
| Q11U87_CYTH3/7-144
| 1.9
|
|
|
| C7MGI8_BRAFD/13-159
| 2.1
|
|
|
| D2QN79_SPILD/16-178
| 2.5
|
|
|
| A4CLF2_ROBBH/31-167
| 2.8
|
|
|
| A0K9Q8_BURCH/8-152
| 3.2
|
|
|
| D2Q4E3_KRIFD/105-252
| 3.4
|
|
|
| A3PV62_MYCSJ/10-159
| 3.5
|
|
|
| A2WGB4_9BURK/113-250
| 4.5
|
|
|
| B3T8J7_9ZZZZ/17-144
| 4.7
|
|
|
| C7PA19_CHIPD/12-166
| 5.9
|
|
|
| Q0SA37_RHOSR/15-173
| 6.3
|
|
|
| C1ZDV6_PLALI/14-154
| 6.3
|
|
|
| Q6HI05_BACHK/29-165
| 6.4
|
|
|
| C6W435_DYAFD/16-177
| 6.4
|
|
|
| B8FTJ5_DESHD/8-157
| 6.8
|
|
|
| Q1IKK6_ACIBL/18-175
| 7.3
|
|
|
| A1ZQH9_9SPHI/13-181
| 7.6
|
|
|
| B3C9K6_9BACE/18-166
| 7.6
|
|
|
| A9WK54_CHLAA/9-146
| 7.8
|
|
|
| A9B6A9_HERA2/16-179
| 7.9
|
|
|
| D2SFY1_GEOOG/153-286
| 8
|
|
|
| A1BGQ4_CHLPD/10-155
| 8.4
|
|
|
| A3U5S8_9FLAO/7-144
| 8.4
|
|
|
| Q0RAS6_FRAAA/25-203
| 9.2
|
|
|
| C1YNM3_NOCDA/15-155
| 9.3
|
|
| SCALE
|
| | |
| |
| |
| |
| |
| |
| |
| 1 |
25 |
50 |
75 |
100 |
125 |
150 |
|
|---|
SECTION III: ANNOTATED SEQUENCES
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
- the motif number of the occurrence,
- the position p-value of the occurrence,
- the best possible match to the motif, and
- columns whose match to the motif has a positive score (indicated
by a plus sign).
Y616_GEOKA/31-169
LENGTH = 139 COMBINED P-VALUE = 4.40e-56 E-VALUE = 9.7e-54
DIAGRAM: 19-[1]-7-[3]-31
[1]
1.9e-44
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++++++++++++++++++++++++++++++++++ +++ ++++++ ++++
1 AIRGLPSDLRTAVSGLNDEQLNTPYREGGWTVAQVVHHLADASMNAFLRTKWGVTEDGPTVKPFAESEWAKTADA
[3]
3.5e-20
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+++++++ ++++++ ++++++++++++++ +
76 CLLPIEPSLLLLDGLHARWAALLESMTEADFHRTVRPEGAAGEMPLYVLTALYAWHGKHHTAQV
Q11VX8_CYTH3/33-170
LENGTH = 138 COMBINED P-VALUE = 2.20e-49 E-VALUE = 4.8e-47
DIAGRAM: 19-[1]-6-[3]-31
[1]
1.9e-42
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+++++++ +++++++++++ +++++++++++++++++++++++++ + +
1 DIHLFPQRLREAAETLSQAQLDTTYRPGGWTIRQVIHHCADSHMNSFIRFKLALTEDTPTIKPYWEDRWAECIDS
[3]
2.9e-15
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ +++ ++ +++++ ++++++++++++ +++
76 KMAIEFSLHILDGLHTRWTALLESLSAAELKREFNHPEHHAPFKIDEYIGMYAWHSNHHLAHI
A3I6R9_9BACI/35-171
LENGTH = 137 COMBINED P-VALUE = 1.85e-48 E-VALUE = 4.1e-46
DIAGRAM: 19-[1]-6-[3]-30
[1]
1.6e-40
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++ +++++ ++++ ++++++++++++++++++++++++ ++++++ ++++
1 DIRLLPQQLEEALSGASEQELAKSYRENGWTVTQLVHHIADSHMNSYIRFKLALTEDEPTIKPYNEAEWALLPDS
[3]
1.4e-15
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
++++++++++ ++++++ ++ +++ +++++
76 EMPIATSLKLIECLHGRWVYLLTSLTNEQLQRAFNHPDSGLTILEQAIGLYAWHGKHHLAHI
Y277_BACHD/27-163
LENGTH = 137 COMBINED P-VALUE = 1.80e-44 E-VALUE = 4e-42
DIAGRAM: 19-[1]-6-[3]-30
[1]
9.2e-36
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++ +++++ ++ ++++++++ +++++++ + +++++++++++++++++++
1 EITTLPSRLHALTVSLDELELTKTYRENSWNVRQLIHHISDSHLNGYMRMKLALTEDNPVVKTYEESEWAKLIDY
[3]
8.0e-17
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+++ ++++++++++++++ ++ ++++++++
76 ELPIRVSLQLLESLHERWTYLLKNLTATQLQRTYQYPDGSIMRIEQSIALYAWHGNHHLAHI
A5FMQ0_FLAJ1/33-171
LENGTH = 139 COMBINED P-VALUE = 3.03e-40 E-VALUE = 6.7e-38
DIAGRAM: 19-[1]-7-[3]-31
[1]
2.0e-38
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+++++++ ++++++++++ + ++++ ++++++++++ ++ +++++++ +
1 EIAALPEKLRNETFDLNEEQLDTPYRPDGWTVRQVIHHCAESHMNCYIRLKWALTENNPIIKPYDEKLWSEMPDS
[3]
8.1e-10
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ ++++ ++++++++ + +++ ++++
76 LSMPIAPTLSLLEGLHFRLSYIMKNLSENDLEKSFIHPENNSEYRIKQIIGMYAWHGNHHLAHI
C2M4Z9_CAPGI/28-166
LENGTH = 139 COMBINED P-VALUE = 6.19e-37 E-VALUE = 1.4e-34
DIAGRAM: 19-[1]-7-[3]-31
[1]
1.6e-34
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++ +++++++++++ ++++++ ++++++ +++++++++ ++++++ +
1 ELRRFPYLLEEAVKQCPPNILNLTYREGGWTIAQIVHHLADVDMNSFIRCKLALTEENPMVKPYEETLWAEIPEA
[3]
4.1e-10
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+++++ +++ + ++ ++ ++++++++
76 KDFYISPSLRIIEGVHWRWWKFLRALTPEDFEKTYRHPQSGQTISIKQEIAKSVWHGKHHLAHI
C0BML3_9BACT/33-170
LENGTH = 138 COMBINED P-VALUE = 2.40e-34 E-VALUE = 5.3e-32
DIAGRAM: 19-[1]-6-[3]-31
[1]
3.2e-30
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++ + +++ ++++++++++++++ ++ ++++++++ + +++++++++
1 EVDQLPTLLAKLSSQFKESFLDSSLRSGAWTIRQLIHHIADSHHHAYTRFKWTLTENEPMIKAYDEKAWSALSDA
[3]
6.6e-12
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
++++ ++++ +++ ++ ++ +++ + + ++ +
76 TAPIQLSLDHLSSVHRKWVFLLEKMNENDFSKRFQHPETKSFHFLYDYLGVYAWHGNHHLAQI
C0BH36_9BACT/33-171
LENGTH = 139 COMBINED P-VALUE = 6.83e-31 E-VALUE = 1.5e-28
DIAGRAM: 19-[1]-7-[3]-31
[1]
4.4e-28
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ ++ +++++++++++++++++ ++++++ ++ + +++++ + ++ +
1 LLEEFPEKLRKSVSNLSKETLLNHYRPGSWTIAQVVHHLADSHMHSYLRFKHAILETTPSIKDYQEAHWAELPDA
[3]
4.4e-10
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ + +++++ +++++++ + ++++ ++ +
76 SETDLSYSLDLLTALHKRWTIFLNTLSEKDLSKTYYHPEREKYYPLNTTILIYAWHGEHHLAHI
B9DM64_STACT/28-164
LENGTH = 137 COMBINED P-VALUE = 1.59e-27 E-VALUE = 3.5e-25
DIAGRAM: 19-[1]-6-[3]-30
[1]
2.0e-25
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+++++++++ ++++++++++ +++++++ +++ + + ++++++
1 AIEKLPEELTTLTSNLSQTARHATYREGSWDVQTLVHHIADAHMHGFIRTKLILTENQPNVCSFEENEWVKLPDN
[3]
1.1e-09
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ + +++++ ++++++++++ ++ + +
76 EVPLEYSLDLINGIHKRWATLLSSLPVEAYNRTMYHADGGVQKLADLISKMAWHGDHHLEHI
A9AZ29_HERA2/13-149
LENGTH = 137 COMBINED P-VALUE = 2.48e-27 E-VALUE = 5.5e-25
DIAGRAM: 19-[1]-6-[3]-30
[1]
1.9e-23
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++++ + + +++++ ++++++ ++ +++ ++ + ++ ++ +++++ +
1 TILHLPAQLHALVDRLDLEQLNTAYISNEWTIAQNIHHLADTQMTLFIRIKLLLLEDYPTLKPFDQDTWVTTVDS
[3]
6.1e-11
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
++++++ ++++ ++ +++ ++ + +++
76 VGPIETSLTILQGLQERAATLVNSLDLASFERTGWHPENGETTLEQVVRYYARHGELHLEQI
A8UGT9_9FLAO/33-170
LENGTH = 138 COMBINED P-VALUE = 5.88e-26 E-VALUE = 1.3e-23
DIAGRAM: 19-[1]-6-[3]-31
[1]
4.5e-27
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+++ ++ ++ + +++++ ++++ ++ +++++++++ +++++++ + +
1 SIEALPQSIISVTKNLSEEELNYKYRPNGWSIKQVVHHCADSHINSIIRFKLGLTENTPTIRPYFEDRFAKLSDY
[3]
8.5e-07
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
++++ ++ + + ++ ++++ ++ +++
76 DQPIDTAISILNGVHKKLGVILRGLNDDELKREFVHPEHGKHFSLEETIGVYAWHSNHHLAHI
C1ZC16_PLALI/12-149
LENGTH = 138 COMBINED P-VALUE = 1.93e-08 E-VALUE = 4.2e-06
DIAGRAM: 19-[1]-69
[1]
9.7e-11
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + + + + ++ ++ + + + + ++ + +++++++
1 AYVAGGAKLIAAFDGLTKADLQAVPVPGTWSLQQIATHIYDSDLIGTDRMKRIAAMPNPLICAYDESAFNTLPGM
Q67KD8_SYMTH/137-275
LENGTH = 139 COMBINED P-VALUE = 6.69e-07 E-VALUE = 0.00015
DIAGRAM: 19-[1]-70
[1]
6.0e-10
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++ + + ++ ++ +++++++ + + ++ + + ++
1 LYRTGPARLADAVGRLGDAGLDVPRAPGKWTARQIVHHIVDSDAETFHVLRIALALPGRRIATTVWENDEWMRGL
Q1IPN5_ACIBL/24-159
LENGTH = 136 COMBINED P-VALUE = 1.02e-06 E-VALUE = 0.00022
DIAGRAM: 19-[1]-5-[3]-30
[1] [
1.0e-05 2
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW K
+ + + + + ++ + ++ + + ++ +++ +
1 SLAETPGKLDRILSSFPEEQIRRRPAPGKWSPAEIAIHLSEVEMVVGVRVRLVIGTNGIAIQGFDQDSWATRYGH
3]
.7e-07
LPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ ++ + +++ ++ ++++++++++
76 TDLDIALEAFRALRAANVAFYRSLSPEQWEQYGMHSERGKETARRIVELCAGHDINHLRQI
A4C1U3_9FLAO/28-164
LENGTH = 137 COMBINED P-VALUE = 8.31e-05 E-VALUE = 0.018
DIAGRAM: 19-[1]-68
[1]
5.3e-08
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ ++ + ++ ++ ++ + + ++ + + +++ +
1 NLESAQVAFNQLLHTVSKDKHSFSYAAGKWTLKEVIQHIIDTERIFCYRALCFARNDKTALPGYDQDLFVENDTA
A8LVL0_SALAI/15-174
LENGTH = 160 COMBINED P-VALUE = 6.12e-04 E-VALUE = 0.13
DIAGRAM: 99-[3]-29
[3]
2.0e-07
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ ++ +++ +++ + +++++++++
76 VSCLGYRVGWHFGGQDVDSQTFAYAGTADEALKQLDEMYGRWNAGVRGLSDADLENPPTMGPERFPIEGIVLHVN
A9WGS1_CHLAA/166-302
LENGTH = 137 COMBINED P-VALUE = 1.02e-03 E-VALUE = 0.22
DIAGRAM: 75-[3]-30
[3]
1.3e-05
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ +++ + + +++++++ + +++
76 TVPIADLLEQYTSSRQQTLNLLRGLTQAAWQRIGYHAIFGPVPLLHQGNWVVTHEQGHLIEL
A1UHT7_MYCSK/7-157
LENGTH = 151 COMBINED P-VALUE = 1.10e-03 E-VALUE = 0.24
DIAGRAM: 87-[3]-32
[3]
2.6e-07
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ + ++++ ++ + ++++++++++
76 DGVEPPARTDVTWPGGAAAVSRIRELAARWRATVESLTATDLERNSAFPWGTDRGRTVADSVLWLHVELTKNAAE
A9B650_HERA2/29-177
LENGTH = 149 COMBINED P-VALUE = 1.71e-03 E-VALUE = 0.38
DIAGRAM: 149
A9AQ47_BURM1/113-250
LENGTH = 138 COMBINED P-VALUE = 3.29e-03 E-VALUE = 0.72
DIAGRAM: 138
B3T1I3_9ZZZZ/11-154
LENGTH = 144 COMBINED P-VALUE = 4.10e-03 E-VALUE = 0.9
DIAGRAM: 18-[1]-76
[1]
1.5e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++ ++ +++++ ++ + + + ++ +
1 KVQSVRDELLGLMDGMDYCLDWKADPSSWSVRQVVYHLLDTPPGGMNQLLWGVLSGEIQEIDLWANLDNITPDRS
C2W5J9_BACCE/16-167
LENGTH = 152 COMBINED P-VALUE = 4.16e-03 E-VALUE = 0.91
DIAGRAM: 152
B0CP88_LACBS/33-172
LENGTH = 140 COMBINED P-VALUE = 4.82e-03 E-VALUE = 1.1
DIAGRAM: 77-[1]-13
[1]
1.5e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ ++ ++ + ++ +++ + + ++ + +
76 ETSRSCARQALVDTVKQLGEVVPDSKLNAPITLQAITPHMHEFQTTFGRELWFASLHCVHHWSMV
B9L214_THERP/11-139
LENGTH = 129 COMBINED P-VALUE = 5.30e-03 E-VALUE = 1.2
DIAGRAM: 14-[1]-65
[1]
3.2e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + ++ +++ + + +++ ++ + ++
1 LLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVAQDTPYFRAVDLSALAETTTSLREAL
C7PMX2_CHIPD/169-306
LENGTH = 138 COMBINED P-VALUE = 5.70e-03 E-VALUE = 1.3
DIAGRAM: 19-[1]-69
[1]
2.5e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + ++ ++ + +++ + ++ + ++ +
1 ELLKTVNAALPLLREMSEMTAAERFSRYKWSPKEIVGHLIDSAINNNVRFIRSQQISLLEIPGYTQEFWVKGQAW
Q11TY9_CYTH3/9-160
LENGTH = 152 COMBINED P-VALUE = 7.12e-03 E-VALUE = 1.6
DIAGRAM: 19-[1]-83
[1]
3.4e-06
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+++ +++++ ++ ++ + + + + +++
1 QLTHTTDELMHLLTPLSENQLNAVPFEGSWTPGQLGDHLYKSYGIAAILNGKTEATARPVEEKIGPIRELFLNVD
D2Q0P1_KRIFD/34-173
LENGTH = 140 COMBINED P-VALUE = 7.20e-03 E-VALUE = 1.6
DIAGRAM: 140
C1ABM0_GEMAT/26-182
LENGTH = 157 COMBINED P-VALUE = 7.71e-03 E-VALUE = 1.7
DIAGRAM: 19-[1]-88
[1]
1.9e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + +++++ + +++ + + + + + + +
1 ALELAQQDMLNVLDAIPVSQRDAMPARGGWTITAIVEHLAIIEDGAGRLLSNLIKQVKDTPETETDAIEPTLEHF
D2AWN7_STRRD/12-164
LENGTH = 153 COMBINED P-VALUE = 7.84e-03 E-VALUE = 1.7
DIAGRAM: 88-[3]-33
[3]
5.7e-06
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ ++++ + + + + +++++++++
76 QGHKPRDRTEITWPGDGTSAVEWLRSLREDWLAMLDRLTDADLDAPAPPFPWPKDSEHTVAHLVAWVNSELMKNV
C5CW18_VARPS/8-152
LENGTH = 145 COMBINED P-VALUE = 8.41e-03 E-VALUE = 1.8
DIAGRAM: 145
A2U2W5_9FLAO/27-163
LENGTH = 137 COMBINED P-VALUE = 8.46e-03 E-VALUE = 1.9
DIAGRAM: 19-[1]-68
[1]
1.5e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + + ++ ++ + + + ++ + +++ +
1 NLVASQNDFEQTLSNIDTSKHNFAYDKGKWTLKELIQHTIDTERVFIYRALCFARNDKTDLPGFDQDIFTQNDNA
Q11U87_CYTH3/7-144
LENGTH = 138 COMBINED P-VALUE = 8.85e-03 E-VALUE = 1.9
DIAGRAM: 138
C7MGI8_BRAFD/13-159
LENGTH = 147 COMBINED P-VALUE = 9.77e-03 E-VALUE = 2.1
DIAGRAM: 38-[2]-80
[2]
3.1e-05
KLYVAIGMYAWHGRHHTAHITSLCKRMGW
+++ ++ + ++ + + + + ++
1 RPRAAADALREHLNPVSLNARPGGHDNSVAWLLWHTGREIDVQLADLTRDEQLWTSHGYADRFALGPLGDTVGYG
D2QN79_SPILD/16-178
LENGTH = 163 COMBINED P-VALUE = 1.14e-02 E-VALUE = 2.5
DIAGRAM: 19-[1]-94
[1]
7.1e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + ++++ +++ ++ ++ ++ + +
1 QIEGHIQQAVVHFQNMDEAALCQPSASGGWSIAQCLDHLNSYGRYYLPRLNQGLASRQHKPATDRLESSWVGGFF
A4CLF2_ROBBH/31-167
LENGTH = 137 COMBINED P-VALUE = 1.25e-02 E-VALUE = 2.8
DIAGRAM: 19-[1]-68
[1]
2.6e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ ++ + ++ ++ ++ + + + +++ +
1 MLERQHRNFPEFILSIPDNLMGHRYADGKWSVAECLGHVYDAERVFQYRAVCFGRKDATPLPGFDQDTWISGNPS
A0K9Q8_BURCH/8-152
LENGTH = 145 COMBINED P-VALUE = 1.44e-02 E-VALUE = 3.2
DIAGRAM: 83-[3]-30
[3]
2.1e-05
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ + ++ ++ + + +++++++++
76 LAIERRYDDAYASDVLAAIRDARRETLEWLSRLTPAQFERTGEFDGYGSLTVRGLVHYLCSHDQQHLAGM
D2Q4E3_KRIFD/105-252
LENGTH = 148 COMBINED P-VALUE = 1.54e-02 E-VALUE = 3.4
DIAGRAM: 81-[3]-35
[3]
7.8e-05
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ + + ++ + + ++ ++++++ +
76 GMHVTATPPYAEVLAAREDRMKLVRDLLTPLTDADLGRPCHRSPAPGYPEGPRPVAECLAVVMGEEIDHHRYA
A3PV62_MYCSJ/10-159
LENGTH = 150 COMBINED P-VALUE = 1.60e-02 E-VALUE = 3.5
DIAGRAM: 86-[3]-32
[3]
3.9e-06
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
+ ++ + +++ ++ + +++ ++ +++
76 GPPADYQSWRYATDAATALRELDEEYARWIAGVRTLDADALARPCGPAEGPYAGYPMSALVLHINREVIHHGAEI
A2WGB4_9BURK/113-250
LENGTH = 138 COMBINED P-VALUE = 2.04e-02 E-VALUE = 4.5
DIAGRAM: 56-[1]-32
[1]
6.8e-05
QLDTPYRVGGWTVRQVVHH
++ + + + +
1 ALAAMPERVAAYAAHVPVGLRTRRPHGTGFSFVEHACHLRDLDAIFAERIDAVRTLELPAIASVDGTALAEERDY
VADSHMNSYIRFKLALTEENPTIKPFDENKW
++ + + + + ++ + ++
76 LAQSLDGALAAFRAGRAALCATIAALQPAELARCGLRDGIRRMSVDELVRELLDHDRTHVLEL
B3T8J7_9ZZZZ/17-144
LENGTH = 128 COMBINED P-VALUE = 2.12e-02 E-VALUE = 4.7
DIAGRAM: 62-[3]-34
[3]
9.1e-06
KLPIDVSLVMLDG
+ +++
1 RLDEGHKTLHASLEGLDPADAFLGSRWSVWEVLNHLDTEKFVAALEDIAAGKMDMLPPFNSREEKLKEDVAHLDE
LHKRWCNLLYSMTPEDFER
++ ++ ++++++++ +
76 NYRRFRALVEGLTEEQMSQPVTAPNPENFFPALTLLELVERSSGHESTHARQI
C7PA19_CHIPD/12-166
LENGTH = 155 COMBINED P-VALUE = 2.68e-02 E-VALUE = 5.9
DIAGRAM: 19-[1]-86
[1]
9.0e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ ++ ++ ++ + ++++ + + ++
1 RFNHTITTWVNYLDDYTLEMLHRQPLPDSWSLGQVYIHIIDDTQYQVAQMKLALSDVDNSKEDMHPNARQMFLHN
Q0SA37_RHOSR/15-173
LENGTH = 159 COMBINED P-VALUE = 2.84e-02 E-VALUE = 6.3
DIAGRAM: 159
C1ZDV6_PLALI/14-154
LENGTH = 141 COMBINED P-VALUE = 2.88e-02 E-VALUE = 6.3
DIAGRAM: 17-[1]-74
[1]
7.2e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + + ++ + + + + + + ++ + ++
1 QLVFARTKTLATLDELLKTDPTGRILGWRPGQGRAHFAWQILHVGITEELFATERLMARPAAFADLVPRFKGGST
Q6HI05_BACHK/29-165
LENGTH = 137 COMBINED P-VALUE = 2.91e-02 E-VALUE = 6.4
DIAGRAM: 19-[1]-68
[1]
7.8e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + + + ++ ++++ + ++ ++ + +
1 ILAQQIEETNLLLKEISDSEGLFRYAPTKWSIKEVIGHIADTERIMAYRLLSIARGETAELPGYNDDMYVLKATF
C6W435_DYAFD/16-177
LENGTH = 162 COMBINED P-VALUE = 2.91e-02 E-VALUE = 6.4
DIAGRAM: 19-[1]-93
[1]
5.9e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
++ + ++++ +++ ++ + + ++ +
1 QVERHIADAVALFQNQSDEFLNRPSATGGWSIAQCLDHLNSYGHYYLPKMRDMMRAAAHSGKPDFTSTRIGAYFT
B8FTJ5_DESHD/8-157
LENGTH = 150 COMBINED P-VALUE = 3.09e-02 E-VALUE = 6.8
DIAGRAM: 87-[3]-31
[3]
6.2e-05
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
++ + + ++ +++ + ++++++
76 DKGTLKKEDIPWPGSVEKAKATINFLHDKWVSYLIDLSDADYLSKQYAKWPLSDRNFSDTALWLNGELMKNAAEI
Q1IKK6_ACIBL/18-175
LENGTH = 158 COMBINED P-VALUE = 3.33e-02 E-VALUE = 7.3
DIAGRAM: 158
A1ZQH9_9SPHI/13-181
LENGTH = 169 COMBINED P-VALUE = 3.44e-02 E-VALUE = 7.6
DIAGRAM: 14-[1]-105
[1]
7.8e-05
QLDTPYRVGGWTVRQVVHHVADSHMNSYIRFKLALTEENPTIKPFDENKW
+ + + ++ +++ + ++ + + + + ++
1 TTEQVIQTLQQDWQNLTTEQWQQSPAVQSWSMAECLEHLNIYARFYHSEIKRVLAQAPAAYQKPVEQVHSNWLGK
B3C9K6_9BACE/18-166
LENGTH = 149 COMBINED P-VALUE = 3.47e-02 E-VALUE = 7.6
DIAGRAM: 149
A9WK54_CHLAA/9-146
LENGTH = 138 COMBINED P-VALUE = 3.53e-02 E-VALUE = 7.8
DIAGRAM: 138
A9B6A9_HERA2/16-179
LENGTH = 164 COMBINED P-VALUE = 3.58e-02 E-VALUE = 7.9
DIAGRAM: 164
D2SFY1_GEOOG/153-286
LENGTH = 134 COMBINED P-VALUE = 3.63e-02 E-VALUE = 8
DIAGRAM: 39-[2]-66
[2]
3.3e-05
KLYVAIGMYAWHGRHHTAHITSLCKRMGW
++++++ ++ + ++ + + +
1 HDVEDTRALLEVAKQLPDDAYRRARLPGFTVLSWSGREESVAALLDTLVWTKEVWLASIEGAGHPAHGADDPAAL
A1BGQ4_CHLPD/10-155
LENGTH = 146 COMBINED P-VALUE = 3.80e-02 E-VALUE = 8.4
DIAGRAM: 146
A3U5S8_9FLAO/7-144
LENGTH = 138 COMBINED P-VALUE = 3.83e-02 E-VALUE = 8.4
DIAGRAM: 138
Q0RAS6_FRAAA/25-203
LENGTH = 179 COMBINED P-VALUE = 4.19e-02 E-VALUE = 9.2
DIAGRAM: 78-[3]-69
[3]
8.3e-05
KLPIDVSLVMLDGLHKRWCNLLYSMTPEDFER
++++ + +++ ++ ++ ++ + ++
76 RLALLDPAEARAYLREVRGRTLDVLDRLAPLPADAGSPDAPPPFGAGGPGDPAGPGSPGSPGSPVSPGGRVSPGG
C1YNM3_NOCDA/15-155
LENGTH = 141 COMBINED P-VALUE = 4.21e-02 E-VALUE = 9.3
DIAGRAM: 141
Debugging Information
CPU: kodomo
Time 0.016001 secs.
mast ./memeout.txt -d ./seed.fasta -ev 10.000000 -mt 0.000100
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Links to Entrez database at NCBI
Links to sequence scores (section I)
Links to motif diagrams (section II)
Links to sequence/motif annotated alignments (section III)
This information