BLASTN 2.14.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: D:\Users\User\Desktop\sunetr.fna
           147 sequences; 2,471,666,657 total letters



Query= CP014225.1:complement(926804-928359)|16S_rRNA|Escherichia coli str.
K-12 substr. MG1655 strain K-12

Length=1556
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

NW_026060409.1 Suncus etruscus isolate mSunEtr1 unplaced genomic ...  56.3    8e-05
NC_064868.1 Suncus etruscus isolate mSunEtr1 chromosome X, mSunEt...  56.3    8e-05
NC_064862.1 Suncus etruscus isolate mSunEtr1 chromosome 15, mSunE...  56.3    8e-05
NC_064849.1 Suncus etruscus isolate mSunEtr1 chromosome 2, mSunEt...  51.8    0.001


>NW_026060409.1 Suncus etruscus isolate mSunEtr1 unplaced genomic 
scaffold, mSunEtr1.pri.cur scaffold_97_ctg1, whole genome 
shotgun sequence
Length=56304

 Score = 56.3 bits (61),  Expect = 8e-05
 Identities = 38/43 (88%), Gaps = 0/43 (0%)
 Strand=Plus/Plus

Query  1494  AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA  1536
             |||||||||||||||  ||||||| ||||||||||  ||||||
Sbjct  5395  AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA  5437


>NC_064868.1 Suncus etruscus isolate mSunEtr1 chromosome X, mSunEtr1.pri.cur, 
whole genome shotgun sequence
Length=131976403

 Score = 56.3 bits (61),  Expect = 8e-05
 Identities = 38/43 (88%), Gaps = 0/43 (0%)
 Strand=Plus/Minus

Query  1494       AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA  1536
                  |||||||||||||||  ||||||| ||||||||||  ||||||
Sbjct  129601102  AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA  129601060


>NC_064862.1 Suncus etruscus isolate mSunEtr1 chromosome 15, mSunEtr1.pri.cur, 
whole genome shotgun sequence
Length=93472198

 Score = 56.3 bits (61),  Expect = 8e-05
 Identities = 38/43 (88%), Gaps = 0/43 (0%)
 Strand=Plus/Plus

Query  1494      AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA  1536
                 |||||||||||||||  ||||||| ||||||||||  ||||||
Sbjct  93466211  AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA  93466253


>NC_064849.1 Suncus etruscus isolate mSunEtr1 chromosome 2, mSunEtr1.pri.cur, 
whole genome shotgun sequence
Length=171222326

 Score = 51.8 bits (56),  Expect = 0.001
 Identities = 37/43 (86%), Gaps = 0/43 (0%)
 Strand=Plus/Minus

Query  1494      AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA  1536
                 |||||||||||||||  ||||||| ||||||||||  || |||
Sbjct  36992777  AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGTTCA  36992735



Lambda      K        H
   0.634    0.408    0.912 

Gapped
Lambda      K        H
   0.625    0.410    0.780 

Effective search space used: 3764340930538


  Database: D:\Users\User\Desktop\sunetr.fna
    Posted date:  Oct 31, 2023  2:58 PM
  Number of letters in database: 2,471,666,657
  Number of sequences in database:  147



Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2