TBLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: X5.fasta 1,868 sequences; 23,962,143 total letters Query= TBB5_HUMAN P07437 Tubulin beta chain (Tubulin beta-5 chain) Length=444 Score E Sequences producing significant alignments: (Bits) Value unplaced-665 763 0.0 scaffold-26 706 0.0 unplaced-5 347 1e-105 scaffold-57 348 2e-105 scaffold-423 137 2e-41 scaffold-693 31.6 0.91 > unplaced-665 Length=20473 Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/449 (85%), Positives = 407/449 (91%), Gaps = 22/449 (5%) Frame = -2 Query 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRIS------------ 48 MREIVH+ G CGN IGAKFWEVISDEHGIDP G Y GDSDLQL+RI+ Sbjct 7236 MREIVHL*TG*CGN*IGAKFWEVISDEHGIDPNGRYEGDSDLQLERINGEFLNVLFCA** 7057 Query 49 ----------VYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 98 VY+NEA+GGKYVPRA+LVDLEPGTMDSVR+GP+G +FRPDNF+FGQSGAG Sbjct 7056 AFCITLLLIVVYFNEASGGKYVPRAVLVDLEPGTMDSVRAGPYGNLFRPDNFIFGQSGAG 6877 Query 99 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQlthslgggtgsgmgtllisKIREE 158 NNWAKGHYTEGAELVDSVLDVVRKEAE CDCLQGFQ+THSLGGGTG+GMGTLLISKIREE Sbjct 6876 NNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREE 6697 Query 159 YPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLT 218 YPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVEN+DET+CIDNEALYDICFRTLKLT Sbjct 6696 YPDRMMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLT 6517 Query 219 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 278 TPTYGDLNHLVSA MSGVTT +RFPGQLNADLRKLAVNMVPFPRLHFFM GFAPLTSRGS Sbjct 6516 TPTYGDLNHLVSAVMSGVTTSIRFPGQLNADLRKLAVNMVPFPRLHFFMVGFAPLTSRGS 6337 Query 279 QQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNS 338 QQYRAL+V ELT Q+FDAKNMMAA DPRHGRYL VAA+FRG+MSMKEVDEQML+VQ KNS Sbjct 6336 QQYRALSVAELTTQMFDAKNMMAASDPRHGRYLAVAAIFRGKMSMKEVDEQMLSVQTKNS 6157 Query 339 SYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398 SYFVEWIPNNVKTAVCDIPP+GLKM+ TFIGNSTAIQELFKRIS+QF+ MF+RKAFLHWY Sbjct 6156 SYFVEWIPNNVKTAVCDIPPKGLKMSATFIGNSTAIQELFKRISDQFSVMFKRKAFLHWY 5977 Query 399 TGEGMDEMEFTEAESNMNDLVSEYQQYQD 427 TGEGMDEMEFTEAESNMNDLVSEYQQYQD Sbjct 5976 TGEGMDEMEFTEAESNMNDLVSEYQQYQD 5890 > scaffold-26 Length=483268 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/385 (90%), Positives = 369/385 (96%), Gaps = 0/385 (0%) Frame = -3 Query 43 QLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 102 QL I VYYNEA+GGKYVPRA+LVDLEPGTMDSVR+GP+G +FRPDNF+FGQSGAGNNWA Sbjct 109811 QLYLIVVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPYGNLFRPDNFIFGQSGAGNNWA 109632 Query 103 KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQlthslgggtgsgmgtllisKIREEYPDR 162 KGHYTEGAELVDSVLDVVRKEAE CDCLQGFQ+THSLGGGTG+GMGTLLISKIREEYPDR Sbjct 109631 KGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEYPDR 109452 Query 163 IMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTY 222 +M TFSVVPSPKVSDTVVEPYNATLSVHQLVEN+DET+CIDNEALYDICFRTLKLTTPTY Sbjct 109451 MMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLTTPTY 109272 Query 223 GDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR 282 GDLNHLVSA MSGVTT +RFPGQLNADLRKLAVNMVPFPRLHFFM GFAPLTSRGSQQYR Sbjct 109271 GDLNHLVSAVMSGVTTSIRFPGQLNADLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYR 109092 Query 283 ALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFV 342 AL+V ELT Q+FDAKNMMAA DPRHGRYL VAA+FRG+MSMKEVDEQML+VQ KNSSYFV Sbjct 109091 ALSVAELTTQMFDAKNMMAASDPRHGRYLAVAAIFRGKMSMKEVDEQMLSVQTKNSSYFV 108912 Query 343 EWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 402 EWIPNNVKTAVCDIPP+GLKM+ TFIGNSTAIQELFKRIS+QF+ MF+RKAFLHWYTGEG Sbjct 108911 EWIPNNVKTAVCDIPPKGLKMSATFIGNSTAIQELFKRISDQFSVMFKRKAFLHWYTGEG 108732 Query 403 MDEMEFTEAESNMNDLVSEYQQYQD 427 MDEMEFTEAESNMNDLVSEYQQYQD Sbjct 108731 MDEMEFTEAESNMNDLVSEYQQYQD 108657 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 0/48 (0%) Frame = -2 Query 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRIS 48 MREIVH+ G CGN IGAKFWEVISDEHGIDP G Y GDSDLQL+RI+ Sbjct 110007 MREIVHL*TG*CGN*IGAKFWEVISDEHGIDPNGRYEGDSDLQLERIN 109864 > unplaced-5 Length=12763 Score = 347 bits (891), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 176/434 (41%), Positives = 267/434 (62%), Gaps = 10/434 (2%) Frame = +2 Query 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--DRISVYYNEATGGK 58 MRE + I GQ G QIG WE+ EHGI P GT D + + D + +++E GK Sbjct 3257 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDKSVGVGDDSFNTFFSETGAGK 3436 Query 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118 +VPR + DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++DSVL+ Sbjct 3437 HVPRTVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDSVLE 3616 Query 119 VVRKEAESCDCLQGFQlthslgggtgsgmgtllisKIREEYPDRIMNTFSVVPSPKVSDT 178 VRK A++C L GF + HS GGGTGSG G LL+ ++ +Y + F+V P+P++S Sbjct 3617 RVRKLADNCTGL*GFLVFHSFGGGTGSGFGALLLERLSVDYGKKSKLEFAVYPAPQISTA 3796 Query 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238 VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L++ +S +T Sbjct 3797 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIGRPSYTNLNRLIAQVVSSITA 3976 Query 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKN 298 LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+TQ F+ N Sbjct 3977 SLRFDGSLNVDLTEFQTNLVPYPRIHFPLATYAPIISAEKAYHEQLSVHEITQACFEPNN 4156 Query 299 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358 M CDPR+G+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP Sbjct 4157 QMVKCDPRNGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 4336 Query 359 R--------GLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410 + AV + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E Sbjct 4337 TVVPGGDVAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 4516 Query 411 AESNMNDLVSEYQQ 424 A ++ L +Y++ Sbjct 4517 AREDLAALEKDYEE 4558 > scaffold-57 Length=110052 Score = 348 bits (892), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 177/434 (41%), Positives = 267/434 (62%), Gaps = 10/434 (2%) Frame = -2 Query 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--DRISVYYNEATGGK 58 MRE + I GQ G QIG WE+ EHGI P GT D + + D + +++E GK Sbjct 88586 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDKSVGVGDDSFNTFFSETGAGK 88407 Query 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118 +VPR + DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++DSVL+ Sbjct 88406 HVPRTVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDSVLE 88227 Query 119 VVRKEAESCDCLQGFQlthslgggtgsgmgtllisKIREEYPDRIMNTFSVVPSPKVSDT 178 VRK A++C L GF + HS GGGTGSG G LL+ ++ +Y + F+V P+P+VS Sbjct 88226 RVRKLADNCTGL*GFLVFHSFGGGTGSGFGALLLERLSVDYGKKSKLEFAVYPAPQVSTA 88047 Query 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238 VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L++ +S +T Sbjct 88046 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIGRPSYTNLNRLIAQVVSSITA 87867 Query 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKN 298 LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+TQ F+ N Sbjct 87866 SLRFDGSLNVDLTEFQTNLVPYPRIHFPLATYAPIISAEKAYHEQLSVHEITQACFEPNN 87687 Query 299 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358 M CDPR+G+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP Sbjct 87686 QMVKCDPRNGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 87507 Query 359 R--------GLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410 + AV + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E Sbjct 87506 TVVPGGDVAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 87327 Query 411 AESNMNDLVSEYQQ 424 A ++ L +Y++ Sbjct 87326 AREDLAALEKDYEE 87285 > scaffold-423 Length=1446679 Score = 137 bits (345), Expect(3) = 2e-41, Method: Compositional matrix adjust. Identities = 108/383 (28%), Positives = 191/383 (50%), Gaps = 41/383 (11%) Frame = +3 Query 80 PFGQIFRPDNFVFG--QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQlth 137 P+G + P+N SGAGNNWA G Y G L + + D++ +EA++ + L+GF L H Sbjct 190311 PYGLLHNPENVY*S*DGSGAGNNWASG-Y*SGERLSEDLFDILDREADNSESLEGFNLMH 190487 Query 138 slgggtgsgmgtllisKIREEYPDRIMNTFSVVPS--PKVSDTVVEPYNATLSVHQLVEN 195 S+ GGTGSG+G+ L+ + + +P +++ T+SV PS VSD VV+PYN+ LS+ +L EN Sbjct 190488 SIAGGTGSGLGSYLLEMLSDRFPKKLIQTYSVFPSHTEAVSDVVVQPYNSLLSLKRLTEN 190667 Query 196 TDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255 D +DN AL + L + ++ +N +VS M+ + +RFP + L Sbjct 190668 ADMVTVLDNAALNRLAQD*LHIKNASFAQINRMVSTIMATSSIQMRFPSYTYNSMIGLMS 190847 Query 256 NMVPFPRLHFFMPGFAPLTSRGSQQYRALT-VPELTQQVFDAKN---------------- 298 ++VP + H+ + P T + Y A++ V ++ +A N Sbjct 190848 SLVPIRKCHYITCAYTPFTHNDLRDYAAISNVNAASENSTNAVNRSR*SLMKKAGLSDIM 191027 Query 299 ---------MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNV 349 +++ + YL+ ++ +G + K+V + +L ++ KN+ F W P+++ Sbjct 191028 RRLL*PKSRVISVENTPLNCYLSAMSIVQGDVGAKDVHKAILKLKEKNTMQFAPWKPSSM 191207 Query 350 KTAVCDIPPR-------GLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 402 V P G +++ + N T++ +LFK +Q+ + +R AFL Y Sbjct 191208 *INVARRSPCLEDGDT*GGRVSGLMLANHTSVAQLFKSTIDQYDRLRKRNAFLE*YRKLD 191387 Query 403 M--DEM-EFTEAESNMNDLVSEY 422 M D + EF + ++ D+ EY Sbjct 191388 MFKDGLEEFDVSRESLLDVTEEY 191456 Score = 45.1 bits (105), Expect(3) = 2e-41, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 37/79 (47%), Gaps = 18/79 (23%) Frame = +2 Query 10 GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSD------------------LQLDRISVYY 51 G + +G +FW + EHG+ P G SD +DR +++ Sbjct 189962 GMLLSVVGMEFWAQLCAEHGLAPDGLPLTSSD**************SPSIPLMDRKDIFF 190141 Query 52 NEATGGKYVPRAILVDLEP 70 +A G Y+PR+IL+DLEP Sbjct 190142 YQAEDGHYIPRSILIDLEP 190198 Score = 25.8 bits (55), Expect(3) = 2e-41, Method: Compositional matrix adjust. Identities = 9/13 (69%), Positives = 11/13 (85%), Gaps = 0/13 (0%) Frame = +3 Query 2 REIVHIQAGQCGN 14 REI+ +Q GQCGN Sbjct 189873 REIISLQVGQCGN 189911 Score = 132 bits (333), Expect(3) = 3e-41, Method: Compositional matrix adjust. Identities = 99/358 (28%), Positives = 180/358 (50%), Gaps = 41/358 (11%) Frame = -2 Query 80 PFGQIFRPDNFVFG--QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQlth 137 P+G + P+N SGAGNNWA G Y G L + + D++ +EA++ + L+GF L H Sbjct 1101339 PYGLLHNPENVY*S*DGSGAGNNWASG-YQSGGRLSEDLFDILDREADNAESLEGFNLMH 1101163 Query 138 slgggtgsgmgtllisKIREEYPDRIMNTFSVVPS--PKVSDTVVEPYNATLSVHQLVEN 195 S+ GGTGSG+G+ L+ + + +P +++ T+SV PS VSD VV+PYN+ LS+ +L EN Sbjct 1101162 SIAGGTGSGLGSYLLEMLSDRFPKKLIQTYSVFPSHTEAVSDVVVQPYNSVLSLKRLTEN 1100983 Query 196 TDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255 D +DN AL + L + ++ +N +VS M+ + +RFP + L Sbjct 1100982 ADMVTVLDNAALNRLAQD*LHIKNASFAQINRMVSTIMATSSIQMRFPSYTYNSMIGLMS 1100803 Query 256 NMVPFPRLHFFMPGFAPLTSRGSQQY--------------------------RALTVPEL 289 ++VP + H+ ++P T + Y + + ++ Sbjct 1100802 SLVPIRKCHYITCAYSPFTHNDLRDYAASSNVNAAASENSANAVNRSR*SLMKKAGLSDI 1100623 Query 290 TQQVFDAKNMMAACD--PRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIP- 346 +++ K+ + + + P + +L+ + G + K+V + +L ++ KN+ F W P Sbjct 1100622 MRRLL*TKSRVISVENTPLNC-FLSAMTLV*GDVGAKDVHKAILKLKEKNTMQFAPWKPS 1100446 Query 347 ----NNVKTAVC--DIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398 N + + C D P+ +++ + N T++ +LFK +Q+ + +R AFL Y Sbjct 1100445 SM*INVARRSPCLEDGDPQSGRVSGLMLANHTSVAQLFKSTIDQYDRLRKRNAFLE*Y 1100272 Score = 48.9 bits (115), Expect(3) = 3e-41, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 35/63 (56%), Gaps = 8/63 (13%) Frame = -1 Query 16 IGAKFWEVISDEHGIDPTGTYHGDSD--------LQLDRISVYYNEATGGKYVPRAILVD 67 +G +FW + EHG+ P G SD +DR +++ +A G Y+PR+ILVD Sbjct 1101622 VGMEFWAQLCAEHGLAPDGLPLTSSD****SSSPPLMDRKDIFFYQAEDGHYIPRSILVD 1101443 Query 68 LEP 70 LEP Sbjct 1101442 LEP 1101434 Score = 26.2 bits (56), Expect(3) = 3e-41, Method: Compositional matrix adjust. Identities = 9/13 (69%), Positives = 11/13 (85%), Gaps = 0/13 (0%) Frame = -3 Query 2 REIVHIQAGQCGN 14 REI+ +Q GQCGN Sbjct 1101728 REIISLQVGQCGN 1101690 Score = 131 bits (330), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 104/388 (27%), Positives = 193/388 (50%), Gaps = 48/388 (12%) Frame = -2 Query 79 GPFGQIFRPDNFVFG--QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQlt 136 P+G + P+N SGAGNNWA G Y G L + + D++ +EA++ + L+GF L Sbjct 1101342 SPYGLLHNPENVY*S*DGSGAGNNWASG-YQSGGRLSEDLFDILDREADNAESLEGFNLM 1101166 Query 137 hslgggtgsgmgtllisKIREEYPDRIMNTFSVVPS--PKVSDTVVEPYNATLSVHQLVE 194 HS+ GGTGSG+G+ L+ + + +P +++ T+SV PS VSD VV+PYN+ LS+ +L E Sbjct 1101165 HSIAGGTGSGLGSYLLEMLSDRFPKKLIQTYSVFPSHTEAVSDVVVQPYNSVLSLKRLTE 1100986 Query 195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLA 254 N D +DN AL + L + ++ +N +VS M+ + +RFP + L Sbjct 1100985 NADMVTVLDNAALNRLAQD*LHIKNASFAQINRMVSTIMATSSIQMRFPSYTYNSMIGLM 1100806 Query 255 VNMVPFPRLHFFMPGFAPLTSRGSQQY--------------------------RALTVPE 288 ++VP + H+ ++P T + Y + + + Sbjct 1100805 SSLVPIRKCHYITCAYSPFTHNDLRDYAASSNVNAAASENSANAVNRSR*SLMKKAGLSD 1100626 Query 289 LTQQVFDAKNMMAACD--PRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIP 346 + +++ K+ + + + P + +L+ + G + K+V + +L ++ KN+ F W P Sbjct 1100625 IMRRLL*TKSRVISVENTPLNC-FLSAMTLV*GDVGAKDVHKAILKLKEKNTMQFAPWKP 1100449 Query 347 -----NNVKTAVC--DIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399 N + + C D P+ +++ + N T++ +LFK +Q+ + +R AFL Y Sbjct 1100448 SSM*INVARRSPCLEDGDPQSGRVSGLMLANHTSVAQLFKSTIDQYDRLRKRNAFLE*YR 1100269 Query 400 -----GEGMDEMEFTEAESNMNDLVSEY 422 +G++ EF + ++ ++ EY Sbjct 1100268 KLDMFKDGLE--EFDVSRESLLEVTEEY 1100191 > scaffold-693 Length=1268102 Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust. Identities = 14/55 (25%), Positives = 28/55 (51%), Gaps = 10/55 (18%) Frame = +1 Query 309 RYLTVAAVFRGRMSMKEVDE----------QMLNVQNKNSSYFVEWIPNNVKTAV 353 R A++ R R S++ V+ +N+Q +S++ + W PNN +T++ Sbjct 510682 RSTAAASLLRHRCSLQAVNRIRIRT*WEFWNQINLQRSSSTFSINWAPNNARTSI 510846 Lambda K H a alpha 0.320 0.135 0.409 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 2674958559 Database: X5.fasta Posted date: Nov 5, 2019 11:58 AM Number of letters in database: 23,962,143 Number of sequences in database: 1,868 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40