PAL2NAL output
CLUSTAL W multiple sequence alignment

OR1E1_HUMAN                  atgatgggacaaaatcaaaccagcatctcagacttcctgctcctgggcctgcccatccaa
gi|6090790|gb|AAF03326.1|    ATGACTAAGAAGAACCAAACCATGATCTCAGAGTTCCTGCTCCTGGGCCTTCCCATCCAA

OR1E1_HUMAN                  ccagagcagcaaaacctgtgctatgccctgttcttggccatgtatcttaccaccctcctg
gi|6090790|gb|AAF03326.1|    CCTGAGCAGCAGAATCTGTTCTATGCCTTGTTCTTGGCCATGTATCTCACCACCCTCCTG

OR1E1_HUMAN                  gggaacctcctcatcattgtcctcattcgactggactcccatctccacacgcctatgtat
gi|6090790|gb|AAF03326.1|    GGGAACCTCCTCATCATTGTCCTAATTCGACTGGACTCCCATCTCCACACGCCTGTGTAT

OR1E1_HUMAN                  ttgtttctcagcaacttgtccttctctgacctctgcttctcttccgtgaccattcccaag
gi|6090790|gb|AAF03326.1|    TTGTGTCTCAGCAACTTGTCCTTCTCTGACCTCTGCTTTTCCTCGGTCACAATGCCCAAA

OR1E1_HUMAN                  ttgttacagaacatgcagaaccaggacccatccatcccctatgcggactgcctgacccaa
gi|6090790|gb|AAF03326.1|    TTGCTGCAGAACATGCAGAGCCAAAACCCATCCATCCCCTTTGCGGACTGCCTGGCTCAG

OR1E1_HUMAN                  atgtacttcttcctgttatttggagacctggagagcttcctccttgtggccatggcctat
gi|6090790|gb|AAF03326.1|    ATGTACTTTCATCTGTTTTATGGAGTTCTGGAGAGCTTCCTCCTTGTGGTCATGGCTTAT

OR1E1_HUMAN                  gaccgctatgtggccatctgcttccccctgcactacaccgccatcatgagccccatgctc
gi|6090790|gb|AAF03326.1|    CACTGCTATGTGGCTATTTGCTTTCCTCTGCAGTACACCACTATCATGAGCTCCAAGGGT

OR1E1_HUMAN                  tgtctcgccctggtggcgctgtcctgggtgctgaccaccttccatgccatgttacacact
gi|6090790|gb|AAF03326.1|    TGCCTTGCTCTGCTGACACTCTCCTGGCTGTTGACCACTGCCCATGCCAGGTTGCACACC

OR1E1_HUMAN                  ttactcatggccaggttgtgtttttgtgcagacaatgtgatcccccactttttctgtgat
gi|6090790|gb|AAF03326.1|    TTGCTCATGGCCAGGCTGTCCTTTTGTGCTGACAATGTGATTCCTCACTTTTTCTGTGAT

OR1E1_HUMAN                  atgtctgctctgctgaagctggccttctctgacactcgagttaatgaatgggtgatattt
gi|6090790|gb|AAF03326.1|    ACATCTACCTTGTTGAAGCTGGCCTGCTCTGACACGCAAGTCAATGGGTGGGTGATGTTT

OR1E1_HUMAN                  atcatgggagggctcattcttgtcatcccattcctactcatccttgggtcctatgcaaga
gi|6090790|gb|AAF03326.1|    TTCACGGGCGGGCTCATCCTTGTCATCCCATTCCTACTCCTCATCATGTCCTATGCAAGA

OR1E1_HUMAN                  attgtctcctccatcctcaaggtcccttcttctaagggtatctgcaaggccttctctact
gi|6090790|gb|AAF03326.1|    ATCCTCTCCACCATCCTCAGGGTCCCTTGTGCTGGGGGCATCCAGAAGGCTTTCTCCACC

OR1E1_HUMAN                  tgtggctcccacctgtctgtggtgtcactgttctatggaaccgttattggtctctactta
gi|6090790|gb|AAF03326.1|    TGTGGCCCCCACCTCTCTGTGGTGTCTCTCTTCTATGGGACAATTATTGGTCTCTACTTG

OR1E1_HUMAN                  tgctcatcagctaatagttctactctaaaggacactgtcatggctatgatgtacactgtg
gi|6090790|gb|AAF03326.1|    TGCCCATCGACGAATCATAACACTGTGAAGGACACTGTCATGGCTGTGATGTATACTGGG

OR1E1_HUMAN                  gtgacccccatgctgaaccccttcatctacagcctgaggaacagagacatgaagggagcc
gi|6090790|gb|AAF03326.1|    GTGACCCACATGCTGAACCCCTTCATCTACAGCCTGAGGAACAGAGACATGAGGGGGAAC

OR1E1_HUMAN                  ctgagcagagtcattcatcagaagaaaactttcttctctctc
gi|6090790|gb|AAF03326.1|    CCTGGCCAGAGTCTTCAGCACAAAGAAAATTTCTTTGTCTTT




Synonymous (KS) and non-synonymous (KA) substitution rates calcualted by codeml in the PAML package: 
 KS = 0.5039 
 KA = 0.1430 
 KA/KS = 0.2837