GENE ID: 880855 rho | transcription termination factor Rho
[Pseudomonas aeruginosa PAO1] (10 or fewer PubMed links)

 Score =  719 bits (1857),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 342/418 (81%), Positives = 388/418 (92%), Gaps = 0/418 (0%)

Query  1    MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD  60
            MNLTELK  P++EL+ + + MGLEN+AR RKQDIIFA+LK+HAKSGE+I GDGVLEILQD
Sbjct  1    MNLTELKQKPIAELLEMSDAMGLENMARSRKQDIIFALLKKHAKSGEEISGDGVLEILQD  60

Query  61   GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN  120
            GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTI GKIRPPKEGERYFALLKV+ +N
Sbjct  61   GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIRPPKEGERYFALLKVDSIN  120

Query  121  FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP  180
            FD+PENA+NKILFENLTPL  N R++ME GNGSTEDLT RV+DL +PIG+GQRGLIVAPP
Sbjct  121  FDRPENAKNKILFENLTPLFPNERMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP  180

Query  181  KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV  240
            KAGKT++LQNIA +I  N+P+C L+VLLIDERPEEVTEMQR V+GEVVASTFDEP +RHV
Sbjct  181  KAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV  240

Query  241  QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF  300
            QVAEMVIEKAKRLVEHKKDV+ILLDSITRLARAYNTV+P+SGKVLTGGVDA+AL +PKRF
Sbjct  241  QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF  300

Query  301  FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY  360
            FGAARN+EEGGSLTI+ATAL++TGSKMDEVIYEEFKGTGNMEL L RKIAEKRVFPAI+ 
Sbjct  301  FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNMELPLDRKIAEKRVFPAINI  360

Query  361  NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKR  418
            NRSGTR+EELLT+++ELQ+MWILRKI+HPM EI A+EFLI+KL  TKTND+FF+ MKR
Sbjct  361  NRSGTRREELLTSEDELQRMWILRKILHPMDEISAIEFLIDKLKQTKTNDEFFDSMKR  418