MAST - Motif Alignment and Search Tool
MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)
For further information on how to interpret these results or to get
a copy of the MAST software please access http://meme.nbcr.net.
REFERENCE
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
DATABASE AND MOTIFS
DATABASE ./seed.fasta (peptide)
Last updated on Fri May 10 17:16:53 2013
Database contains 25 sequences, 5305 residues
MOTIFS ./meme.txt (peptide)
MOTIF WIDTH BEST POSSIBLE MATCH
----- ----- -------------------
1 46 IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
2 37 YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK
3 41 PDNPYWKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
PAIRWISE MOTIF CORRELATIONS:
MOTIF 1 2
----- ----- -----
2 0.14
3 0.12 0.12
No overly similar pairs (correlation > 0.60) found.
Random model letter frequencies (from non-redundant database):
A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
W 0.013 Y 0.033
SECTION I: HIGH-SCORING SEQUENCES
- Each of the following 25 sequences has E-value less than 10.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
- finding the score of the single best match of each motif
to the sequence (best matches may overlap),
- calculating the sequence p-value of each score,
- forming the product of the p-values,
- taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
| Links | Sequence Name | Description | E-value | Length
|
|---|
|
| TENA_BACSU/8-215
|
| 2.6e-68
| 208
|
|
| O25874_HELPY/8-216
|
| 3.8e-61
| 209
|
|
| THI22_SCHPO/330-539
|
| 6.2e-54
| 210
|
|
| Y358_HAEIN/6-214
|
| 2.6e-52
| 209
|
|
| THI20_YEAST/340-550
|
| 2.9e-42
| 211
|
|
| Q9UZQ1_PYRAB/7-210
|
| 3.3e-42
| 204
|
|
| Q9YEA4_AERPE/12-219
|
| 8.7e-36
| 208
|
|
| THI22_YEAST/361-571
|
| 9.6e-33
| 211
|
|
| Q9UZQ2_PYRAB/9-210
|
| 1.5e-19
| 202
|
|
| O58874_PYRHO/9-210
|
| 3.3e-18
| 202
|
|
| TENA_STACT/8-218
|
| 2.9e-14
| 211
|
|
| O60018_PICAN/332-587
|
| 5.2e-14
| 256
|
|
| THI21_SCHPO/298-502
|
| 9.1e-14
| 205
|
|
| PM36_SOYBN/19-228
|
| 2.1e-07
| 210
|
|
| PQQC_ACICA/14-225
|
| 0.023
| 212
|
|
| PQQC_PSEAE/12-223
|
| 0.045
| 212
|
|
| PQQCL_CHLTR/9-226
|
| 0.051
| 218
|
|
| PQQCL_CHLPN/5-222
|
| 0.079
| 218
|
|
| Q96XA8_SULTO/68-288
|
| 0.19
| 221
|
|
| PQQC_GLUOX/10-222
|
| 0.49
| 213
|
|
| PQQC_RHIME/11-223
|
| 0.56
| 213
|
|
| PQQC_XANAC/11-223
|
| 1.1
| 213
|
|
| Q9HJM8_THEAC/69-287
|
| 1.2
| 219
|
|
| P95864_SULSF/8-205
|
| 1.7
| 198
|
|
| PQQC_KLEPN/13-224
|
| 2
| 212
|
SECTION II: MOTIF DIAGRAMS
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- occurrence of motif `n' with p-value less than 0.0001.
- Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.
| Links | Name | Expect | Motifs
|
|---|
|
| TENA_BACSU/8-215
| 2.6e-68
|
|
|
| O25874_HELPY/8-216
| 3.8e-61
|
|
|
| THI22_SCHPO/330-539
| 6.2e-54
|
|
|
| Y358_HAEIN/6-214
| 2.6e-52
|
|
|
| THI20_YEAST/340-550
| 2.9e-42
|
|
|
| Q9UZQ1_PYRAB/7-210
| 3.3e-42
|
|
|
| Q9YEA4_AERPE/12-219
| 8.7e-36
|
|
|
| THI22_YEAST/361-571
| 9.6e-33
|
|
|
| Q9UZQ2_PYRAB/9-210
| 1.5e-19
|
|
|
| O58874_PYRHO/9-210
| 3.3e-18
|
|
|
| TENA_STACT/8-218
| 2.9e-14
|
|
|
| O60018_PICAN/332-587
| 5.2e-14
|
|
|
| THI21_SCHPO/298-502
| 9.1e-14
|
|
|
| PM36_SOYBN/19-228
| 2.1e-07
|
|
|
| PQQC_ACICA/14-225
| 0.023
|
|
|
| PQQC_PSEAE/12-223
| 0.045
|
|
|
| PQQCL_CHLTR/9-226
| 0.051
|
|
|
| PQQCL_CHLPN/5-222
| 0.079
|
|
|
| Q96XA8_SULTO/68-288
| 0.19
|
|
|
| PQQC_GLUOX/10-222
| 0.49
|
|
|
| PQQC_RHIME/11-223
| 0.56
|
|
|
| PQQC_XANAC/11-223
| 1.1
|
|
|
| Q9HJM8_THEAC/69-287
| 1.2
|
|
|
| P95864_SULSF/8-205
| 1.7
|
|
|
| PQQC_KLEPN/13-224
| 2
|
|
| SCALE
|
| | |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| 1 |
25 |
50 |
75 |
100 |
125 |
150 |
175 |
200 |
225 |
|
|---|
SECTION III: ANNOTATED SEQUENCES
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
- the motif number of the occurrence,
- the position p-value of the occurrence,
- the best possible match to the motif, and
- columns whose match to the motif has a positive score (indicated
by a plus sign).
TENA_BACSU/8-215
LENGTH = 208 COMBINED P-VALUE = 1.06e-69 E-VALUE = 2.6e-68
DIAGRAM: 10-[1]-48-[2]-3-[3]-23
[1]
7.6e-32
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++ ++++++ ++++++++++++++ ++++++++++++ + +++ ++
1 RSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAE
[2] [3]
1.0e-27 2.0e-2
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNPYW
+++++ +++ ++++++++++++++++ ++++++++++ +++ ++
76 MALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSVLSGNFAEILAALLPCYWLYYEVGEKLLHCDPGHPIYQ
2
KWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
+++ +++++++++ ++ +++ +++++++++++++
151 KWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGMAYRK
O25874_HELPY/8-216
LENGTH = 209 COMBINED P-VALUE = 1.52e-62 E-VALUE = 3.8e-61
DIAGRAM: 10-[1]-48-[2]-5-[3]-22
[1]
6.1e-32
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+++++++++ +++++++++++++++++++++ +++++++++++++
1 YQNVQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLFLLEYAKVFALGVVKACDEAVMREFSNAIQDILNNE
[2] [3]
8.9e-23 5.0e
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNP
+++++++ + +++ ++ ++++ +++ + +++++ + ++
76 MSIHNHYIRGLQITQKELQNARPTLANKSYTSYMLAEGFKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNALEHAF
-20
YWKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
+ +++ ++++++++++ + +++++ + ++++++++
151 YGHWIKGYSSKEFQACVNWNINLLDSLTLTSSKQEIEKLKDIFITTSEYEYLFWDMAYQ
THI22_SCHPO/330-539
LENGTH = 210 COMBINED P-VALUE = 2.46e-55 E-VALUE = 6.2e-54
DIAGRAM: 10-[1]-47-[2]-5-[3]-24
[1]
4.1e-31
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+++++++ +++++++++ +++ ++++++++++++++++++ +++
1 HPQVVPAWKEYINHKFTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYSLKGYKENTFPNILEAAQSVIHVIEEK
[2] [3]
7.7e-14 1.7e-
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNPY
+ ++++++++ + +++ ++++ +++ ++ ++ + + ++
76 ELHVSMCSSYGVSLQDLKSCEESPACTAYSRYILDTGAAQDVAALDFVQAPCLIGYYVIAARLMKEPFRNPQGPY
22
WKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
+++++++ ++++ ++++++++++++++ ++++++++
151 QKWVDNYFCEDYLSAVRRGCRQIEEIVLKLSPERIQELIEIFIRATKFETLFWETPYYEY
Y358_HAEIN/6-214
LENGTH = 209 COMBINED P-VALUE = 1.04e-53 E-VALUE = 2.6e-52
DIAGRAM: 10-[1]-47-[2]-5-[3]-23
[1]
2.5e-28
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++++ ++++++++++++++++++++++++++ ++++++++++ +++
1 IQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKAKNFAEMETPRKTLEILCQEI
[2] [3]
7.8e-19 1.3e-
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNPY
+++++++ +++++++++ +++ ++ ++++ +++++ + +++++
76 QLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMTGSLAELYAAVTPCALGYAQVARYITQHYPRLPNNPY
18
WKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
+ +++++++++++++ + ++ +++++ +++++
151 QTWIDTYASEEFQQAAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDL
THI20_YEAST/340-550
LENGTH = 211 COMBINED P-VALUE = 1.16e-43 E-VALUE = 2.9e-42
DIAGRAM: 10-[1]-49-[2]-5-[3]-23
[1]
1.5e-30
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++++ +++ +++++++++++++++ +++ +++++++++++++++++
1 HPKVKPHWDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVIVGGVRTEM
[2] [3]
2.6e-11 1.1
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDN
+ ++ ++ +++ ++++ + +++ ++++ +++ ++
76 GQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRRGNWQELVASLTPCLMGYGEALTKMKGKVTAPEGS
e-13
PYWKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
++ ++++++++ ++++++ ++ +++ + ++++++++
151 VYHEWCETYASSWYREAMDEGEKLLNHILETYPPEQLDTLVTIYAEVCELETNFWTAALEY
Q9UZQ1_PYRAB/7-210
LENGTH = 204 COMBINED P-VALUE = 1.33e-43 E-VALUE = 3.3e-42
DIAGRAM: 10-[1]-47-[2]-5-[3]-18
[1]
1.8e-27
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++++++++++ ++ ++++++++++ ++ +++ ++++ +++++
1 RRDADHIWRKIFEHPFVVQLYSGNLPMEKFKFYVLQDFNYLVGLTRALAVIASKADYPLLAELIELAREEITTEM
[2] [3]
1.4e-18 2.0e-
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNPY
++ +++++++++ +++ +++++++ ++++++++++ + +
76 KNYEELLKELGLTLEDAIKTEPTLVNSAYMDFMLSTAYKGRVVEGLTALLPCFWSYAEIAEYHKDKLDGNPVEIY
09
WKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
+++ + ++++ + + +++++++ ++ ++ ++
151 REWGRVYLSEEYLSLVSRLREIIDSLGGDYERLREIFITGSKFELAFWEMAWRG
Q9YEA4_AERPE/12-219
LENGTH = 208 COMBINED P-VALUE = 3.49e-37 E-VALUE = 8.7e-36
DIAGRAM: 9-[1]-48-[2]-5-[3]-22
[1]
3.4e-23
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++++++++ ++++++++++++ ++++ +++ + ++++++++
1 RDNMDLWSLLPSHPFVKALYSGSLPLDKFRFYAVQDYNYLVGLVRSLSIAASKSWSFEVARLALSHASFLASTEM
[2] [3]
1.5e-17 3.3e-
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNPY
+ +++++++ +++ +++++ ++++++ +++++ + +
76 ANYERLLGELGLSLSEVLREEPAPTNEAYVNFMIATCSTGTALECMVSLLPCYWSYREIAIANERLLRENSVDLY
08
WKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
+++ + + ++ ++++ ++ ++++ + ++ +
151 RRWASVYLSSEYGEAVEEYRRAVDRLWAEEGGVYSRLKRIFRKATRYEYMFWDMAWRM
THI22_YEAST/361-571
LENGTH = 211 COMBINED P-VALUE = 3.85e-34 E-VALUE = 9.6e-33
DIAGRAM: 10-[1]-49-[2]-5-[3]-23
[1]
1.5e-28
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++++ +++ +++++++++++++++ +++++++++ ++++ +++++
1 HPKVKPHWDAYVNHEFVKRVADGTLERKKFQFFIEQDYLYLIDYVRVCCVTGSKSPTLEDLEKDLVIADCARNEL
[2] [3]
1.6e-09 8.6
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDN
+ ++++++ +++ ++++++ +++ ++ + ++ ++
76 NEHERRLREEFGVKDPDYLQKIKRGPALRAYCRYLIDISRRGNWQEIVVALNPCLMGYVYAVDKVKDKITAAEGS
e-08
PYWKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
+ +++++ ++ +++ ++++ + + +++++ ++
151 IYSEWCDTCASSFCYQAVLEGERLMNHILETYPPDQLDSLVTIFARGCELETNFWTAAMEY
Q9UZQ2_PYRAB/9-210
LENGTH = 202 COMBINED P-VALUE = 6.18e-21 E-VALUE = 1.5e-19
DIAGRAM: 10-[1]-42-[2]-3-[3]-23
[1]
5.8e-14
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++ + ++++++ + +++++ +++ ++++ ++ + ++++++++
1 LREARPIWKKFLPHRFLKEVAEGKISKEAFARWLVNDYYFVKNALRFMAILMAKAPDNLLGFFAESIYYISQELT
[2] [3]
3.1e-08 5.4e-10
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNPYWKWIDTY
+ ++++++++ ++++++ + + +++ ++ + + ++ +++
76 MFKENAEKLGVELEGEIDWRAKAYVNYLLNTAYAGSFLEGFTAFYCEERAYYEAWKWVKENLKEKSPYIDFINHW
SGEEFQEAVRWGIALLDRHAQRCSPERRE
+++++++ +++++++++ +++ + +++
151 SSEDFRKYVERIEEILNSLAEMHGDFEKERAKKVFLEVSEFELLFWDIAYGG
O58874_PYRHO/9-210
LENGTH = 202 COMBINED P-VALUE = 1.32e-19 E-VALUE = 3.3e-18
DIAGRAM: 10-[1]-42-[2]-3-[3]-23
[1]
5.1e-12
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++ + ++ +++ + +++++ +++ ++++ ++ + ++++++++
1 LRNSSEIWRKFLPHRFLIEVAENSISREKFARWLVNDYYFVKNALRFMAILMAKAPDDLLSFFSESIYYISTELD
[2] [3]
3.2e-09 1.4e-09
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNPYWKWIDTY
+ +++++++++++++++ + + +++ ++ + ++++ +++
76 MFKRNAEKLGIRLNGNIDWRAKAYVNYLLNVAYSGSFLEGFTAYYCEEKAYYEAWKWVRDRVRSDNPYIDFINHW
SGEEFQEAVRWGIALLDRHAQRCSPERRE
+++++++ + +++++++ ++++ ++ +++
151 SSQEFEKYVNKIEAILNPLAEKHGEFEKEKAKIVFREVSNFELLFWDIAYGG
TENA_STACT/8-218
LENGTH = 211 COMBINED P-VALUE = 1.16e-15 E-VALUE = 2.9e-14
DIAGRAM: 10-[1]-50-[2]-68
[1]
1.3e-14
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+ +++++ ++ ++++ + +++ ++ ++++++ +++++ +
1 ERDAQPIIDEIYQDHFIQELLKGDIKKEALRQYLRADASYLREFANIYALLIPIMPDLESVRFLVDQIQFIVNGE
[2]
1.5e-07
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK
+ ++ + ++ + + ++++++ +++ ++++ +
76 VEAHEYMADYIGENYNEIVQKKVWPPSGDHYIKHMYYNVYAHENAAYAIAAMAPCPYVYAMIAKRAMKDPNLNKS
O60018_PICAN/332-587
LENGTH = 256 COMBINED P-VALUE = 2.06e-15 E-VALUE = 5.2e-14
DIAGRAM: 10-[1]-125-[3]-34
[1]
3.9e-15
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++++ ++++ + +++ +++ ++++++++++ ++ +++ + + +
1 HEKVVPHWQKYTHHQFVRQAMEDTLPVEKFNYFLKQDYLYLQAYHRVHVNLRSITESEELQGYVDEILGNIESEM
[3]
4.5e-07
PDNPYWKWIDTYSGEEFQEAVRWGIALLDRHAQRCSPERRE
+ ++++ + ++++ ++ ++++++++++ + + + +
151 ENNAKALMAARKLEQDAENGRLSYQADPGSPTQKMYRDWLSDYVAPWYLEACKRGEQVLNEYFEEYVRSKQHQDG
THI21_SCHPO/298-502
LENGTH = 205 COMBINED P-VALUE = 3.64e-15 E-VALUE = 9.1e-14
DIAGRAM: 10-[1]-46-[2]-1-[3]-24
[1]
3.6e-14
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+++++++ ++ ++++++ ++ +++ ++ +++ +++ +++ +
1 HPSITPKWLSIVNHPFVEQLKAGTLSRLPFQKYLVLKYHMLINNAQAAGMMAFSSSSISAIEHSAKIIQAIKEEN
[2] [3]
2.8e-07 9.6e-05
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK PDNPYWKWID
++ ++++++ + +++ ++++ +++ + + ++ ++ ++++
76 VTHLRICEQYGLSASQITKSKPEIVKSHSLFIHDTAQQDGLRGIQIAMLPFVFMIQEVVSQISASDGYPYVAWVE
TYSGEEFQEAVRWGIALLDRHAQRCSPERRE
++ + +++++ +++ + ++ + +
151 HCKDKSATSHIETLLESLETNSQIISLSKVQHLLGILEKSLDFERLVLDTSSSNE
PM36_SOYBN/19-228
LENGTH = 210 COMBINED P-VALUE = 8.49e-09 E-VALUE = 2.1e-07
DIAGRAM: 10-[1]-154
[1]
1.2e-11
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
++++ + +++ + ++++ ++++++++ +++ + + ++
1 LKKHRLLYNGATRHPLIISIRDGTINTASFKTWLAQDYLFVRAFVPFVASVLIKAWKESDCSGDMEVILGGMASL
PQQC_ACICA/14-225
LENGTH = 212 COMBINED P-VALUE = 9.35e-04 E-VALUE = 0.023
DIAGRAM: 11-[1]-155
[1]
1.6e-06
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+++++ +++ + + + +++ +++ ++ + +++ +
1 KQAIIDKGQYYHIYHPFHVMMYEGKATQQQIQAWVANRYYYQINIPLKDAAIMANCPDQRVRQEWIQRMIDQDGE
PQQC_PSEAE/12-223
LENGTH = 212 COMBINED P-VALUE = 1.81e-03 E-VALUE = 0.045
DIAGRAM: 11-[1]-155
[1]
3.5e-06
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+++++ +++ + +++ + +++ ++ ++ + ++ +
1 ERALRDKGRYYHIHHPFHVAMYEGRASREQIQGWVANRFYYQVNIPLKDAAILANCPDREVRREWIQRILDHDGA
PQQCL_CHLTR/9-226
LENGTH = 218 COMBINED P-VALUE = 2.06e-03 E-VALUE = 0.051
DIAGRAM: 12-[1]-160
[1]
1.5e-05
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+++ + + ++ + ++ + + + ++ +++ + ++ ++ +
1 LDQLDLIIQNKHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEEN
PQQCL_CHLPN/5-222
LENGTH = 218 COMBINED P-VALUE = 3.17e-03 E-VALUE = 0.079
DIAGRAM: 12-[1]-160
[1]
6.0e-06
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+++ + + + +++ + + + ++ +++ ++ + ++ +
1 IELLDKQIEDQHMLKHEFYQRWSEGKLEKQQLQAYAKDYYLHIKAFPCYLSALHARCDDLQIRRQILENLMDEEA
Q96XA8_SULTO/68-288
LENGTH = 221 COMBINED P-VALUE = 7.69e-03 E-VALUE = 0.19
DIAGRAM: 10-[1]-165
[1]
2.5e-06
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+ + + ++ + + +++ +++++ ++++ + +++
1 WIRKRFIEKFYGENPHPFILAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVFKTDKDEVVEYELENIAVEFIGY
PQQC_GLUOX/10-222
LENGTH = 213 COMBINED P-VALUE = 1.95e-02 E-VALUE = 0.49
DIAGRAM: 213
PQQC_RHIME/11-223
LENGTH = 213 COMBINED P-VALUE = 2.24e-02 E-VALUE = 0.56
DIAGRAM: 213
PQQC_XANAC/11-223
LENGTH = 213 COMBINED P-VALUE = 4.42e-02 E-VALUE = 1.1
DIAGRAM: 112-[2]-64
[2]
9.5e-05
YTRYMLDTGWSGDFPEGMMAVLPCFWIYGEVGKHLHK
+ + +++++ + + + + ++++ +
76 NSASDGGIARWLHLTDALGLDRTLVESGRALLPGTRFAVQAYLHFVREKSLLEAIASSLTELFAPNIIGQRVAGM
Q9HJM8_THEAC/69-287
LENGTH = 219 COMBINED P-VALUE = 4.93e-02 E-VALUE = 1.2
DIAGRAM: 9-[1]-164
[1]
4.5e-05
IIHHPFVQELGDGTLPRDKFRHYMIQDYHYLVHFARALALAAAKAP
+ ++ + + + +++ ++++ + ++++ ++
1 WARMEFIAKFYAHPHPFMEAMQKPTVPVLLGYVIEHRFFLKNWIRTLSMVIHSTTSDDAFEYEVENVATEYIGLN
P95864_SULSF/8-205
LENGTH = 198 COMBINED P-VALUE = 6.81e-02 E-VALUE = 1.7
DIAGRAM: 198
PQQC_KLEPN/13-224
LENGTH = 212 COMBINED P-VALUE = 7.86e-02 E-VALUE = 2
DIAGRAM: 212
Debugging Information
CPU: kodomo.fbb.msu.ru
Time 0.016001 secs.
mast ./meme.txt -d ./seed.fasta -ev 10.000000 -mt 0.000100
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Links to Entrez database at NCBI
Links to sequence scores (section I)
Links to motif diagrams (section II)
Links to sequence/motif annotated alignments (section III)
This information