FastQCFastQC Report
Пн 15 дек 2014
Ath_tae_008_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameAth_tae_008_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3752156
Sequences flagged as poor quality0
Sequence length50-101
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCCGTG6550.00128119523.7860493
TATACTG13550.001832796617.247084
TATGGGC9350.001277486716.6629523
GGGTAGC4753.3208016E-616.3998554
TGGCGAC4904.853051E-615.9018215
GGTAGCC5158.720597E-615.1298895
GTAGCCG5152.5579086E-415.126084
TTCTGCG5752.589395E-614.992219
TTTGGCG12800.014.8165229
CCCGGGG2803.096582E-614.7372188
GCGACAC3651.3761019E-714.17486612-13
TAAACGG11152.782674E-413.972973
TGTAGCG5603.3488803E-513.8544089
CAAAGCG9401.1204975E-913.756159
ATACGCA8200.013.66820310-11
GCGGAGA5850.003398429113.3194745
CTCTTCG13850.013.0708279
ACTAGCC6050.004744425412.8791616
CAAGGCC6055.838174E-612.8759183
ACCTTCG8601.0105487E-612.0286349
Produced by FastQC (version 0.11.2)