FastQCFastQC Report
Вс 15 дек 2019
SRR4240388.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4240388.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10833163
Sequences flagged as poor quality0
Sequence length39
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN174730.1612917667720868No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN150610.13902680131370682No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN134950.12457118941162429No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG10050.08.4440263
GAGCTCG10500.06.7399569
AGAGCTC13050.06.29699958
CGGAAGA14250.05.96120644
CGTATGC14500.05.58806514
GATCGGA15700.05.38279871
GCTCGTA13750.05.278943511
GTATGCC12053.6379788E-125.21733115
GCCGTCT10653.3651304E-105.12840419
TATGCCG13051.8189894E-125.07094316
Produced by FastQC (version 0.11.2)