******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.5.1 (Release date: Sun Jan 29 10:33:12 2023 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= housekeeping.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ MBIFOFBB_00003 1.0000 100 MBIFOFBB_00004 1.0000 100 MBIFOFBB_00005 1.0000 100 MBIFOFBB_00006 1.0000 100 MBIFOFBB_00007 1.0000 100 MBIFOFBB_00008 1.0000 100 MBIFOFBB_00009 1.0000 100 MBIFOFBB_00010 1.0000 100 MBIFOFBB_00011 1.0000 100 MBIFOFBB_00033 1.0000 100 MBIFOFBB_00044 1.0000 100 MBIFOFBB_00056 1.0000 100 MBIFOFBB_00082 1.0000 100 MBIFOFBB_00148 1.0000 100 MBIFOFBB_00165 1.0000 100 MBIFOFBB_00193 1.0000 100 MBIFOFBB_00201 1.0000 100 MBIFOFBB_00205 1.0000 100 MBIFOFBB_00206 1.0000 100 MBIFOFBB_00235 1.0000 100 MBIFOFBB_00241 1.0000 100 MBIFOFBB_00250 1.0000 100 MBIFOFBB_00256 1.0000 100 MBIFOFBB_00281 1.0000 100 MBIFOFBB_00324 1.0000 100 MBIFOFBB_00354 1.0000 100 MBIFOFBB_00380 1.0000 100 MBIFOFBB_00381 1.0000 100 MBIFOFBB_00419 1.0000 100 MBIFOFBB_00442 1.0000 100 MBIFOFBB_00462 1.0000 100 MBIFOFBB_00463 1.0000 100 MBIFOFBB_00468 1.0000 100 MBIFOFBB_00479 1.0000 100 MBIFOFBB_00480 1.0000 100 MBIFOFBB_00503 1.0000 100 MBIFOFBB_00537 1.0000 100 MBIFOFBB_00538 1.0000 100 MBIFOFBB_00539 1.0000 100 MBIFOFBB_00540 1.0000 100 MBIFOFBB_00544 1.0000 100 MBIFOFBB_00545 1.0000 100 MBIFOFBB_00546 1.0000 100 MBIFOFBB_00547 1.0000 100 MBIFOFBB_00548 1.0000 100 MBIFOFBB_00549 1.0000 100 MBIFOFBB_00550 1.0000 100 MBIFOFBB_00551 1.0000 100 MBIFOFBB_00552 1.0000 100 MBIFOFBB_00553 1.0000 100 MBIFOFBB_00554 1.0000 100 MBIFOFBB_00555 1.0000 100 MBIFOFBB_00556 1.0000 100 MBIFOFBB_00557 1.0000 100 MBIFOFBB_00558 1.0000 100 MBIFOFBB_00559 1.0000 100 MBIFOFBB_00560 1.0000 100 MBIFOFBB_00561 1.0000 100 MBIFOFBB_00562 1.0000 100 MBIFOFBB_00563 1.0000 100 MBIFOFBB_00564 1.0000 100 MBIFOFBB_00566 1.0000 100 MBIFOFBB_00567 1.0000 100 MBIFOFBB_00568 1.0000 100 MBIFOFBB_00569 1.0000 100 MBIFOFBB_00570 1.0000 100 MBIFOFBB_00571 1.0000 100 MBIFOFBB_00573 1.0000 100 MBIFOFBB_00600 1.0000 100 MBIFOFBB_00603 1.0000 100 MBIFOFBB_00605 1.0000 100 MBIFOFBB_00619 1.0000 100 MBIFOFBB_00631 1.0000 100 MBIFOFBB_00632 1.0000 100 MBIFOFBB_00636 1.0000 100 MBIFOFBB_00640 1.0000 100 MBIFOFBB_00655 1.0000 100 MBIFOFBB_00667 1.0000 100 MBIFOFBB_00669 1.0000 100 MBIFOFBB_00671 1.0000 100 MBIFOFBB_00672 1.0000 100 MBIFOFBB_00676 1.0000 100 MBIFOFBB_00688 1.0000 100 MBIFOFBB_00689 1.0000 100 MBIFOFBB_00692 1.0000 100 MBIFOFBB_00730 1.0000 100 MBIFOFBB_00741 1.0000 100 MBIFOFBB_00746 1.0000 100 MBIFOFBB_00752 1.0000 100 MBIFOFBB_00763 1.0000 100 MBIFOFBB_00775 1.0000 100 MBIFOFBB_00782 1.0000 100 MBIFOFBB_00786 1.0000 100 MBIFOFBB_00790 1.0000 100 MBIFOFBB_00792 1.0000 100 MBIFOFBB_00797 1.0000 100 MBIFOFBB_00801 1.0000 100 MBIFOFBB_00827 1.0000 100 MBIFOFBB_00901 1.0000 100 MBIFOFBB_00902 1.0000 100 MBIFOFBB_00918 1.0000 100 MBIFOFBB_00931 1.0000 100 MBIFOFBB_00937 1.0000 100 MBIFOFBB_00981 1.0000 100 MBIFOFBB_01032 1.0000 100 MBIFOFBB_01034 1.0000 100 MBIFOFBB_01064 1.0000 100 MBIFOFBB_01067 1.0000 100 MBIFOFBB_01137 1.0000 100 MBIFOFBB_01138 1.0000 100 MBIFOFBB_01146 1.0000 100 MBIFOFBB_01163 1.0000 100 MBIFOFBB_01168 1.0000 100 MBIFOFBB_01170 1.0000 100 MBIFOFBB_01194 1.0000 100 MBIFOFBB_01206 1.0000 100 MBIFOFBB_01212 1.0000 100 MBIFOFBB_01215 1.0000 100 MBIFOFBB_01227 1.0000 100 MBIFOFBB_01268 1.0000 100 MBIFOFBB_01271 1.0000 100 MBIFOFBB_01296 1.0000 100 MBIFOFBB_01300 1.0000 100 MBIFOFBB_01312 1.0000 100 MBIFOFBB_01323 1.0000 100 MBIFOFBB_01337 1.0000 100 MBIFOFBB_01339 1.0000 100 MBIFOFBB_01343 1.0000 100 MBIFOFBB_01388 1.0000 100 MBIFOFBB_01445 1.0000 100 MBIFOFBB_01463 1.0000 100 MBIFOFBB_01505 1.0000 100 MBIFOFBB_01535 1.0000 100 MBIFOFBB_01536 1.0000 100 MBIFOFBB_01646 1.0000 100 MBIFOFBB_01684 1.0000 100 MBIFOFBB_01697 1.0000 100 MBIFOFBB_01744 1.0000 100 MBIFOFBB_01758 1.0000 100 MBIFOFBB_01773 1.0000 100 MBIFOFBB_01779 1.0000 100 MBIFOFBB_01790 1.0000 100 MBIFOFBB_01809 1.0000 100 MBIFOFBB_01827 1.0000 100 MBIFOFBB_01910 1.0000 100 MBIFOFBB_01921 1.0000 100 MBIFOFBB_02034 1.0000 100 MBIFOFBB_02040 1.0000 100 MBIFOFBB_02065 1.0000 100 MBIFOFBB_02066 1.0000 100 MBIFOFBB_02154 1.0000 100 MBIFOFBB_02155 1.0000 100 MBIFOFBB_02177 1.0000 100 MBIFOFBB_02279 1.0000 100 MBIFOFBB_02345 1.0000 100 MBIFOFBB_02357 1.0000 100 MBIFOFBB_02374 1.0000 100 MBIFOFBB_02392 1.0000 100 MBIFOFBB_02402 1.0000 100 MBIFOFBB_02430 1.0000 100 MBIFOFBB_02486 1.0000 100 MBIFOFBB_02487 1.0000 100 MBIFOFBB_02488 1.0000 100 MBIFOFBB_02546 1.0000 100 MBIFOFBB_02547 1.0000 100 MBIFOFBB_02554 1.0000 100 MBIFOFBB_02557 1.0000 100 MBIFOFBB_02564 1.0000 100 MBIFOFBB_02588 1.0000 100 MBIFOFBB_02590 1.0000 100 MBIFOFBB_02615 1.0000 100 MBIFOFBB_02616 1.0000 100 MBIFOFBB_02626 1.0000 100 MBIFOFBB_02788 1.0000 100 MBIFOFBB_02789 1.0000 100 MBIFOFBB_02792 1.0000 100 MBIFOFBB_02816 1.0000 100 MBIFOFBB_02818 1.0000 100 MBIFOFBB_02883 1.0000 100 MBIFOFBB_03007 1.0000 100 MBIFOFBB_03014 1.0000 100 MBIFOFBB_03020 1.0000 100 MBIFOFBB_03025 1.0000 100 MBIFOFBB_03039 1.0000 100 MBIFOFBB_03107 1.0000 100 MBIFOFBB_03118 1.0000 100 MBIFOFBB_03123 1.0000 100 MBIFOFBB_03129 1.0000 100 MBIFOFBB_03133 1.0000 100 MBIFOFBB_03171 1.0000 100 MBIFOFBB_03181 1.0000 100 MBIFOFBB_03189 1.0000 100 MBIFOFBB_03192 1.0000 100 MBIFOFBB_03208 1.0000 100 MBIFOFBB_03211 1.0000 100 MBIFOFBB_03215 1.0000 100 MBIFOFBB_03229 1.0000 100 MBIFOFBB_03235 1.0000 100 MBIFOFBB_03237 1.0000 100 MBIFOFBB_03246 1.0000 100 MBIFOFBB_03254 1.0000 100 MBIFOFBB_03313 1.0000 100 MBIFOFBB_03383 1.0000 100 MBIFOFBB_03462 1.0000 100 MBIFOFBB_03464 1.0000 100 MBIFOFBB_03499 1.0000 100 MBIFOFBB_03500 1.0000 100 MBIFOFBB_03501 1.0000 100 MBIFOFBB_03685 1.0000 100 MBIFOFBB_03690 1.0000 100 MBIFOFBB_03693 1.0000 100 MBIFOFBB_03705 1.0000 100 MBIFOFBB_03715 1.0000 100 MBIFOFBB_03737 1.0000 100 MBIFOFBB_03790 1.0000 100 MBIFOFBB_03808 1.0000 100 MBIFOFBB_03829 1.0000 100 MBIFOFBB_03841 1.0000 100 MBIFOFBB_03913 1.0000 100 MBIFOFBB_03916 1.0000 100 MBIFOFBB_04008 1.0000 100 MBIFOFBB_04009 1.0000 100 MBIFOFBB_04080 1.0000 100 MBIFOFBB_04100 1.0000 100 MBIFOFBB_04105 1.0000 100 MBIFOFBB_04181 1.0000 100 MBIFOFBB_04193 1.0000 100 MBIFOFBB_04200 1.0000 100 MBIFOFBB_04220 1.0000 100 MBIFOFBB_04241 1.0000 100 MBIFOFBB_04324 1.0000 100 MBIFOFBB_04371 1.0000 100 MBIFOFBB_04420 1.0000 100 MBIFOFBB_04453 1.0000 100 MBIFOFBB_04464 1.0000 100 MBIFOFBB_04482 1.0000 100 MBIFOFBB_04489 1.0000 100 MBIFOFBB_04507 1.0000 100 MBIFOFBB_04568 1.0000 100 MBIFOFBB_04570 1.0000 100 MBIFOFBB_04588 1.0000 100 MBIFOFBB_04610 1.0000 100 MBIFOFBB_04616 1.0000 100 MBIFOFBB_04632 1.0000 100 MBIFOFBB_04664 1.0000 100 MBIFOFBB_04667 1.0000 100 MBIFOFBB_04672 1.0000 100 MBIFOFBB_04688 1.0000 100 MBIFOFBB_04733 1.0000 100 MBIFOFBB_04735 1.0000 100 MBIFOFBB_04736 1.0000 100 MBIFOFBB_04743 1.0000 100 MBIFOFBB_04750 1.0000 100 MBIFOFBB_04769 1.0000 100 MBIFOFBB_04774 1.0000 100 MBIFOFBB_04798 1.0000 100 MBIFOFBB_04804 1.0000 100 MBIFOFBB_04805 1.0000 100 MBIFOFBB_04820 1.0000 100 MBIFOFBB_04823 1.0000 100 MBIFOFBB_04829 1.0000 100 MBIFOFBB_04863 1.0000 100 MBIFOFBB_04903 1.0000 100 MBIFOFBB_04910 1.0000 100 MBIFOFBB_04928 1.0000 100 MBIFOFBB_04933 1.0000 100 MBIFOFBB_04948 1.0000 100 MBIFOFBB_04949 1.0000 100 MBIFOFBB_04973 1.0000 100 MBIFOFBB_05003 1.0000 100 MBIFOFBB_05034 1.0000 100 MBIFOFBB_05037 1.0000 100 MBIFOFBB_05053 1.0000 100 MBIFOFBB_05091 1.0000 100 MBIFOFBB_05098 1.0000 100 MBIFOFBB_05126 1.0000 100 MBIFOFBB_05131 1.0000 100 MBIFOFBB_05146 1.0000 100 MBIFOFBB_05160 1.0000 100 MBIFOFBB_05176 1.0000 100 MBIFOFBB_05192 1.0000 100 MBIFOFBB_05196 1.0000 100 MBIFOFBB_05226 1.0000 100 MBIFOFBB_05242 1.0000 100 MBIFOFBB_05250 1.0000 100 MBIFOFBB_05252 1.0000 100 MBIFOFBB_05255 1.0000 100 MBIFOFBB_05257 1.0000 100 MBIFOFBB_05280 1.0000 100 MBIFOFBB_05284 1.0000 100 MBIFOFBB_05294 1.0000 100 MBIFOFBB_05295 1.0000 100 MBIFOFBB_05297 1.0000 100 MBIFOFBB_05306 1.0000 100 MBIFOFBB_05319 1.0000 100 MBIFOFBB_05350 1.0000 100 MBIFOFBB_05396 1.0000 100 MBIFOFBB_05438 1.0000 100 MBIFOFBB_05475 1.0000 100 MBIFOFBB_05498 1.0000 100 MBIFOFBB_05508 1.0000 100 MBIFOFBB_05538 1.0000 100 MBIFOFBB_05539 1.0000 100 MBIFOFBB_05540 1.0000 100 MBIFOFBB_05541 1.0000 100 MBIFOFBB_05542 1.0000 100 MBIFOFBB_05543 1.0000 100 MBIFOFBB_05544 1.0000 100 MBIFOFBB_05546 1.0000 100 MBIFOFBB_05560 1.0000 100 MBIFOFBB_05564 1.0000 100 MBIFOFBB_05586 1.0000 100 MBIFOFBB_05592 1.0000 100 MBIFOFBB_05594 1.0000 100 MBIFOFBB_05634 1.0000 100 MBIFOFBB_05651 1.0000 100 MBIFOFBB_05664 1.0000 100 MBIFOFBB_05673 1.0000 100 MBIFOFBB_05693 1.0000 100 MBIFOFBB_05705 1.0000 100 MBIFOFBB_05756 1.0000 100 MBIFOFBB_05764 1.0000 100 MBIFOFBB_05773 1.0000 100 MBIFOFBB_05778 1.0000 100 MBIFOFBB_05780 1.0000 100 MBIFOFBB_05790 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme housekeeping.fasta -dna -nmotifs 5 -minw 6 model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 6 maxw= 50 nsites: minsites= 2 maxsites= 326 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 32600 N= 326 sample: seed= 0 hsfrac= 0 searchsize= 32600 norand= no csites= 1000 Letter frequencies in dataset: A 0.29 C 0.212 G 0.221 T 0.277 Background letter frequencies (from file dataset with add-one prior applied): A 0.29 C 0.212 G 0.221 T 0.277 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF SCTACKRYCGSTWDDCRRCCGCCSSADM MEME-1 width = 28 sites = 8 llr = 166 E-value = 5.7e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif SCTACKRYCGSTWDDCRRCCGCCSSADM MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1::83151::1:543:45::::::1954 pos.-specific C 56118:148:411::91:8a:a9451:6 probability G 41:1:44:1a5::43:54::8:164:3: matrix T :39::5:51::94351:13:3:::::3: bits 2.2 * * * 2.0 * * * 1.8 * * ** 1.6 * * * ** Relative 1.3 * * * * * ****** * Entropy 1.1 * * ** * * ****** * * (29.9 bits) 0.9 **** ** * * ****** * * 0.7 ************ ** ******** * 0.4 **************************** 0.2 **************************** 0.0 ---------------------------- Multilevel CCTACTATCGGTAATCGACCGCCGCAAC consensus GT AGGC C TGA AGT T CG GA sequence TG T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCTACKRYCGSTWDDCRRCCGCCSSADM MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------------------- MBIFOFBB_00603 21 3.62e-14 TGCGGTAACT CCTACGGTCGCTTGTCGACCTCCGCAAC CTCCGTATGA MBIFOFBB_04688 12 5.14e-11 TTAAATCGCC CGTACTATTGCTTAACAGCCGCCGGAAC GTAACGGTTA MBIFOFBB_03690 8 1.54e-10 GCCGTCA GTTACTCCCGCTAAGCCATCGCCCCAGC CGGGGCGATT MBIFOFBB_05146 26 2.76e-10 TATGACCGCC GCTAATATCGGTATACAACCGCGCCATA GCTGCTTAAA MBIFOFBB_00566 56 3.24e-10 AACCTGAAAG GCTACGGCCGATAATTGGTCGCCCGAGA AGTTACGGAG MBIFOFBB_03705 23 5.12e-10 AAGTATGGTA ACTACGGTGGGTCGGCGACCTCCGGCAC TACCTACGTT MBIFOFBB_00569 26 5.51e-10 GACTCCGATC CCTCATAACGGTTGTCGTCCGCCGAAAA AACGCCGCGT MBIFOFBB_05192 28 1.11e-09 GTCGTAACGT CTCGCAACCGGCATTCAGCCGCCGCATC CGCGCGCTGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCTACKRYCGSTWDDCRRCCGCCSSADM MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MBIFOFBB_00603 3.6e-14 20_[+1]_52 MBIFOFBB_04688 5.1e-11 11_[+1]_61 MBIFOFBB_03690 1.5e-10 7_[+1]_65 MBIFOFBB_05146 2.8e-10 25_[+1]_47 MBIFOFBB_00566 3.2e-10 55_[+1]_17 MBIFOFBB_03705 5.1e-10 22_[+1]_50 MBIFOFBB_00569 5.5e-10 25_[+1]_47 MBIFOFBB_05192 1.1e-09 27_[+1]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCTACKRYCGSTWDDCRRCCGCCSSADM MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SCTACKRYCGSTWDDCRRCCGCCSSADM width=28 seqs=8 MBIFOFBB_00603 ( 21) CCTACGGTCGCTTGTCGACCTCCGCAAC 1 MBIFOFBB_04688 ( 12) CGTACTATTGCTTAACAGCCGCCGGAAC 1 MBIFOFBB_03690 ( 8) GTTACTCCCGCTAAGCCATCGCCCCAGC 1 MBIFOFBB_05146 ( 26) GCTAATATCGGTATACAACCGCGCCATA 1 MBIFOFBB_00566 ( 56) GCTACGGCCGATAATTGGTCGCCCGAGA 1 MBIFOFBB_03705 ( 23) ACTACGGTGGGTCGGCGACCTCCGGCAC 1 MBIFOFBB_00569 ( 26) CCTCATAACGGTTGTCGTCCGCCGAAAA 1 MBIFOFBB_05192 ( 28) CTCGCAACCGGCATTCAGCCGCCGCATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCTACKRYCGSTWDDCRRCCGCCSSADM MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 28 n= 23798 bayes= 12.2752 E= 5.7e+000 -121 124 76 -965 -965 156 -82 -15 -965 -76 -965 166 137 -76 -82 -965 -21 182 -965 -965 -121 -965 76 85 79 -76 76 -965 -121 82 -965 85 -965 182 -82 -115 -965 -965 218 -965 -121 82 118 -965 -965 -76 -965 166 79 -76 -965 44 37 -965 76 -15 -21 -965 18 85 -965 204 -965 -115 37 -76 118 -965 79 -965 76 -115 -965 182 -965 -15 -965 223 -965 -965 -965 -965 176 -15 -965 223 -965 -965 -965 204 -82 -965 -965 82 150 -965 -121 124 76 -965 159 -76 -965 -965 79 -965 18 -15 37 156 -965 -965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCTACKRYCGSTWDDCRRCCGCCSSADM MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 28 nsites= 8 E= 5.7e+000 0.125000 0.500000 0.375000 0.000000 0.000000 0.625000 0.125000 0.250000 0.000000 0.125000 0.000000 0.875000 0.750000 0.125000 0.125000 0.000000 0.250000 0.750000 0.000000 0.000000 0.125000 0.000000 0.375000 0.500000 0.500000 0.125000 0.375000 0.000000 0.125000 0.375000 0.000000 0.500000 0.000000 0.750000 0.125000 0.125000 0.000000 0.000000 1.000000 0.000000 0.125000 0.375000 0.500000 0.000000 0.000000 0.125000 0.000000 0.875000 0.500000 0.125000 0.000000 0.375000 0.375000 0.000000 0.375000 0.250000 0.250000 0.000000 0.250000 0.500000 0.000000 0.875000 0.000000 0.125000 0.375000 0.125000 0.500000 0.000000 0.500000 0.000000 0.375000 0.125000 0.000000 0.750000 0.000000 0.250000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.750000 0.250000 0.000000 1.000000 0.000000 0.000000 0.000000 0.875000 0.125000 0.000000 0.000000 0.375000 0.625000 0.000000 0.125000 0.500000 0.375000 0.000000 0.875000 0.125000 0.000000 0.000000 0.500000 0.000000 0.250000 0.250000 0.375000 0.625000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCTACKRYCGSTWDDCRRCCGCCSSADM MEME-1 regular expression -------------------------------------------------------------------------------- [CG][CT]TA[CA][TG][AG][TC]CG[GC]T[AT][AGT][TAG]C[GA][AG][CT]C[GT]CC[GC][CG]A[AGT][CA] -------------------------------------------------------------------------------- Time 47.76 secs. ******************************************************************************** ******************************************************************************** MOTIF SGGWMTTTTTVCCGC MEME-2 width = 15 sites = 9 llr = 128 E-value = 1.0e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGGWMTTTTTVCCGC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :2244:::::31::: pos.-specific C 72::4::1::288:a probability G 367:::::::4::a: matrix T ::161aa9aa:12:: bits 2.2 ** 2.0 ** 1.8 ** ** ** 1.6 ** ** ** Relative 1.3 * ***** *** Entropy 1.1 * ***** **** (20.5 bits) 0.9 * ** ***** **** 0.7 ********** **** 0.4 *************** 0.2 *************** 0.0 --------------- Multilevel CGGTATTTTTGCCGC consensus GAAAC A T sequence C C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGWMTTTTTVCCGC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- MBIFOFBB_05255 68 3.95e-08 TATAATGAGC CAGACTTTTTACCGC TGTAATAAAG MBIFOFBB_01445 67 3.95e-08 AGAACTTAAG CGGAATTTTTGCTGC CAGCCCAGGA MBIFOFBB_00004 7 3.95e-08 TAAAGG CGGTATTCTTGCCGC TGATCGTTAC MBIFOFBB_01227 36 4.68e-08 TTCCCAGCTT CGGTCTTTTTCCTGC TGATTCATTT MBIFOFBB_01388 54 1.11e-07 GATAGACTAC CGGTCTTTTTAACGC ACTCTTCCTA MBIFOFBB_00775 62 2.63e-07 ATAAAGAATA CGATTTTTTTACCGC TGTTCATCGT MBIFOFBB_03215 53 3.86e-07 TCGTGGTATA GCGACTTTTTGTCGC TGAGACTGGT MBIFOFBB_04973 83 4.13e-07 TACCCGAGTC GCTAATTTTTGCCGC AAG MBIFOFBB_01163 20 4.45e-07 CCGGTCACCT GAATATTTTTCCCGC CGATTGCGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGWMTTTTTVCCGC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MBIFOFBB_05255 3.9e-08 67_[+2]_18 MBIFOFBB_01445 3.9e-08 66_[+2]_19 MBIFOFBB_00004 3.9e-08 6_[+2]_79 MBIFOFBB_01227 4.7e-08 35_[+2]_50 MBIFOFBB_01388 1.1e-07 53_[+2]_32 MBIFOFBB_00775 2.6e-07 61_[+2]_24 MBIFOFBB_03215 3.9e-07 52_[+2]_33 MBIFOFBB_04973 4.1e-07 82_[+2]_3 MBIFOFBB_01163 4.5e-07 19_[+2]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGWMTTTTTVCCGC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGGWMTTTTTVCCGC width=15 seqs=9 MBIFOFBB_05255 ( 68) CAGACTTTTTACCGC 1 MBIFOFBB_01445 ( 67) CGGAATTTTTGCTGC 1 MBIFOFBB_00004 ( 7) CGGTATTCTTGCCGC 1 MBIFOFBB_01227 ( 36) CGGTCTTTTTCCTGC 1 MBIFOFBB_01388 ( 54) CGGTCTTTTTAACGC 1 MBIFOFBB_00775 ( 62) CGATTTTTTTACCGC 1 MBIFOFBB_03215 ( 53) GCGACTTTTTGTCGC 1 MBIFOFBB_04973 ( 83) GCTAATTTTTGCCGC 1 MBIFOFBB_01163 ( 20) GAATATTTTTCCCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGWMTTTTTVCCGC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 28036 bayes= 11.7389 E= 1.0e+002 -982 165 59 -982 -38 7 133 -982 -38 -982 159 -132 62 -982 -982 100 62 107 -982 -132 -982 -982 -982 185 -982 -982 -982 185 -982 -93 -982 168 -982 -982 -982 185 -982 -982 -982 185 20 7 101 -982 -138 187 -982 -132 -982 187 -982 -32 -982 -982 218 -982 -982 224 -982 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGWMTTTTTVCCGC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 9 E= 1.0e+002 0.000000 0.666667 0.333333 0.000000 0.222222 0.222222 0.555556 0.000000 0.222222 0.000000 0.666667 0.111111 0.444444 0.000000 0.000000 0.555556 0.444444 0.444444 0.000000 0.111111 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.111111 0.000000 0.888889 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.333333 0.222222 0.444444 0.000000 0.111111 0.777778 0.000000 0.111111 0.000000 0.777778 0.000000 0.222222 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGWMTTTTTVCCGC MEME-2 regular expression -------------------------------------------------------------------------------- [CG][GAC][GA][TA][AC]TTTTT[GAC]C[CT]GC -------------------------------------------------------------------------------- Time 91.90 secs. ******************************************************************************** ******************************************************************************** MOTIF ACASCGHCGAAAAAGTYGTNG MEME-3 width = 21 sites = 21 llr = 259 E-value = 9.5e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACASCGHCGAAAAAGTYGTNG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 7:7:::3:2668771:11:33 pos.-specific C :8:6a:37121:11225:121 probability G 2223:a:1711:::62:9226 matrix T 1:11::32:12211164:73: bits 2.2 * 2.0 * 1.8 ** * 1.6 ** * Relative 1.3 * ** * Entropy 1.1 * ** * * * (17.8 bits) 0.9 * *** ** * * * 0.7 ****** ** ******** * 0.4 ****** ************ * 0.2 ******************* * 0.0 --------------------- Multilevel ACACCGACGAAAAAGTCGTAG consensus G G C C T GT GTA sequence T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACASCGHCGAAAAAGTYGTNG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- MBIFOFBB_00640 78 6.94e-09 GTGGTACAAC ACAGCGATGAAAAAGGCGGTG CT MBIFOFBB_00689 6 1.63e-08 AGGGT TGACCGACGAAAAAGCCGGAG CACTGATTAT MBIFOFBB_00763 12 6.75e-08 TCGGCGGAAG AGTCCGCCGAAAAAGTAGTGA CGCTCATCTC MBIFOFBB_05319 41 9.64e-08 GCTGTGTCGA ACACCGACCAAATAGTAGTTA TATTTACATA MBIFOFBB_05544 3 1.36e-07 TA ACACCGACGCCAATGGCGTCA TTACAGTGAC MBIFOFBB_01323 25 1.71e-07 AATTTTCTAA ACACCGTCACATAACTTGTTA GACCGTTACA MBIFOFBB_02392 55 2.12e-07 CTGGAGTGTA ACACCGTCAGAAACGTCGTGC TTTTACCTTC MBIFOFBB_03129 57 2.37e-07 TTCGGCGGTC GGTCCGCCGAAAAAATTGTTG ACGTACCTAA MBIFOFBB_05242 32 2.63e-07 ATAAGACACA ACAGCGTCGCATCAGGCGCTG CGGTGTATAC MBIFOFBB_00007 55 3.25e-07 GCTAACAGCG ACATCGTGGATAAACTTGTCG CTGAACTGTA MBIFOFBB_03254 55 3.60e-07 CAACTTCCGC AGACCGTCGATACCCTTGTCG GCGTCTTGTG MBIFOFBB_00548 70 8.71e-07 GACTTCGTTG GCGGCGCTGAGTAAGTCGGAG GAGTAATACA MBIFOFBB_05780 7 1.26e-06 GGTACG ACGGCGACGCTAACGGCATTG TGCATTTCCG MBIFOFBB_00462 14 1.37e-06 AACGGAGCAC ACATCGCCGGGTTAGCCGTGG GTTTAGCGAT MBIFOFBB_00547 40 2.11e-06 GTTAGCCTGA TCGCCTTCGACAAAGTCGTAA TGACTGCTGA MBIFOFBB_00537 12 2.11e-06 CACCTTTTCG GCATCGCCCTAAAATTCGGCG TCCTCATATT MBIFOFBB_00148 65 3.72e-06 AGTACTGGTG TGGCCGACCAAATTGTTGTAG GCCTCCTTGT MBIFOFBB_02546 15 4.02e-06 TCTCAATTAA ACACCGCCGCAAAGTGTAGGG AGTGAAATTA MBIFOFBB_05226 58 4.34e-06 TGATAACCTC GCACCGAGAAATCACCTGTAG ACGCGTTTAA MBIFOFBB_01758 59 5.85e-06 CGCTCATGAA ACAGCGCTATAAAAACTGTAA AAGCTGATGT MBIFOFBB_01312 71 8.94e-06 ATAACGGACA ACAGCGGTGATAAAGTAGCGC TCCTTTCTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACASCGHCGAAAAAGTYGTNG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MBIFOFBB_00640 6.9e-09 77_[+3]_2 MBIFOFBB_00689 1.6e-08 5_[+3]_74 MBIFOFBB_00763 6.7e-08 11_[+3]_68 MBIFOFBB_05319 9.6e-08 40_[+3]_39 MBIFOFBB_05544 1.4e-07 2_[+3]_77 MBIFOFBB_01323 1.7e-07 24_[+3]_55 MBIFOFBB_02392 2.1e-07 54_[+3]_25 MBIFOFBB_03129 2.4e-07 56_[+3]_23 MBIFOFBB_05242 2.6e-07 31_[+3]_48 MBIFOFBB_00007 3.2e-07 54_[+3]_25 MBIFOFBB_03254 3.6e-07 54_[+3]_25 MBIFOFBB_00548 8.7e-07 69_[+3]_10 MBIFOFBB_05780 1.3e-06 6_[+3]_73 MBIFOFBB_00462 1.4e-06 13_[+3]_66 MBIFOFBB_00547 2.1e-06 39_[+3]_40 MBIFOFBB_00537 2.1e-06 11_[+3]_68 MBIFOFBB_00148 3.7e-06 64_[+3]_15 MBIFOFBB_02546 4e-06 14_[+3]_65 MBIFOFBB_05226 4.3e-06 57_[+3]_22 MBIFOFBB_01758 5.9e-06 58_[+3]_21 MBIFOFBB_01312 8.9e-06 70_[+3]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACASCGHCGAAAAAGTYGTNG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACASCGHCGAAAAAGTYGTNG width=21 seqs=21 MBIFOFBB_00640 ( 78) ACAGCGATGAAAAAGGCGGTG 1 MBIFOFBB_00689 ( 6) TGACCGACGAAAAAGCCGGAG 1 MBIFOFBB_00763 ( 12) AGTCCGCCGAAAAAGTAGTGA 1 MBIFOFBB_05319 ( 41) ACACCGACCAAATAGTAGTTA 1 MBIFOFBB_05544 ( 3) ACACCGACGCCAATGGCGTCA 1 MBIFOFBB_01323 ( 25) ACACCGTCACATAACTTGTTA 1 MBIFOFBB_02392 ( 55) ACACCGTCAGAAACGTCGTGC 1 MBIFOFBB_03129 ( 57) GGTCCGCCGAAAAAATTGTTG 1 MBIFOFBB_05242 ( 32) ACAGCGTCGCATCAGGCGCTG 1 MBIFOFBB_00007 ( 55) ACATCGTGGATAAACTTGTCG 1 MBIFOFBB_03254 ( 55) AGACCGTCGATACCCTTGTCG 1 MBIFOFBB_00548 ( 70) GCGGCGCTGAGTAAGTCGGAG 1 MBIFOFBB_05780 ( 7) ACGGCGACGCTAACGGCATTG 1 MBIFOFBB_00462 ( 14) ACATCGCCGGGTTAGCCGTGG 1 MBIFOFBB_00547 ( 40) TCGCCTTCGACAAAGTCGTAA 1 MBIFOFBB_00537 ( 12) GCATCGCCCTAAAATTCGGCG 1 MBIFOFBB_00148 ( 65) TGGCCGACCAAATTGTTGTAG 1 MBIFOFBB_02546 ( 15) ACACCGCCGCAAAGTGTAGGG 1 MBIFOFBB_05226 ( 58) GCACCGAGAAATCACCTGTAG 1 MBIFOFBB_01758 ( 59) ACAGCGCTATAAAAACTGTAA 1 MBIFOFBB_01312 ( 71) ACAGCGGTGATAAAGTAGCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACASCGHCGAAAAAGTYGTNG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 26080 bayes= 10.5823 E= 9.5e+000 120 -1104 -21 -96 -1104 184 11 -1104 130 -1104 -21 -154 -1104 143 37 -96 -1104 224 -1104 -1104 -1104 -1104 211 -254 20 65 -221 4 -1104 175 -121 -54 -61 -57 159 -1104 98 17 -121 -154 109 -116 -121 -54 139 -1104 -1104 -22 130 -57 -1104 -96 130 -57 -221 -154 -160 -16 149 -154 -1104 -16 11 104 -102 117 -1104 46 -160 -1104 204 -1104 -1104 -116 11 127 -2 -16 11 4 -2 -116 149 -1104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACASCGHCGAAAAAGTYGTNG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 21 E= 9.5e+000 0.666667 0.000000 0.190476 0.142857 0.000000 0.761905 0.238095 0.000000 0.714286 0.000000 0.190476 0.095238 0.000000 0.571429 0.285714 0.142857 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.952381 0.047619 0.333333 0.333333 0.047619 0.285714 0.000000 0.714286 0.095238 0.190476 0.190476 0.142857 0.666667 0.000000 0.571429 0.238095 0.095238 0.095238 0.619048 0.095238 0.095238 0.190476 0.761905 0.000000 0.000000 0.238095 0.714286 0.142857 0.000000 0.142857 0.714286 0.142857 0.047619 0.095238 0.095238 0.190476 0.619048 0.095238 0.000000 0.190476 0.238095 0.571429 0.142857 0.476190 0.000000 0.380952 0.095238 0.000000 0.904762 0.000000 0.000000 0.095238 0.238095 0.666667 0.285714 0.190476 0.238095 0.285714 0.285714 0.095238 0.619048 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACASCGHCGAAAAAGTYGTNG MEME-3 regular expression -------------------------------------------------------------------------------- A[CG]A[CG]CG[ACT]CG[AC]A[AT]AAG[TG][CT]G[TG][ATG][GA] -------------------------------------------------------------------------------- Time 135.80 secs. ******************************************************************************** ******************************************************************************** MOTIF GCGTAAGCSRTSWMGKTCNSTTCTGCSAC MEME-4 width = 29 sites = 6 llr = 136 E-value = 1.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCGTAAGCSRTSWMGKTCNSTTCTGCSAC MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::258:::32233:2222:22:::::7: pos.-specific C 282:2::a5:25:52::82322a:285:7 probability G 828:22a:57232285::372:::8:522 matrix T :::82:::::5:5::38:3:57:a:2:22 bits 2.2 ** * 2.0 ** * 1.8 ** ** 1.6 *** ** * * **** Relative 1.3 *** ** * * * **** Entropy 1.1 **** ***** * ** * ***** (32.7 bits) 0.9 **** ***** * ** * ***** * 0.7 **** ***** * ** ** * ******** 0.4 **** ***** ******* * ******** 0.2 ****************** ********** 0.0 ----------------------------- Multilevel GCGTAAGCCGTCTCGGTCGGTTCTGCCAC consensus GA GAA T TC G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGTAAGCSRTSWMGKTCNSTTCTGCSAC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ----------------------------- MBIFOFBB_03237 37 1.39e-13 GCGGGCCATT GCGTTAGCCATCTAGGTCGCGTCTGCGAC TTTCGCTAGT MBIFOFBB_00640 15 3.08e-13 GCGCCACGGC GCGTGGGCGGTGACGGTCGGTTCTGCCAT TACGCGTCTT MBIFOFBB_05297 49 3.61e-11 AACGGAGGGG CCCTAAGCCGACTGGGTCTGTCCTCCGAC TTATTAGGCA MBIFOFBB_00570 3 1.25e-10 AA GCGTAAGCCGGAGCGTTCTGATCTGTCTG CGGACATTAA MBIFOFBB_02392 17 1.52e-10 TCCTACTCCC GCGAAAGCGGTCAACTTCACCACTGCCGC TGGAGTGTAA MBIFOFBB_03916 25 1.84e-10 TTTTTTGGCT GGGTCAGCGACGTCGAAACGTTCTGCGAC GCGCTTTCTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGTAAGCSRTSWMGKTCNSTTCTGCSAC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MBIFOFBB_03237 1.4e-13 36_[+4]_35 MBIFOFBB_00640 3.1e-13 14_[+4]_57 MBIFOFBB_05297 3.6e-11 48_[+4]_23 MBIFOFBB_00570 1.2e-10 2_[+4]_69 MBIFOFBB_02392 1.5e-10 16_[+4]_55 MBIFOFBB_03916 1.8e-10 24_[+4]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGTAAGCSRTSWMGKTCNSTTCTGCSAC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCGTAAGCSRTSWMGKTCNSTTCTGCSAC width=29 seqs=6 MBIFOFBB_03237 ( 37) GCGTTAGCCATCTAGGTCGCGTCTGCGAC 1 MBIFOFBB_00640 ( 15) GCGTGGGCGGTGACGGTCGGTTCTGCCAT 1 MBIFOFBB_05297 ( 49) CCCTAAGCCGACTGGGTCTGTCCTCCGAC 1 MBIFOFBB_00570 ( 3) GCGTAAGCCGGAGCGTTCTGATCTGTCTG 1 MBIFOFBB_02392 ( 17) GCGAAAGCGGTCAACTTCACCACTGCCGC 1 MBIFOFBB_03916 ( 25) GGGTCAGCGACGTCGAAACGTTCTGCGAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGTAAGCSRTSWMGKTCNSTTCTGCSAC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 23472 bayes= 11.5922 E= 1.2e+002 -923 -35 192 -923 -923 197 -40 -923 -923 -35 192 -923 -80 -923 -923 159 79 -35 -40 -73 152 -923 -40 -923 -923 -923 218 -923 -923 223 -923 -923 -923 124 118 -923 20 -923 159 -923 -80 -35 -40 85 -80 124 59 -923 20 -923 -40 85 20 124 -40 -923 -923 -35 192 -923 -80 -923 118 27 -80 -923 -923 159 -80 197 -923 -923 -80 -35 59 27 -923 65 159 -923 -80 -35 -40 85 -80 -35 -923 126 -923 223 -923 -923 -923 -923 -923 185 -923 -35 192 -923 -923 197 -923 -73 -923 124 118 -923 120 -923 -40 -73 -923 165 -40 -73 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGTAAGCSRTSWMGKTCNSTTCTGCSAC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 6 E= 1.2e+002 0.000000 0.166667 0.833333 0.000000 0.000000 0.833333 0.166667 0.000000 0.000000 0.166667 0.833333 0.000000 0.166667 0.000000 0.000000 0.833333 0.500000 0.166667 0.166667 0.166667 0.833333 0.000000 0.166667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.333333 0.000000 0.666667 0.000000 0.166667 0.166667 0.166667 0.500000 0.166667 0.500000 0.333333 0.000000 0.333333 0.000000 0.166667 0.500000 0.333333 0.500000 0.166667 0.000000 0.000000 0.166667 0.833333 0.000000 0.166667 0.000000 0.500000 0.333333 0.166667 0.000000 0.000000 0.833333 0.166667 0.833333 0.000000 0.000000 0.166667 0.166667 0.333333 0.333333 0.000000 0.333333 0.666667 0.000000 0.166667 0.166667 0.166667 0.500000 0.166667 0.166667 0.000000 0.666667 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.166667 0.833333 0.000000 0.000000 0.833333 0.000000 0.166667 0.000000 0.500000 0.500000 0.000000 0.666667 0.000000 0.166667 0.166667 0.000000 0.666667 0.166667 0.166667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGTAAGCSRTSWMGKTCNSTTCTGCSAC MEME-4 regular expression -------------------------------------------------------------------------------- GCGTAAGC[CG][GA]T[CG][TA][CA]G[GT]TC[GT][GC]TTCTGC[CG]AC -------------------------------------------------------------------------------- Time 179.11 secs. ******************************************************************************** ******************************************************************************** MOTIF KWWTAAWWWHAWTYWTYTATDAAWTWWW MEME-5 width = 28 sites = 21 llr = 287 E-value = 4.7e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif KWWTAAWWWHAWTYWTYTATDAAWTWWW MEME-5 Description -------------------------------------------------------------------------------- Simplified A 14428a3442932132:18:37932467 pos.-specific C ::::::1213::22::421:1::::::: probability G 412:::::2::::212::1:3::2::1: matrix T 55482:632416656657:a33158633 bits 2.2 2.0 1.8 * 1.6 * * Relative 1.3 * * Entropy 1.1 * * * * * * (19.7 bits) 0.9 *** * **** ** ** * 0.7 * *** *** **** ** ** * 0.4 ******* *** ****** ******* 0.2 ******** *********** ******* 0.0 ---------------------------- Multilevel TTTTAATAATATTTTTTTATAAATTTAA consensus GAAA ATTC A CA C GT AAATT sequence A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KWWTAAWWWHAWTYWTYTATDAAWTWWW MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------------------- MBIFOFBB_04324 1 8.93e-12 . GATTAATAACATTTTTTCATTAATTTAA GTTGGCTAAA MBIFOFBB_04464 60 1.28e-09 TTGTAATTTT TTTAAATATTATTTTTCCATGAATAAAA TTGGAGTAAG MBIFOFBB_04820 58 2.37e-09 TTAATGCTAA GATTAATACCATATTGTTATAAATTAAT GCTGAGATTG MBIFOFBB_03693 18 9.54e-09 TACAAGATAT TTTTTATAACAATCATTAATTAATTTAA AAATCTTTAA MBIFOFBB_02177 23 4.05e-08 ATTTAGATTC GTAAAAATCTAATGTTCTATTAAAAAAA ATCCAGTTAC MBIFOFBB_03133 19 5.63e-08 TTGCTTTAAT TGTTAATAATATTTTGCAATCAAGTTAT CATAATCAAA MBIFOFBB_00544 58 6.26e-08 TGGGTCTGAG GAGTAATCATTTTCGTTTATAAAATAAT TGGAGCTCTG MBIFOFBB_01773 45 1.41e-07 ACTAACTGGT TTAAAAATAAAATTGATTATATATTTAT AATTAATCTT MBIFOFBB_00619 6 1.88e-07 TCTCG TTGTAACGACATCTAACTATAAATTATA TAATCGCATT MBIFOFBB_01463 70 2.06e-07 AAATAAAATT GATTTATTGCATCCATTCATGAAGAAAA CAG MBIFOFBB_01212 70 2.95e-07 ATCAAATCTC AAATGAATTAAATCTTTTATGAATTTAT TGA MBIFOFBB_01194 20 3.83e-07 TGGGTGTTCT TAGTAAAAAGATTTTGTTATGTAAATGA AATAAACAGT MBIFOFBB_04009 70 4.92e-07 ATTGTGATGC TTTTAACAGTATTTACCTGTAAAATTGA ATA MBIFOFBB_02374 48 4.92e-07 TGGTGCGAAA TTATAATAAAAAACAGTTCTGATTTTTA TAAAACACTC MBIFOFBB_03464 34 6.79e-07 AGGTATAACT TTGAAAATGCACATAATTATGAATTTTA ACGCTCGGCC MBIFOFBB_04632 58 7.34e-07 TAAAGTGGAA ATTTTATCTTAATTTTCTCTTTTTTTAA GAGGCACCTT MBIFOFBB_00256 53 9.23e-07 CACGTTCTAA GTATAAATATATCATTATATATTTTAAT ATATATTAAC MBIFOFBB_02818 72 9.94e-07 ATTGTCCAAC TAATAATTCTATAATTCCACTAAATTTA G MBIFOFBB_03211 4 1.53e-06 AAT TTTTTATCTTTTTGATTTATAAAGATCT GATTGAAGAA MBIFOFBB_05037 7 1.75e-06 GAAAAA GAATAAAATATACGTACTATTTAGTATA AGAGCTCCTA MBIFOFBB_02615 44 2.14e-06 ACATAGGTTA GGAAAATCGAATTGTTCTGTCTAATATA TTAATAATCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KWWTAAWWWHAWTYWTYTATDAAWTWWW MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MBIFOFBB_04324 8.9e-12 [+5]_72 MBIFOFBB_04464 1.3e-09 59_[+5]_13 MBIFOFBB_04820 2.4e-09 57_[+5]_15 MBIFOFBB_03693 9.5e-09 17_[+5]_55 MBIFOFBB_02177 4.1e-08 22_[+5]_50 MBIFOFBB_03133 5.6e-08 18_[+5]_54 MBIFOFBB_00544 6.3e-08 57_[+5]_15 MBIFOFBB_01773 1.4e-07 44_[+5]_28 MBIFOFBB_00619 1.9e-07 5_[+5]_67 MBIFOFBB_01463 2.1e-07 69_[+5]_3 MBIFOFBB_01212 3e-07 69_[+5]_3 MBIFOFBB_01194 3.8e-07 19_[+5]_53 MBIFOFBB_04009 4.9e-07 69_[+5]_3 MBIFOFBB_02374 4.9e-07 47_[+5]_25 MBIFOFBB_03464 6.8e-07 33_[+5]_39 MBIFOFBB_04632 7.3e-07 57_[+5]_15 MBIFOFBB_00256 9.2e-07 52_[+5]_20 MBIFOFBB_02818 9.9e-07 71_[+5]_1 MBIFOFBB_03211 1.5e-06 3_[+5]_69 MBIFOFBB_05037 1.8e-06 6_[+5]_66 MBIFOFBB_02615 2.1e-06 43_[+5]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KWWTAAWWWHAWTYWTYTATDAAWTWWW MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KWWTAAWWWHAWTYWTYTATDAAWTWWW width=28 seqs=21 MBIFOFBB_04324 ( 1) GATTAATAACATTTTTTCATTAATTTAA 1 MBIFOFBB_04464 ( 60) TTTAAATATTATTTTTCCATGAATAAAA 1 MBIFOFBB_04820 ( 58) GATTAATACCATATTGTTATAAATTAAT 1 MBIFOFBB_03693 ( 18) TTTTTATAACAATCATTAATTAATTTAA 1 MBIFOFBB_02177 ( 23) GTAAAAATCTAATGTTCTATTAAAAAAA 1 MBIFOFBB_03133 ( 19) TGTTAATAATATTTTGCAATCAAGTTAT 1 MBIFOFBB_00544 ( 58) GAGTAATCATTTTCGTTTATAAAATAAT 1 MBIFOFBB_01773 ( 45) TTAAAAATAAAATTGATTATATATTTAT 1 MBIFOFBB_00619 ( 6) TTGTAACGACATCTAACTATAAATTATA 1 MBIFOFBB_01463 ( 70) GATTTATTGCATCCATTCATGAAGAAAA 1 MBIFOFBB_01212 ( 70) AAATGAATTAAATCTTTTATGAATTTAT 1 MBIFOFBB_01194 ( 20) TAGTAAAAAGATTTTGTTATGTAAATGA 1 MBIFOFBB_04009 ( 70) TTTTAACAGTATTTACCTGTAAAATTGA 1 MBIFOFBB_02374 ( 48) TTATAATAAAAAACAGTTCTGATTTTTA 1 MBIFOFBB_03464 ( 34) TTGAAAATGCACATAATTATGAATTTTA 1 MBIFOFBB_04632 ( 58) ATTTTATCTTAATTTTCTCTTTTTTTAA 1 MBIFOFBB_00256 ( 53) GTATAAATATATCATTATATATTTTAAT 1 MBIFOFBB_02818 ( 72) TAATAATTCTATAATTCCACTAAATTTA 1 MBIFOFBB_03211 ( 4) TTTTTATCTTTTTGATTTATAAAGATCT 1 MBIFOFBB_05037 ( 7) GAATAAAATATACGTACTATTTAGTATA 1 MBIFOFBB_02615 ( 44) GGAAAATCGAATTGTTCTGTCTAATATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KWWTAAWWWHAWTYWTYTATDAAWTWWW MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 28 n= 23798 bayes= 11.1319 E= 4.7e+000 -160 -1104 79 92 39 -1104 -121 92 39 -1104 -21 63 -28 -1104 -1104 146 139 -1104 -221 -54 179 -1104 -1104 -1104 20 -116 -1104 104 56 -16 -221 27 56 -57 -21 -22 -28 43 -221 63 156 -1104 -1104 -96 20 -215 -1104 116 -61 -16 -1104 116 -160 17 -21 78 20 -1104 -121 104 -61 -215 -21 104 -260 101 -1104 92 -160 -16 -1104 136 148 -116 -121 -1104 -1104 -215 -1104 178 20 -116 37 4 130 -1104 -1104 4 156 -1104 -1104 -96 -2 -1104 -21 92 -28 -1104 -1104 146 56 -1104 -1104 104 98 -215 -121 4 120 -1104 -1104 27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KWWTAAWWWHAWTYWTYTATDAAWTWWW MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 28 nsites= 21 E= 4.7e+000 0.095238 0.000000 0.380952 0.523810 0.380952 0.000000 0.095238 0.523810 0.380952 0.000000 0.190476 0.428571 0.238095 0.000000 0.000000 0.761905 0.761905 0.000000 0.047619 0.190476 1.000000 0.000000 0.000000 0.000000 0.333333 0.095238 0.000000 0.571429 0.428571 0.190476 0.047619 0.333333 0.428571 0.142857 0.190476 0.238095 0.238095 0.285714 0.047619 0.428571 0.857143 0.000000 0.000000 0.142857 0.333333 0.047619 0.000000 0.619048 0.190476 0.190476 0.000000 0.619048 0.095238 0.238095 0.190476 0.476190 0.333333 0.000000 0.095238 0.571429 0.190476 0.047619 0.190476 0.571429 0.047619 0.428571 0.000000 0.523810 0.095238 0.190476 0.000000 0.714286 0.809524 0.095238 0.095238 0.000000 0.000000 0.047619 0.000000 0.952381 0.333333 0.095238 0.285714 0.285714 0.714286 0.000000 0.000000 0.285714 0.857143 0.000000 0.000000 0.142857 0.285714 0.000000 0.190476 0.523810 0.238095 0.000000 0.000000 0.761905 0.428571 0.000000 0.000000 0.571429 0.571429 0.047619 0.095238 0.285714 0.666667 0.000000 0.000000 0.333333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KWWTAAWWWHAWTYWTYTATDAAWTWWW MEME-5 regular expression -------------------------------------------------------------------------------- [TG][TA][TA][TA]AA[TA][AT][AT][TCA]A[TA]T[TC][TA]T[TC]TAT[AGT][AT]A[TA][TA][TA][AT][AT] -------------------------------------------------------------------------------- Time 222.03 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MBIFOFBB_00003 3.69e-01 100 MBIFOFBB_00004 1.68e-03 6_[+2(3.95e-08)]_79 MBIFOFBB_00005 4.75e-01 100 MBIFOFBB_00006 5.25e-01 100 MBIFOFBB_00007 5.44e-04 54_[+3(3.25e-07)]_25 MBIFOFBB_00008 6.03e-01 100 MBIFOFBB_00009 5.62e-01 100 MBIFOFBB_00010 6.16e-01 100 MBIFOFBB_00011 8.27e-01 100 MBIFOFBB_00033 3.73e-01 100 MBIFOFBB_00044 4.94e-01 100 MBIFOFBB_00056 1.18e-03 10_[+5(2.35e-05)]_62 MBIFOFBB_00082 4.93e-01 100 MBIFOFBB_00148 9.51e-03 64_[+3(3.72e-06)]_15 MBIFOFBB_00165 5.11e-01 100 MBIFOFBB_00193 7.37e-01 100 MBIFOFBB_00201 3.05e-01 100 MBIFOFBB_00205 6.96e-01 100 MBIFOFBB_00206 4.02e-01 100 MBIFOFBB_00235 6.15e-01 100 MBIFOFBB_00241 2.48e-01 100 MBIFOFBB_00250 9.14e-02 100 MBIFOFBB_00256 1.46e-02 52_[+5(9.23e-07)]_20 MBIFOFBB_00281 8.13e-01 100 MBIFOFBB_00324 6.06e-01 100 MBIFOFBB_00354 8.23e-01 100 MBIFOFBB_00380 8.18e-01 100 MBIFOFBB_00381 1.14e-01 100 MBIFOFBB_00419 4.69e-01 100 MBIFOFBB_00442 4.59e-01 100 MBIFOFBB_00462 3.51e-04 13_[+3(1.37e-06)]_66 MBIFOFBB_00463 6.78e-01 100 MBIFOFBB_00468 9.53e-02 100 MBIFOFBB_00479 4.80e-01 100 MBIFOFBB_00480 7.72e-01 100 MBIFOFBB_00503 2.20e-01 100 MBIFOFBB_00537 5.75e-03 11_[+3(2.11e-06)]_68 MBIFOFBB_00538 6.24e-01 100 MBIFOFBB_00539 2.04e-01 100 MBIFOFBB_00540 8.69e-01 100 MBIFOFBB_00544 3.42e-04 57_[+5(6.26e-08)]_15 MBIFOFBB_00545 2.02e-01 100 MBIFOFBB_00546 6.25e-01 100 MBIFOFBB_00547 1.76e-03 39_[+3(2.11e-06)]_40 MBIFOFBB_00548 1.33e-03 69_[+3(8.71e-07)]_10 MBIFOFBB_00549 8.49e-01 100 MBIFOFBB_00550 2.03e-01 100 MBIFOFBB_00551 2.53e-01 100 MBIFOFBB_00552 6.96e-02 100 MBIFOFBB_00553 9.67e-01 100 MBIFOFBB_00554 6.25e-01 100 MBIFOFBB_00555 3.01e-01 100 MBIFOFBB_00556 2.41e-01 100 MBIFOFBB_00557 9.34e-01 100 MBIFOFBB_00558 1.26e-01 100 MBIFOFBB_00559 9.06e-01 100 MBIFOFBB_00560 1.15e-01 100 MBIFOFBB_00561 5.19e-01 100 MBIFOFBB_00562 5.57e-01 100 MBIFOFBB_00563 1.33e-01 100 MBIFOFBB_00564 7.56e-02 100 MBIFOFBB_00566 1.57e-06 55_[+1(3.24e-10)]_17 MBIFOFBB_00567 9.58e-01 100 MBIFOFBB_00568 3.42e-02 100 MBIFOFBB_00569 1.07e-05 25_[+1(5.51e-10)]_47 MBIFOFBB_00570 1.31e-05 2_[+4(1.25e-10)]_69 MBIFOFBB_00571 8.42e-01 100 MBIFOFBB_00573 6.42e-01 100 MBIFOFBB_00600 4.14e-01 100 MBIFOFBB_00603 4.32e-10 20_[+1(3.62e-14)]_52 MBIFOFBB_00605 3.81e-02 37_[+4(1.20e-05)]_34 MBIFOFBB_00619 4.43e-03 5_[+5(1.88e-07)]_67 MBIFOFBB_00631 4.38e-01 100 MBIFOFBB_00632 8.39e-01 100 MBIFOFBB_00636 9.51e-01 100 MBIFOFBB_00640 4.96e-13 14_[+4(3.08e-13)]_34_[+3(6.94e-09)]_\ 2 MBIFOFBB_00655 7.28e-01 100 MBIFOFBB_00667 6.90e-01 100 MBIFOFBB_00669 2.09e-01 100 MBIFOFBB_00671 7.31e-02 100 MBIFOFBB_00672 1.27e-01 100 MBIFOFBB_00676 6.32e-02 100 MBIFOFBB_00688 9.12e-01 100 MBIFOFBB_00689 2.19e-05 5_[+3(1.63e-08)]_74 MBIFOFBB_00692 7.90e-01 100 MBIFOFBB_00730 1.84e-01 100 MBIFOFBB_00741 5.74e-01 100 MBIFOFBB_00746 2.37e-01 100 MBIFOFBB_00752 7.03e-01 100 MBIFOFBB_00763 1.24e-04 11_[+3(6.75e-08)]_68 MBIFOFBB_00775 6.69e-04 61_[+2(2.63e-07)]_24 MBIFOFBB_00782 8.46e-01 100 MBIFOFBB_00786 2.93e-01 100 MBIFOFBB_00790 2.78e-01 100 MBIFOFBB_00792 2.31e-01 100 MBIFOFBB_00797 2.16e-01 100 MBIFOFBB_00801 6.84e-01 100 MBIFOFBB_00827 4.84e-02 100 MBIFOFBB_00901 7.33e-01 100 MBIFOFBB_00902 8.92e-01 100 MBIFOFBB_00918 3.76e-01 100 MBIFOFBB_00931 5.87e-02 100 MBIFOFBB_00937 7.57e-01 100 MBIFOFBB_00981 6.26e-01 100 MBIFOFBB_01032 3.84e-02 100 MBIFOFBB_01034 2.64e-01 100 MBIFOFBB_01064 1.13e-01 54_[+5(9.77e-05)]_18 MBIFOFBB_01067 3.14e-02 100 MBIFOFBB_01137 5.25e-01 100 MBIFOFBB_01138 6.81e-01 100 MBIFOFBB_01146 8.76e-01 100 MBIFOFBB_01163 3.21e-04 19_[+2(4.45e-07)]_66 MBIFOFBB_01168 4.41e-01 100 MBIFOFBB_01170 9.98e-01 100 MBIFOFBB_01194 5.99e-03 19_[+5(3.83e-07)]_53 MBIFOFBB_01206 4.07e-01 100 MBIFOFBB_01212 2.24e-03 69_[+5(2.95e-07)]_3 MBIFOFBB_01215 3.01e-01 100 MBIFOFBB_01227 1.24e-05 35_[+2(4.68e-08)]_50 MBIFOFBB_01268 5.35e-01 100 MBIFOFBB_01271 2.15e-01 100 MBIFOFBB_01296 2.05e-01 100 MBIFOFBB_01300 7.39e-01 100 MBIFOFBB_01312 4.04e-02 70_[+3(8.94e-06)]_9 MBIFOFBB_01323 1.87e-03 24_[+3(1.71e-07)]_55 MBIFOFBB_01337 5.19e-01 100 MBIFOFBB_01339 3.70e-01 100 MBIFOFBB_01343 4.79e-01 100 MBIFOFBB_01388 7.22e-05 53_[+2(1.11e-07)]_32 MBIFOFBB_01445 1.71e-03 66_[+2(3.95e-08)]_19 MBIFOFBB_01463 1.23e-04 69_[+5(2.06e-07)]_3 MBIFOFBB_01505 9.54e-01 100 MBIFOFBB_01535 2.33e-01 100 MBIFOFBB_01536 8.11e-01 100 MBIFOFBB_01646 2.20e-01 100 MBIFOFBB_01684 4.99e-01 100 MBIFOFBB_01697 1.67e-01 100 MBIFOFBB_01744 3.85e-02 100 MBIFOFBB_01758 3.20e-03 58_[+3(5.85e-06)]_21 MBIFOFBB_01773 2.68e-03 44_[+5(1.41e-07)]_28 MBIFOFBB_01779 2.21e-01 100 MBIFOFBB_01790 5.33e-01 100 MBIFOFBB_01809 4.26e-02 100 MBIFOFBB_01827 6.47e-01 100 MBIFOFBB_01910 9.71e-01 100 MBIFOFBB_01921 9.47e-01 100 MBIFOFBB_02034 1.49e-01 100 MBIFOFBB_02040 2.97e-01 100 MBIFOFBB_02065 1.61e-01 100 MBIFOFBB_02066 4.38e-01 100 MBIFOFBB_02154 9.36e-01 100 MBIFOFBB_02155 8.69e-01 100 MBIFOFBB_02177 4.40e-03 22_[+5(4.05e-08)]_50 MBIFOFBB_02279 2.56e-01 100 MBIFOFBB_02345 8.31e-01 100 MBIFOFBB_02357 5.99e-01 100 MBIFOFBB_02374 6.23e-03 47_[+5(4.92e-07)]_25 MBIFOFBB_02392 4.25e-10 16_[+4(1.52e-10)]_9_[+3(2.12e-07)]_\ 25 MBIFOFBB_02402 7.10e-01 100 MBIFOFBB_02430 5.01e-01 100 MBIFOFBB_02486 8.11e-01 100 MBIFOFBB_02487 5.14e-01 100 MBIFOFBB_02488 9.10e-02 100 MBIFOFBB_02546 1.06e-02 14_[+3(4.02e-06)]_65 MBIFOFBB_02547 7.24e-01 100 MBIFOFBB_02554 7.20e-01 100 MBIFOFBB_02557 5.88e-01 100 MBIFOFBB_02564 3.47e-01 100 MBIFOFBB_02588 2.15e-01 100 MBIFOFBB_02590 5.17e-01 100 MBIFOFBB_02615 2.32e-03 43_[+5(2.14e-06)]_29 MBIFOFBB_02616 5.43e-01 100 MBIFOFBB_02626 8.78e-02 100 MBIFOFBB_02788 7.05e-01 100 MBIFOFBB_02789 3.82e-01 100 MBIFOFBB_02792 5.34e-01 100 MBIFOFBB_02816 3.62e-01 100 MBIFOFBB_02818 1.44e-02 71_[+5(9.94e-07)]_1 MBIFOFBB_02883 7.00e-01 100 MBIFOFBB_03007 4.19e-01 100 MBIFOFBB_03014 7.30e-01 100 MBIFOFBB_03020 6.75e-01 100 MBIFOFBB_03025 4.31e-01 100 MBIFOFBB_03039 9.70e-01 100 MBIFOFBB_03107 6.77e-01 100 MBIFOFBB_03118 4.98e-01 100 MBIFOFBB_03123 6.82e-01 100 MBIFOFBB_03129 2.22e-03 56_[+3(2.37e-07)]_23 MBIFOFBB_03133 5.34e-04 18_[+5(5.63e-08)]_54 MBIFOFBB_03171 7.76e-02 70_[+2(3.51e-05)]_15 MBIFOFBB_03181 1.77e-01 100 MBIFOFBB_03189 3.00e-01 100 MBIFOFBB_03192 2.55e-01 100 MBIFOFBB_03208 2.40e-01 100 MBIFOFBB_03211 2.84e-02 3_[+5(1.53e-06)]_69 MBIFOFBB_03215 2.46e-03 52_[+2(3.86e-07)]_33 MBIFOFBB_03229 2.19e-01 100 MBIFOFBB_03235 6.04e-01 100 MBIFOFBB_03237 1.50e-08 36_[+4(1.39e-13)]_35 MBIFOFBB_03246 5.90e-02 100 MBIFOFBB_03254 9.60e-04 54_[+3(3.60e-07)]_25 MBIFOFBB_03313 5.07e-01 100 MBIFOFBB_03383 6.43e-01 100 MBIFOFBB_03462 6.56e-01 100 MBIFOFBB_03464 1.82e-03 33_[+5(6.79e-07)]_39 MBIFOFBB_03499 8.10e-01 100 MBIFOFBB_03500 1.70e-01 100 MBIFOFBB_03501 4.52e-01 100 MBIFOFBB_03685 3.21e-01 100 MBIFOFBB_03690 2.02e-06 7_[+1(1.54e-10)]_65 MBIFOFBB_03693 1.64e-04 17_[+5(9.54e-09)]_55 MBIFOFBB_03705 1.53e-06 22_[+1(5.12e-10)]_50 MBIFOFBB_03715 9.46e-01 100 MBIFOFBB_03737 8.14e-01 100 MBIFOFBB_03790 2.70e-02 100 MBIFOFBB_03808 8.69e-01 100 MBIFOFBB_03829 6.75e-01 100 MBIFOFBB_03841 2.88e-01 100 MBIFOFBB_03913 4.67e-01 100 MBIFOFBB_03916 2.38e-06 24_[+4(1.84e-10)]_47 MBIFOFBB_04008 8.79e-02 35_[+5(6.99e-05)]_37 MBIFOFBB_04009 1.25e-02 69_[+5(4.92e-07)]_3 MBIFOFBB_04080 4.25e-01 100 MBIFOFBB_04100 4.18e-01 100 MBIFOFBB_04105 7.03e-01 100 MBIFOFBB_04181 3.46e-01 100 MBIFOFBB_04193 4.74e-01 100 MBIFOFBB_04200 8.78e-01 100 MBIFOFBB_04220 1.40e-01 100 MBIFOFBB_04241 2.60e-01 100 MBIFOFBB_04324 1.29e-07 [+5(8.93e-12)]_72 MBIFOFBB_04371 7.98e-01 100 MBIFOFBB_04420 5.83e-01 100 MBIFOFBB_04453 5.65e-02 100 MBIFOFBB_04464 1.28e-04 59_[+5(1.28e-09)]_13 MBIFOFBB_04482 6.37e-01 100 MBIFOFBB_04489 4.97e-01 100 MBIFOFBB_04507 2.53e-01 100 MBIFOFBB_04568 8.86e-01 100 MBIFOFBB_04570 6.20e-01 100 MBIFOFBB_04588 2.73e-02 100 MBIFOFBB_04610 8.61e-02 100 MBIFOFBB_04616 4.40e-01 100 MBIFOFBB_04632 1.79e-02 57_[+5(7.34e-07)]_15 MBIFOFBB_04664 1.65e-01 100 MBIFOFBB_04667 2.98e-01 100 MBIFOFBB_04672 1.68e-01 100 MBIFOFBB_04688 2.25e-07 11_[+1(5.14e-11)]_61 MBIFOFBB_04733 3.41e-01 100 MBIFOFBB_04735 9.22e-01 100 MBIFOFBB_04736 3.11e-01 100 MBIFOFBB_04743 2.42e-01 100 MBIFOFBB_04750 4.46e-01 100 MBIFOFBB_04769 9.08e-01 100 MBIFOFBB_04774 3.20e-01 100 MBIFOFBB_04798 6.43e-01 100 MBIFOFBB_04804 7.74e-01 100 MBIFOFBB_04805 7.76e-01 100 MBIFOFBB_04820 8.59e-05 57_[+5(2.37e-09)]_15 MBIFOFBB_04823 9.67e-01 100 MBIFOFBB_04829 6.27e-01 100 MBIFOFBB_04863 7.00e-01 100 MBIFOFBB_04903 9.06e-01 100 MBIFOFBB_04910 8.41e-01 100 MBIFOFBB_04928 4.15e-01 100 MBIFOFBB_04933 2.11e-01 100 MBIFOFBB_04948 6.41e-01 100 MBIFOFBB_04949 7.22e-01 100 MBIFOFBB_04973 2.40e-03 82_[+2(4.13e-07)]_3 MBIFOFBB_05003 3.95e-01 100 MBIFOFBB_05034 4.58e-01 100 MBIFOFBB_05037 1.24e-02 6_[+5(1.75e-06)]_66 MBIFOFBB_05053 2.01e-01 100 MBIFOFBB_05091 5.47e-01 100 MBIFOFBB_05098 3.21e-01 100 MBIFOFBB_05126 5.39e-01 100 MBIFOFBB_05131 7.41e-02 45_[+4(2.51e-05)]_26 MBIFOFBB_05146 2.22e-08 25_[+1(2.76e-10)]_47 MBIFOFBB_05160 6.52e-01 100 MBIFOFBB_05176 6.48e-02 100 MBIFOFBB_05192 1.88e-06 27_[+1(1.11e-09)]_45 MBIFOFBB_05196 4.05e-01 100 MBIFOFBB_05226 8.17e-03 57_[+3(4.34e-06)]_22 MBIFOFBB_05242 2.59e-05 31_[+3(2.63e-07)]_48 MBIFOFBB_05250 5.51e-01 100 MBIFOFBB_05252 1.86e-01 100 MBIFOFBB_05255 8.44e-06 67_[+2(3.95e-08)]_18 MBIFOFBB_05257 9.64e-01 100 MBIFOFBB_05280 7.55e-01 100 MBIFOFBB_05284 4.14e-01 100 MBIFOFBB_05294 1.63e-01 100 MBIFOFBB_05295 6.31e-01 100 MBIFOFBB_05297 4.76e-07 48_[+4(3.61e-11)]_23 MBIFOFBB_05306 2.25e-02 22_[+3(9.14e-05)]_57 MBIFOFBB_05319 9.80e-04 40_[+3(9.64e-08)]_39 MBIFOFBB_05350 6.03e-01 100 MBIFOFBB_05396 8.34e-03 27_[+4(1.11e-05)]_44 MBIFOFBB_05438 9.32e-01 100 MBIFOFBB_05475 2.63e-01 100 MBIFOFBB_05498 9.21e-01 100 MBIFOFBB_05508 7.55e-01 100 MBIFOFBB_05538 9.33e-02 100 MBIFOFBB_05539 2.43e-01 100 MBIFOFBB_05540 3.54e-01 100 MBIFOFBB_05541 8.51e-01 100 MBIFOFBB_05542 3.66e-01 100 MBIFOFBB_05543 6.97e-01 100 MBIFOFBB_05544 1.11e-03 2_[+3(1.36e-07)]_77 MBIFOFBB_05546 3.94e-01 100 MBIFOFBB_05560 3.92e-01 100 MBIFOFBB_05564 8.85e-01 100 MBIFOFBB_05586 5.18e-01 100 MBIFOFBB_05592 6.43e-03 21_[+3(3.97e-05)]_58 MBIFOFBB_05594 5.58e-01 100 MBIFOFBB_05634 3.91e-01 100 MBIFOFBB_05651 3.00e-01 100 MBIFOFBB_05664 9.66e-01 100 MBIFOFBB_05673 7.60e-01 100 MBIFOFBB_05693 7.36e-01 100 MBIFOFBB_05705 2.08e-01 68_[+2(7.01e-05)]_17 MBIFOFBB_05756 7.90e-01 100 MBIFOFBB_05764 7.27e-01 100 MBIFOFBB_05773 1.65e-01 100 MBIFOFBB_05778 7.10e-01 100 MBIFOFBB_05780 7.75e-03 6_[+3(1.26e-06)]_73 MBIFOFBB_05790 9.86e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: kodomo ********************************************************************************