TBLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: X5.fasta 1,868 sequences; 23,962,143 total letters Query= H32_HUMAN Q71DI3 Histone H3.2 (Histone H3/m) (Histone H3/o) Length=136 Score E Sequences producing significant alignments: (Bits) Value scaffold-126 245 1e-74 scaffold-104 245 1e-74 unplaced-984 184 4e-60 scaffold-153 163 4e-51 scaffold-70 60.5 3e-12 unplaced-368 58.9 3e-11 unplaced-13 27.7 1.4 scaffold-168 26.9 3.4 scaffold-242 26.9 3.8 scaffold-100 26.2 6.3 > scaffold-126 Length=92370 Score = 245 bits (625), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 126/136 (93%), Positives = 128/136 (94%), Gaps = 1/136 (1%) Frame = -3 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60 MARTK TARKSTGGKAPRKQLATKA RKS PATGGVKKPHRYRPGTVALREIRRYQKSTE Sbjct 85096 MARTK*TARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE 84920 Query 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120 LLIRKLPFQRLVREIAQDFKTDLRF SSA+ AL EA+EAYLV LFEDTNLCAIHAKRVTI Sbjct 84919 LLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAEAYLVSLFEDTNLCAIHAKRVTI 84740 Query 121 MPKDIQLARRIRGERA 136 PKDIQLARRIRGERA Sbjct 84739 FPKDIQLARRIRGERA 84692 Score = 58.9 bits (141), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/37 (92%), Positives = 34/37 (92%), Gaps = 1/37 (3%) Frame = +2 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVK 37 MARTK TARKSTGGKAPRKQLATK ARKS PATGGVK Sbjct 92261 MARTK*TARKSTGGKAPRKQLATK-ARKSTPATGGVK 92368 > scaffold-104 Length=736462 Score = 245 bits (625), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 126/136 (93%), Positives = 128/136 (94%), Gaps = 1/136 (1%) Frame = +3 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60 MARTK TARKSTGGKAPRKQLATKA RKS PATGGVKKPHRYRPGTVALREIRRYQKSTE Sbjct 185496 MARTK*TARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE 185672 Query 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120 LLIRKLPFQRLVREIAQDFKTDLRF SSA+ AL EA+EAYLV LFEDTNLCAIHAKRVTI Sbjct 185673 LLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAEAYLVSLFEDTNLCAIHAKRVTI 185852 Query 121 MPKDIQLARRIRGERA 136 PKDIQLARRIRGERA Sbjct 185853 FPKDIQLARRIRGERA 185900 Score = 245 bits (625), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 126/136 (93%), Positives = 128/136 (94%), Gaps = 1/136 (1%) Frame = -2 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60 MARTK TARKSTGGKAPRKQLATKA RKS PATGGVKKPHRYRPGTVALREIRRYQKSTE Sbjct 178362 MARTK*TARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE 178186 Query 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120 LLIRKLPFQRLVREIAQDFKTDLRF SSA+ AL EA+EAYLV LFEDTNLCAIHAKRVTI Sbjct 178185 LLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAEAYLVSLFEDTNLCAIHAKRVTI 178006 Query 121 MPKDIQLARRIRGERA 136 PKDIQLARRIRGERA Sbjct 178005 FPKDIQLARRIRGERA 177958 > unplaced-984 Length=389 Score = 184 bits (467), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 91/98 (93%), Positives = 93/98 (95%), Gaps = 0/98 (0%) Frame = +2 Query 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASE 98 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF SSA+ AL EA+E Sbjct 2 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAE 181 Query 99 AYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136 AYLV LFEDTNLCAIHAKRVTI PKDIQLARRIRGERA Sbjct 182 AYLVSLFEDTNLCAIHAKRVTIFPKDIQLARRIRGERA 295 > scaffold-153 Length=574 Score = 163 bits (413), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 82/89 (92%), Positives = 84/89 (94%), Gaps = 0/89 (0%) Frame = -2 Query 48 ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFED 107 ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF SSA+ AL EA+EAYLV LFED Sbjct 573 ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAEAYLVSLFED 394 Query 108 TNLCAIHAKRVTIMPKDIQLARRIRGERA 136 TNLCAIHAKRVTI PKDIQLARRIRGERA Sbjct 393 TNLCAIHAKRVTIFPKDIQLARRIRGERA 307 > scaffold-70 Length=635 Score = 60.5 bits (145), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/38 (92%), Positives = 35/38 (92%), Gaps = 1/38 (3%) Frame = +3 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKK 38 MARTK TARKSTGGKAPRKQLATK ARKS PATGGVKK Sbjct 525 MARTK*TARKSTGGKAPRKQLATK-ARKSTPATGGVKK 635 > unplaced-368 Length=899 Score = 58.9 bits (141), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/37 (92%), Positives = 34/37 (92%), Gaps = 1/37 (3%) Frame = +1 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVK 37 MARTK TARKSTGGKAPRKQLATK ARKS PATGGVK Sbjct 790 MARTK*TARKSTGGKAPRKQLATK-ARKSTPATGGVK 897 > unplaced-13 Length=505 Score = 27.7 bits (60), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/42 (36%), Positives = 20/42 (48%), Gaps = 2/42 (5%) Frame = +3 Query 78 DFKTDLR--FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117 D+ DLR F V + E + + FEDTN+ A KR Sbjct 261 DYMVDLRNSFNVRFVFGVLTTYEKWRILWFEDTNIAATETKR 386 > scaffold-168 Length=4885 Score = 26.9 bits (58), Expect = 3.4, Method: Composition-based stats. Identities = 15/42 (36%), Positives = 20/42 (48%), Gaps = 2/42 (5%) Frame = -1 Query 78 DFKTDLR--FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117 D+ DLR F V + E + + FEDTN+ A KR Sbjct 3130 DYMVDLRNSFNVRFVFGVLTTYEKWRILWFEDTNIAATETKR 3005 > scaffold-242 Length=71096 Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/61 (30%), Positives = 29/61 (48%), Gaps = 0/61 (0%) Frame = +2 Query 13 GGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 72 G P+ LA K A T +K P G + +R I++YQ + L+ + LPF + Sbjct 69701 GRAVPQ*LLAGKDACG*PSTTLVLKVPPMKSYGWIVIRRIQKYQPRSTLICQCLPFSQCW 69880 Query 73 R 73 + Sbjct 69881 K 69883 > scaffold-100 Length=762135 Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust. Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 0/31 (0%) Frame = -1 Query 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134 L +D + ++ + R T+MPK + RR++ E Sbjct 157749 LLDDEDT*SVSSSRATMMPKGYLIKRRVKDE 157657 Lambda K H a alpha 0.321 0.131 0.361 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 383418385 Database: X5.fasta Posted date: Nov 5, 2019 11:58 AM Number of letters in database: 23,962,143 Number of sequences in database: 1,868 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40