RID: 8X3B6MUG013 Job Title:AAC07049:RNase III [Aquifex aeolicus VF5] Program: BLASTP Query: RNase III [Aquifex aeolicus VF5] ID: AAC07049.1(amino acid) Length: 221 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Aquifex aeol... NA 224324 439 439 100% 4e-158 100.00 221 O67082.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Hydrogenobac... NA 380749 245 245 100% 2e-81 54.39 232 B4U7T8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Sulfurovum s... NA 387093 143 143 95% 1e-41 39.45 223 A6QCJ0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 399739 143 143 92% 2e-41 39.62 229 A4XSC4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Wolinella su... NA 273121 141 141 95% 2e-40 39.45 238 Q7M840.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Caldanaeroba... NA 273068 139 139 95% 1e-39 40.09 228 Q8R9W3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 557722 139 139 92% 1e-39 38.21 229 B7UYX2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 205918 139 139 92% 1e-39 38.68 229 Q4ZPE1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Nitratirupto... NA 387092 138 138 86% 2e-39 41.92 226 A6Q1H0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 381754 138 138 92% 2e-39 38.21 229 A6VAK6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 264730 137 137 92% 3e-39 38.68 229 Q48EV3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Haemophilus ... NA 374930 137 137 98% 3e-39 36.24 227 A5UBC4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Borrelia gar... NA 290434 138 138 97% 3e-39 38.60 245 Q660G7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 223283 137 137 92% 6e-39 38.21 229 Q87XG1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella a... NA 326297 136 136 99% 8e-39 37.00 226 A1S3Y1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Haemophilus ... NA 374931 136 136 98% 1e-38 36.24 227 A5UFI8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Borreliella ... NA 224326 136 136 97% 2e-38 39.13 245 O51648.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Borreliella ... NA 390236 136 136 97% 2e-38 38.60 245 Q0SMF0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Actinobacill... NA 434271 135 135 95% 2e-38 37.90 223 B0BUA6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella o... NA 211586 135 135 98% 2e-38 36.89 226 Q8EH81.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Histophilus ... NA 228400 135 135 96% 3e-38 37.39 223 B0USS1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella b... NA 402882 135 135 98% 3e-38 37.33 226 A6WKQ7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Helicobacter... NA 235279 135 135 92% 5e-38 39.91 240 Q7VIA9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Haemophilus ... NA 71421 134 134 98% 6e-38 35.81 227 P44441.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Dechloromona... NA 159087 134 134 95% 8e-38 37.44 222 Q47EF7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Natranaerobi... NA 457570 134 134 92% 9e-38 40.09 230 B2A2N1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Glaesserella... NA 557723 133 133 96% 1e-37 36.94 223 B8F3C7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bdellovibrio... NA 264462 133 133 95% 2e-37 36.61 234 Q6MLR5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella b... NA 325240 132 132 98% 3e-37 36.89 226 A3D1V6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... [Haemophilus... NA 233412 132 132 95% 3e-37 36.07 222 Q7VL75.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Azotobacter ... NA 322710 132 132 92% 4e-37 37.26 229 C1DQS2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pasteurella ... NA 272843 132 132 97% 4e-37 37.22 225 P57805.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella s... NA 94122 132 132 98% 4e-37 36.44 226 A0KZN2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia f... NA 315456 132 132 96% 4e-37 38.50 225 Q4UKA8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella s... NA 351745 132 132 98% 5e-37 36.00 226 A1RMC7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella s... NA 60481 132 132 98% 5e-37 36.44 226 Q0HSJ1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Actinobacill... NA 416269 131 131 95% 6e-37 37.44 223 A3MZQ9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Campylobacte... NA 360106 131 131 95% 6e-37 38.36 223 A0RRM7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella s... NA 60480 131 131 98% 6e-37 36.44 226 Q0HG98.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Magnetococcu... NA 156889 132 132 98% 7e-37 36.17 246 A0L633.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 220664 131 131 92% 1e-36 36.32 229 Q4KHT1.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella f... NA 318167 130 130 98% 1e-36 37.33 226 Q07YZ6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 216595 130 130 92% 2e-36 37.26 229 C3K6Y7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Alkalilimnic... NA 187272 130 130 97% 2e-36 34.53 228 Q0A8Z1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella d... NA 318161 130 130 98% 2e-36 37.17 226 Q12KI1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia a... NA 293614 130 130 99% 3e-36 37.23 227 A8GM79.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Methylococcu... NA 243233 130 130 97% 3e-36 39.01 230 Q608M7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Thermotoga n... NA 309803 130 130 94% 4e-36 36.89 240 B9K9K8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 205922 129 129 92% 5e-36 36.79 229 Q3KHL9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 76869 129 129 96% 6e-36 37.39 229 B0KV27.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Acinetobacte... NA 871585 128 128 96% 1e-35 36.65 230 F0KKL2.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bordetella p... NA 257313 129 129 93% 1e-35 34.88 256 Q7VW39.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Vibrio campb... NA 1224742 128 128 96% 1e-35 35.59 225 A7MZA8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Geobacter me... NA 269799 129 129 94% 1e-35 34.07 246 Q39T82.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Acinetobacte... NA 62977 128 128 96% 1e-35 36.20 230 Q6F9C2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... [Mannheimia]... NA 221988 128 128 98% 1e-35 35.96 224 Q65VN5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Oleidesulfov... NA 207559 128 128 97% 1e-35 36.40 229 Q310Z1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Vibrio parah... NA 223926 127 127 96% 2e-35 35.59 225 Q87LN9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 351746 127 127 96% 2e-35 37.39 229 A5W8F2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bordetella p... NA 340100 128 128 93% 2e-35 34.42 252 A9IIJ2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Desulfovibri... NA 883 127 127 97% 3e-35 34.78 230 B8DPB3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudothermo... NA 416591 127 127 97% 4e-35 36.64 238 A8F397.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Salmonella e... NA 321314 127 127 97% 4e-35 35.27 226 Q57LD0.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Helicobacter... NA 382638 127 127 95% 5e-35 38.46 234 Q17XJ6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Phenylobacte... NA 450851 127 127 95% 5e-35 35.14 238 B4RCU4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Nitrosococcu... NA 323261 126 126 92% 6e-35 38.03 233 Q3J8D5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 390235 126 126 92% 7e-35 37.26 229 B1J4E0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia b... NA 391896 126 126 96% 8e-35 39.38 227 A8GYE2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia r... NA 392021 126 126 98% 9e-35 37.55 227 A8GQT8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Thermotoga s... NA 126740 126 126 94% 1e-34 37.17 240 B1LCY9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia p... NA 562019 125 125 98% 1e-34 37.55 227 C4K1R3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudomonas ... NA 384676 125 125 92% 1e-34 36.79 229 Q1I5V8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Candidatus S... NA 234267 127 127 93% 1e-34 36.32 271 Q027L3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Vibrio atlan... NA 575788 125 125 96% 1e-34 34.23 225 B7VK79.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Helicobacter... NA 85963 125 125 96% 2e-34 38.84 239 Q9ZLH2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Syntrophobac... NA 335543 125 125 96% 2e-34 36.91 242 A0LGM1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bordetella a... NA 360910 126 126 92% 2e-34 35.38 251 Q2KWY0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia m... NA 416276 125 125 98% 2e-34 37.55 227 A8F0M2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Acinetobacte... NA 400667 125 125 96% 2e-34 35.75 230 A3M7P2.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Helicobacter... NA 85962 125 125 96% 2e-34 38.84 239 P56118.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia t... NA 257363 125 125 98% 2e-34 37.55 227 Q68XY5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Campylobacte... NA 360104 125 125 95% 2e-34 37.33 223 A8Z6F6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Helicobacter... NA 570508 125 125 96% 3e-34 38.84 239 B6JLQ0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Acinetobacte... NA 509170 125 125 96% 3e-34 35.75 230 B0VTM5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia c... NA 272944 124 124 98% 3e-34 37.12 227 Q92JB0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Dehalococcoi... NA 243164 125 125 99% 3e-34 35.90 237 Q3Z7Q8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Psychrobacte... NA 259536 125 125 98% 3e-34 34.51 265 Q4FUV6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella s... NA 425104 124 124 98% 3e-34 36.00 225 A8FSD6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ralstonia pi... NA 402626 125 125 93% 5e-34 36.74 256 B2U981.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Thermotoga m... NA 243274 124 124 94% 7e-34 36.00 240 Q9X0I6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Helicobacter... NA 563041 124 124 96% 8e-34 38.84 239 B5Z735.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pelotomaculu... NA 370438 124 124 92% 9e-34 36.49 241 A5D1H6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Carboxydothe... NA 246194 123 123 95% 1e-33 38.84 235 Q3AC58.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Vibrio chole... NA 345073 123 123 96% 1e-33 35.14 225 A5F5H8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Fusobacteriu... NA 190304 123 123 96% 1e-33 34.51 234 Q8RGX3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Desulfotalea... NA 177439 123 123 96% 1e-33 36.96 241 Q6ANV0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Vibrio chole... NA 579112 123 123 96% 1e-33 35.14 225 C3LR04.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia p... NA 272947 123 123 98% 1e-33 37.12 225 Q9ZE31.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ralstonia so... NA 267608 123 123 93% 2e-33 36.74 256 Q8Y0I1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Idiomarina l... NA 283942 122 122 98% 2e-33 35.56 229 Q5R106.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Hahella chej... NA 349521 122 122 95% 2e-33 36.07 226 Q2SL32.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Aliarcobacte... NA 367737 122 122 91% 3e-33 38.86 224 A8EV88.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Xylella fast... NA 405440 121 121 96% 5e-33 36.20 227 B0U3D8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Campylobacte... NA 360105 121 121 95% 5e-33 37.33 223 A7H186.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Roseiflexus ... NA 383372 121 121 97% 5e-33 35.50 234 A7NGC5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Clostridium ... NA 935198 121 121 96% 6e-33 36.44 232 B2TJ22.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Xylella fast... NA 160492 121 121 96% 6e-33 36.20 227 Q9PB98.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Francisella ... NA 401614 121 121 94% 7e-33 37.96 230 A0Q7W6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Helicobacter... NA 512562 121 121 96% 7e-33 38.57 238 B2UTG4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Oceanobacill... NA 221109 121 121 96% 7e-33 35.53 228 Q8ER05.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rickettsia c... NA 293613 120 120 98% 9e-33 36.68 227 A8EXI3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pseudoaltero... NA 326442 120 120 97% 1e-32 34.53 225 Q3IDL2.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Clostridium ... NA 508767 120 120 96% 1e-32 36.44 232 B2V4D6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Actinobacill... NA 339671 120 120 98% 2e-32 35.40 224 A6VLV8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Thiobacillus... NA 292415 120 120 88% 2e-32 37.25 226 Q3SH50.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella p... NA 398579 120 120 98% 2e-32 33.78 225 A8H1C7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella p... NA 225849 120 120 98% 2e-32 33.78 225 B8CQJ5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Aliivibrio f... NA 312309 120 120 94% 2e-32 34.26 223 Q5E314.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Francisella ... NA 418136 120 120 94% 2e-32 37.50 230 A4IWK9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Francisella ... NA 458234 120 120 94% 2e-32 37.50 230 A7NAR0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ehrlichia ca... NA 269484 119 119 98% 3e-32 34.65 226 Q3YQX7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Xanthomonas ... NA 314565 119 119 97% 3e-32 34.98 226 Q4USF7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Xylella fast... NA 405441 119 119 96% 3e-32 36.20 227 B2I604.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Dehalococcoi... NA 255470 120 120 99% 3e-32 34.62 237 Q3ZXY9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella l... NA 323850 119 119 96% 3e-32 33.78 225 A3QBS7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Syntrophotal... NA 338963 119 119 96% 4e-32 32.74 232 Q3A4Q8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Francisella ... NA 441952 119 119 94% 4e-32 37.50 230 B2SFY4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Cupriavidus ... NA 977880 120 120 90% 4e-32 35.58 256 B3R1Z9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Francisella ... NA 393011 119 119 94% 4e-32 37.50 230 Q0BN07.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Clostridium ... NA 272562 119 119 95% 5e-32 35.29 230 Q97IA4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Cupriavidus ... NA 381666 120 120 90% 5e-32 35.58 256 Q0K8N3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Desulfovibri... NA 882 119 119 98% 5e-32 32.17 253 Q72C44.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Clostridium ... NA 290402 119 119 97% 6e-32 36.24 232 A6LSM2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Delftia acid... NA 398578 118 118 97% 8e-32 34.82 227 A9BNJ5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Cupriavidus ... NA 266264 119 119 90% 8e-32 35.58 256 Q1LKN1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Symbiobacter... NA 292459 119 119 92% 8e-32 36.99 235 Q67PF5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Campylobacte... NA 195099 118 118 95% 9e-32 37.61 224 Q5HSF8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Francisella ... NA 393115 118 118 94% 9e-32 37.50 230 Q14G66.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Buchnera aph... NA 561501 118 118 95% 1e-31 37.10 226 B8D7F5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Xanthomonas ... NA 316273 117 117 97% 1e-31 34.98 226 Q3BVV6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Clostridium ... NA 212717 118 118 97% 1e-31 37.61 235 Q895M9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Cupriavidus ... NA 264198 118 118 90% 2e-31 35.10 256 Q46Z18.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Campylobacte... NA 192222 117 117 95% 2e-31 37.61 224 Q9PM40.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 488223 117 117 96% 2e-31 36.36 232 C1CKY7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ehrlichia ch... NA 205920 117 117 96% 2e-31 36.16 226 Q2GFE4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Campylobacte... NA 407148 117 117 95% 3e-31 37.61 224 A8FNU7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Myxococcus x... NA 246197 117 117 96% 3e-31 33.63 260 Q1D5X9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Campylobacte... NA 360109 116 116 95% 4e-31 37.61 225 A7H5Y2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Thermotoga p... NA 390874 117 117 94% 4e-31 34.20 240 A5IN74.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella h... NA 458817 116 116 98% 4e-31 32.89 225 B0TIV7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 553482 116 116 99% 5e-31 34.47 230 C0M8Y3.1 RecName: Full=Ribonuclease 3; AltName: Full=Antibiotic... Streptomyces... NA 100226 117 117 92% 5e-31 38.71 276 Q9ZBQ7.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 553483 116 116 99% 5e-31 34.47 230 C0MCR4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Clostridium ... NA 431943 117 117 98% 5e-31 34.65 244 A5N807.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Xanthomonas ... NA 291331 116 116 96% 6e-31 34.84 226 Q5H1R2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Geobacter su... NA 243231 116 116 96% 8e-31 35.53 248 Q74AX1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Buchnera aph... NA 198804 115 115 95% 9e-31 35.00 226 Q8K9R1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 198466 115 115 99% 9e-31 34.47 230 P0DF14.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 218495 115 115 99% 1e-30 35.59 230 B9DRH1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Xanthomonas ... NA 190486 115 115 97% 1e-30 34.53 226 Q8PMV0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Sodalis glos... NA 343509 115 115 97% 1e-30 36.16 226 Q2NS13.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 487213 115 115 96% 1e-30 36.24 232 C1CR56.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 487214 115 115 96% 1e-30 36.24 232 B1IC43.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Desulforamul... NA 349161 115 115 96% 1e-30 33.04 246 A4J683.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 160491 115 115 99% 1e-30 34.47 230 A2RFW8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 299768 115 115 98% 1e-30 35.47 237 Q5LZ68.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 370552 115 115 99% 1e-30 34.47 230 Q1JI19.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 322159 115 115 98% 1e-30 35.47 229 Q03K17.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Aromatoleum ... NA 76114 115 115 90% 1e-30 32.21 225 Q5P086.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Alcanivorax ... NA 393595 115 115 97% 2e-30 34.82 228 Q0VP19.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 319701 115 115 99% 2e-30 34.04 230 Q48UR6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Proteus mira... NA 529507 115 115 90% 2e-30 35.89 226 B4F047.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Roseiflexus ... NA 357808 115 115 91% 2e-30 33.33 237 A5V230.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Candidatus B... NA 291272 114 114 99% 2e-30 32.47 229 Q492D1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 516950 114 114 90% 3e-30 36.92 232 B2IPN5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 467705 114 114 95% 3e-30 35.24 232 A8AWC2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 170187 114 114 90% 3e-30 36.92 232 Q97QG6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 512566 114 114 90% 3e-30 36.92 232 B5E4Y2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Vibrio vulni... NA 196600 114 114 90% 3e-30 35.10 225 Q7MHN8.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Vibrio vulni... NA 216895 114 114 90% 3e-30 35.10 225 Q8DC76.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 388919 114 114 94% 3e-30 34.98 232 A3CP46.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptomyces... NA 227882 115 115 92% 4e-30 38.25 276 Q82JT9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Francisella ... NA 484022 114 114 96% 4e-30 36.20 230 B0TXH8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rhodopseudom... NA 258594 114 114 94% 6e-30 33.48 272 Q6N6C1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rhodopirellu... NA 243090 114 114 98% 6e-30 32.00 266 Q7UGZ7.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Clostridium ... NA 195102 114 114 97% 7e-30 34.80 237 Q8XJN8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Enterobacter... NA 399742 113 113 97% 8e-30 34.82 226 A4WDD8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Candidatus P... NA 335992 112 112 88% 1e-29 37.13 222 Q4FLS9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Psychromonas... NA 357804 112 112 96% 1e-29 33.03 228 A1SSM8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Listeria mon... NA 552536 112 112 98% 1e-29 31.76 229 B8DDU8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 205921 112 112 96% 1e-29 33.19 228 Q3K1Y2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Marinomonas ... NA 400668 112 112 92% 1e-29 34.27 227 A6VUP6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Erwinia tasm... NA 465817 112 112 90% 2e-29 33.01 226 B2VI46.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Coxiella bur... NA 360115 112 112 99% 2e-29 32.61 233 A9N942.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Jannaschia s... NA 290400 112 112 94% 3e-29 31.80 227 Q28V23.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Salmonella e... NA 554290 112 112 97% 3e-29 35.27 226 B5BAT0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Listeria wel... NA 386043 111 111 98% 3e-29 31.33 229 A0AJR0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Escherichia ... NA 405955 111 111 97% 5e-29 35.27 226 A1AE97.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Wolbachia en... NA 292805 111 111 98% 5e-29 34.35 243 Q5GTI3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Listeria mon... NA 568819 111 111 98% 5e-29 31.33 229 C1KWA4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Thermobifida... NA 269800 111 111 89% 6e-29 35.71 240 Q47S78.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Klebsiella p... NA 272620 111 111 97% 6e-29 35.27 226 A6TCI1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ehrlichia ru... NA 254945 110 110 95% 6e-29 34.53 227 Q5HA74.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Anaplasma ma... NA 234826 111 111 94% 7e-29 36.07 232 Q5P9U8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Geobacillus ... NA 420246 111 111 98% 7e-29 30.90 246 A4IM67.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Aster yellow... NA 322098 111 111 96% 7e-29 35.40 237 Q2NJY3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Anaplasma ma... NA 320483 110 110 94% 8e-29 36.07 232 B9KGT5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Geobacillus ... NA 235909 111 111 98% 8e-29 31.03 246 Q5L0Q3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Buchnera aph... NA 224915 110 110 96% 8e-29 34.53 226 P59476.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Listeria mon... NA 169963 110 110 98% 9e-29 31.33 229 Q8Y691.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Treponema pa... NA 455434 111 111 93% 9e-29 32.58 254 B2S448.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ehrlichia ru... NA 302409 110 110 95% 9e-29 34.08 227 Q5FGH0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Candidatus B... NA 203907 110 110 96% 9e-29 33.48 232 Q7VRR0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Syntrophomon... NA 335541 110 110 94% 1e-28 33.33 233 Q0AYW0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Coxiella bur... NA 434922 110 110 99% 1e-28 32.61 233 A9KFA0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Candidatus P... NA 264201 110 110 89% 1e-28 35.07 242 Q6MEK1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pectobacteri... NA 561230 110 110 97% 2e-28 34.82 226 C6DC00.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Edwardsiella... NA 634503 109 109 97% 2e-28 34.38 226 C5B8Y2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Wolbachia en... NA 570417 110 110 95% 2e-28 35.24 230 B3CMS0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Colwellia ps... NA 167879 110 110 97% 2e-28 35.27 266 Q47WP5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Legionella p... NA 297245 109 109 97% 2e-28 32.29 224 Q5WVI4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Salmonella e... NA 90370 109 109 97% 2e-28 34.82 226 Q8Z4K4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Staphylococc... NA 176280 110 110 94% 2e-28 32.89 245 Q8CPI1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bartonella t... NA 382640 109 109 96% 2e-28 33.33 235 A9IRN0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Agrobacteriu... NA 176299 109 109 95% 3e-28 35.00 239 Q8UGK2.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Staphylococc... NA 176279 109 109 94% 3e-28 32.89 245 Q5HPV8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Enterococcus... NA 226185 109 109 96% 3e-28 33.91 230 Q82ZG1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Coxiella bur... NA 434923 109 109 99% 3e-28 32.17 233 B6IYZ9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Coxiella bur... NA 434924 109 109 99% 4e-28 32.61 233 B6J4J9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Legionella p... NA 272624 108 108 97% 4e-28 31.84 224 Q5ZUD5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Listeria inn... NA 272626 108 108 98% 5e-28 30.60 229 Q92AK3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Leptospira i... NA 267671 108 108 96% 6e-28 34.22 247 Q75FW5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Legionella p... NA 400673 108 108 97% 6e-28 31.84 224 A5ID21.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Wigglesworth... NA 36870 108 108 96% 7e-28 31.53 226 Q8D305.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pectobacteri... NA 218491 108 108 97% 7e-28 34.82 226 Q6D219.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Staphylococc... NA 273036 108 108 94% 9e-28 32.14 243 Q2YXI3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Staphylococc... NA 279808 108 108 91% 9e-28 31.19 245 Q4L5T5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Candidatus H... NA 572265 107 107 97% 1e-27 32.29 226 C4K3Z3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bartonella b... NA 360095 108 108 96% 1e-27 32.29 235 A1US36.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Nitrosomonas... NA 228410 108 108 94% 1e-27 34.26 245 Q820I0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pantoea anan... NA 706191 107 107 90% 1e-27 32.54 226 D4GKM1.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Photorhabdus... NA 243265 107 107 97% 2e-27 35.71 226 Q7N1X5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Variovorax p... NA 543728 107 107 92% 2e-27 34.91 228 C5CSF5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bartonella h... NA 283166 107 107 97% 2e-27 34.38 235 Q6G459.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Nitrosomonas... NA 335283 107 107 94% 3e-27 35.19 245 Q0AF70.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Anoxybacillu... NA 491915 107 107 93% 3e-27 31.67 238 B7GGE9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Staphylococc... NA 359786 107 107 94% 4e-27 31.70 243 A5ISB8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Shewanella w... NA 392500 106 106 91% 5e-27 32.86 225 B1KI57.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Lactiplantib... NA 220668 106 106 96% 5e-27 31.00 231 Q88WK0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Staphylococc... NA 342451 106 106 94% 7e-27 30.80 244 Q49X17.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Sinorhizobiu... NA 394 105 105 96% 8e-27 34.23 239 C3M8S4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Lactococcus ... NA 272622 105 105 97% 8e-27 32.90 231 Q030F9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Sinorhizobiu... NA 266834 105 105 96% 9e-27 35.59 238 Q92R47.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Leptospira b... NA 355277 105 105 96% 1e-26 33.33 247 Q04R64.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Sinorhizobiu... NA 366394 105 105 96% 1e-26 35.59 238 A6U7A8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Caulobacter ... NA 565050 104 104 91% 2e-26 33.64 231 B8H627.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Staphylococc... NA 418127 105 105 94% 2e-26 31.25 243 A7X1J9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Lactococcus ... NA 272623 104 104 97% 2e-26 32.47 231 Q9CHD0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Leptospira b... NA 355276 105 105 96% 2e-26 33.33 247 Q053L4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Treponema de... NA 243275 105 105 93% 2e-26 34.55 246 Q73NX5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Geobacillus ... NA 471223 105 105 93% 2e-26 32.58 246 C5D8T6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Roseobacter ... NA 375451 104 104 86% 2e-26 31.50 228 Q16AI6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chloroflexus... NA 326427 104 104 89% 3e-26 31.13 229 B8GAM6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Photobacteri... NA 298386 103 103 96% 3e-26 33.48 224 Q6LMS2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Brucella can... NA 483179 104 104 94% 4e-26 32.72 245 A9MA35.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bradyrhizobi... NA 224911 104 104 94% 4e-26 32.27 250 O69161.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pediococcus ... NA 278197 103 103 97% 4e-26 31.91 232 Q03FX0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Wolbachia sp... NA 66084 103 103 96% 4e-26 33.33 232 C0R4Q8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Lactococcus ... NA 416870 103 103 97% 4e-26 32.47 231 A2RLZ8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Buchnera aph... NA 372461 102 102 97% 8e-26 31.70 226 Q057R4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus cyt... NA 315749 103 103 89% 1e-25 33.02 245 A7GRH9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Halalkalibac... NA 272558 103 103 99% 1e-25 32.07 263 Q9KA05.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus vel... NA 326423 102 102 96% 2e-25 31.00 249 A7Z4L3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Heliomicrobi... NA 498761 102 102 95% 2e-25 30.04 235 B0TGW4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus lic... NA 279010 102 102 96% 3e-25 31.58 249 Q65JQ5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Serratia pro... NA 399741 101 101 90% 3e-25 33.01 226 A8GI25.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ruegeria pom... NA 246200 101 101 97% 3e-25 30.36 225 Q5LNK5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus cer... NA 405534 101 101 96% 4e-25 34.65 245 B7HLI2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chromobacter... NA 243365 101 101 96% 4e-25 34.68 236 Q7NWC4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus cer... NA 405535 101 101 96% 5e-25 34.65 245 B7JJT6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus cer... NA 288681 101 101 96% 5e-25 34.65 245 Q636H7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus cer... NA 405532 101 101 96% 6e-25 34.65 245 B7HDX2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Nitrobacter ... NA 323098 101 101 85% 8e-25 30.69 266 Q3SRB3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rhodoferax f... NA 338969 100 100 96% 8e-25 35.11 228 Q21XN1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Staphylococc... NA 396513 100 100 86% 9e-25 31.40 242 B9DPJ2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bartonella q... NA 283165 100 100 96% 9e-25 32.59 235 Q6G082.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Cereibacter ... NA 349102 100 100 94% 1e-24 31.05 229 A4WVP5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ligilactobac... NA 362948 100 100 96% 1e-24 28.70 232 Q1WUA0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Onion yellow... NA 262768 100 100 90% 1e-24 33.80 238 Q6YPW7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rhizobium le... NA 395492 100 100 94% 1e-24 33.03 239 B5ZW73.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Agrobacteriu... NA 311402 100 100 95% 1e-24 33.79 239 B9JUN7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Methylocella... NA 395965 99.8 99.8 92% 2e-24 31.13 235 B8EK13.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Yersinia pes... NA 386656 99.4 99.4 97% 2e-24 34.82 226 A4TKX8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rhizobium et... NA 491916 99.4 99.4 94% 2e-24 33.03 239 B3PUN8.1 RecName: Full=Ribonuclease 3 1; AltName: Full=Ribonuclease III... Synechocysti... NA 1111708 99.0 99.0 90% 3e-24 33.18 231 P74368.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus myc... NA 315730 99.4 99.4 96% 3e-24 33.77 245 A9VT87.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chloroflexus... NA 324602 99.4 99.4 90% 3e-24 29.11 244 A9WJ69.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Neisseria go... NA 521006 99.0 99.0 84% 3e-24 33.33 239 B4RJT7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Alkalihaloba... NA 66692 99.4 99.4 92% 3e-24 30.91 260 Q5WFM6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Yersinia ent... NA 393305 98.6 98.6 97% 4e-24 34.38 226 A1JKK3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rhizobium et... NA 347834 98.6 98.6 94% 4e-24 33.03 239 Q2KAE3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacillus sub... NA 224308 99.0 99.0 98% 4e-24 31.33 249 P51833.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rhizobium le... NA 216596 98.6 98.6 94% 5e-24 33.03 239 Q1MJ54.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Cereibacter ... NA 349101 98.2 98.2 94% 5e-24 30.59 229 A3PGF8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Neisseria go... NA 242231 98.2 98.2 84% 7e-24 33.33 239 Q5F9X7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Rhodobacter ... NA 1061 97.4 97.4 97% 1e-23 30.36 228 Q52698.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III... Neisseria me... NA 604162 97.8 97.8 96% 1e-23 34.39 239 C9X0M5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Candidatus P... NA 482235 96.3 96.3 91% 2e-23 32.41 225 B3R075.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Neisseria me... NA 122587 96.3 96.3 84% 4e-23 32.81 239 Q9JVD3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Agrobacteriu... NA 311403 96.3 96.3 94% 4e-23 32.72 239 B9JC73.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Streptococcu... NA 210007 95.9 95.9 97% 5e-23 32.91 231 Q8DT66.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mesoplasma f... NA 265311 95.9 95.9 99% 5e-23 32.92 231 Q6F1N5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Latilactobac... NA 314315 95.1 95.1 90% 8e-23 29.82 230 Q38XR8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Verminephrob... NA 391735 94.7 94.7 90% 2e-22 30.57 247 A1WMW1.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Dinoroseobac... NA 398580 94.0 94.0 81% 2e-22 31.75 229 A8LLD9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Anaplasma ph... NA 212042 94.0 94.0 96% 2e-22 30.63 236 Q2GIW0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycolicibact... NA 246196 94.0 94.0 90% 2e-22 33.95 230 A0QV20.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mesorhizobiu... NA 266835 92.4 92.4 87% 7e-22 29.41 221 Q985A6.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycobacteriu... NA 272631 92.8 92.8 96% 9e-22 33.48 238 O69469.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Limosilactob... NA 334390 91.7 91.7 97% 2e-21 28.57 232 B2GD42.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycobacteriu... NA 233413 89.7 89.7 90% 1e-20 34.10 240 P66667.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Lactobacillu... NA 272621 89.4 89.4 90% 1e-20 34.42 228 Q5FJJ7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlorobium c... NA 340177 89.4 89.4 95% 2e-20 28.38 248 Q3AQ14.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycobacteriu... NA 262316 88.2 88.2 90% 4e-20 33.64 237 Q73VL8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Azorhizobium... NA 438753 88.2 88.2 94% 4e-20 34.09 235 A8I3B5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Corynebacter... NA 196164 88.6 88.6 88% 4e-20 31.88 247 Q8FP16.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Corynebacter... NA 306537 88.2 88.2 90% 4e-20 30.00 244 Q4JUY7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Corynebacter... NA 257309 88.6 88.6 91% 4e-20 30.37 249 Q6NGH3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Lactobacillu... NA 257314 87.8 87.8 90% 5e-20 32.24 226 Q74IP8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Zymomonas mo... NA 264203 87.8 87.8 97% 8e-20 28.70 246 Q9Z5U2.3 RecName: Full=Putative protein A464R [Paramecium bursaria... Paramecium b... NA 10506 87.0 87.0 93% 2e-19 31.31 275 Q98514.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Leifsonia xy... NA 281090 86.3 86.3 92% 2e-19 33.02 237 Q6AFJ4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlamydia pn... NA 83558 86.3 86.3 94% 2e-19 30.94 237 Q9Z9C7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlamydia tr... NA 471472 85.9 85.9 95% 3e-19 33.33 231 B0B7L3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycoplasma c... NA 340047 85.9 85.9 91% 3e-19 30.41 232 Q2SRZ8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlamydia tr... NA 471473 85.9 85.9 95% 3e-19 33.33 231 B0BBS8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlorobaculu... NA 194439 85.9 85.9 91% 6e-19 30.88 272 Q8KAN7.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlamydia mu... NA 243161 84.7 84.7 95% 8e-19 32.60 232 Q9PK97.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bifidobacter... NA 206672 84.7 84.7 96% 9e-19 29.96 242 Q8G7H1.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Zunongwangia... NA 655815 84.7 84.7 74% 1e-18 34.10 243 D5BDP9.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Nocardia far... NA 247156 84.3 84.3 86% 1e-18 33.98 240 Q5YS08.1 RecName: Full=Ribonuclease 3 2; AltName: Full=Ribonuclease III... Nostoc sp. P... NA 103690 84.3 84.3 91% 1e-18 30.81 242 Q8YPT4.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlamydia fe... NA 264202 84.0 84.0 94% 1e-18 33.33 237 Q253V2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlamydia tr... NA 272561 83.6 83.6 95% 2e-18 32.90 231 O84299.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Limosilactob... NA 557436 83.6 83.6 95% 2e-18 29.18 233 A5VKP2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlamydia ab... NA 218497 81.6 81.6 95% 1e-17 31.42 237 Q5L6E3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Tropheryma w... NA 203267 80.9 80.9 85% 1e-17 30.81 223 Q83FY2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Sphingopyxis... NA 317655 80.9 80.9 90% 2e-17 30.77 226 Q1GTU3.1 RecName: Full=Ribonuclease 3 2; AltName: Full=Ribonuclease III... Synechocysti... NA 1111708 80.5 80.5 76% 3e-17 31.87 244 Q55637.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Gloeobacter ... NA 251221 80.5 80.5 86% 3e-17 31.00 242 Q7NH89.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Chlamydia ca... NA 227941 80.1 80.1 94% 5e-17 32.16 237 Q823R4.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycoplasmops... NA 262723 79.7 79.7 88% 6e-17 32.54 231 Q4A589.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Pelodictyon ... NA 319225 80.1 80.1 82% 7e-17 34.20 276 Q3B6L3.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Oenococcus o... NA 203123 78.2 78.2 92% 2e-16 28.70 231 Q04GL2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Corynebacter... NA 196627 78.2 78.2 91% 3e-16 31.31 247 Q8NNV6.1 RecName: Full=Endoribonuclease Dicer homolog 2; AltName:... Arabidopsis ... thale cress 3702 79.3 79.3 96% 7e-16 28.46 1388 Q3EBC8.2 RecName: Full=Ribonuclease 3 1; AltName: Full=Ribonuclease III... Nostoc sp. P... NA 103690 76.3 76.3 85% 1e-15 31.37 228 Q8Z023.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Caulobacter ... NA 366602 75.5 75.5 90% 2e-15 31.28 232 B0T3I0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacteroides ... NA 295405 75.9 75.9 92% 3e-15 29.03 290 Q64ZV9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacteroides ... NA 272559 75.9 75.9 92% 3e-15 29.03 290 Q5LIS2.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Phocaeicola ... NA 435590 75.9 75.9 91% 4e-15 32.73 308 A6KZ76.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycoplasma m... NA 272632 73.9 73.9 91% 8e-15 31.96 232 Q6MTC9.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycoplasma g... NA 710128 75.9 75.9 71% 8e-15 33.33 655 D3FH24.1 RecName: Full=Endoribonuclease dcr-1; Contains: RecName:... Caenorhabdit... NA 6239 73.9 73.9 60% 5e-14 29.51 1910 P34529.3 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Flavobacteri... NA 402612 71.6 71.6 53% 6e-14 33.33 246 A6GW45.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycoplasma p... NA 722438 72.0 72.0 45% 6e-14 38.68 282 E1QCT1.1 RecName: Full=Endoribonuclease Dicer [Gallus gallus] Gallus gallus chicken 9031 73.2 73.2 60% 9e-14 26.44 1921 Q25BN1.3 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Leuconostoc ... NA 203120 70.9 70.9 95% 1e-13 27.51 236 Q03VW5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Spiroplasma ... NA 2133 70.9 70.9 91% 1e-13 29.82 248 Q53844.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycoplasma g... NA 243273 71.2 71.2 46% 1e-13 37.04 262 P47607.1 RecName: Full=Endoribonuclease Dicer [Cricetulus griseus] Cricetulus g... Chinese hamster 10029 71.6 71.6 60% 3e-13 26.44 1917 A0MQH0.3 RecName: Full=Endoribonuclease Dicer; AltName: Full=Helicase... Homo sapiens human 9606 71.2 71.2 60% 4e-13 26.44 1922 Q9UPY3.3 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Moorella the... NA 264732 69.3 69.3 74% 4e-13 27.84 233 Q2RJX2.1 RecName: Full=Endoribonuclease Dicer [Bos taurus] Bos taurus cattle 9913 71.2 71.2 60% 4e-13 26.44 1923 Q6TUI4.3 RecName: Full=Endoribonuclease Dicer; AltName:... Mus musculus house mouse 10090 71.2 71.2 60% 5e-13 26.44 1916 Q8R418.3 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Bacteroides ... NA 226186 70.1 70.1 92% 5e-13 29.95 311 Q8A2E8.2 RecName: Full=Probable ribonuclease 3; AltName:... Acanthamoeba... NA 212035 70.5 133 95% 5e-13 27.08 538 Q5UQT7.1 RecName: Full=Endoribonuclease Dicer [Danio rerio] Danio rerio zebrafish 7955 70.5 70.5 58% 7e-13 26.32 1865 Q6TV19.2 RecName: Full=Endoribonuclease Dcr-1; Short=Protein dicer-1... Drosophila m... fruit fly 7227 70.5 70.5 61% 7e-13 26.14 2249 Q9VCU9.1 RecName: Full=Endoribonuclease Dicer [Xenopus tropicalis] Xenopus trop... tropical cla... 8364 70.5 70.5 60% 8e-13 26.44 1893 B3DLA6.2 RecName: Full=Dicer-like protein 1; Includes: RecName:... Cryphonectri... chestnut bli... 5116 69.3 69.3 59% 2e-12 26.40 1548 Q2VF19.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Candidatus A... NA 511995 67.8 67.8 92% 2e-12 28.64 261 B6YQI6.1 RecName: Full=Ribonuclease 3; AltName: Full=Protein drosha;... Caenorhabdit... NA 6239 68.9 111 98% 2e-12 27.78 1086 O01326.2 RecName: Full=Protein Dicer; AltName: Full=Cell cycle control... Schizosaccha... NA 284812 68.2 68.2 52% 5e-12 28.38 1374 Q09884.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Ureaplasma p... NA 273119 66.2 66.2 92% 6e-12 29.15 236 Q9PQT8.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Prochlorococ... NA 167539 66.2 66.2 96% 6e-12 27.23 249 G3XCR8.1 RecName: Full=Endoribonuclease Dicer homolog 3a; AltName:... Oryza sativa... Japanese rice 39947 67.0 108 99% 1e-11 26.77 1651 Q5N870.1 RecName: Full=Dicer-like protein 1; Includes: RecName:... Aspergillus ... NA 510516 67.0 67.0 40% 1e-11 41.94 1523 Q2U6C4.2 RecName: Full=Ribonuclease 3; AltName: Full=Protein drosha;... Caenorhabdit... NA 6238 66.6 110 82% 1e-11 27.84 1061 Q61XX9.1 RecName: Full=Dicer-like protein 1; Includes: RecName:... Coccidioides... NA 246410 66.2 66.2 61% 2e-11 28.24 1500 Q1DKI1.3 RecName: Full=Ribonuclease 3-like protein 2; AltName:... Arabidopsis ... thale cress 3702 65.5 65.5 61% 2e-11 28.40 391 Q9LTQ0.1 RecName: Full=Ribonuclease 3-like protein 3; AltName:... Oryza sativa... Japanese rice 39947 64.3 64.3 58% 5e-11 31.65 299 Q69KJ0.1 RecName: Full=Dicer-like protein 1; Includes: RecName:... Pyricularia ... NA 242507 64.7 64.7 42% 6e-11 34.02 1591 A4RKC3.2 RecName: Full=Ribonuclease 3; AltName: Full=Protein Drosha;... Homo sapiens human 9606 64.3 116 97% 1e-10 25.11 1374 Q9NRR4.2 RecName: Full=Ribonuclease 3; AltName: Full=Protein Drosha;... Mus musculus house mouse 10090 63.5 115 97% 2e-10 24.35 1373 Q5HZJ0.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Leuconostoc ... NA 349519 61.6 61.6 85% 2e-10 25.60 233 B1N016.1 RecName: Full=Endoribonuclease Dicer homolog 4; AltName:... Oryza sativa... Japanese rice 39947 63.2 63.2 95% 2e-10 24.58 1657 A7LFZ6.1 RecName: Full=Dicer-like protein 1; Includes: RecName:... Aspergillus ... NA 341663 63.2 63.2 40% 2e-10 37.23 1519 Q0CW42.2 RecName: Full=Ribonuclease 3-like protein 2; AltName:... Oryza sativa... Japanese rice 39947 61.6 61.6 72% 4e-10 30.46 317 Q6ATG6.2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Mycoplasma m... NA 267748 60.5 60.5 91% 7e-10 31.31 246 Q6KHN3.1 RecName: Full=Dicer-like protein 2; Includes: RecName:... Aspergillus ... NA 227321 61.2 103 52% 1e-09 36.78 1429 P0C5H7.1 RecName: Full=Dicer-like protein 4 [Arabidopsis thaliana] Arabidopsis ... thale cress 3702 60.5 60.5 98% 2e-09 23.41 1702 P84634.2 RecName: Full=Endoribonuclease Dicer homolog 1; AltName:... Arabidopsis ... thale cress 3702 60.5 98.6 61% 2e-09 27.95 1909 Q9SP32.2 RecName: Full=Dicer-like protein 1; Includes: RecName:... Aspergillus ... NA 344612 60.5 60.5 40% 2e-09 38.30 1534 A1CBC9.2 RecName: Full=Dicer-like protein 2; Includes: RecName:... Aspergillus ... NA 510516 59.7 59.7 97% 3e-09 22.97 1377 Q2UNX5.1 RecName: Full=Dicer-like protein 1; Includes: RecName:... Aspergillus ... NA 425011 59.3 59.3 40% 5e-09 36.56 1525 A2RAF3.2 RecName: Full=Endoribonuclease Dicer homolog 3; AltName:... Arabidopsis ... thale cress 3702 57.0 57.0 59% 2e-08 27.39 1580 Q9LXW7.2 RecName: Full=Endoribonuclease Dicer homolog 2b; AltName:... Oryza sativa... Japanese rice 39947 56.6 56.6 72% 3e-08 25.13 1377 Q69LX2.2 RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:... Oryza sativa... Japanese rice 39947 56.2 56.2 59% 5e-08 26.38 1637 Q7XD96.2 RecName: Full=Dicer-like protein 1; Includes: RecName:... Chaetomium g... NA 306901 55.5 55.5 52% 8e-08 30.33 1607 Q2H0G2.2 RecName: Full=Dicer-like protein 2; Includes: RecName:... Aspergillus ... NA 331117 55.5 96.7 53% 8e-08 37.65 1388 A1D9Z6.1 RecName: Full=Endoribonuclease Dicer homolog 2a; AltName:... Oryza sativa... Japanese rice 39947 55.5 55.5 72% 9e-08 24.74 1410 Q10HL3.1 RecName: Full=Dicer-like protein 2; Includes: RecName:... Parastagonos... NA 321614 55.1 55.1 34% 1e-07 38.75 1399 Q0UL22.2 RecName: Full=Dicer-like protein 1; Includes: RecName:... Neurospora c... NA 367110 55.1 55.1 48% 1e-07 30.36 1584 Q7S8J7.1 RecName: Full=Dicer-like protein 2; Includes: RecName:... Aspergillus ... NA 330879 54.3 94.7 53% 2e-07 31.11 1388 Q4WA22.2 RecName: Full=Ribonuclease 3-like protein 1; AltName:... Oryza sativa... Japanese rice 39947 53.1 53.1 85% 3e-07 26.03 256 Q5JK90.1 RecName: Full=Dicer-like protein 1; Includes: RecName:... Aspergillus ... NA 331117 53.9 53.9 54% 3e-07 25.64 1538 A1DE13.1 RecName: Full=Dicer-like protein 2; Includes: RecName:... Aspergillus ... NA 344612 53.1 95.5 64% 5e-07 23.87 1389 A1C9M6.1 RecName: Full=Dicer-like protein 2; Includes: RecName:... Neurospora c... NA 367110 53.1 53.1 27% 5e-07 45.45 1534 Q7SCC1.4 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Treponema su... NA 869209 52.4 52.4 55% 6e-07 29.37 369 F2NV13.1 RecName: Full=Ribonuclease 3-like protein 3; AltName:... Arabidopsis ... thale cress 3702 52.8 52.8 61% 7e-07 25.00 957 Q9FKF0.1 RecName: Full=Endoribonuclease Dicer homolog 1; AltName:... Oryza sativa... Japanese rice 39947 52.8 52.8 98% 7e-07 24.10 1883 Q8LMR2.1 RecName: Full=Dicer-like protein 1; Includes: RecName:... Aspergillus ... NA 330879 52.4 52.4 41% 9e-07 33.33 1537 Q4WVE3.3 RecName: Full=Dicer-like protein 2; Includes: RecName:... Pyricularia ... NA 242507 51.2 96.7 53% 2e-06 38.20 1485 A4RHU9.3 RecName: Full=Dicer-like protein 2; Includes: RecName:... Aspergillus ... NA 341663 49.7 89.7 54% 7e-06 35.29 1377 Q0CEI2.2 RecName: Full=Dicer-like protein 1; Includes: RecName:... Parastagonos... NA 321614 49.7 49.7 59% 7e-06 25.30 1522 Q0UI93.2 RecName: Full=Dicer-like protein 2-1; Includes: RecName:... Aspergillus ... NA 425011 49.7 88.2 52% 8e-06 28.97 1387 A2R345.2 RecName: Full=Dicer-like protein 2; Includes: RecName:... Coccidioides... NA 246410 48.1 87.8 54% 2e-05 36.14 1435 Q1DW80.3 RecName: Full=Putative ribonuclease 3; AltName:... Frog virus 3... NA 654924 47.8 47.8 45% 2e-05 30.28 371 Q6GZP5.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Roseburia ho... NA 585394 46.2 46.2 92% 7e-05 22.92 357 G2SYN4.1 RecName: Full=RISC-loading complex subunit tarbp2 [Tetraodon... Tetraodon ni... spotted gree... 99883 45.8 45.8 28% 9e-05 33.85 345 Q4SS66.1 RecName: Full=Interferon-inducible double-stranded RNA-depende... Xenopus laevis African claw... 8355 45.4 45.4 26% 1e-04 38.33 298 Q91836.1 RecName: Full=Interferon-inducible double-stranded RNA-depende... Xenopus laevis African claw... 8355 45.4 84.7 28% 1e-04 38.33 309 Q7ZYA5.1 RecName: Full=RISC-loading complex subunit tarbp2 [Danio rerio] Danio rerio zebrafish 7955 45.4 45.4 28% 1e-04 33.85 346 Q7SXR1.1 RecName: Full=Interferon-inducible double-stranded RNA-depende... Danio rerio zebrafish 7955 45.1 45.1 28% 1e-04 37.50 282 B0V3F8.2 RecName: Full=RISC-loading complex subunit tarbp2 [Xenopus... Xenopus trop... tropical cla... 8364 45.1 45.1 26% 2e-04 36.67 351 Q5BJ52.2 RecName: Full=RISC-loading complex subunit TARBP2 [Rattus... Rattus norve... Norway rat 10116 45.1 45.1 26% 2e-04 36.67 365 Q3SWU0.1 RecName: Full=Dicer-like protein 2; Includes: RecName:... Cryphonectri... chestnut bli... 5116 45.4 45.4 36% 2e-04 31.33 1451 Q2VF18.1 RecName: Full=RISC-loading complex subunit tarbp2 [Xenopus... Xenopus laevis African claw... 8355 45.1 45.1 26% 2e-04 36.67 351 Q6GPZ1.2 RecName: Full=RISC-loading complex subunit TARBP2; AltName:... Homo sapiens human 9606 44.7 44.7 26% 2e-04 36.67 366 Q15633.3 RecName: Full=RISC-loading complex subunit TARBP2 [Bos taurus] Bos taurus cattle 9913 44.7 44.7 26% 2e-04 36.67 366 Q0IIG6.2 RecName: Full=RISC-loading complex subunit TARBP2; AltName:... Mus musculus house mouse 10090 44.7 44.7 26% 3e-04 36.67 365 P97473.2 RecName: Full=Double-strand-specific pac1 ribonuclease; AltNam... Schizosaccha... NA 284812 44.3 44.3 41% 3e-04 28.57 363 P22192.1 RecName: Full=DRBM domain-containing protein 340R [Invertebrat... Invertebrate... NA 176652 43.1 43.1 37% 3e-04 33.71 173 Q91FI4.1 RecName: Full=Putative ribonuclease 3; AltName:... Invertebrate... NA 176652 43.5 43.5 87% 5e-04 25.56 292 O55748.1 RecName: Full=Protein NUCLEAR FUSION DEFECTIVE 2; Flags:... Arabidopsis ... thale cress 3702 42.7 42.7 53% 6e-04 27.78 191 Q9FYL8.1 RecName: Full=Double-stranded RNA-binding protein Staufen... Aplysia cali... California s... 6500 43.5 43.5 28% 8e-04 33.87 950 Q3L1C9.1 RecName: Full=Double-stranded RNA-binding protein Staufen... Xenopus trop... tropical cla... 8364 42.0 42.0 38% 0.002 28.24 624 Q5M7M7.1 RecName: Full=Dicer-like protein 2-2; Includes: RecName:... Aspergillus ... NA 425011 42.0 42.0 35% 0.003 29.63 1362 A2QX45.2 RecName: Full=Double-stranded RNA-binding protein Staufen... Homo sapiens human 9606 41.2 41.2 28% 0.004 30.65 577 O95793.2 RecName: Full=Double-stranded RNA-binding protein Staufen... Danio rerio zebrafish 7955 40.4 40.4 26% 0.006 35.59 606 Q7ZW47.2 RecName: Full=Interferon-inducible double-stranded RNA-depende... Homo sapiens human 9606 40.0 40.0 26% 0.007 33.90 313 O75569.1 RecName: Full=Interferon-inducible double-stranded RNA-depende... Mus musculus house mouse 10090 40.0 40.0 26% 0.007 33.90 313 Q9WTX2.1 RecName: Full=Interferon-inducible double-stranded RNA-depende... Rattus norve... Norway rat 10116 40.0 40.0 26% 0.007 33.90 313 Q4V8C7.1 RecName: Full=Interferon-inducible double-stranded RNA-depende... Bos taurus cattle 9913 40.0 40.0 26% 0.008 33.90 313 Q2HJ92.1 RecName: Full=Double-stranded RNA-binding protein Staufen... Ailuropoda m... giant panda 9646 40.4 40.4 28% 0.008 30.65 580 D2GVP7.1 RecName: Full=Maternal effect protein staufen [Drosophila... Drosophila m... fruit fly 7227 40.4 40.4 38% 0.008 32.14 1026 P25159.2 RecName: Full=Double-stranded RNA-binding protein Staufen... Rattus norve... Norway rat 10116 40.0 40.0 38% 0.010 29.41 571 Q68SB1.1 RecName: Full=Double-stranded RNA-binding protein Staufen... Mus musculus house mouse 10090 39.3 39.3 28% 0.018 30.65 487 Q9Z108.1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;... Saccharomyce... NA 559292 38.9 38.9 40% 0.021 28.00 471 Q02555.1 RecName: Full=Interferon-induced, double-stranded RNA-activate... Rattus norve... Norway rat 10116 38.5 38.5 22% 0.029 40.00 513 Q63184.1 RecName: Full=Double-stranded RNA-binding protein Staufen... Mus musculus house mouse 10090 38.1 38.1 38% 0.036 28.24 570 Q8CJ67.1 RecName: Full=Double-stranded RNA-binding protein Staufen... Homo sapiens human 9606 38.1 38.1 38% 0.040 28.24 570 Q9NUL3.2 RecName: Full=Putative ribonuclease 3 [Invertebrate iridescent... Invertebrate... NA 345201 37.7 37.7 86% 0.044 25.93 333 Q196V9.1 RecName: Full=Double-stranded RNA-specific adenosine deaminase... Rattus norve... Norway rat 10116 38.1 38.1 23% 0.048 43.40 1175 P55266.1 RecName: Full=Double-stranded RNA-specific editase B2; AltName... Rattus norve... Norway rat 10116 38.1 38.1 21% 0.049 38.30 746 P97616.1 RecName: Full=Double-stranded RNA-specific editase B2; AltName... Mus musculus house mouse 10090 38.1 38.1 21% 0.050 38.30 745 Q9JI20.2 Alignments: >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Aquifex aeolicus VF5] Sequence ID: O67082.1 Length: 221 Range 1: 1 to 221 Score:439 bits(1128), Expect:4e-158, Method:Compositional matrix adjust., Identities:221/221(100%), Positives:221/221(100%), Gaps:0/221(0%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP Sbjct 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDS 120 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDS Sbjct 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDS 120 Query 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH Sbjct 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 Query 181 KKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE 221 KKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE Sbjct 181 KKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Hydrogenobaculum sp. Y04AAS1] Sequence ID: B4U7T8.1 Length: 232 Range 1: 1 to 228 Score:245 bits(625), Expect:2e-81, Method:Compositional matrix adjust., Identities:124/228(54%), Positives:162/228(71%), Gaps:7/228(3%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK-EHYETLEFLGDALVNFFIVDLLVQYS 59 M E LE+K+GY FKDK+L++KA TH+S+SK E+YE LEFLGDALVNF V++LV+ Sbjct 1 MDSFELLEEKIGYRFKDKNLVKKAFTHISFSKSSENYEVLEFLGDALVNFMTVNILVEAF 60 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALW 113 PNK+EG LS LK++LISEEF LA+ L K+I I +G N +I+ DVFEA W Sbjct 61 PNKKEGELSQLKSFLISEEFLASLAKSLNFEKYILISKGEELKGSNKNPSILCDVFEAFW 120 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 AA+YIDSG D T+ LF FK IL + +K+DYKT LQEITQK+WKERP Y +I Sbjct 121 AAIYIDSGYDCKLTKSLFEHHFKSQILEMVNSNSLKQDYKTALQEITQKKWKERPIYNVI 180 Query 174 SVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE 221 SVEGP H+K F VE K+ RT G+G SKK AEQ AA+ ++++++++E Sbjct 181 SVEGPEHRKTFTVECLFKDLRTTGKGNSKKYAEQEAAKNMLQIIQDNE 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Sulfurovum sp. NBC37-1] Sequence ID: A6QCJ0.1 Length: 223 Range 1: 1 to 214 Score:143 bits(361), Expect:1e-41, Method:Compositional matrix adjust., Identities:86/218(39%), Positives:131/218(60%), Gaps:12/218(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M QLEK+L YTFKDK L+ +ALTH SY K + E LEFLGDA+++ + + L + P Sbjct 1 MNDYSQLEKRLNYTFKDKQLIIEALTHKSYKKPYNNERLEFLGDAVLDLIVGEYLFKKFP 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 EG LS ++A L++E F LLA+K++L +I + G+ +++ + FEA+ Sbjct 61 KSDEGILSKIRASLVNESGFTLLARKIDLGSYIYLSLAEENNNGRDKPSLLSNAFEAIIG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVY+++G D +E+ KL E+ I + KDYKT LQE+TQ P Y ++ Sbjct 121 AVYLEAGLDT--AKEISIKLL-EECHPKIDLQSLSKDYKTALQELTQATHAVTPGYEMLG 177 Query 175 VEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAA 210 GP HKK+F + + + +T+ +GKSKK+A+Q+AA Sbjct 178 SSGPDHKKEFEIAVTL-DNKTIATAKGKSKKDAQQKAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas mendocina ymp] Sequence ID: A4XSC4.1 Length: 229 Range 1: 5 to 212 Score:143 bits(360), Expect:2e-41, Method:Compositional matrix adjust., Identities:84/212(40%), Positives:128/212(60%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE+KLG++FKD+ L+ ALTH S++ + + E LEFLGDA++NF + L + P R Sbjct 5 LSRLERKLGHSFKDQDLMILALTHRSFAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E +LA+ EL +++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLAVLARGFELGEYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G DA R L + + D L+ I KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDAGMDAARERVLDWLSGELDGLTLID---TNKDPKTRLQEFLQSRACELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F+VE ++ +TLG+G S++ AEQ Sbjct 181 EPHCRTFMVECQVALLNEKTLGQGGSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Wolinella succinogenes DSM 1740] Sequence ID: Q7M840.1 Length: 238 Range 1: 1 to 214 Score:141 bits(355), Expect:2e-40, Method:Compositional matrix adjust., Identities:86/218(39%), Positives:133/218(61%), Gaps:12/218(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M+ +E+ EK+LGY F++K+LL +ALTH SY K + E LEFLGDA+++ I + L P Sbjct 1 MESIEEFEKRLGYRFQNKNLLIEALTHKSYKKPYNNERLEFLGDAVLDLVIGEFLFLKFP 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 EG LS ++A L++E+ F LA+++ L + I I +G+ +++ + FEA Sbjct 61 KADEGELSKMRASLVNEKGFAKLAERVSLGRHIFISNAEENNKGREKPSLLSNAFEATMG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+++G + RE+ ++L E + I G + +DYKT LQE+TQ ++ E PEY ++ Sbjct 121 AIYLETG--LSVVREVVHRLLDE-VYPKIDLGSLFRDYKTALQELTQAKFGETPEYVILG 177 Query 175 VEGPHHKKKFIVEAKI--KEYRTLGEGKSKKEAEQRAA 210 GP HKK+F V + EY G SKKEA+Q AA Sbjct 178 SSGPDHKKEFEVAVCVLGSEY-ARACGSSKKEAQQEAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Caldanaerobacter subterraneus subsp. tengcongensis MB4] Sequence ID: Q8R9W3.1 Length: 228 Range 1: 1 to 219 Score:139 bits(349), Expect:1e-39, Method:Compositional matrix adjust., Identities:89/222(40%), Positives:130/222(58%), Gaps:15/222(6%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYS-----KKEHYETLEFLGDALVNFFIVDLLVQ 57 ML LE+K+ Y FKDK+LL +ALTH S++ +K E LEFLGD++++ I + L + Sbjct 1 MLTYLEQKINYEFKDKTLLLEALTHSSWAHEGKNEKVSNERLEFLGDSVLSLVISEYLYK 60 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFEA 111 + EG LS +A ++ E A+K+EL F+R I G+ ++I+ D EA Sbjct 61 NRKDLEEGSLSKYRAEIVCEPSLARCARKIELGSFLRMGKGEEISGGRDRDSILADAMEA 120 Query 112 LWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYR 171 L AAVY+D G +A R + LFKE I+ + +G + +DYKT LQE+ Q + Y Sbjct 121 LLAAVYLDGGLEA--VRRVILDLFKE-IIDEVLKGIIYRDYKTRLQEVVQSMEVGKITYE 177 Query 172 LISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEE 212 L+ GP H K F+ + KI + +G+GKSKKE+EQ AA E Sbjct 178 LVEEIGPDHNKTFVTQVKIGDVVLGIGQGKSKKESEQAAAME 219 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas aeruginosa LESB58] Sequence ID: B7UYX2.1 Length: 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas aeruginosa UCBPP-PA14] Sequence ID: Q02HS2.1 Length: 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas aeruginosa PAO1] Sequence ID: Q9XCX9.1 Length: 229 Range 1: 5 to 212 Score:139 bits(349), Expect:1e-39, Method:Compositional matrix adjust., Identities:81/212(38%), Positives:125/212(58%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L++LE+KLGYTFKD+ L+ ALTH SY+ + + E LEFLGDA++NF I + L + P R Sbjct 5 LDRLERKLGYTFKDRDLMVLALTHRSYAGRNN-ERLEFLGDAILNFVIGEALFHHFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LLA+ E+ ++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLALLARGFEVGDYLRLGSGELKSGGFRRESILADAMEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G D+ R + + + L+ + KD KT LQE Q R + P Y ++ ++G Sbjct 124 LDTGMDSARERIIAWLGPQLRELTPVD---TNKDPKTRLQEFLQSRGCDLPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F V+ ++ +T G G S++ AEQ Sbjct 181 EPHCRTFFVDCEVALLSDKTHGHGGSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas syringae pv. syringae B728a] Sequence ID: Q4ZPE1.1 Length: 229 Range 1: 5 to 212 Score:139 bits(349), Expect:1e-39, Method:Compositional matrix adjust., Identities:82/212(39%), Positives:126/212(59%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE++LGYTFKD+ L+ ALTH S++ + + E LEFLGDA++NF + L + P R Sbjct 5 LSRLERQLGYTFKDQELMVLALTHRSFAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LLA+ +L +++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G +A R L + + D L+ + KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDAGMEAARERVLAWLTTEFDSLTLVD---TNKDPKTRLQEFLQSRACELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE +I ++ G+G S++ AEQ Sbjct 181 EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Nitratiruptor sp. SB155-2] Sequence ID: A6Q1H0.1 Length: 226 Range 1: 1 to 195 Score:138 bits(347), Expect:2e-39, Method:Compositional matrix adjust., Identities:83/198(42%), Positives:120/198(60%), Gaps:9/198(4%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MK LE+ EKKLGY+F+DK LL++ALTH SY + E LEFLGDA+++ + + L + P Sbjct 1 MKQLEEFEKKLGYSFEDKKLLKEALTHKSYKSPVNNERLEFLGDAVLDLVVGEYLFKKFP 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 EG LS L+A L++EE F LAQKL++ K+I I +G+ +++ + FEA+ Sbjct 61 KANEGELSKLRASLVNEEGFAKLAQKLDIGKYIFISQAEENNQGRTKPSLLSNAFEAVMG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y++ G + REL KL E+ I + KD+KT LQE TQ + P Y+L+ Sbjct 121 AIYLEKGLEK--VRELSLKLL-EEAYPKIDLDSLFKDFKTALQEFTQAHYGITPTYKLLG 177 Query 175 VEGPHHKKKFIVEAKIKE 192 GP HKK+F V + E Sbjct 178 SSGPDHKKEFEVAVLLHE 195 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas aeruginosa PA7] Sequence ID: A6VAK6.1 Length: 229 Range 1: 5 to 212 Score:138 bits(347), Expect:2e-39, Method:Compositional matrix adjust., Identities:81/212(38%), Positives:125/212(58%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L++LE+KLGYTFKD+ L+ ALTH SY+ + + E LEFLGDA++NF I + L + P R Sbjct 5 LDRLERKLGYTFKDQDLMVLALTHRSYAGRNN-ERLEFLGDAILNFVIGEALFHHFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LLA+ E+ ++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLALLARGFEVGDYLRLGSGELKSGGFRRESILADAMEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G D+ R + + + L+ + KD KT LQE Q R + P Y ++ ++G Sbjct 124 LDTGMDSARERIIAWLGPQLRELTPVD---TNKDPKTRLQEFLQSRGCDLPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F V+ ++ +T G G S++ AEQ Sbjct 181 EPHCRTFFVDCEVALLSDKTHGHGGSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas savastanoi pv. phaseolicola 1448A] Sequence ID: Q48EV3.1 Length: 229 Range 1: 5 to 212 Score:137 bits(346), Expect:3e-39, Method:Compositional matrix adjust., Identities:82/212(39%), Positives:125/212(58%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE++LGYTFKD+ L+ ALTH S++ + + E LEFLGDA++NF + L + P R Sbjct 5 LSRLERQLGYTFKDQELMVLALTHRSFAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LLA+ +L +++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G +A R L + + D L+ + KD KT LQE Q R E P Y ++ + G Sbjct 124 LDAGMEAARERVLAWLTTEFDSLTLVD---TNKDPKTRLQEFLQSRACELPRYEVVDIHG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE +I ++ G+G S++ AEQ Sbjct 181 EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Haemophilus influenzae PittEE] Sequence ID: A5UBC4.1 Length: 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Haemophilus influenzae 86-028NP] Sequence ID: Q4QPN0.1 Length: 227 Range 1: 1 to 225 Score:137 bits(345), Expect:3e-39, Method:Compositional matrix adjust., Identities:83/229(36%), Positives:137/229(59%), Gaps:15/229(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L++LE+K+GY F D +LL++ALTH S + +H E LEFLGD+++NF I + L P Sbjct 1 MNHLDRLERKIGYCFNDIALLKQALTHRS-AATQHNERLEFLGDSILNFTIAEALYHQFP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ E +LA++ EL ++ + G++ E+I+ D EA+ Sbjct 60 RCNEGELSRMRATLVREPTLAILARQFELGDYMSLGSGELKNGGFRRESILADCVEAIIG 119 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+ +D G T ++ +++ +L+ IK G +KD KT LQE Q + P Y +++ Sbjct 120 AMSLDQG--LAVTTQVIRNWYQQ-LLAEIKPGDNQKDAKTRLQEYLQGKHLPLPTYEVVN 176 Query 175 VEGPHHKKKFIVEAKIKEY----RT-LGEGKSKKEAEQRAAEELIKLLE 218 ++G H + F VE K+K RT + +G S+++AEQ AAE+++K L+ Sbjct 177 IQGEAHCQIFTVECKVKSAGKIDRTFVAKGSSRRKAEQAAAEQILKELD 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Borrelia garinii subsp. bavariensis PBi] Sequence ID: Q660G7.1 Length: 245 Range 1: 18 to 242 Score:138 bits(347), Expect:3e-39, Method:Compositional matrix adjust., Identities:88/228(39%), Positives:129/228(56%), Gaps:15/228(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYS-----KKEHYETLEFLGDALVNFFIVDLLVQY 58 L + + L F + LL AL+H SYS K ++ E LEFLGD+++N I D L + Sbjct 18 LSEFLENLSIDFNNFDLLNTALSHSSYSNELDQKADNNERLEFLGDSVLNLIITDHLYKT 77 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEAL 112 PNK EG LS ++Y++SE+ + +A++++L +I + R G+ + I+ D EA Sbjct 78 YPNKSEGELSKARSYIVSEDSLSSIAREIDLGSYILLGRGEESNDGRNKKGILADAIEAF 137 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+DSG + E LF I G KDYK++LQE QK++K P Y+L Sbjct 138 VGAIYLDSG--FSMATEFVVGLFDMYIRLMFNRGDF-KDYKSLLQEYVQKKYKISPSYKL 194 Query 173 ISVEGPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLLEE 219 GP H K F VE + E + + G+GKSKKEAE RAAE +K +E+ Sbjct 195 DKEIGPDHDKVFCVELYVGEKFISNGKGKSKKEAEMRAAEVALKAMED 242 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas syringae pv. tomato str. DC3000] Sequence ID: Q87XG1.1 Length: 229 Range 1: 5 to 212 Score:137 bits(344), Expect:6e-39, Method:Compositional matrix adjust., Identities:81/212(38%), Positives:126/212(59%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE++LGYTFKD+ L+ ALTH S++ + + E LEFLGDA++NF + L + P R Sbjct 5 LSRLERQLGYTFKDQELMILALTHRSFAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LLA+ +L +++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G +A R L + + D L+ + KD KT LQE Q R + P Y ++ ++G Sbjct 124 LDAGMEAARERVLAWLTTEFDSLTLVD---TNKDPKTRLQEFLQSRACDLPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE +I ++ G+G S++ AEQ Sbjct 181 EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella amazonensis SB2B] Sequence ID: A1S3Y1.1 Length: 226 Range 1: 4 to 226 Score:136 bits(343), Expect:8e-39, Method:Compositional matrix adjust., Identities:84/227(37%), Positives:131/227(57%), Gaps:12/227(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY F D LLE+ALTH S S +H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLGYEFSDIRLLEQALTHRSASN-QHNERLEFLGDSILSIVISDALFHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + ++A++ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVRGDTLAVIAKEFKLGDYLNLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVY+D+ D R L + E L+ IK G +KD KT+LQE Q K PEY++ Sbjct 123 AVYLDA--DLETCRSLLLGWY-ETRLADIKPGVGQKDAKTLLQEYLQGMKKPLPEYQVTQ 179 Query 175 VEGPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLLEE 219 VEG H + F VE ++ + +G G S+++AEQ AA ++++LL + Sbjct 180 VEGEAHDQTFTVECRVTDLADAVVGVGSSRRKAEQMAAAQVLELLNQ 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Haemophilus influenzae PittGG] Sequence ID: A5UFI8.1 Length: 227 Range 1: 1 to 225 Score:136 bits(342), Expect:1e-38, Method:Compositional matrix adjust., Identities:83/229(36%), Positives:137/229(59%), Gaps:15/229(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L++LE+K+GY F D +LL++ALTH S + +H E LEFLGD+++NF I + L P Sbjct 1 MNHLDRLERKIGYRFNDIALLKQALTHRS-AATQHNERLEFLGDSILNFTIAEALYHQFP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ E +LA++ EL ++ + G++ E+I+ D EA+ Sbjct 60 RCNEGELSRMRATLVREPTLAILARQFELGDYMSLGSGELKNGGFRRESILADCVEAIIG 119 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+ +D G T ++ +++ +L+ IK G +KD KT LQE Q + P Y +++ Sbjct 120 AMSLDQG--LAVTTQVIRNWYQQ-LLAEIKPGDNQKDAKTRLQEYLQGKHLPLPTYEVVN 176 Query 175 VEGPHHKKKFIVEAKIKEY----RT-LGEGKSKKEAEQRAAEELIKLLE 218 ++G H + F VE K+K RT + +G S+++AEQ AAE+++K L+ Sbjct 177 IQGEAHCQIFTVECKVKSAGKIDRTFVAKGSSRRKAEQAAAEQILKELD 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Borreliella burgdorferi B31] Sequence ID: O51648.2 Length: 245 Range 1: 18 to 242 Score:136 bits(342), Expect:2e-38, Method:Compositional matrix adjust., Identities:90/230(39%), Positives:127/230(55%), Gaps:19/230(8%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYS-----KKEHYETLEFLGDALVNFFIVDLLVQY 58 L + + L F + LL AL H SYS K + E LEFLGD+++N I D L + Sbjct 18 LSKFLENLSIDFSNFDLLNTALCHSSYSNELDQKSSNNERLEFLGDSVLNLIITDHLYKT 77 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEAL 112 PNK EG LS ++Y++SE+ + +A+++ L +I + R G+ + I+ D EA Sbjct 78 YPNKSEGELSKARSYIVSEDSLSNIAREINLGSYILLGRGEESNDGRNKKGILADAIEAF 137 Query 113 WAAVYIDSGRDANFTR--ELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 A+Y+DSG F+R E LF I G KDYK++LQE QK++K P Y Sbjct 138 VGAIYLDSG----FSRATEFVVGLFDMYIRLMFNRGDF-KDYKSLLQEYVQKKYKISPSY 192 Query 171 RLISVEGPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLLEE 219 +L GP H K F VE + E + + G+GKSKKEAE RAAE +K +E Sbjct 193 KLDKEIGPDHDKVFCVELYVGENFISNGKGKSKKEAEMRAAEVALKAMEN 242 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Borreliella afzelii PKo] Sequence ID: Q0SMF0.1 Length: 245 Range 1: 18 to 242 Score:136 bits(342), Expect:2e-38, Method:Compositional matrix adjust., Identities:88/228(39%), Positives:128/228(56%), Gaps:15/228(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYS-----KKEHYETLEFLGDALVNFFIVDLLVQY 58 L + + L F + LL AL+H SYS K ++ E LEFLGD+++N I D L + Sbjct 18 LSEFLENLSIDFNNFDLLNTALSHSSYSNELDQKSDNNERLEFLGDSVLNLIITDHLYKT 77 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEAL 112 PNK EG LS ++Y++SE+ + +A++++L +I + R G+ + I+ D EA Sbjct 78 YPNKSEGELSKARSYIVSEDSLSSIAREIDLGSYILLGRGEESNDGRNKKGILADAIEAF 137 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+DSG E LF I G KDYK++LQE QK++K P Y+L Sbjct 138 VGAIYLDSG--FLIATEFVVGLFDMYIRLMFNRGDF-KDYKSLLQEYVQKKYKISPNYKL 194 Query 173 ISVEGPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLLEE 219 GP H K F VE + E + + G+GKSKKEAE RAAE +K +E+ Sbjct 195 DKEIGPDHDKVFCVELYVGEKFISNGKGKSKKEAEMRAAEVALKAMED 242 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Sequence ID: B0BUA6.1 Length: 223 Range 1: 3 to 217 Score:135 bits(340), Expect:2e-38, Method:Compositional matrix adjust., Identities:83/219(38%), Positives:132/219(60%), Gaps:12/219(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L+KKLGY F + L +ALTH S K + E LEFLGD+++NF I L + P Sbjct 3 LERLQKKLGYQFTNLDYLLQALTHRSAGAKNN-ERLEFLGDSILNFAIGKALFEKFPKAN 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ E+ +LA+K L +++++ G++ E+I+ D EA+ AA+Y Sbjct 62 EGELSRMRATLVREQTLAILARKFGLGEYMKLGAGELKSGGYRRESILSDCVEAIIAAIY 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G D + L+ +D+L+ +K G +KD KT LQE Q R P Y +++++G Sbjct 122 LDAGMDKAIAQ---VHLWYQDLLAEMKPGDAQKDPKTRLQEFLQGRKLPLPTYEVLNIKG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELI 214 H + F V KI+ E +G G S+++AEQ AAE+++ Sbjct 179 EAHNQTFKVTCKIEMLEEIFIGIGTSRRKAEQNAAEQVL 217 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella oneidensis MR-1] Sequence ID: Q8EH81.1 Length: 226 Range 1: 4 to 224 Score:135 bits(340), Expect:2e-38, Method:Compositional matrix adjust., Identities:83/225(37%), Positives:131/225(58%), Gaps:12/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY FK+ LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLGYEFKNLDLLTQALTHRSAANK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + L+AQ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVRGDTLTLIAQAFKLGDYLFLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS D R+L + E L+ I+ G +KD KT+LQE Q K P+Y++I+ Sbjct 123 AIYLDS--DLEVCRQLLLNWYAER-LAEIQPGINQKDAKTLLQEYLQGLKKPLPDYQVIN 179 Query 175 VEGPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLL 217 +EG H + F VE +I + +G S+++AEQ AA ++++LL Sbjct 180 IEGDAHDQTFTVECRIDDLSQSVIGVASSRRKAEQIAAAQVLELL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Histophilus somni 2336] Sequence ID: B0USS1.1 Length: 223 Range 1: 3 to 220 Score:135 bits(339), Expect:3e-38, Method:Compositional matrix adjust., Identities:83/222(37%), Positives:135/222(60%), Gaps:12/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L+KKLG+ F + L++ALTH S + + E LEFLGD+++NF I L + P Sbjct 3 LEKLQKKLGHQFTNLDYLKQALTHRSAAAFNN-ERLEFLGDSILNFAIGKALYEKFPKSN 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ E+ ++A+++EL ++++ G++ E+I+ D EAL AA+Y Sbjct 62 EGELSRMRATLVKEQTLAVVARQVELGDYLKLGAGELKSGGFRRESILSDCVEALIAAIY 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G D R Y+ ++E +L IK G +KD KT LQE Q + PEY +I ++G Sbjct 122 LDAGIDVALAR--VYQWYQE-LLEQIKPGEAQKDPKTRLQEFLQGHRLKLPEYEVIEIKG 178 Query 178 PHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLL 217 H + F V K++ + G+G S+++AEQ AA++ I+ L Sbjct 179 DAHNQSFRVSCKVETLTDVVFGQGTSRRKAEQHAAQQAIEKL 220 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella baltica OS185] Sequence ID: A6WKQ7.1 Length: 226 Range 1: 4 to 224 Score:135 bits(339), Expect:3e-38, Method:Compositional matrix adjust., Identities:84/225(37%), Positives:133/225(59%), Gaps:12/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY FK+ LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLGYEFKNIELLTQALTHRSAANK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + ++AQ+ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVRGDTLTIIAQEFKLGDYLYLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVY+DS D R L K + E L+ I+ G +KD KT+LQE Q K P+Y++I+ Sbjct 123 AVYLDS--DLEVCRALLLKWYAER-LAEIQPGISQKDAKTLLQEHLQGFKKPLPDYQVIN 179 Query 175 VEGPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLL 217 +EG H + F VE +I++ +G S+++AEQ AA ++++LL Sbjct 180 IEGDAHDQTFTVECRIEDLSQSVIGVASSRRKAEQIAAAQVLELL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Helicobacter hepaticus ATCC 51449] Sequence ID: Q7VIA9.1 Length: 240 Range 1: 13 to 221 Score:135 bits(339), Expect:5e-38, Method:Compositional matrix adjust., Identities:85/213(40%), Positives:128/213(60%), Gaps:12/213(5%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 LEKKLGY F+++ LL +ALTH S K+ + E LEFLGDA+++ + + L + P +EG Sbjct 13 LEKKLGYVFQNQQLLLEALTHKSCKKQYNNERLEFLGDAVLDLLVGEYLFKKFPLAKEGE 72 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDS 120 LS L+A +++E+ F LAQ L+L ++ I + G+ +I+ + FEAL A+Y++S Sbjct 73 LSKLRACIVNEKGFMKLAQSLDLGAYLYISQSEENNNGRQKASILSNAFEALIGAIYLES 132 Query 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 + + + Y L + + + I + DYKT LQEITQ + E P Y LIS GP H Sbjct 133 --SLTYVQSIIYDLLEYNYIK-IDLDSLFMDYKTALQEITQAFYGEIPTYTLISESGPDH 189 Query 181 KKKFIVEAKI--KEYRTLGEGKSKKEAEQRAAE 211 KK F + + KEY G SKKEA+Q++A+ Sbjct 190 KKSFEIALSVQGKEYAR-ASGNSKKEAQQKSAQ 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Haemophilus influenzae Rd KW20] Sequence ID: P44441.1 Length: 227 Range 1: 1 to 225 Score:134 bits(337), Expect:6e-38, Method:Compositional matrix adjust., Identities:82/229(36%), Positives:137/229(59%), Gaps:15/229(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L++LE+K+GY F D +LL++ALTH S + +H E LEFLGD+++NF I + L P Sbjct 1 MNHLDRLERKIGYRFNDIALLKQALTHRS-AATQHNERLEFLGDSILNFTIAEALYHQFP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ E +LA++ EL ++ + G++ E+I+ D EA+ Sbjct 60 RCNEGELSRMRATLVREPTLAILARQFELGDYMSLGSGELKNGGFRRESILADCVEAIIG 119 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+ +D G T ++ +++ +L+ IK G +KD KT LQE Q + P Y +++ Sbjct 120 AMSLDQG--LAVTTQVIRNWYQQ-LLAEIKPGDNQKDAKTRLQEYLQGKHLPLPTYEVVN 176 Query 175 VEGPHHKKKFIVEAKIKEY----RT-LGEGKSKKEAEQRAAEELIKLLE 218 ++G H + F V+ K+K RT + +G S+++AEQ AAE+++K L+ Sbjct 177 IQGEAHCQIFTVKCKVKSAEKIDRTFVAKGSSRRKAEQAAAEQILKELD 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Dechloromonas aromatica RCB] Sequence ID: Q47EF7.1 Length: 222 Range 1: 4 to 218 Score:134 bits(336), Expect:8e-38, Method:Compositional matrix adjust., Identities:82/219(37%), Positives:128/219(58%), Gaps:12/219(5%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 + + KKL + F D++L ALTH S+ + E LEFLGD +++F I L P+ E Sbjct 4 QSVAKKLNHCFSDQALFRTALTHRSFGTPNN-ERLEFLGDGVLDFVIAASLYHRFPDLPE 62 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYI 118 G LS L+A L+ +E + LA +L + F+R+ G++ +I+ D EAL+ A+Y+ Sbjct 63 GDLSRLRANLVRQETLHRLALELNIGAFLRLGEGELKSGGAQRPSILADALEALFGAIYL 122 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 D+G +A +R + KLF +L +K G+ +KD KT LQE Q R K P Y L+ G Sbjct 123 DAGFEA--SRAVIEKLFAP-LLDDLKPGQFQKDAKTRLQEWLQGRKKALPRYHLLEATGA 179 Query 179 HHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIK 215 H+++F + +I+ RT+G G S++ AEQ AAE+ +K Sbjct 180 AHEQRFEIACEIESPALRTVGHGSSRRIAEQVAAEKALK 218 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Natranaerobius thermophilus JW/NM-WN-LF] Sequence ID: B2A2N1.1 Length: 230 Range 1: 10 to 221 Score:134 bits(336), Expect:9e-38, Method:Compositional matrix adjust., Identities:87/217(40%), Positives:128/217(58%), Gaps:17/217(7%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQYSP 60 +L++KLG DK LL+ A+TH SY+ + +H E LEFLGDA++ I + L + P Sbjct 10 ELKEKLGIYVDDKLLLQ-AVTHTSYAHEQKDVVDHNERLEFLGDAVLELAISETLYKKYP 68 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWA 114 EG L+ L+A L+ E +A+KL+L K++R+ + G+ + + D EAL Sbjct 69 ELPEGELTKLRAELVCELSLVKIAEKLDLGKYLRLGKGEDSTGGRDRRSTLADTVEALIG 128 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVY+ + D T++L LFK D LS I R+ DYKT++QE+ Q R+ + P+Y+++ Sbjct 129 AVYLQTNYDQ--TKQLILDLFK-DQLSHIDNQRI-GDYKTMIQELVQDRYGDPPKYQIVK 184 Query 175 VEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAA 210 GP H K F+ E +I E G GKSKKEAEQ AA Sbjct 185 ESGPDHDKSFVAEVQINNEVVGRGSGKSKKEAEQNAA 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Glaesserella parasuis SH0165] Sequence ID: B8F3C7.1 Length: 223 Range 1: 3 to 220 Score:133 bits(335), Expect:1e-37, Method:Compositional matrix adjust., Identities:82/222(37%), Positives:133/222(59%), Gaps:12/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L+KKLGY F + L +ALTH S + K + E LEFLGD+++NF I L + P Sbjct 3 LERLQKKLGYQFANLDYLTQALTHRSAASKNN-ERLEFLGDSILNFAIGKALYEKFPKAN 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ E+ ++A++ EL +++++ G++ E+I+ D EA+ AAVY Sbjct 62 EGELSRMRAALVKEQTLAVVARQFELGEYMKLGAGELKSGGYRRESILSDCVEAIIAAVY 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G D R + + +L+ ++ G +KD KT LQE Q R P Y +I ++G Sbjct 122 LDAGIDRAMER---VHCWYQQLLNDMQLGEAQKDPKTRLQEYLQGRKLPLPTYEVIDIKG 178 Query 178 PHHKKKFIVEAKIKEYRT--LGEGKSKKEAEQRAAEELIKLL 217 H + F V K+++ +G G S+++AEQ AA ++IK+L Sbjct 179 EAHNQTFKVSCKVEKVDEIFIGNGTSRRKAEQDAALQVIKVL 220 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bdellovibrio bacteriovorus HD100] Sequence ID: Q6MLR5.1 Length: 234 Range 1: 9 to 228 Score:133 bits(334), Expect:2e-37, Method:Compositional matrix adjust., Identities:82/224(37%), Positives:136/224(60%), Gaps:18/224(8%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQYSPN 61 LE+++G+ FK+ +LLE+ALTH S++ + EH E LEFLGDA+++ + + L + P Sbjct 9 LEERVGHQFKNPALLERALTHKSFANELRNTVEHNEKLEFLGDAVLDLVVGEFLYEKFPT 68 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAA 115 EG LS +A +++EE + LA ++ L+K +++ +G+ +I FEA+ A Sbjct 69 DTEGGLSKKRASIVNEEVLSELALEMGLNKLMQLGKGEALTGGAQKPRLIASSFEAIVGA 128 Query 116 VYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 +Y+D G + +F R+ F L D + ++ ++DYKT LQE+ QK KE P Y ++ Sbjct 129 LYLDGGFEVARSFIRQEFVPL--ADRVCGHED--FERDYKTRLQELVQKSSKETPRYEVL 184 Query 174 SVEGPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKL 216 + EGP H ++F+V K+KE G G+SKK AEQ AA+ +++ Sbjct 185 AEEGPPHDREFLVCVKVKEDVWAQGRGRSKKNAEQMAAKNALEM 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella baltica OS155] Sequence ID: A3D1V6.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella baltica OS195] Sequence ID: A9L5N6.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella baltica OS223] Sequence ID: B8EBQ2.1 Length: 226 Range 1: 4 to 224 Score:132 bits(332), Expect:3e-37, Method:Compositional matrix adjust., Identities:83/225(37%), Positives:132/225(58%), Gaps:12/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + L Y FK+ LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLSYEFKNIELLTQALTHRSAANK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + ++AQ+ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVRGDTLTIIAQEFKLGDYLYLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVY+DS D R L K + E L+ I+ G +KD KT+LQE Q K P+Y++I+ Sbjct 123 AVYLDS--DLEVCRALLLKWYAER-LAEIQPGISQKDAKTLLQEHLQGFKKPLPDYQVIN 179 Query 175 VEGPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLL 217 +EG H + F VE +I++ +G S+++AEQ AA ++++LL Sbjct 180 IEGDAHDQTFTVECRIEDLSQSVIGVASSRRKAEQIAAAQVLELL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [[Haemophilus] ducreyi 35000HP] Sequence ID: Q7VL75.1 Length: 222 Range 1: 3 to 217 Score:132 bits(332), Expect:3e-37, Method:Compositional matrix adjust., Identities:79/219(36%), Positives:133/219(60%), Gaps:12/219(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +E+L+KK+GY F + L +ALTH S + K + E LEFLGD+++N+ I L + P Sbjct 3 IERLQKKIGYQFANLDYLLQALTHRSAAAKNN-ERLEFLGDSILNYAIGQALFERFPQAN 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ E+ +LA++ +L +++++ G++ E+I+ D EA+ AA+Y Sbjct 62 EGELSRMRATLVREQTLAILARQFDLGEYMKLGAGELKSGGYRRESILSDCVEAIIAAIY 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G D E Y + + +L +K G +KD KT LQE Q R + PEY ++ ++G Sbjct 122 LDAGMDK--ASERIYAWY-QTLLDEMKPGDAQKDPKTRLQEFLQGRRLKLPEYEVLDIKG 178 Query 178 PHHKKKFIVEAKIKEYRT--LGEGKSKKEAEQRAAEELI 214 H + F V KI+ + +G G S+++AEQ AAE+++ Sbjct 179 EAHNQIFKVSCKIETFTDIFIGIGTSRRKAEQNAAEQIL 217 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Azotobacter vinelandii DJ] Sequence ID: C1DQS2.1 Length: 229 Range 1: 5 to 212 Score:132 bits(332), Expect:4e-37, Method:Compositional matrix adjust., Identities:79/212(37%), Positives:123/212(58%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE+KLG+TFK++ L+ ALTH S++ + + E LEFLGDA++NF + L + P + Sbjct 5 LNRLERKLGHTFKNQDLMLLALTHRSFASRNN-ERLEFLGDAILNFVAGEALFERFPQAK 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LLA+ +L +R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLALLARGFDLGDHLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G + R L + + D L+ + KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDAGLNTVRERVLGWLAGELDSLTLVD---TNKDPKTRLQEFLQSRACELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE ++ +T G+G S++ AEQ Sbjct 181 EPHCRTFFVECRVALLNDKTYGQGASRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pasteurella multocida subsp. multocida str. Pm70] Sequence ID: P57805.1 Length: 225 Range 1: 5 to 223 Score:132 bits(332), Expect:4e-37, Method:Compositional matrix adjust., Identities:83/223(37%), Positives:131/223(58%), Gaps:12/223(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L++++GY F +LL++ALTH S + K H E LEFLGDA++NF I + L P Sbjct 5 LERLQRQIGYQFNQPALLKQALTHRSAAVK-HNERLEFLGDAILNFIIAEALYHQFPKCN 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ E LA++ EL ++ + G++ E+I+ D EA+ A+ Sbjct 64 EGELSRMRATLVREPTLASLARQFELGDYLSLGPGELKSGGFRRESILADCVEAIIGAIS 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D T ++ ++ L I+ G +KD KT LQE Q + P Y ++ ++G Sbjct 124 LDS--DLATTTKIVQHWYQAQ-LKQIQPGDNQKDPKTRLQEYLQGKRLPLPTYNVVEIKG 180 Query 178 PHHKKKFIVEAKIKEY-RT-LGEGKSKKEAEQRAAEELIKLLE 218 H + F VE +K RT +G G S+++AEQ AAE++++LLE Sbjct 181 EAHCQTFTVECYVKNIDRTFMGSGASRRKAEQAAAEKILQLLE 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella sp. ANA-3] Sequence ID: A0KZN2.1 Length: 226 Range 1: 4 to 224 Score:132 bits(331), Expect:4e-37, Method:Compositional matrix adjust., Identities:82/225(36%), Positives:131/225(58%), Gaps:12/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY FK+ LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLGYEFKNIDLLTQALTHRSAANK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + L+A+ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVRGDTLTLIAKAFKLGDYLFLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS D R+L + E L+ I+ G +KD KT+LQE Q K P+Y++I+ Sbjct 123 AIYLDS--DLEVCRKLLLHWYAER-LAEIQPGVNQKDAKTLLQEYLQGLKKPLPDYQVIN 179 Query 175 VEGPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLL 217 +EG H + F VE +I + +G S+++AEQ AA ++++LL Sbjct 180 IEGDAHDQTFTVECRIDDLSESVIGVASSRRKAEQIAAAQVLELL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia felis URRWXCal2] Sequence ID: Q4UKA8.1 Length: 225 Range 1: 1 to 221 Score:132 bits(331), Expect:4e-37, Method:Compositional matrix adjust., Identities:87/226(38%), Positives:124/226(54%), Gaps:17/226(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M E+LEK LGY+FK+K LL +AL+H S Y + YE LEFLGDA++N + ++ Sbjct 1 MVAFEKLEKLLGYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVVTEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + N EG L+ +++YL+ +E ++ KL L +I + G+ N I + Sbjct 61 LFKNFANYNEGNLAKIRSYLVCKETICVVGTKLTLKDYIIMTHGEEVAGGRDNPNNIENA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + TR + KL+ E I + D KT LQE Q P Sbjct 121 TEALIAAIYLDSNIET--TRNIIGKLWAEFIKI---QNLTDYDPKTALQEWAQASSHHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 YRLI EG H F V K+K+Y+ +G G S KEAE+ AA +L+ Sbjct 176 IYRLIKREGAAHSSTFTVLVKVKDYKQIGTGHSIKEAEKNAARKLL 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella sp. W3-18-1] Sequence ID: A1RMC7.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella putrefaciens CN-32] Sequence ID: A4Y4K4.1 Length: 226 Range 1: 4 to 224 Score:132 bits(331), Expect:5e-37, Method:Compositional matrix adjust., Identities:81/225(36%), Positives:131/225(58%), Gaps:12/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY F LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLGYEFTQIELLTQALTHRSAANK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + ++AQ+ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVRGDTLTIIAQEFKLGDYLYLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS D R+L + E L+ I+ G +KD KT+LQE Q K P+Y++I+ Sbjct 123 AIYLDS--DLEVCRKLLLTWYAER-LAEIQPGVSQKDAKTLLQEYLQGLKKPLPDYQVIN 179 Query 175 VEGPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLL 217 +EG H + F VE +I++ +G S+++AEQ AA ++++LL Sbjct 180 IEGDAHDQTFTVECRIEDLSQSVIGVASSRRKAEQIAAAQVLELL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella sp. MR-7] Sequence ID: Q0HSJ1.1 Length: 226 Range 1: 4 to 224 Score:132 bits(331), Expect:5e-37, Method:Compositional matrix adjust., Identities:82/225(36%), Positives:131/225(58%), Gaps:12/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY FK+ LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLGYEFKNLELLTQALTHRSAANK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + L+A+ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVRGDTLTLIAKAFKLGDYLFLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS D R+L + E L+ I+ G +KD KT+LQE Q K P+Y++I+ Sbjct 123 AIYLDS--DLEVCRKLLLHWYAER-LAEIQPGVNQKDAKTLLQEYLQGLKKPLPDYQVIN 179 Query 175 VEGPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLL 217 +EG H + F VE +I + +G S+++AEQ AA ++++LL Sbjct 180 IEGDAHDQTFTVECRIDDLSESVIGVASSRRKAEQIAAAQVLELL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Actinobacillus pleuropneumoniae serovar 5b str. L20] Sequence ID: A3MZQ9.1 Length: 223 Range 1: 3 to 217 Score:131 bits(330), Expect:6e-37, Method:Compositional matrix adjust., Identities:82/219(37%), Positives:130/219(59%), Gaps:12/219(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L+KKL Y F + L +ALTH S K + E LEFLGD+++NF I L + P Sbjct 3 LERLQKKLSYQFTNLDYLLQALTHRSAGAKNN-ERLEFLGDSILNFAIGKALFEKFPKAN 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ E+ +LA++ L +++R+ G++ E+I+ D EA+ AA+Y Sbjct 62 EGELSRMRATLVREQTLAILARQFGLGEYMRLGAGELKSGGYRRESILSDCVEAIIAAIY 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G D + L+ +D+L+ +K G +KD KT LQE Q R P Y ++ ++G Sbjct 122 LDAGMDKAIEQ---VHLWYQDLLAEMKPGDAQKDPKTRLQEFLQGRKLPLPTYEVLDIKG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELI 214 H + F V KI+ E +G G S+++AEQ AAE+++ Sbjct 179 EAHNQTFKVTCKIEMLEEIFIGIGTSRRKAEQNAAEQVL 217 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Campylobacter fetus subsp. fetus 82-40] Sequence ID: A0RRM7.1 Length: 223 Range 1: 1 to 214 Score:131 bits(330), Expect:6e-37, Method:Compositional matrix adjust., Identities:84/219(38%), Positives:126/219(57%), Gaps:14/219(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L +LE+ LGY FK+K+LL++ALTH S + E LEFLGDA+++ + + L Sbjct 1 MDKLNRLEEHLGYKFKNKTLLKEALTHKSMKSSVNNERLEFLGDAVLDLIVGEYLFFKFK 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 + EG LS L+A L++E+ F ++ ++ L F+ + G+ +++ D EAL Sbjct 61 DTDEGNLSKLRAALVNEKSFASISSQIRLGDFLYLSAAEDNNNGRNKPSLVSDALEALMG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y++SG +A +++F L E + I + KDYKT LQEITQ R+ P Y L+S Sbjct 121 AIYLESGLEA--VKKIFINLL-ESQYNNIDLQSLGKDYKTTLQEITQARFGVTPRYELVS 177 Query 175 VEGPHHKKKFIVEAKIKE---YRTLGEGKSKKEAEQRAA 210 GP HKK F + + + R + G SKKEAEQ AA Sbjct 178 SSGPDHKKSFEMAVFLNDKELARAI--GNSKKEAEQSAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella sp. MR-4] Sequence ID: Q0HG98.1 Length: 226 Range 1: 4 to 224 Score:131 bits(330), Expect:6e-37, Method:Compositional matrix adjust., Identities:82/225(36%), Positives:131/225(58%), Gaps:12/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY FK+ LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLGYEFKNIELLTQALTHRSAANK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + L+A+ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVRGDTLTLIAKAFKLGDYLFLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS D R+L + E L+ I+ G +KD KT+LQE Q K P+Y++I+ Sbjct 123 AIYLDS--DLEVCRKLLLHWYAER-LAEIQPGVNQKDAKTLLQEYLQGLKKPLPDYQVIN 179 Query 175 VEGPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLL 217 +EG H + F VE +I + +G S+++AEQ AA ++++LL Sbjct 180 IEGDAHDQTFTVECRIDDLSESVIGVASSRRKAEQIAAAQVLELL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Magnetococcus marinus MC-1] Sequence ID: A0L633.1 Length: 246 Range 1: 10 to 241 Score:132 bits(332), Expect:7e-37, Method:Compositional matrix adjust., Identities:85/235(36%), Positives:131/235(55%), Gaps:20/235(8%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYS----------KKEHYETLEFLGDALVNFFIVD 53 LE+LE+ L Y F LL+ ALTH S H E LEFLGD+++N + Sbjct 10 LERLEQALDYRFTQSDLLQLALTHRSAPLDGSKAGEVVATTHNERLEFLGDSVLNLIVSH 69 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGD 107 L + EG LS +A L++ + +A+ LEL +++R+ RG+ +I+G+ Sbjct 70 RLYKRFGEVPEGQLSQWRAMLVNTRSLSEVAKDLELGRYLRMGRGEAKSGGREKYSILGN 129 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKER 167 EAL A+Y+D G +A + +LF + + I+ + KDYKT+LQE Q R + Sbjct 130 ALEALLGAIYLDGGFEA--AERVVDRLFAHQV-AGIEPEQQGKDYKTLLQEYLQARGEAL 186 Query 168 PEYRLISVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIKLLEESE 221 P Y ++S EGP H++ F+V +E G+G+SK+EAEQ AA++ ++LL ESE Sbjct 187 PIYAVLSAEGPPHERVFVVSCHPREQLCGHGQGRSKREAEQHAAQQALELLIESE 241 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas protegens Pf-5] Sequence ID: Q4KHT1.2 Length: 229 Range 1: 5 to 212 Score:131 bits(329), Expect:1e-36, Method:Compositional matrix adjust., Identities:77/212(36%), Positives:125/212(58%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE++LGY+FKD+ L+ ALTH S++ + + E LEFLGDA++NF + L + P R Sbjct 5 LSRLERQLGYSFKDQELMLLALTHRSFAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E +LA+ +L +++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G + R L + + + L+ + KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDAGMETARDRVLSWLASEFESLTLVD---TNKDPKTRLQEFLQSRACELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE ++ ++ G+G S++ AEQ Sbjct 181 EPHCRTFFVECEVTLLNEKSRGQGVSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella frigidimarina NCIMB 400] Sequence ID: Q07YZ6.1 Length: 226 Range 1: 4 to 224 Score:130 bits(328), Expect:1e-36, Method:Compositional matrix adjust., Identities:84/225(37%), Positives:132/225(58%), Gaps:12/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY F + LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLCRTLGYEFNNIELLIQALTHRSAANK-HNERLEFLGDSILSIAISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + ++A++ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVKGDTLTIIAKEFKLGDYLYLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVY+D+ D R+L ++E L+ IK G +KD KTILQE Q K P+Y++++ Sbjct 123 AVYLDA--DIEVCRKLLLSWYQER-LAEIKPGINQKDPKTILQEYLQGFKKPLPDYQVVA 179 Query 175 VEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLL 217 VEG H + F VE KI E + G S+++AEQ AA ++++LL Sbjct 180 VEGEAHDQTFTVECKISELDKVVTGVASSRRKAEQLAAAQVLELL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas fluorescens SBW25] Sequence ID: C3K6Y7.1 Length: 229 Range 1: 5 to 212 Score:130 bits(328), Expect:2e-36, Method:Compositional matrix adjust., Identities:79/212(37%), Positives:124/212(58%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE++LGYTFKD+ L+ ALTH S++ + + E LEFLGDA++NF + L + P R Sbjct 5 LARLERQLGYTFKDQELMVLALTHRSFAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E +LA+ L +++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G +A R + + + L+ + KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDAGMEAAKERVTAWLTSEIESLTLVD---TNKDPKTRLQEFLQSRGCELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE +I ++ G+G S++ AEQ Sbjct 181 EPHCRVFFVECEITLLNEKSRGQGVSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Alkalilimnicola ehrlichii MLHE-1] Sequence ID: Q0A8Z1.1 Length: 228 Range 1: 6 to 224 Score:130 bits(327), Expect:2e-36, Method:Compositional matrix adjust., Identities:77/223(35%), Positives:130/223(58%), Gaps:12/223(5%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 + L+ +LGY F+ LL++ALTH S + ++ E LEFLGD ++NF I D L P+ E Sbjct 6 DALQDRLGYRFRRPELLDEALTHRSVTGPDN-ERLEFLGDGILNFVIADELYHRRPDATE 64 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYI 118 G LS L+A L++ + + L++ +R+ G++ ++I+ D EAL+ A+Y+ Sbjct 65 GVLSRLRATLVNGRTLAEIGKGLDVGTALRLGGGEMKSGGQRRKSILADAVEALFGAIYL 124 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 D G D +RE +L+++ + S E + KD KT LQE Q + P Y ++ V G Sbjct 125 DGGFDP--SRETILRLYRDRLASLPTEAEL-KDPKTRLQEHLQAGRRPLPRYEVLEVSGQ 181 Query 179 HHKKKFIVEAKIKEYRTLGEGK--SKKEAEQRAAEELIKLLEE 219 H + F V ++++ EG+ S+++AEQ+AAE+++K LE+ Sbjct 182 SHDQTFRVACRLQDAAVTAEGEAGSRRKAEQQAAEQMLKRLED 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella denitrificans OS217] Sequence ID: Q12KI1.1 Length: 226 Range 1: 4 to 224 Score:130 bits(327), Expect:2e-36, Method:Compositional matrix adjust., Identities:84/226(37%), Positives:133/226(58%), Gaps:14/226(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY F ++ LL +ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 VKNLARLSRTLGYEFTNQELLVQALTHRSAANK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ E L+A++ +L ++ + G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVKGETLTLIAKEFKLGDYLFLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTREL-FYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 AVY+D+ A T L +YK+ L IK G +KD KTILQE Q K P+Y+++ Sbjct 123 AVYLDANMQACETLLLSWYKVR----LDEIKPGINQKDPKTILQEYLQGYKKPLPDYQVV 178 Query 174 SVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLL 217 V+G H + F VE +I++ + G G S+++AEQ AA ++++L+ Sbjct 179 QVDGEAHDQTFTVECRIQDLDEVVTGVGSSRRKAEQLAAAQILELI 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia akari str. Hartford] Sequence ID: A8GM79.1 Length: 227 Range 1: 1 to 226 Score:130 bits(326), Expect:3e-36, Method:Compositional matrix adjust., Identities:86/231(37%), Positives:126/231(54%), Gaps:17/231(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M+ E LEK LGY+FK++ LL +AL+H S Y + YE LEFLGDA++N + ++ Sbjct 1 MQSFETLEKLLGYSFKNQELLIEALSHPSLRQHHEYKYDKDYERLEFLGDAVLNLVVTEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + + EG L+ +++YL+ +E ++ KL L +I + G+ N I + Sbjct 61 LFRNFASYNEGNLAKIRSYLVCKETICVVGTKLTLKDYIIMTYGEEVAGGRDNPNNIENA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + TR + KL++E I + D KT LQE Q P Sbjct 121 MEALIAAIYLDSNIET--TRNIIGKLWEEFIKI---QNLTDYDPKTALQEWAQASSHHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 YRLI EG H F V K+K+Y G G S KEAE+ AA +L+ L++ Sbjct 176 IYRLIKREGAAHSSTFTVLVKVKDYEQTGTGHSIKEAEKNAARDLLHRLQD 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Methylococcus capsulatus str. Bath] Sequence ID: Q608M7.1 Length: 230 Range 1: 6 to 224 Score:130 bits(326), Expect:3e-36, Method:Compositional matrix adjust., Identities:87/223(39%), Positives:125/223(56%), Gaps:12/223(5%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 E L +KLG F+D LL ALTH S ++ + E LEFLGD+++ F + + L Q P+ E Sbjct 6 EHLARKLGIPFRDPGLLRNALTHRS-AEGVNNERLEFLGDSVLGFVVTEYLYQRFPSADE 64 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYI 118 G LS L+A L++E +A++LEL +++ + G++ ++I+ D EA+ AV Sbjct 65 GVLSRLRATLVNETSLARIARELELGEYLILGSGELKSGGYRRDSILSDALEAILGAVLR 124 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 D G DA R L LF E LSA+ KKD KT LQE+ Q R P Y LI G Sbjct 125 DQGIDA--CRALILTLF-ERPLSALSLDDWKKDPKTRLQELMQGRGLPLPVYTLIDQSGL 181 Query 179 HHKKKFIV--EAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 H + F V E + +GEG S+K+AEQ+AAE ++ L + Sbjct 182 PHDQHFRVRCEVPLAVEPCVGEGSSRKKAEQQAAENMLSRLSD 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Thermotoga neapolitana DSM 4359] Sequence ID: B9K9K8.1 Length: 240 Range 1: 7 to 228 Score:130 bits(326), Expect:4e-36, Method:Compositional matrix adjust., Identities:83/225(37%), Positives:131/225(58%), Gaps:19/225(8%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK---------EHYETLEFLGDALVNFFIV 52 + +E+L+K+LG F D+ LL +AL H SY+ + E E LEFLGDA++ F+ Sbjct 7 RTVEELQKRLGVLFNDEELLFRALCHSSYANEQKQAGREDVESNEKLEFLGDAVLELFVC 66 Query 53 DLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIG 106 ++L + P G L+ +K+ + SEE ++++LEL K++ + + G+ ++I+ Sbjct 67 EILYRKYPEAEVGDLARVKSAVASEEVLARVSRRLELGKYLFLGKGEEKTGGRERDSILA 126 Query 107 DVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKE 166 D FEAL AA+Y+D G ++LF F E + I +G + DYKT LQEI Q+ K Sbjct 127 DAFEALLAALYLDQGYQK--IKDLFEDEF-ESYIEKIMKGEILFDYKTALQEIVQREHKT 183 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAA 210 PEY L+ E +K F+VE ++ E +G G++KKEAE+ AA Sbjct 184 PPEYVLVRTEKNGSEKLFVVEVRVNDETLAVGRGRTKKEAEKDAA 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas fluorescens Pf0-1] Sequence ID: Q3KHL9.1 Length: 229 Range 1: 5 to 212 Score:129 bits(324), Expect:5e-36, Method:Compositional matrix adjust., Identities:78/212(37%), Positives:123/212(58%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE++LGYTFKD+ L+ ALTH S++ + + E LEFLGDA++NF + L P R Sbjct 5 LSRLERQLGYTFKDQELMVLALTHRSFAGRNN-ERLEFLGDAILNFVAGEALFDRFPLAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E +LA+ +L ++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G + R L + + + L+ + KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDAGMEVARERVLAWLAGEFEGLTLVD---TNKDPKTRLQEFLQSRGCELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE ++ ++ G+G S++ AEQ Sbjct 181 EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas putida GB-1] Sequence ID: B0KV27.1 Length: 229 Range 1: 5 to 222 Score:129 bits(324), Expect:6e-36, Method:Compositional matrix adjust., Identities:83/222(37%), Positives:127/222(57%), Gaps:13/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE+KLGYTFK++ + ALTH SY+ + + E LEFLGDA++NF + L + P R Sbjct 5 LARLERKLGYTFKNQDQMLLALTHRSYAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LA+ +L +++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+ D R L + + + L+ + KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDADMDTARERVLAWLADEFEGLTLVD---TNKDPKTRLQEFLQSRSCELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ-RAAEELIKL 216 H + F VE ++ ++ G+G S++ AEQ AA LI L Sbjct 181 EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIAL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Acinetobacter pittii PHEA-2] Sequence ID: F0KKL2.2 Length: 230 Range 1: 12 to 230 Score:128 bits(322), Expect:1e-35, Method:Compositional matrix adjust., Identities:81/221(37%), Positives:125/221(56%), Gaps:9/221(4%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +L ++GY FK LL+ ALTH S S K +YE LEFLGD+L+ I + L PN+ EG Sbjct 12 RLLSRIGYQFKQLELLQLALTHRSVSHKYNYERLEFLGDSLLGMIIANYLYHAYPNENEG 71 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 L+ ++A L+ +E +A L+L + + + G++ E+I+ D EA+ A+Y+D Sbjct 72 RLTRMRATLVRQEALGKIATDLQLSRCLILSTGELKSGGHHRESILADTVEAIIGAIYLD 131 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 SG D N +++ K + L I+ KD K+ LQE Q R K P Y ++ ++G Sbjct 132 SG-DLNLLKDIVLKWYIP-YLDHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDA 189 Query 180 HKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLEE 219 + F VE + + GEG S++ AEQ AA E++KLLE+ Sbjct 190 PHQHFKVECVVDGLPKIYGEGSSRRFAEQAAAAEILKLLEQ 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bordetella pertussis Tohama I] Sequence ID: Q7VW39.1 Length: 256 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bordetella parapertussis 12822] Sequence ID: Q7W5J6.1 Length: 256 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bordetella bronchiseptica RB50] Sequence ID: Q7WD32.1 Length: 256 Range 1: 6 to 216 Score:129 bits(324), Expect:1e-35, Method:Compositional matrix adjust., Identities:75/215(35%), Positives:126/215(58%), Gaps:12/215(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L LE +L + F DK+LLE+ALTH S+ + H E LEFLGD+++NF + +L + Sbjct 6 LATLETRLDHRFGDKALLEQALTHRSHGAR-HNERLEFLGDSVLNFVVAAMLFERYGKLD 64 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS L+A L+ + +AQ+L+L +++R+ G++ +I+ D EAL+ AV+ Sbjct 65 EGDLSRLRANLVKQASLADIAQRLDLSQYLRLGEGELKSGGFRRPSILADTVEALFGAVF 124 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G +A R + + + + +++ + + KD KT+LQE Q R P+Y +++ G Sbjct 125 LDAGFEA--ARRVIVRQY-QPVMAHVDPKTLGKDAKTLLQEFLQGRKLALPQYTVVATHG 181 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAA 210 H ++F VE I E + + G S++ AEQ AA Sbjct 182 AAHSQQFEVECAIPALEIKIVAPGASRRAAEQSAA 216 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920] Sequence ID: A7MZA8.1 Length: 225 Range 1: 5 to 222 Score:128 bits(321), Expect:1e-35, Method:Compositional matrix adjust., Identities:79/222(36%), Positives:126/222(56%), Gaps:12/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +++LE+KLGY FKD L+ ALTH S + K H E LEFLGD++++F I D L P Sbjct 5 IDKLERKLGYQFKDAGLINLALTHRSANSK-HNERLEFLGDSILSFVIADDLYHRFPKVN 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ L ++ +L ++++ G++ ++I+ D EA+ A+Y Sbjct 64 EGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D R + + L AIK G +KD KT LQE Q R K P Y + +++G Sbjct 124 LDS--DIEAVRGIVLSWYNSR-LEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLL 217 H ++F VE + + +G+G S+++AEQ AAE ++ L Sbjct 181 EAHNQEFTVECDVAGVDKPVIGKGTSRRKAEQAAAETALEQL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Geobacter metallireducens GS-15] Sequence ID: Q39T82.1 Length: 246 Range 1: 18 to 237 Score:129 bits(323), Expect:1e-35, Method:Compositional matrix adjust., Identities:77/226(34%), Positives:120/226(53%), Gaps:23/226(10%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEH-------YETLEFLGDALVNFFIVDLLVQY 58 +LE +GY F ++ L +ALTH S+ + E LEFLGDA++ + +L Sbjct 18 ELEAGIGYRFVNRQFLAEALTHRSWVNERRGEEGIRDNERLEFLGDAVLGLLVGKMLFAR 77 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEAL 112 P REG L+ +KA L+ EE LA L + + + RG + +++ + +EAL Sbjct 78 FPQSREGVLARMKASLVGEETLAALASARGLGRHLLLGRGEERSGGRERRSLLANTYEAL 137 Query 113 WAAVYIDSGRDANFTRELFYKLFKED---ILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 AAVY+D G ++ ++D +L+ I G +D+KT QE+ Q R+ P Sbjct 138 LAAVYLDGGLGP------VERIVEQDFSPLLAGIASGATGRDFKTEFQEMVQTRFGTAPT 191 Query 170 YRLISVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELI 214 Y LI+ +GP H ++F V A + R G G+SKKEAEQ AA +++ Sbjct 192 YELIATDGPPHDRRFTVIAMVAGKRMGEGAGRSKKEAEQAAARQVL 237 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Acinetobacter baylyi ADP1] Sequence ID: Q6F9C2.1 Length: 230 Range 1: 12 to 230 Score:128 bits(321), Expect:1e-35, Method:Compositional matrix adjust., Identities:80/221(36%), Positives:126/221(57%), Gaps:9/221(4%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +L+ ++GY FK LL+ ALTH S S K +YE LEFLGD+L+ I + L Q P++ EG Sbjct 12 RLQSRIGYEFKQLELLQLALTHRSVSHKYNYERLEFLGDSLLGMIIANYLYQAYPHENEG 71 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 L+ ++A L+ +E +A L+L + + + G++ E+I+ D EA+ A+Y+D Sbjct 72 RLTRMRATLVRQEALGKIANDLKLSRCLILSTGELKSGGHHRESILADTVEAIIGAIYVD 131 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 S D N + + K + L I+ KD K+ LQE Q R K P Y ++ ++G Sbjct 132 SN-DLNLLKNIVLKWYIP-YLDHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDA 189 Query 180 HKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLEE 219 + F V ++ R +GEG S++ AEQ AA E++KLLE+ Sbjct 190 PNQHFKVVCLVEGLPRVMGEGSSRRFAEQTAAAEILKLLEQ 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [[Mannheimia] succiniciproducens MBEL55E] Sequence ID: Q65VN5.1 Length: 224 Range 1: 1 to 222 Score:128 bits(321), Expect:1e-35, Method:Compositional matrix adjust., Identities:82/228(36%), Positives:129/228(56%), Gaps:16/228(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L++L++++ Y FKD +LL++ALTH S + K H E LEFLGDA++N+ I D L P Sbjct 1 MNHLDRLQRQISYEFKDITLLKQALTHRSAATK-HNERLEFLGDAILNYTIADALYHQFP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ E +LA++ +L +++ + G++ E+I+ D EA+ Sbjct 60 KCNEGELSRMRATLVREPTLAILARQFKLGEYMALGHGELKSGGFRRESILADCVEAIIG 119 Query 115 AVYIDSG--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+ +DS T + KL +E IK G +KD KT LQE Q P Y + Sbjct 120 AISLDSSLVSATQITLHWYEKLLRE-----IKPGENQKDPKTRLQEYLQGHRLALPTYDV 174 Query 173 ISVEGPHHKKKFIVEAKIKEY-RT-LGEGKSKKEAEQRAAEELIKLLE 218 ++G H + F +E + RT +G G S+++AEQ AAE+++ LE Sbjct 175 KDIKGEAHCQTFTIECHVPNLDRTFIGVGSSRRKAEQAAAEQILTALE 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Oleidesulfovibrio alaskensis G20] Sequence ID: Q310Z1.1 Length: 229 Range 1: 1 to 225 Score:128 bits(321), Expect:1e-35, Method:Compositional matrix adjust., Identities:83/228(36%), Positives:127/228(55%), Gaps:15/228(6%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQ 57 M E+L+ L Y F D LLE ALTH SY+ + EH E LE+LGDA++ + + L Sbjct 1 MFEKLQDVLCYRFADVRLLETALTHSSYANERGTEIEHNERLEYLGDAVLELTVSEQLFT 60 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEA 111 P REG L+ ++A L+S+ LA++L+L ++ + +G + +++ D FEA Sbjct 61 RFPEAREGQLTRMRARLVSKPSLAELARELKLDTYLLLGKGEESQGGRTRSSVLSDAFEA 120 Query 112 LWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYR 171 + A+++D G A + +F + R K D K+ LQE+TQ+ +KERP Y Sbjct 121 ILGAIFLDGGYAA--AGKTVLHVFSSRWPQGAEAARTK-DAKSTLQELTQRLFKERPVYT 177 Query 172 LISVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLLE 218 L+ GP H+K F V + + R L EG+S K AEQ+AA ++LLE Sbjct 178 LLGSSGPEHEKIFKVRLLLPDGRALETEGQSVKRAEQKAAGLALELLE 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Vibrio parahaemolyticus RIMD 2210633] Sequence ID: Q87LN9.1 Length: 225 Range 1: 5 to 222 Score:127 bits(320), Expect:2e-35, Method:Compositional matrix adjust., Identities:79/222(36%), Positives:127/222(57%), Gaps:12/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +++LE+KLGY FKD L+ ALTH S + K H E LEFLGD++++F I D L P Sbjct 5 IDKLERKLGYQFKDAGLINLALTHRSANSK-HNERLEFLGDSILSFVIADDLYHRFPKVN 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ L ++ +L ++++ G++ ++I+ D EA+ A+Y Sbjct 64 EGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D R + + L AIK G +KD KT LQE Q R K P Y + +++G Sbjct 124 LDS--DIEKVRSIVLSWYNSR-LEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLL 217 H ++F VE ++ + +G+G S+++AEQ AAE ++ L Sbjct 181 EAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas putida F1] Sequence ID: A5W8F2.1 Length: 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas putida KT2440] Sequence ID: Q88MY5.1 Length: 229 Range 1: 5 to 222 Score:127 bits(320), Expect:2e-35, Method:Compositional matrix adjust., Identities:83/222(37%), Positives:125/222(56%), Gaps:13/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L LE+KLGYTFK++ + ALTH SY+ + + E LEFLGDA++NF + L + P R Sbjct 5 LAGLERKLGYTFKNQDQMLLALTHRSYAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LA+ +L ++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLARLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+ D R L + + + L+ + KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDADMDTARERILAWLADEFEGLTLVD---TNKDPKTRLQEFLQSRSCELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ-RAAEELIKL 216 H + F VE ++ ++ G+G S++ AEQ AA LI L Sbjct 181 EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIAL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bordetella petrii DSM 12804] Sequence ID: A9IIJ2.1 Length: 252 Range 1: 3 to 213 Score:128 bits(322), Expect:2e-35, Method:Compositional matrix adjust., Identities:74/215(34%), Positives:124/215(57%), Gaps:12/215(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L LE +L + F + +LLE+ALTH S+S + H E LEFLGD+++NF + +L + P Sbjct 3 LATLETRLDHRFGNAALLEQALTHRSHSAR-HNERLEFLGDSVLNFVVAAMLFERFPKLD 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS L+A L+ + + Q+LEL +++R+ G++ +I+ D EA++ A + Sbjct 62 EGDLSRLRANLVKQASLADIGQRLELSQYLRLGEGELKSGGFRRPSILADAVEAIFGAAF 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G D R++ + + + +L+++ + KD KT+LQE Q R P Y +++ G Sbjct 122 LDGGFDT--ARKVIVRQY-QPVLASVDPKTLGKDAKTLLQEFLQGRKLALPLYTVVATHG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAA 210 H ++F VE I E + + G S++ AEQ AA Sbjct 179 AAHSQQFEVECAIPALEIKVVAPGASRRAAEQSAA 213 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Desulfovibrio vulgaris str. 'Miyazaki F'] Sequence ID: B8DPB3.1 Length: 230 Range 1: 1 to 225 Score:127 bits(319), Expect:3e-35, Method:Compositional matrix adjust., Identities:80/230(35%), Positives:124/230(53%), Gaps:19/230(8%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQ 57 M E+L+ + Y F D LL A+TH S++ + EH E LEFLGDA++ + + L Sbjct 1 MFEKLQSDIHYAFNDAGLLATAMTHSSWANEQQEHVEHNERLEFLGDAVLELCVSEELFA 60 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEA 111 P REG L+ ++A L+S+ LA+ L+L ++R+ RG+ ++ +++ D EA Sbjct 61 RFPGAREGDLTRMRARLVSKPALAELARDLQLELYLRLGRGEESQGGRERSSLLSDALEA 120 Query 112 LWAAVYIDSG--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 + AV++D G R R + + D +G+ KDYK+ LQE+TQ ++ERP Sbjct 121 MLGAVFLDGGYERARAVVRHVLAARWPCD-----ADGKRSKDYKSRLQELTQSLFRERPV 175 Query 170 YRLISVEGPHHKKKFIVEAKIKEYRTLGE-GKSKKEAEQRAAEELIKLLE 218 Y L+ GP H+K+F V + + G S K AEQ AA +K LE Sbjct 176 YALMGSSGPEHEKRFEVRLTLPDGTVFTAIGPSVKRAEQMAAGLALKNLE 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudothermotoga lettingae TMO] Sequence ID: A8F397.1 Length: 238 Range 1: 7 to 235 Score:127 bits(319), Expect:4e-35, Method:Compositional matrix adjust., Identities:85/232(37%), Positives:133/232(57%), Gaps:19/232(8%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK---------EHYETLEFLGDALVNFFIV 52 K+L +K+GY F + LL AL H SY+ + E E LEFLGDA+++ + Sbjct 7 KILIDFMEKIGYRFYEPELLYNALCHSSYAHEQKQRGRKDVESNERLEFLGDAVIDLLLA 66 Query 53 DLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIG 106 + L P EG ++ +KA + SEE +A+ + L +++ + RG + ++++ Sbjct 67 EYLYLEFPEASEGVMAKVKAAIASEEALAQIARDINLGRYMFLGRGEEVSSGRERDSLLA 126 Query 107 DVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKE 166 D+ EA+ AAVYID G A +++F F + + EG++ DYKT LQEITQ R+++ Sbjct 127 DMLEAVVAAVYIDGGLTA--VKKVFLSYFAK-YAKEVVEGKIVFDYKTSLQEITQARYRK 183 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 PEY L++ +GP H KKF VE ++ + +GEG S KEAE+ AA I+ L Sbjct 184 LPEYVLVNEKGPSHMKKFTVELRLSGKLIAVGEGPSIKEAEKEAARRAIEKL 235 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Sequence ID: Q57LD0.2 Length: 226 Range 1: 5 to 224 Score:127 bits(318), Expect:4e-35, Method:Compositional matrix adjust., Identities:79/224(35%), Positives:126/224(56%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF + LL++ALTH S S K H E LEFLGD++++F I + L P Sbjct 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-HNERLEFLGDSILSFVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ LA++ +L + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKSGGFRRESILADTMEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS + +L +K L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--NIQTVEQLILNWYKTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+++K LE Sbjct 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQVLKKLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Helicobacter acinonychis str. Sheeba] Sequence ID: Q17XJ6.1 Length: 234 Range 1: 16 to 230 Score:127 bits(318), Expect:5e-35, Method:Compositional matrix adjust., Identities:85/221(38%), Positives:127/221(57%), Gaps:16/221(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 LEK LGY+FKDK LLE+ALTH S + E LEFLGDA++ I +LL EG Sbjct 16 LEKALGYSFKDKHLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGK 75 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWAAVYIDS 120 LS L+A ++S + F LA+ + L ++R+ +G+ +I+ FEAL A VY+++ Sbjct 76 LSKLRASIVSAQGFTKLARAISLQDYLRVSSSEETSKGREKPSILSSAFEALMAGVYLEA 135 Query 121 GRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 G D + L + +K L + DYKT LQE+TQ ++ P Y+L+ +GP Sbjct 136 GLDKVRKIMQNLLNRAYKRLDLE-----HLSVDYKTALQELTQAQFCVIPTYQLLKEKGP 190 Query 179 HHKKKF--IVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 H K+F ++ + + Y T +GKSKKEAEQ+ A + ++ L Sbjct 191 AHHKEFEMVLYIQNQMYAT-AKGKSKKEAEQQCAYQALQKL 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Phenylobacterium zucineum HLK1] Sequence ID: B4RCU4.1 Length: 238 Range 1: 8 to 225 Score:127 bits(318), Expect:5e-35, Method:Compositional matrix adjust., Identities:78/222(35%), Positives:120/222(54%), Gaps:15/222(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYS 59 + +LE+++GY F D+ LLE+ALTH S H E LEFLGD ++N + L+ Sbjct 8 VAELERRIGYVFTDRDLLERALTHASVGDGARAVRHNERLEFLGDRVLNLCAAERLMALD 67 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALW 113 P+ REG +S L A L++ A++ L + +R+ ++ ++GD EAL Sbjct 68 PDAREGEMSRLLASLVNYHACARAAKRAGLQEALRLSASATKVGARKSDAVLGDACEALI 127 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 AA+YID G + R F K + E+ + + E R K D KT LQE Q P Y ++ Sbjct 128 AALYIDGGLET--ARAFFLKFWDEE-FARLDEPRAK-DPKTQLQEWVQGMGLPLPTYEIV 183 Query 174 SVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 S EGP H F VE ++ + GEG+S++ AE+ AA+ ++ Sbjct 184 SQEGPPHAPSFTVEVQVAGFGAERGEGRSRQAAEKAAAQCML 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Nitrosococcus oceani ATCC 19707] Sequence ID: Q3J8D5.1 Length: 233 Range 1: 5 to 214 Score:126 bits(317), Expect:6e-35, Method:Compositional matrix adjust., Identities:81/213(38%), Positives:123/213(57%), Gaps:12/213(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L +KLGY F + +LL A+TH S + KE+ E LEFLGD+++NF I D L P + Sbjct 5 LERLCRKLGYRFAEPALLRHAITHRS-ATKENNERLEFLGDSILNFLIADFLYSGFPRAQ 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS L+A L+ E LA++LE+ + + G++ +I+ D FEA+ AVY Sbjct 64 EGELSRLRATLVKGETLAELARELEIGDHLILGLGELKSGGYRRTSILADAFEAVIGAVY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVK-KDYKTILQEITQKRWKERPEYRLISVE 176 +D G +A R+L L+++ + + E + KD KT LQE Q R P+YR+ +V Sbjct 124 LDGGLEA--CRKLVSSLYRDRLETLTNEALLNLKDPKTRLQEYLQARQFPLPDYRVSAVS 181 Query 177 GPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQ 207 G H + F VE + +G G+S+++AEQ Sbjct 182 GEAHDQVFQVECTLNNTFPSVIGIGRSRRKAEQ 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas putida W619] Sequence ID: B1J4E0.1 Length: 229 Range 1: 5 to 212 Score:126 bits(317), Expect:7e-35, Method:Compositional matrix adjust., Identities:79/212(37%), Positives:119/212(56%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE+KLGYTFKD+ + ALTH SY+ + + E LEFLGDA++NF + L + P R Sbjct 5 LARLERKLGYTFKDQDQMVLALTHRSYAGRNN-ERLEFLGDAILNFVAGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LA+ +L +++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+ D RE D ++ KD KT LQE Q R E P Y ++ ++G Sbjct 124 LDA--DMQTARERVLAWLT-DEFESLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE ++ ++ G+G S++ AEQ Sbjct 181 EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia bellii OSU 85-389] Sequence ID: A8GYE2.1 Length: 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia bellii RML369-C] Sequence ID: Q1RHA2.1 Length: 227 Range 1: 1 to 221 Score:126 bits(316), Expect:8e-35, Method:Compositional matrix adjust., Identities:89/226(39%), Positives:122/226(53%), Gaps:17/226(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M+ E+LEK L Y+FK+K+LL +AL+H S Y + YE LEFLGDA++N I ++ Sbjct 1 MESFEELEKLLDYSFKNKALLTEALSHPSLRQHHEYKANKDYERLEFLGDAVLNLIITEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L EG L+ +++YL+ +E ++ KL L +I I G+ N I +V Sbjct 61 LFNNFKEYNEGNLAKIRSYLVCKETICVVGAKLGLKNYIIMTHGEEIAGGRDNPNNIENV 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS D + KL+ E I +K+ D KT LQE Q + P Sbjct 121 TEALIAAIYLDS--DITTIHNIIGKLWAEFI--KVKD-LTDYDPKTALQEWAQSKDHHIP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 YRLI EG H F V KI Y G+G S KEAE+ AA EL+ Sbjct 176 IYRLIKREGVAHLSTFTVSVKINGYEQTGKGHSIKEAEKNAARELL 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia rickettsii str. 'Sheila Smith'] Sequence ID: A8GQT8.1 Length: 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia rickettsii str. Iowa] Sequence ID: B0BW84.1 Length: 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia africae ESF-5] Sequence ID: C3PMF3.1 Length: 227 Range 1: 1 to 224 Score:126 bits(316), Expect:9e-35, Method:Compositional matrix adjust., Identities:86/229(38%), Positives:122/229(53%), Gaps:17/229(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M+ E+LEK L Y+FK+K LL +AL+H S Y + YE LEFLGDA++N I ++ Sbjct 1 MESFEKLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + N EG L+ +++YL+ +E ++ KL L +I + G+ N I + Sbjct 61 LFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYIIMTHGEEVAGGRDNLNNIENA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + T ++ KL+ E I + D KT LQE Q P Sbjct 121 TEALIAAIYLDSNIET--THDIIEKLWAEFIKV---QNLTDYDPKTALQEWAQASDHHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 YRLI EG H F V K+K+Y G G + KEAE+ AA L+ L Sbjct 176 IYRLIKREGASHSSTFTVLVKVKDYEQTGTGHAIKEAEKNAARSLLHRL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Thermotoga sp. RQ2] Sequence ID: B1LCY9.1 Length: 240 Range 1: 7 to 228 Score:126 bits(316), Expect:1e-34, Method:Compositional matrix adjust., Identities:84/226(37%), Positives:132/226(58%), Gaps:21/226(9%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK---------EHYETLEFLGDALVNFFIV 52 K++E+ +KK G FK++ LL +AL H SY+ + E E LEFLGDA++ F+ Sbjct 7 KIVEEFQKKTGINFKNEELLFRALCHSSYANEQNQAGRKNVESNEKLEFLGDAVLELFVC 66 Query 53 DLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIG 106 ++L + P G L+ +K+ SEE L+++K+ L KF+ + + G+ ++I+ Sbjct 67 EILYKKYPEAEVGDLARVKSAAASEEVLALVSRKMNLGKFLFLGKGEEKTGGRDRDSILA 126 Query 107 DVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKE 166 D FEAL AA+Y+D G + +ELF + F E + I +G + DYKT LQEI Q K Sbjct 127 DAFEALLAAIYLDQGYEK--IKELFEQEF-EFYIEKIMKGEMLFDYKTALQEIVQSEHKV 183 Query 167 RPEYRLISVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAA 210 PEY L+ E + F+VE ++ + +T+ G G++KKEAE+ AA Sbjct 184 PPEYVLVRTEKNDGDRIFVVEVRV-DGKTIATGRGRTKKEAEKEAA 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia peacockii str. Rustic] Sequence ID: C4K1R3.1 Length: 227 Range 1: 1 to 224 Score:125 bits(315), Expect:1e-34, Method:Compositional matrix adjust., Identities:86/229(38%), Positives:122/229(53%), Gaps:17/229(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M+ E+LEK L Y+FK+K LL +AL+H S Y + YE LEFLGDA++N I ++ Sbjct 1 MESFEKLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + N EG L+ +++YL+ +E ++ KL L +I + G+ N I + Sbjct 61 LFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYIIMTHGEEVAGGRDNLNNIENA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + T ++ KL+ E I + D KT LQE Q P Sbjct 121 TEALIAAIYLDSNIET--THDIIEKLWAEFIKV---QNLTDYDPKTALQEWAQASDHHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 YRLI EG H F V K+K+Y G G + KEAE+ AA L+ L Sbjct 176 IYRLIKREGASHASTFTVLVKVKDYEQTGTGHAIKEAEKNAARSLLHRL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudomonas entomophila L48] Sequence ID: Q1I5V8.1 Length: 229 Range 1: 5 to 212 Score:125 bits(315), Expect:1e-34, Method:Compositional matrix adjust., Identities:78/212(37%), Positives:121/212(57%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L++LE+KLGYTFK++ + ALTH SY+ + + E LEFLGDA++NF + + L + P R Sbjct 5 LDRLERKLGYTFKNQDQMLLALTHRSYAGRNN-ERLEFLGDAILNFVVGEALFERFPQAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A L+ E LA+ +L ++R+ G++ E+I+ D EAL A+Y Sbjct 64 EGQLSRLRARLVKGETLARLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 D+ R L + + D L+ + KD KT LQE Q R E P Y ++ ++G Sbjct 124 QDADMQTARERILAWLTDEFDGLTLVD---TNKDPKTRLQEFLQSRACELPRYEVVDIQG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H + F VE ++ ++ G+G S++ AEQ Sbjct 181 EPHCRTFFVECEVVLLNKKSRGQGVSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Candidatus Solibacter usitatus Ellin6076] Sequence ID: Q027L3.1 Length: 271 Range 1: 8 to 235 Score:127 bits(318), Expect:1e-34, Method:Compositional matrix adjust., Identities:85/234(36%), Positives:123/234(52%), Gaps:33/234(14%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEH-----------YETLEFLGDALVNFFIVDLL 55 LE KL Y F D LL +ALTH S + + E LEFLGD+++ F I + L Sbjct 8 LELKLDYRFNDPELLRRALTHSSLANENRPGAGVGSPLNDNEQLEFLGDSVLGFLIAEAL 67 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVF 109 V+ P EG LS LKA+L+S + +A++L+L ++ + R G+ +T++ D Sbjct 68 VRRFPEYHEGDLSRLKAHLVSAAHLHGVARRLDLGSYLELGRSEEMSGGRTKKTLLVDGL 127 Query 110 EALWAAVYIDSGRDAN----FTRELFYKLFKE-----DILSAIKEGRVKKDYKTILQEIT 160 EA+ AA+Y+D G DA T L F + DI AI ++K+ LQE+ Sbjct 128 EAIMAAIYLDGGVDAARAFVATHVLDAPFFGDEEAGTDIQPAI------TNFKSALQELA 181 Query 161 QKRWKERPEYRLISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEEL 213 Q R +P Y ++ GP H K F VE ++ KE+ EG++KK A QRAA L Sbjct 182 QTRRLPQPRYSVVRERGPEHSKTFTVEVRVGKEWTAQAEGRTKKIAAQRAARGL 235 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Vibrio atlanticus LGP32] Sequence ID: B7VK79.1 Length: 225 Range 1: 5 to 222 Score:125 bits(314), Expect:1e-34, Method:Compositional matrix adjust., Identities:76/222(34%), Positives:126/222(56%), Gaps:12/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +++LE+K+GY F D L+ ALTH S + K H E LEFLGD++++F I D L P Sbjct 5 IDKLERKIGYQFNDADLIHLALTHRSAAGK-HNERLEFLGDSILSFVIADDLYHRFPKVN 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ L ++ EL ++++ G++ ++I+ D EA+ AVY Sbjct 64 EGDMSRMRATLVRGHTLAELGREFELGDYLKLGPGELKSGGFRRDSILADAVEAIIGAVY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D R + ++ L +I+ G +KD KT LQE Q R P Y + +++G Sbjct 124 LDS--DTEVVRRIILSWYQSR-LESIQPGVSQKDPKTRLQEFLQGRRNPLPVYTVTNIKG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLL 217 H ++F VE ++ + +G+G S+++AEQ AAE ++ L Sbjct 181 EAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Helicobacter pylori J99] Sequence ID: Q9ZLH2.1 Length: 239 Range 1: 21 to 238 Score:125 bits(315), Expect:2e-34, Method:Compositional matrix adjust., Identities:87/224(39%), Positives:129/224(57%), Gaps:16/224(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 LEK LGY+FKDK LLE+ALTH S + E LEFLGDA++ I +LL EG Sbjct 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGK 80 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFEALWAAVYIDS 120 LS L+A ++S F LA+ + L ++R I +G+ +I+ FEAL A VY+++ Sbjct 81 LSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISKGREKPSILSSAFEALMAGVYLEA 140 Query 121 G--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 G + + L + +K L + DYKT LQE+TQ ++ P Y+L+ +GP Sbjct 141 GLAKVRKIIQNLLNRAYKRLDLE-----HLFMDYKTALQELTQAQFCVIPTYQLLQEKGP 195 Query 179 HHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 H K+F + I++ Y T +GKSKKEAEQ+ A + ++ L+E+ Sbjct 196 DHHKEFEMALYIQDKMYAT-AKGKSKKEAEQQCAYQALQKLKEA 238 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Syntrophobacter fumaroxidans MPOB] Sequence ID: A0LGM1.1 Length: 242 Range 1: 7 to 234 Score:125 bits(315), Expect:2e-34, Method:Compositional matrix adjust., Identities:86/233(37%), Positives:133/233(57%), Gaps:24/233(10%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHY------ETLEFLGDALVNFFIVDLLVQ 57 LE L+ LGY F D+ LL +AL H SY + + ETLEFLGDA++ I L++ Sbjct 7 LEALQNLLGYRFGDEGLLHRALVHRSYLHENPHLDEKDNETLEFLGDAVLGLAISHFLLE 66 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEA 111 P+ EG LS L++ +++E +A +L L +++ + +G + +++ D EA Sbjct 67 QFPDYNEGELSRLRSAIVNERELTRIAVELNLGEYLLLGKGEEMTGGRRKASLLADSLEA 126 Query 112 LWAAVYIDSGRDA--NFTRELF--YKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWK 165 L A++Y+D G DA ++LF Y F +E +L A+ KDYKT LQE+TQ R+K Sbjct 127 LLASIYLDGGLDAVLGVIKKLFDVYLRFEKREHVLKALD-----KDYKTQLQELTQARYK 181 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 P Y L EGP H K F + ++ + G GKSKK+A+Q AAE+ ++++ Sbjct 182 LTPVYVLDREEGPDHDKTFHMNVVLEGQVLAGGSGKSKKDAQQAAAEKALQII 234 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bordetella avium 197N] Sequence ID: Q2KWY0.1 Length: 251 Range 1: 3 to 210 Score:126 bits(316), Expect:2e-34, Method:Compositional matrix adjust., Identities:75/212(35%), Positives:122/212(57%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L LE +LG+ F D++LLE+ALTH S+ + H E LEFLGD+++NF + +L + Sbjct 3 LATLETRLGHHFGDQALLEQALTHRSHGAR-HNERLEFLGDSVLNFVVAAMLFERYAKLD 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS ++A L+ + +AQ+LEL ++R+ G++ +I+ D EAL+ AV+ Sbjct 62 EGDLSRVRANLVKQASLADIAQRLELSPYLRLGEGEMKSGGFRRPSILADAVEALFGAVF 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G DA R++ + + +L+ + + KD KT+LQE Q R P Y +++ G Sbjct 122 LDAGFDA--ARKVIEQQYVP-VLANVDPETLGKDAKTLLQEFLQGRKLALPLYTVVATHG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQ 207 H ++F VE I E + G S++ AEQ Sbjct 179 AAHSQQFEVECAIPALEIKVTAAGASRRAAEQ 210 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia massiliae MTU5] Sequence ID: A8F0M2.1 Length: 227 Range 1: 1 to 224 Score:125 bits(314), Expect:2e-34, Method:Compositional matrix adjust., Identities:86/229(38%), Positives:121/229(52%), Gaps:17/229(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M+ E LEK L Y+FK+K LL +AL+H S Y + YE LEFLGDA++N I ++ Sbjct 1 MESFETLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + N EG L+ +++YL+ +E ++ KL L +I + G+ N I + Sbjct 61 LFRNFANYNEGHLAKIRSYLVCKETICMVGAKLTLKNYIIMTHGEEVAGGRDNLNNIENA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + T ++ KL+ E I + D KT LQE Q P Sbjct 121 TEALIAAIYLDSNIET--TYDIIEKLWAEFIKV---QNLTDYDPKTALQEWAQASDHHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 YRLI EG H F V K+K+Y G G + KEAE+ AA L+ L Sbjct 176 IYRLIKREGASHSSTFTVLVKVKDYEQTGTGHAIKEAEKNAARSLLHRL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Acinetobacter baumannii ATCC 17978] Sequence ID: A3M7P2.2 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Acinetobacter baumannii AYE] Sequence ID: B0VCU0.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Acinetobacter baumannii AB307-0294] Sequence ID: B7GYT0.2 Length: 230 Range 1: 12 to 230 Score:125 bits(314), Expect:2e-34, Method:Compositional matrix adjust., Identities:79/221(36%), Positives:124/221(56%), Gaps:9/221(4%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +L ++GY FK LL+ ALTH S S K +YE LEFLGD+L+ I + L P++ EG Sbjct 12 RLLSRIGYQFKQPELLQLALTHRSVSHKYNYERLEFLGDSLLGMIIANYLYHAYPHENEG 71 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 L+ ++A L+ +E +A L+L + + + G++ E+I+ D EA+ A+Y+D Sbjct 72 RLTRMRATLVRQEALGKIATDLQLSRCLILSTGELKSGGHHRESILADTVEAIIGAIYLD 131 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 S D N +++ K + L I+ KD K+ LQE Q R K P Y ++ ++G Sbjct 132 SS-DLNLLKDIVLKWYTP-YLDHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDA 189 Query 180 HKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLLEE 219 + F VE + + GEG S++ AEQ AA E++KLLE+ Sbjct 190 PHQHFKVECLVDGLSKIHGEGSSRRFAEQAAAAEILKLLEQ 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Helicobacter pylori 26695] Sequence ID: P56118.2 Length: 239 Range 1: 21 to 238 Score:125 bits(314), Expect:2e-34, Method:Compositional matrix adjust., Identities:87/224(39%), Positives:128/224(57%), Gaps:16/224(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 LEK LGY+FKDK LLE+ALTH S + E LEFLGDA++ I +LL EG Sbjct 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGK 80 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFEALWAAVYIDS 120 LS L+A ++S F LA+ + L ++R I G+ +I+ FEAL A VY+++ Sbjct 81 LSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISNGREKPSILSSAFEALMAGVYLEA 140 Query 121 G--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 G + + L + +K L + DYKT LQE+TQ ++ P Y+L+ +GP Sbjct 141 GLAKVQKIMQNLLNRAYKRLDLE-----HLFMDYKTALQELTQAQFCVIPTYQLLKEKGP 195 Query 179 HHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 H K+F + I++ Y T +GKSKKEAEQ+ A + ++ L+E+ Sbjct 196 DHHKEFEMALYIQDKMYAT-AKGKSKKEAEQQCAYQALQKLKEA 238 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia typhi str. Wilmington] Sequence ID: Q68XY5.1 Length: 227 Range 1: 1 to 224 Score:125 bits(313), Expect:2e-34, Method:Compositional matrix adjust., Identities:86/229(38%), Positives:124/229(54%), Gaps:17/229(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M+ E+LE LGY+FK+K LL +AL+H S Y + YE LEFLGDA++N I ++ Sbjct 1 MESFEKLETLLGYSFKNKELLIEALSHPSLRQYHEYKYDKDYERLEFLGDAVLNLLITEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + N +EG L+ +++YL+ +E ++ KL L +I + G+ N I +V Sbjct 61 LFKNFENYKEGNLAKIRSYLVCKETICIVGTKLALKDYIIMTHGEEVAGGRDNPNNIENV 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + T + KL+ E + + D KT LQE Q P Sbjct 121 TEALIAAIYLDS--NIEITHNIIEKLWAEFMKV---QNLTDYDPKTALQEWAQASSNHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 YRLI EG H F V K+K+Y + G S KEAE++AA L+ L Sbjct 176 IYRLIKREGAAHSSIFTVLVKVKDYEQICTGYSIKEAEKKAARCLLHRL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Campylobacter concisus 13826] Sequence ID: A8Z6F6.1 Length: 223 Range 1: 1 to 214 Score:125 bits(313), Expect:2e-34, Method:Compositional matrix adjust., Identities:81/217(37%), Positives:125/217(57%), Gaps:10/217(4%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MK LE+ E+ LGY FK LLE+ALTH S + + E LEFLGDA+++ + + L + Sbjct 1 MKNLEEFERNLGYKFKKSELLEEALTHKSTKQALNNERLEFLGDAVMDLLVAEYLFKKFS 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWA 114 EG +S L+A L++E+ F +A++L++ +F+R+ + G+ ++I+ D FEA+ Sbjct 61 KIAEGDMSKLRAALVNEKSFANMARRLKMGEFLRLSQAEENNGGREKDSILSDAFEAVMG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+++G RE+ L E I ++KDYKT LQE+TQ P Y LI Sbjct 121 AIYLEAGLLK--VREISISLL-ELCYPQIDFAHLEKDYKTALQEVTQATLGVIPTYELIG 177 Query 175 VEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAA 210 GP HKK+F + + + G SKK+A+Q AA Sbjct 178 SFGPDHKKEFEIALLLNGKEISRAVGSSKKQAQQLAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Helicobacter pylori P12] Sequence ID: B6JLQ0.1 Length: 239 Range 1: 21 to 238 Score:125 bits(314), Expect:3e-34, Method:Compositional matrix adjust., Identities:87/224(39%), Positives:128/224(57%), Gaps:16/224(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 LEK LGY+FKDK LLE+ALTH S + E LEFLGDA++ I +LL EG Sbjct 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGK 80 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFEALWAAVYIDS 120 LS L+A ++S F LA+ + L ++R I G+ +I+ FEAL A VY+++ Sbjct 81 LSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISNGREKPSILSSAFEALMAGVYLEA 140 Query 121 G--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 G + + L + +K L + DYKT LQE+TQ ++ P Y+L+ +GP Sbjct 141 GLAKVRKIIQNLLNRAYKRLDLE-----HLFMDYKTALQELTQAQFCVIPTYQLLQEKGP 195 Query 179 HHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 H K+F + I++ Y T +GKSKKEAEQ+ A + ++ L+E+ Sbjct 196 DHHKEFEMALYIQDKMYAT-AKGKSKKEAEQQCAYQALQKLKEA 238 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Acinetobacter baumannii SDF] Sequence ID: B0VTM5.1 Length: 230 Range 1: 12 to 230 Score:125 bits(313), Expect:3e-34, Method:Compositional matrix adjust., Identities:79/221(36%), Positives:124/221(56%), Gaps:9/221(4%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +L ++GY FK LL+ ALTH S S K +YE LEFLGD+L+ I + L P++ EG Sbjct 12 RLLSRIGYQFKQPELLQLALTHRSVSHKYNYERLEFLGDSLLGMIIANYLYHAYPHENEG 71 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 L+ ++A L+ +E +A L+L + + + G++ E+I+ D EA+ A+Y+D Sbjct 72 RLTRMRATLVRQEALGKIATDLQLSRCLILSTGELKSGGHHRESILADTVEAIIGAIYLD 131 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 S D N +++ K + L I+ KD K+ LQE Q R K P Y ++ ++G Sbjct 132 SS-DLNLLKDIVLKWYTP-YLDHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDA 189 Query 180 HKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLLEE 219 + F VE + + GEG S++ AEQ AA E++KLLE+ Sbjct 190 PHQHFKVECLVDGLSKIHGEGASRRFAEQAAAAEILKLLEQ 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia conorii str. Malish 7] Sequence ID: Q92JB0.1 Length: 227 Range 1: 1 to 224 Score:124 bits(312), Expect:3e-34, Method:Compositional matrix adjust., Identities:85/229(37%), Positives:121/229(52%), Gaps:17/229(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M+ E+LEK L Y+FK+K LL +AL+H S Y + YE LEFLGDA++N I ++ Sbjct 1 MESFEKLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + N EG L+ +++YL+ +E ++ KL L +I + G+ N I + Sbjct 61 LFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYIIMTHGEEVAGGRDNLNNIENA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + T ++ L+ E I + D KT LQE Q P Sbjct 121 TEALIAAIYLDSNIET--THDIIENLWAEFIKV---QNLTDYDPKTALQEWAQASDHHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 YRLI EG H F V K+K+Y G G + KEAE+ AA L+ L Sbjct 176 IYRLIKREGASHSSTFTVLVKVKDYEQTGTGHTIKEAEKNAARSLLHRL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Dehalococcoides mccartyi 195] Sequence ID: Q3Z7Q8.1 Length: 237 Range 1: 1 to 230 Score:125 bits(313), Expect:3e-34, Method:Compositional matrix adjust., Identities:84/234(36%), Positives:127/234(54%), Gaps:18/234(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDL 54 M L +LEK LG F++ SLLE+AL H S+ + E +EFLGDA++ D Sbjct 1 MLDLTELEKSLGVKFENLSLLEQALIHTSWVNENPNHLSGSNERMEFLGDAVLGVIFADR 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDV 108 L P+ +EG L+ ++ L+ E +A + L K++ + RG + + Sbjct 61 LYHDFPDIQEGDLTRFRSLLVRRESLVRVALGINLGKYLYLGRGEDASKGRFKPANLAGA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 FEA+ AA+Y+D G DA TRE+ ++LFK + + ++ DYK+ LQE+ Q +++ P Sbjct 121 FEAVLAAIYLDKGIDA--TREVIFRLFKTE-MERVQTLSSNIDYKSRLQELVQAQFQLTP 177 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLLEES 220 YR+I GP H FI E E + L G G+SKKEAE AA+E ++ E S Sbjct 178 RYRIIDFSGPEHNHLFIAEV-YTEDKVLAEGSGRSKKEAETSAAKEALQQFENS 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Psychrobacter arcticus 273-4] Sequence ID: Q4FUV6.1 Length: 265 Range 1: 31 to 254 Score:125 bits(315), Expect:3e-34, Method:Compositional matrix adjust., Identities:78/226(35%), Positives:123/226(54%), Gaps:11/226(4%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 ++ L L +KLGY F D SL + ALTH S+ K++YE LEFLGDAL+ + + L P Sbjct 31 IQRLAVLTRKLGYVFNDLSLAKLALTHRSFDSKKNYERLEFLGDALLGMIVGEALYHRYP 90 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEALWA 114 + EG L+ ++A L+ +E ++AQ LEL + R G+ +I+ D E+L Sbjct 91 TQNEGRLTRMRATLVRQESLVIIAQNLELSNQLILGVGERKGGGRNRASILADAVESLIG 150 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS +D N TRE + D++ + + + KD K+ LQE Q + + P Y L+ Sbjct 151 AIYLDS-QDMNITRECVLSWYG-DLIDNVNDQKALKDAKSRLQEWLQSKQFDLPHYELME 208 Query 175 VEGPHHKKKFIVEAKIKEYRTLG---EGKSKKEAEQRAAEELIKLL 217 G + F+V ++ G+S++ AEQ+AAE +I L Sbjct 209 TRGNAPHQLFVVRCQVNIINCPDITESGESRRIAEQKAAELMINQL 254 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella sediminis HAW-EB3] Sequence ID: A8FSD6.1 Length: 225 Range 1: 4 to 223 Score:124 bits(312), Expect:3e-34, Method:Compositional matrix adjust., Identities:81/225(36%), Positives:127/225(56%), Gaps:13/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K + +L + LGY F D+SLLE ALTH S S K H E LEFLGD++++ I D L P Sbjct 4 IKNMPRLCRTLGYEFNDQSLLEHALTHRSASSK-HNERLEFLGDSILSIIISDALFHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + + + +L ++ + G++ E+II D EA+ Sbjct 63 KATEGDLSRMRATLVCGKMLAEIGFEFKLGDYLNLGPGELKSGGFRRESIIADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVYIDSG + R L ++ + AI + +KD KT+LQE+ Q K P Y++I Sbjct 123 AVYIDSGVEK--CRCLVLSWYESRL--AIIQPVNQKDPKTLLQELLQGFKKPLPVYKVID 178 Query 175 VEGPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLL 217 ++G H + F VE ++E +G S+++AEQ AA + ++L+ Sbjct 179 IKGEAHAQTFTVECYVEELSKPVIGIASSRRKAEQLAAADALELM 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ralstonia pickettii 12J] Sequence ID: B2U981.1 Length: 256 Range 1: 3 to 213 Score:125 bits(313), Expect:5e-34, Method:Compositional matrix adjust., Identities:79/215(37%), Positives:119/215(55%), Gaps:12/215(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L+ L+++LGY F LL++ALTH S+S H E LEFLGD+++N + D+L Sbjct 3 LDALQQRLGYRFSKPELLQQALTHRSHSAM-HNERLEFLGDSILNCAVADMLYGMFGKLD 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ ++ +AQ L+L +R+ G++ +I+ D EA++ AV+ Sbjct 62 EGDLSRVRANLVKQQALYEIAQMLQLPDALRLGEGELKSGGFRRPSILADALEAIFGAVF 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G DA R L KL+ IL + + KD KT+LQE Q P Y +++ G Sbjct 122 LDGGFDA--ARTLIRKLYIP-ILEQVDPRTLGKDAKTLLQEYLQGHKIALPLYTVVATHG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAA 210 H ++F VE I E R G G S++ AEQ AA Sbjct 179 AAHNQQFEVECSIPKLEIRVSGSGASRRAAEQSAA 213 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Thermotoga maritima MSB8] Sequence ID: Q9X0I6.1 Length: 240 Range 1: 7 to 228 Score:124 bits(311), Expect:7e-34, Method:Compositional matrix adjust., Identities:81/225(36%), Positives:130/225(57%), Gaps:19/225(8%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK---------EHYETLEFLGDALVNFFIV 52 K++E+ +K+ G FK++ LL +AL H SY+ + E E LEFLGDA++ F+ Sbjct 7 KIVEEFQKETGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVC 66 Query 53 DLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIG 106 ++L + P G L+ +K+ SEE ++++K+ L KF+ + + G+ ++I+ Sbjct 67 EILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILA 126 Query 107 DVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKE 166 D FEAL AA+Y+D G + +ELF + F E + I +G + DYKT LQEI Q K Sbjct 127 DAFEALLAAIYLDQGYEK--IKELFEQEF-EFYIEKIMKGEMLFDYKTALQEIVQSEHKV 183 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAA 210 PEY L+ E + F+VE ++ + G+G++KKEAE+ AA Sbjct 184 PPEYILVRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAA 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Helicobacter pylori G27] Sequence ID: B5Z735.1 Length: 239 Range 1: 21 to 238 Score:124 bits(310), Expect:8e-34, Method:Compositional matrix adjust., Identities:87/224(39%), Positives:128/224(57%), Gaps:16/224(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 LEK LGY+FKDK LLE+ALTH S + E LEFLGDA++ I +LL EG Sbjct 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGK 80 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFEALWAAVYIDS 120 LS L+A ++S F LA+ + L ++R I +G+ +I+ FEAL A VY+++ Sbjct 81 LSKLRAAIVSAHGFTKLAKAIALQDYLRVSSSEEISKGREKPSILSSAFEALMAGVYLEA 140 Query 121 G--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 G + + L + +K L + DYKT LQE+TQ ++ P Y+L+ +GP Sbjct 141 GLAKVRKIIQNLLNRAYKRLDLE-----HLFMDYKTALQELTQAQFCVIPTYQLLQEKGP 195 Query 179 HHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 H K+F + I++ Y T +GKSKKEAEQ+ A ++ L+E+ Sbjct 196 DHHKEFEMALYIQDKMYAT-AKGKSKKEAEQQCAYYALQKLKEA 238 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pelotomaculum thermopropionicum SI] Sequence ID: A5D1H6.1 Length: 241 Range 1: 11 to 224 Score:124 bits(310), Expect:9e-34, Method:Compositional matrix adjust., Identities:81/222(36%), Positives:125/222(56%), Gaps:26/222(11%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQYSP 60 L+ +LG ++D+ LL +ALTH S++ + E+ + LEFLGDA++ + D L + P Sbjct 11 LKNRLGIAWRDEGLLTRALTHSSFTYENRQNGLENNQRLEFLGDAVLELAVSDYLYRSKP 70 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWA 114 EG L+ L+A ++ E +A++LEL + + +G + +I+ D FEAL Sbjct 71 EMDEGDLTKLRASVVCEPSLARVARELELGTCLYMGKGEERSGGRDRPSILADAFEALLG 130 Query 115 AVYIDSG--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 AVY+D G + A + L D+L EGR+++DYKT LQE+ Q+R E+ +Y + Sbjct 131 AVYLDQGLEKAAGLAIKYLAPLIG-DVL----EGRLERDYKTELQELVQQRGGEQVQYVI 185 Query 173 ISVEGPHHKKKFIVEAKIKEYRTL----GEGKSKKEAEQRAA 210 + EGP H K F YR + G G+SKKEAEQ+AA Sbjct 186 LKEEGPDHHKSFTAGVL---YRGVLVGQGTGRSKKEAEQQAA 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Carboxydothermus hydrogenoformans Z-2901] Sequence ID: Q3AC58.1 Length: 235 Range 1: 9 to 229 Score:123 bits(309), Expect:1e-33, Method:Compositional matrix adjust., Identities:87/224(39%), Positives:126/224(56%), Gaps:16/224(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQYSP 60 LEK LG+ F + S+L A+TH SY+ + EH E LEFLGDA++ FI D L + P Sbjct 9 LEKILGFNFNNPSILLSAITHPSYAFEHPEEGIEHNERLEFLGDAVLELFISDYLFRTFP 68 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI----NETI--IGDVFEALWA 114 K EG L+ L++ L+ E LA K+ L KF+R+ +G+ N+ + + + EA+ Sbjct 69 QKSEGDLTKLRSRLVCAESLYELAFKINLDKFLRLGKGEFKAGGNQRMSNLANAVEAVIG 128 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVY D G +A F+ +L+ E + E ++ KD KT LQE+ QK Y ++ Sbjct 129 AVYFDCGIEAAFS--FITRLYGEKLKPENLE-QLPKDEKTTLQELLQKEKNNVLRYEILL 185 Query 175 VEGPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLL 217 EGP H+K F I + G GKSKKEAEQ AA++ ++LL Sbjct 186 EEGPPHQKIFTAGVIINDKLIATGRGKSKKEAEQEAAKKALELL 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Vibrio cholerae O395] Sequence ID: A5F5H8.1 Length: 225 Range 1: 5 to 222 Score:123 bits(308), Expect:1e-33, Method:Compositional matrix adjust., Identities:78/222(35%), Positives:126/222(56%), Gaps:12/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 + +L KLGYTFK+ LL ALTH S + K H E LEFLGD++++F I D L + P Sbjct 5 MNKLTSKLGYTFKETELLNLALTHRSANGK-HNERLEFLGDSILSFVIADELYRRFPKVN 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ L ++ +L ++++ G++ ++I+ D EA+ A+Y Sbjct 64 EGDMSRMRATLVRGNTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D R + + ++ L IK G +KD KT LQE Q R K P Y + +++G Sbjct 124 LDS--DLETARRIVLEWYQCR-LEEIKPGASQKDPKTRLQEFLQGRRKPLPVYTVTNIKG 180 Query 178 PHHKKKFIVEAKIKEYRT--LGEGKSKKEAEQRAAEELIKLL 217 H ++F V ++ T +G+G S+++AEQ AAE ++ L Sbjct 181 EAHNQEFTVACEVAGMDTPVIGKGTSRRKAEQAAAETALEQL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Sequence ID: Q8RGX3.1 Length: 234 Range 1: 1 to 223 Score:123 bits(309), Expect:1e-33, Method:Compositional matrix adjust., Identities:78/226(35%), Positives:124/226(54%), Gaps:15/226(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVDL 54 MK L LE KL Y F D++LL+ AL H S K + E LE LGDA+++ + + Sbjct 1 MKNLLDLEHKLNYYFNDRNLLKNALLHKSLGNERKEYKNQTNERLELLGDAVLDLIVAEY 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDV 108 L + N EG ++ LKA ++SE +++++ + KF+ + RG++ E+I+ D Sbjct 61 LYKSYKNASEGPIAKLKAMIVSEPILAKISRQIGVGKFLMLSRGEVMSGGRNRESILADS 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 FEA+ AVYIDS D +F + + I+E D+K+ILQE QK +K P Sbjct 121 FEAILGAVYIDSNLD---EARVFALSHIKQYIDHIEENEDILDFKSILQEYVQKEFKTVP 177 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 Y L++ GP H K+F ++ + Y+ ++KK+AEQ +A+ L Sbjct 178 TYELVAERGPDHMKEFEIQVIVGNYKEKAVARNKKKAEQLSAKALC 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Desulfotalea psychrophila LSv54] Sequence ID: Q6ANV0.1 Length: 241 Range 1: 18 to 239 Score:123 bits(309), Expect:1e-33, Method:Compositional matrix adjust., Identities:85/230(37%), Positives:125/230(54%), Gaps:25/230(10%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYS-----KKEHYETLEFLGDALVNFFIVDLLVQYSP 60 + EKK+ Y F D LL+KAL H SY+ ++ E LEF+GDA+++ + + L + P Sbjct 18 EFEKKINYKFIDLRLLQKALIHSSYAFEQAQAGKNNERLEFVGDAVLDLVVGNALYRRFP 77 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKIN------ETIIGDVFEALWA 114 REG L+ L+A L++E +A+K+ L F+ + +G+ N +I+ +EA+ Sbjct 78 EMREGELTRLRAALVNEGHLATMARKINLGYFLCLGKGEDNSKGREKSSILSCAYEAVIG 137 Query 115 AVYIDSGRD--ANFTRELFYKLF---KEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 A++ D G D A F + KED+L A D K+ LQEI Q++ E P Sbjct 138 AIFQDGGYDAVAALVERFFLPVIDRRKEDLLLA--------DAKSRLQEILQEKHNEGPS 189 Query 170 YRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLE 218 YRL + EGP HKK+F + + E GE SKKEAEQR A IK +E Sbjct 190 YRLDNEEGPSHKKRFTISVLFRDEVLGTGEAGSKKEAEQRGAALAIKKIE 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Vibrio cholerae M66-2] Sequence ID: C3LR04.1 Length: 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Vibrio cholerae O1 biovar El Tor str. N16961] Sequence ID: Q9KPB2.1 Length: 225 Range 1: 5 to 222 Score:123 bits(308), Expect:1e-33, Method:Compositional matrix adjust., Identities:78/222(35%), Positives:125/222(56%), Gaps:12/222(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 + +L KLGYTFK+ LL ALTH S + K H E LEFLGD++++F I D L + P Sbjct 5 MNKLTSKLGYTFKETELLNLALTHRSANGK-HNERLEFLGDSILSFVIADELYRRFPKVN 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ L ++ +L ++++ G++ ++I+ D EA+ A+Y Sbjct 64 EGDMSRMRATLVRGNTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D R + + + L IK G +KD KT LQE Q R K P Y + +++G Sbjct 124 LDS--DLETARSIVLEWY-HGRLEEIKPGASQKDPKTRLQEFLQGRRKPLPVYTVTNIKG 180 Query 178 PHHKKKFIVEAKIKEYRT--LGEGKSKKEAEQRAAEELIKLL 217 H ++F V ++ T +G+G S+++AEQ AAE ++ L Sbjct 181 EAHNQEFTVACEVAGMDTPVIGKGTSRRKAEQAAAETALEQL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia prowazekii str. Madrid E] Sequence ID: Q9ZE31.1 Length: 225 Range 1: 1 to 224 Score:123 bits(308), Expect:1e-33, Method:Compositional matrix adjust., Identities:85/229(37%), Positives:122/229(53%), Gaps:17/229(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M+ E+LE LGY+FK+K LL +AL+H S Y + YE LEFLGDA++N I ++ Sbjct 1 MESFEKLETLLGYSFKNKELLIEALSHPSLRQYHEYKYDKDYERLEFLGDAVLNLLITEI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + N +EG L+ +++YL+ +E ++ KL L +I + G+ N I + Sbjct 61 LFKNFENYKEGNLAKIRSYLVCKETICIVGTKLALKDYIIMTHGEEVAGGRDNPNNIENA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + T + KL+ E + + D KT LQE Q P Sbjct 121 TEALIAAIYLDS--NIEITHNIIEKLWAEFMKV---QNLTDYDPKTALQEWAQANSHHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 YRLI EG H F V K+K+Y G S KEAE++AA L+ L Sbjct 176 IYRLIKREGAAHSSIFTVLVKVKDYEQTCTGYSIKEAEKKAARSLLHRL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ralstonia solanacearum GMI1000] Sequence ID: Q8Y0I1.1 Length: 256 Range 1: 3 to 213 Score:123 bits(309), Expect:2e-33, Method:Compositional matrix adjust., Identities:79/215(37%), Positives:119/215(55%), Gaps:12/215(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE L+++LGY F LL++ALTH S++ H E LEFLGD+++N + D+L Sbjct 3 LEALQQRLGYRFSKPELLQQALTHRSHNAM-HNERLEFLGDSILNCAVADMLYGMFGKLD 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ ++ +AQ L L +R+ G++ +I+ D EA++ AV+ Sbjct 62 EGDLSRVRANLVKQQALYEIAQMLLLPDELRLGEGELKSGGFRRPSILADALEAIFGAVF 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G DA R L KL+ IL + + KD KT+LQE Q P+Y +++ G Sbjct 122 LDGGFDA--ARTLIRKLYIP-ILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYAVVATHG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAA 210 H ++F VE I E R G G S++ AEQ AA Sbjct 179 AAHNQQFEVECTIPKLEIRVSGSGASRRAAEQSAA 213 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Idiomarina loihiensis L2TR] Sequence ID: Q5R106.1 Length: 229 Range 1: 8 to 228 Score:122 bits(307), Expect:2e-33, Method:Compositional matrix adjust., Identities:80/225(36%), Positives:129/225(57%), Gaps:12/225(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LEK +GY+F+ + LL +A+TH S S H E LEFLGD+++ I + L Q P Sbjct 8 LTELEKIVGYSFEQQGLLHQAMTHRSASST-HNERLEFLGDSILGLVIAEALYQKFPKVA 66 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A ++ L +K+ L F+ + +G++ E+I+ D EA+ A+Y Sbjct 67 EGDLSRMRAAIVCGRSLAKLGKKMGLGDFLSLGQGELKSGGYRRESILADAVEAIIGAIY 126 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D + R++ F E L+ I+ G +KD KT LQE+ Q R K PEY +++ +G Sbjct 127 LDS--DMDTIRQVILNWF-EPQLTLIEPGTSQKDPKTRLQELLQARQKPLPEYDVVATQG 183 Query 178 PHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLLEES 220 H ++F V ++ + G G S+++AEQ AA ++ L+ES Sbjct 184 QAHNQQFTVNCSVEGIESPFKGTGTSRRKAEQAAATAALEHLQES 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Hahella chejuensis KCTC 2396] Sequence ID: Q2SL32.1 Length: 226 Range 1: 5 to 219 Score:122 bits(306), Expect:2e-33, Method:Compositional matrix adjust., Identities:79/219(36%), Positives:124/219(56%), Gaps:12/219(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L++ LGYTFK+ +LL ALTH S+ + + E LEFLGD+++NF I D L R Sbjct 5 LERLQRALGYTFKEPALLTLALTHRSFGGRNN-ERLEFLGDSVLNFIIADYLFGRFEEAR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS L+A ++ +A++ +L +++R+ G++ E+I+ D E++ A+Y Sbjct 64 EGQLSRLRARMVKGVTLAEIAREFDLGEYLRLGSGEMKSGGFRRESILADALESIIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G + R L + E L + +KD KT LQE Q R P Y +ISV+G Sbjct 124 LDAGFEVCADRVLNW---FEARLQKLNLKDTQKDSKTRLQEYLQARQLNLPRYEVISVQG 180 Query 178 PHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELI 214 H + F V +I T G G S++ AEQ+AA++ + Sbjct 181 EAHAQTFHVRCEIDGLSDATEGTGSSRRVAEQKAAKQAL 219 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Aliarcobacter butzleri RM4018] Sequence ID: A8EV88.1 Length: 224 Range 1: 1 to 207 Score:122 bits(305), Expect:3e-33, Method:Compositional matrix adjust., Identities:82/211(39%), Positives:120/211(56%), Gaps:12/211(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M +LEK L Y FK+K+L+ +ALTH S+ K + E LEFLGDA++N + + L P Sbjct 1 MSDYSKLEKCLDYQFKNKNLIIEALTHKSFKKPYNNERLEFLGDAVLNLIVGEYLYLKFP 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 EG LS ++A L++E F LA +++L ++I I +G+ +I+ D FEA+ Sbjct 61 KSNEGELSKIRASLVNETGFTRLANEIKLGEYIFISTAEERNKGRTKASILSDAFEAIMG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y++SG N + + ++ +E I + DYKT LQEITQ R+ PEY++ Sbjct 121 AIYLESG--LNTLKPIILRILEES-YDKINLDVLFSDYKTALQEITQARFASIPEYKIEG 177 Query 175 VEGPHHKKKFIVEAKI--KEYRTLGEGKSKK 203 GP HKK+F V I K Y GKSKK Sbjct 178 SYGPDHKKEFEVSIWIDGKNYGK-ASGKSKK 207 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xylella fastidiosa M12] Sequence ID: B0U3D8.1 Length: 227 Range 1: 10 to 226 Score:121 bits(304), Expect:5e-33, Method:Compositional matrix adjust., Identities:80/221(36%), Positives:119/221(53%), Gaps:12/221(5%) Query 8 EKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFL 67 ++++GY F D SLL +AL H S + H E LEFLGD++VN I + L Q P EG L Sbjct 10 QQRIGYVFTDPSLLLQALRHCS-AGTPHNERLEFLGDSVVNLLIAEALFQRWPRADEGAL 68 Query 68 SPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSG 121 + ++ L+ E +A+ ++L + + + G++ ++I+ D EA+ AA+Y+D+ Sbjct 69 TRARSELVRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVIAAIYLDA- 127 Query 122 RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHK 181 D R + F E L+A+ G+ +KD KT LQE Q R P Y LI G H Sbjct 128 -DLATCRTVVLPWF-ETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFESGDPHT 185 Query 182 KKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 K F V + E RT GEG S++ AEQ AA I L+ + Sbjct 186 KHFRVSCTLGELKLRTEGEGSSRRLAEQDAASHAINQLDSN 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Campylobacter curvus 525.92] Sequence ID: A7H186.1 Length: 223 Range 1: 1 to 214 Score:121 bits(304), Expect:5e-33, Method:Compositional matrix adjust., Identities:81/217(37%), Positives:120/217(55%), Gaps:10/217(4%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MK LE L+K LGY F++ LL +ALTH S E LEFLGDA+++ + + L + Sbjct 1 MKDLENLQKLLGYEFENTKLLNEALTHKSTKLPYSNERLEFLGDAVMDLIVGEYLFKKFS 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWA 114 EG +S L+A L++E+ F +A+ L++ +FI + + N +++ D FEA+ Sbjct 61 KTNEGDMSKLRAALVNEKSFANMARHLQIGEFIHLSTAEANNGGREKASLLSDAFEAVMG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AVY+++G D RE+ +L E I + KDYKT LQEITQ P Y L+ Sbjct 121 AVYLEAGLDK--VREIAVRLL-EICYPKIDFSHLVKDYKTALQEITQASLGTTPIYELVR 177 Query 175 VEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAA 210 GP HKK+F + + + + SKKEA+Q AA Sbjct 178 SFGPDHKKEFEIALLLNDKEISRAIANSKKEAQQMAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Roseiflexus castenholzii DSM 13941] Sequence ID: A7NGC5.1 Length: 234 Range 1: 3 to 230 Score:121 bits(304), Expect:5e-33, Method:Compositional matrix adjust., Identities:82/231(35%), Positives:120/231(51%), Gaps:18/231(7%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE--------HYETLEFLGDALVNFFIVD 53 K L++L +L TF D+ LL +ALTH S+ + E LEFLGDA+VNF Sbjct 3 KPLDELCARLDVTFSDQRLLWQALTHRSFLNERVDERLSLFSNERLEFLGDAIVNFLATT 62 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGD 107 L+ + P+ EG+L+ +A LI E A++ +L + RG + +++ D Sbjct 63 LVFERFPDAGEGYLTAWRAALIRTETLASFARRYDLGSHTLLARGEESSGARQRPSLLAD 122 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKER 167 FEA+ AA++ID G DA R+ LF E+ L+ ++E + DYK+ LQ Q Sbjct 123 TFEAVVAAIFIDQGLDA--VRKFLLPLF-EETLATLQEQGLPVDYKSKLQARIQAERGIT 179 Query 168 PEYRLISVEGPHHKKKFIVEA-KIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 P YR+I GP H+ +F EA E G G SK+ AEQ AA + + L Sbjct 180 PRYRMIERSGPEHQPEFTFEALAGDESLGTGRGASKQAAEQDAARDALDRL 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Clostridium botulinum B str. Eklund 17B (NRP)] Sequence ID: B2TJ22.1 Length: 232 Range 1: 9 to 230 Score:121 bits(304), Expect:6e-33, Method:Compositional matrix adjust., Identities:82/225(36%), Positives:127/225(56%), Gaps:14/225(6%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYSPNK 62 +E +LG F + SL++ ALTH S+ + ++ E LEFLGD+++ I + L +K Sbjct 9 IENRLGVYFNNPSLIKTALTHSSFGNQFKDAKYNERLEFLGDSVLQLCITEYLFNKFKDK 68 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAV 116 EG L+ +++ ++ E +A+KL L ++IR+ + G+ +I D EA+ AAV Sbjct 69 SEGELTKIRSLIVCENSLYEIAKKLSLGEYIRMSKGEELTGGRERMSIQADAVEAVIAAV 128 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 Y+D G F + F+E I AI + D+KT LQE+ QK + +Y L+ E Sbjct 129 YLDKG--IGFVNDFILLHFEEMINKAIN-NEIVLDFKTKLQELLQKDGEILIQYELVKYE 185 Query 177 GPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLLEES 220 GP H++KF I E +GEG SKKEAEQ AA+E +K LE++ Sbjct 186 GPPHRRKFFTNVIINEKVMGIGEGYSKKEAEQNAAKEALKRLEKN 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xylella fastidiosa 9a5c] Sequence ID: Q9PB98.2 Length: 227 Range 1: 10 to 226 Score:121 bits(303), Expect:6e-33, Method:Compositional matrix adjust., Identities:80/221(36%), Positives:119/221(53%), Gaps:12/221(5%) Query 8 EKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFL 67 ++++GY F D SLL +AL H S + H E LEFLGD++VN I + L Q P EG L Sbjct 10 QQRIGYVFTDPSLLLQALRHCS-AGTPHNERLEFLGDSVVNLLIAEALFQRWPRADEGAL 68 Query 68 SPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSG 121 + ++ L+ E +A+ ++L + + + G++ ++I+ D EA+ AA+Y+D+ Sbjct 69 TRARSELVRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVIAAIYLDA- 127 Query 122 RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHK 181 D R + F E L+A+ G+ +KD KT LQE Q R P Y LI G H Sbjct 128 -DLATCRTVVLPWF-ETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFESGDPHT 185 Query 182 KKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 K F V + E RT GEG S++ AEQ AA I L+ + Sbjct 186 KHFRVSCTLGELKLRTEGEGSSRRLAEQDAASHAIDQLDSN 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella tularensis subsp. novicida U112] Sequence ID: A0Q7W6.1 Length: 230 Range 1: 12 to 223 Score:121 bits(304), Expect:7e-33, Method:Compositional matrix adjust., Identities:82/216(38%), Positives:134/216(62%), Gaps:11/216(5%) Query 11 LGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPL 70 LGY FKD +LL +ALTH S +KK +YE LEFLGD++++F I ++L + + EG LS L Sbjct 12 LGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQL 70 Query 71 KAYLISEEFFNLLAQKLELHKFIRI----KRGKINETIIGDVFEALWAAVYIDSGRDANF 126 ++ L+ LA L++ ++I + + G E I+ DVFEA+ A+Y+DS D Sbjct 71 RSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDVFEAVIGAIYLDS--DFAT 128 Query 127 TRELFYKLFKEDILSAIKEGRVK-KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFI 185 +++ K + + I+S+I +K KD K+ LQEI + PEY + +++G H+++F Sbjct 129 VKKVILKWY-QPIISSINLDTIKVKDSKSKLQEILLQNALSLPEYSIETIDGKDHEQQFT 187 Query 186 VEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 V A K+ R +G S+K+AEQ+AAE++I++L + Sbjct 188 VVAMSKDLNLRVKAQGTSRKKAEQKAAEKMIEMLSQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Helicobacter pylori Shi470] Sequence ID: B2UTG4.1 Length: 238 Range 1: 20 to 236 Score:121 bits(304), Expect:7e-33, Method:Compositional matrix adjust., Identities:86/223(39%), Positives:126/223(56%), Gaps:16/223(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 LEK LGY+FKDK LLE+ALTH S + E LEFLGDA++ I +LL EG Sbjct 20 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGK 79 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFEALWAAVYIDS 120 LS L+A ++S F LA+ + L ++ I G+ +I+ FEAL A VY+++ Sbjct 80 LSKLRASIVSAHGFTKLAKVIALQDYLHISSSEEISNGREKPSILSSAFEALMAGVYLEA 139 Query 121 G--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 G + + L + +K L + DYKT LQE+TQ ++ P Y+L+ +GP Sbjct 140 GLAKVQKIIQNLLNRAYKRLDLE-----HLFMDYKTALQELTQAQFCVIPTYQLLKEKGP 194 Query 179 HHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 H K+F + I++ Y T +GKSKKEAEQ+ A + ++ L+E Sbjct 195 DHHKEFEMALYIQDKIYAT-AKGKSKKEAEQQCAYQALQKLKE 236 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Oceanobacillus iheyensis HTE831] Sequence ID: Q8ER05.1 Length: 228 Range 1: 6 to 228 Score:121 bits(303), Expect:7e-33, Method:Compositional matrix adjust., Identities:81/228(36%), Positives:124/228(54%), Gaps:19/228(8%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEH-------YETLEFLGDALVNFFIVDLLVQYS 59 LE+ LG +F+ K+LL++A TH SY EH E LEFLGDA++ + L + + Sbjct 6 LEEHLGISFQQKALLKEAFTHSSYVN-EHRKQRLSDNERLEFLGDAVLELAVSQYLYRNN 64 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALW 113 + EG ++ L+A ++ E A++LE KF+R+ +G + I+ D FEA Sbjct 65 KDMPEGEMTKLRAAIVCEPSLKNFAEELEFGKFLRLGKGEQQTGGRERPAILADAFEAFL 124 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 A+Y+D G D N L +F + A DYK+ LQE Q+ ++ EYR+I Sbjct 125 GALYLDQGFD-NVLDFLNIHVFPKLTTGAFSHAM---DYKSQLQEFVQQHKDQKIEYRII 180 Query 174 SVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIKLLEES 220 +GP H K+F+ E I+E +G G++KKEAEQRAA+ + + S Sbjct 181 EEKGPSHNKEFVAEVVIQEKAAGIGTGRTKKEAEQRAAKNALDSINNS 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rickettsia canadensis str. McKiel] Sequence ID: A8EXI3.1 Length: 227 Range 1: 1 to 224 Score:120 bits(302), Expect:9e-33, Method:Compositional matrix adjust., Identities:84/229(37%), Positives:118/229(51%), Gaps:17/229(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS------YSKKEHYETLEFLGDALVNFFIVDL 54 M +LEK LGY+FK+K LL +AL+H S Y + YE LEFLGDA++N I + Sbjct 1 MSSFNELEKLLGYSFKNKELLIEALSHPSLRQHHEYKDNKDYERLEFLGDAVLNLVITKI 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDV 108 L + EG L+ +++YL+ +E ++ KL L +I + G+ N I + Sbjct 61 LFSNFASYNEGNLAKIRSYLVCKETICMVGAKLALKDYIIMTYGEEVAGGRDNPNNIENA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 EAL AA+Y+DS + T + +L+ E I + D KT LQE Q P Sbjct 121 TEALIAAIYLDSNIET--THNIIGQLWAEFIKV---QNLTDYDPKTALQEWAQASDHHLP 175 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 Y LI EG H F V K+K+Y +G G S KEAE+ AA L+ L Sbjct 176 IYCLIKREGAAHSSTFTVLVKVKDYEQIGIGYSIKEAEKNAARSLLHRL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pseudoalteromonas translucida TAC125] Sequence ID: Q3IDL2.2 Length: 225 Range 1: 3 to 221 Score:120 bits(302), Expect:1e-32, Method:Compositional matrix adjust., Identities:77/223(35%), Positives:125/223(56%), Gaps:11/223(4%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 K + +L K + Y F D+ LLE+A+TH S+ K +H E LEFLGD++++F I + L P Sbjct 3 KNVTELYKTIDYIFADQGLLEQAMTHRSH-KGQHNERLEFLGDSILSFVIANALYAKFPK 61 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAA 115 REG LS +++ L+ + + L ++R+ G++ E+ + D EA+ A Sbjct 62 AREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGELKSGGFRRESTLADAVEAIIGA 121 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 V++DS D EL ++E L+AI G +KD KT+LQE Q R P Y ++ Sbjct 122 VFLDS--DIERCGELILSWYEER-LNAISPGLNQKDPKTLLQEHLQARKLSLPGYTVVDT 178 Query 176 EGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIKLL 217 +G H + F VE + + + G S+++AEQ+AAE+ +K+L Sbjct 179 KGQAHNQTFTVECIVDGMDSIISVGSSRRKAEQKAAEKALKIL 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Clostridium botulinum E3 str. Alaska E43] Sequence ID: B2V4D6.1 Length: 232 Range 1: 9 to 230 Score:120 bits(302), Expect:1e-32, Method:Compositional matrix adjust., Identities:82/225(36%), Positives:127/225(56%), Gaps:14/225(6%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYSPNK 62 +E +LG F + SL++ ALTH S+ + ++ E LEFLGD+++ I + L +K Sbjct 9 IENRLGVYFNNPSLIKTALTHSSFGNQFKDAKYNERLEFLGDSVLQLCITEYLFNKFKDK 68 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAV 116 EG L+ +++ ++ E +A+KL L ++IR+ + G+ +I D EA+ AAV Sbjct 69 SEGELTKIRSLIVCENSLYEIAKKLSLGEYIRMSKGEELTGGRERMSIQADAVEAVIAAV 128 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 Y+D G F + F+E I AI + D+KT LQE+ QK + +Y L+ E Sbjct 129 YLDKG--IGFVNDFILLHFEEMINKAIN-NEIVLDFKTKLQELLQKDGEILIQYELLKYE 185 Query 177 GPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLLEES 220 GP H++KF I E +GEG SKKEAEQ AA+E +K LE++ Sbjct 186 GPPHRRKFFTNVIINEKVMGIGEGYSKKEAEQNAAKEALKRLEKN 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Actinobacillus succinogenes 130Z] Sequence ID: A6VLV8.1 Length: 224 Range 1: 1 to 222 Score:120 bits(301), Expect:2e-32, Method:Compositional matrix adjust., Identities:80/226(35%), Positives:132/226(58%), Gaps:12/226(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MK L++L+ K+GY F + +LL++ALTH S + K H E LEFLGDA++N I + L P Sbjct 1 MKHLDRLQHKIGYEFSNLTLLKQALTHRS-AAKVHNERLEFLGDAILNLTIGEALYLQFP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWA 114 + EG LS ++A L+ E+ LA + +L ++ + G++ +I+ D EA+ Sbjct 60 HCNEGELSRMRATLVREKTLAELAHQFDLGNYMALGAGELKSGGFRRASILADCVEAIIG 119 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+ +DS + T E+ + + E +L I+ G +KD KT LQE Q + P Y + Sbjct 120 AMSLDS--NLPKTMEIVRRWY-EVLLRDIQPGENQKDPKTRLQEYLQGKRLALPAYNVTD 176 Query 175 VEGPHHKKKFIVEAKIKEY-RT-LGEGKSKKEAEQRAAEELIKLLE 218 ++G H + F VE ++ RT +G S+++AEQ AAE+++K+L+ Sbjct 177 IQGEAHCQTFTVECHVENLDRTFVGVAGSRRKAEQVAAEQILKVLD 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Thiobacillus denitrificans ATCC 25259] Sequence ID: Q3SH50.1 Length: 226 Range 1: 9 to 208 Score:120 bits(301), Expect:2e-32, Method:Compositional matrix adjust., Identities:76/204(37%), Positives:113/204(55%), Gaps:12/204(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +L++ LGYTF LL++ALTH SY + E LEFLGD+++N + L P+ EG Sbjct 9 RLQQALGYTFSRSGLLQQALTHRSYGALNN-ERLEFLGDSVLNCSVARALYDAFPDLPEG 67 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 LS L+A L+ +E +A L L +R+ G++ +I+ D E+L+ AV++D Sbjct 68 SLSRLRANLVRQETLAEIAGALRLGDSLRLGEGELKSGGFRRPSILADALESLFGAVFLD 127 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 +G D + + +LF + +++ I KD KT LQEI Q R PEYRL+ EG Sbjct 128 AGFDE--AQRVVRRLF-DPLVAQIDPKASGKDPKTRLQEILQSRRLPLPEYRLVGTEGEA 184 Query 180 HKKKFIVEAKIKE--YRTLGEGKS 201 H + FIVE + + T G GKS Sbjct 185 HDQSFIVECLLAKPVLSTRGTGKS 208 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella pealeana ATCC 700345] Sequence ID: A8H1C7.1 Length: 225 Range 1: 4 to 223 Score:120 bits(300), Expect:2e-32, Method:Compositional matrix adjust., Identities:76/225(34%), Positives:128/225(56%), Gaps:13/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K + +L + LGY F +K+ L++ALTH S S K H E LEFLGD++++ I D L P Sbjct 4 IKNIPRLCRTLGYEFNEKAFLDQALTHRSASNK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + +A + +L ++++ G++ E+I+ D EA+ Sbjct 63 AATEGDLSRMRATLVCGKMLAEIAIEFKLGDYLKLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS D R+L ++ + + E +KD KT+LQE QK K P YR+ Sbjct 123 AIYLDS--DIENCRQLVLNWYESRL--KVIEPINQKDPKTLLQEYLQKYRKPLPVYRVAH 178 Query 175 VEGPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLL 217 EG H++ F VE +++ +G S+++AEQ AA ++++L+ Sbjct 179 TEGDAHEQTFTVECIVEDLSQAVVGVASSRRKAEQSAAAQVLELI 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella piezotolerans WP3] Sequence ID: B8CQJ5.1 Length: 225 Range 1: 4 to 223 Score:120 bits(300), Expect:2e-32, Method:Compositional matrix adjust., Identities:76/225(34%), Positives:130/225(57%), Gaps:13/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K + +L + LGY F +++LL++ALTH S S K H E LEFLGD++++ I D L P Sbjct 4 IKNIPRLCRTLGYEFAEQALLDQALTHRSASNK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + +A + +L ++++ G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVCGKMLAEIAIEFKLGDYLKLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS D R+L + + + E +KD KT+LQE QK K P Y+++ Sbjct 123 AIYLDS--DIEKCRKLVLNWYASRL--RVIEPINQKDPKTLLQEHLQKFRKPLPIYKVVH 178 Query 175 VEGPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLL 217 EG H++ F VE +++ R +G S+++AEQ AA ++++L+ Sbjct 179 TEGDAHEQTFTVECVVEDLRQAVVGVASSRRKAEQSAAAQVLELI 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Aliivibrio fischeri ES114] Sequence ID: Q5E314.1 Length: 223 Range 1: 5 to 216 Score:120 bits(300), Expect:2e-32, Method:Compositional matrix adjust., Identities:74/216(34%), Positives:122/216(56%), Gaps:12/216(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L++LEKK+GY FKD+S L+ ALTH S + H E LEFLGD++++F + D L P Sbjct 5 LQRLEKKIGYQFKDESFLKLALTHRS-ANGTHNERLEFLGDSILSFVVADDLYHRFPKVD 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ L ++ +L ++ + G++ ++I+ D EA+ A+Y Sbjct 64 EGDMSRMRATLVRGHTLAELGREFQLGDYLYLGPGELKSGGFRRDSILADAVEAIIGAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D R + + L +I+ G +KD KT LQE Q R K P Y + ++G Sbjct 124 LDS--DTETVRGIILSWYNTR-LESIEPGVSQKDPKTRLQEYLQGRRKPLPTYTVTKIKG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAE 211 H ++F +E + + +G+G S+++AEQ AA+ Sbjct 181 EAHNQEFTIECIVAGLDKPVIGKGSSRRKAEQSAAD 216 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella tularensis subsp. tularensis WY96-3418] Sequence ID: A4IWK9.1 Length: 230 Range 1: 12 to 223 Score:120 bits(300), Expect:2e-32, Method:Compositional matrix adjust., Identities:81/216(38%), Positives:133/216(61%), Gaps:11/216(5%) Query 11 LGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPL 70 LGY FKD +LL +ALTH S +KK +YE LEFLGD++++F I ++L + + EG LS L Sbjct 12 LGYNFKDCTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQL 70 Query 71 KAYLISEEFFNLLAQKLELHKFIRI----KRGKINETIIGDVFEALWAAVYIDSGRDANF 126 ++ L+ LA L++ ++I + + G E I+ DVFEA+ A+Y+DS D Sbjct 71 RSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDVFEAVIGAIYLDS--DFAT 128 Query 127 TRELFYKLFKEDILSAIKEGRVK-KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFI 185 +++ K + + I+S+I +K KD K+ LQEI + PEY + +++G H+++F Sbjct 129 VKKVILKWY-QPIISSINLDTIKVKDSKSKLQEILLQNALSLPEYSIETIDGKDHEQQFT 187 Query 186 VEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 V A K+ R +G S+K+AEQ+ AE++I++L + Sbjct 188 VVAVSKDLNLRVKAQGTSRKKAEQKTAEKMIEMLSQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella tularensis subsp. holarctica FTNF002-00] Sequence ID: A7NAR0.1 Length: 230 Range 1: 12 to 223 Score:120 bits(300), Expect:2e-32, Method:Compositional matrix adjust., Identities:81/216(38%), Positives:133/216(61%), Gaps:11/216(5%) Query 11 LGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPL 70 LGY FKD +LL +ALTH S +KK +YE LEFLGD++++F I ++L + + EG LS L Sbjct 12 LGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQL 70 Query 71 KAYLISEEFFNLLAQKLELHKFIRI----KRGKINETIIGDVFEALWAAVYIDSGRDANF 126 ++ L+ LA L++ ++I + + G E I+ DVFEA+ A+Y+DS D Sbjct 71 RSKLVKGTTLAQLASSLKMDEYIILGASEQGGNKREKILEDVFEAVIGAIYLDS--DFAT 128 Query 127 TRELFYKLFKEDILSAIKEGRVK-KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFI 185 +++ K + + I+S+I +K KD K+ LQEI + PEY + +++G H+++F Sbjct 129 VKKVILKWY-QPIISSINLDTIKVKDSKSKLQEILLQNALSLPEYSIETIDGKDHEQQFT 187 Query 186 VEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 V A K+ R +G S+K+AEQ+ AE++I++L + Sbjct 188 VVAVSKDLNLRVKAQGTSRKKAEQKTAEKMIEMLSQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ehrlichia canis str. Jake] Sequence ID: Q3YQX7.1 Length: 226 Range 1: 1 to 223 Score:119 bits(299), Expect:3e-32, Method:Compositional matrix adjust., Identities:79/228(35%), Positives:116/228(50%), Gaps:16/228(7%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE----HYETLEFLGDALVNFFIVDLLVQY 58 M+E + K + Y FK+ LL +ALTH S K+ +YE LEFLGDA++N I ++L Sbjct 1 MIETISKTIKYHFKNPQLLHEALTHPSIISKDSLKFNYERLEFLGDAVLNIVISEMLFNI 60 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEAL 112 P EG L+ K L+ +AQ + L +FI R G N + + EAL Sbjct 61 FPKDTEGNLAKKKTALVCGNQLVKVAQSINLGQFIIMSDGERTCGGANNHNNLENALEAL 120 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G A + + +K +AI +D KTILQE Q + P Y + Sbjct 121 IGAIYLDGGLTA--AQNFIHSFWKH---TAIHMDIPPQDAKTILQEFIQGKRLPAPTYHI 175 Query 173 ISVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLLEE 219 I GP H F VE +I Y+T+ G +KK AEQ+AA ++ +++ Sbjct 176 IDKSGPDHNPIFTVELRIPLYKTIQATGNNKKLAEQKAASLMLNQIKD 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xanthomonas campestris pv. campestris str. 8004] Sequence ID: Q4USF7.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xanthomonas campestris pv. campestris str. ATCC 33913] Sequence ID: Q8PB52.1 Length: 226 Range 1: 7 to 225 Score:119 bits(299), Expect:3e-32, Method:Compositional matrix adjust., Identities:78/223(35%), Positives:119/223(53%), Gaps:12/223(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 Q +G+ F D LL +AL H S + H E LEFLGD +VN I + L Q P EG Sbjct 7 QRGDPIGHAFADPGLLAQALRHRS-AGTPHNERLEFLGDGIVNLLIAEALYQRWPKADEG 65 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 L+ +A L+ E ++ + L L + + + G++ ++I+ D EA+ AA+Y+D Sbjct 66 ALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVAAIYLD 125 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 G + R + F E L+A+ G+ +KD KT LQE Q R P+Y LIS G Sbjct 126 CGFE--RCRAVVLPWF-EPSLAALPVGKAEKDPKTRLQEWLQARQLPLPQYALISESGDE 182 Query 180 HKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 H K+F V +++ R G+G S++ AEQ+AA +I L+ + Sbjct 183 HAKQFHVACILEQPAARAEGQGTSRRLAEQQAAATVIAQLDSN 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xylella fastidiosa M23] Sequence ID: B2I604.1 Length: 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xylella fastidiosa Temecula1] Sequence ID: Q87C06.1 Length: 227 Range 1: 10 to 226 Score:119 bits(299), Expect:3e-32, Method:Compositional matrix adjust., Identities:80/221(36%), Positives:119/221(53%), Gaps:12/221(5%) Query 8 EKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFL 67 ++++GY F D SLL +AL H S + H E LEFLGD++VN I + L Q P EG L Sbjct 10 QQRIGYVFTDPSLLLQALRHRS-AGTPHNERLEFLGDSVVNLLIAEALFQRWPRADEGAL 68 Query 68 SPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSG 121 + ++ L+ E +A+ ++L + + + G++ ++I+ D EA+ AA+Y+D+ Sbjct 69 TRARSELVRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVIAAIYLDA- 127 Query 122 RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHK 181 D R + F E L+A+ G+ +KD KT LQE Q R P Y LI G H Sbjct 128 -DLATCRTVVLPWF-ETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFESGDPHT 185 Query 182 KKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 K F V + E RT GEG S++ AEQ AA I L+ + Sbjct 186 KHFRVSCTLGELKLRTEGEGSSRRLAEQDAASHAIDQLDSN 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Dehalococcoides mccartyi CBDB1] Sequence ID: Q3ZXY9.1 Length: 237 Range 1: 1 to 230 Score:120 bits(300), Expect:3e-32, Method:Compositional matrix adjust., Identities:81/234(35%), Positives:122/234(52%), Gaps:18/234(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDL 54 M L +LE LG F+ SLLE+AL H S+ + E +EFLGDA++ D Sbjct 1 MLDLTELENSLGVKFEQPSLLEQALIHTSWVNENPNHSSGSNERMEFLGDAVLGVIFADR 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L P+ +EG L+ ++ L+ E +A + L K++ + R G+ + Sbjct 61 LYHDFPDIQEGDLTRFRSLLVRRESLVRVALGINLGKYLYLGRGEDVSKGRFKPANLAGA 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 FEA+ AA+YID G D TRE+ ++LFK + + ++ DYK+ LQE+ Q + + P Sbjct 121 FEAVLAAIYIDKGMDV--TREVIFRLFKTE-MERVQTLSSNIDYKSRLQELIQAQLQLTP 177 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLLEES 220 YR+ + GP H + FI E E R G G+SKKEAE AA+ ++ E S Sbjct 178 RYRITNFSGPEHNRLFIAEV-YAEDRVFAEGSGRSKKEAETNAAKVALQQFENS 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella loihica PV-4] Sequence ID: A3QBS7.1 Length: 225 Range 1: 4 to 220 Score:119 bits(299), Expect:3e-32, Method:Compositional matrix adjust., Identities:75/222(34%), Positives:127/222(57%), Gaps:13/222(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K L +L + LGY F+ +LLE+ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNLPRLGRILGYQFQQIALLEQALTHRSAASK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + +A++ +L ++++ G++ E+I+ D EA+ Sbjct 63 KATEGDLSRMRATLVCGKMLAEIAKEFKLGDYLKLGPGELKSGGFRRESILADAMEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+D+ D R L +K + A+ E +KD KT+LQE Q + P Y +++ Sbjct 123 AIYLDA--DIETCRTLVLNWYKSRL--AVIEPVNQKDPKTLLQEHLQGFKQPLPVYTVVN 178 Query 175 VEGPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELI 214 + G H + F VE K+++ + +G S+++AEQ AA E++ Sbjct 179 ISGEAHAQTFTVECKVEQLKEAVIGVANSRRKAEQIAAAEVL 220 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Syntrophotalea carbinolica DSM 2380] Sequence ID: Q3A4Q8.1 Length: 232 Range 1: 10 to 232 Score:119 bits(299), Expect:4e-32, Method:Compositional matrix adjust., Identities:74/226(33%), Positives:128/226(56%), Gaps:16/226(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYET------LEFLGDALVNFFIVDLLVQYSP 60 LE + Y F +++LL +ALTH S+S +++ T LEFLGDA++ + + + P Sbjct 10 LEDTIDYVFDNQALLLEALTHKSFSNEQNDRTEPDNERLEFLGDAVLGVVVSHYIFRTFP 69 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWA 114 + EG L+ +++ ++SE+ ++ + + L ++R+ +G + +++ + EAL Sbjct 70 HLPEGELTRIRSEVVSEKGLTVIGKAICLGDYMRLGKGEERSGGRQKSSLLANTMEALLG 129 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AV+ D G D+ R + LF I A + + DYKT LQE Q R+ + P+Y LI Sbjct 130 AVFCDGGFDS--VRRVIEALFIPHIQRAARR-KTGVDYKTRLQERLQARFGDVPQYVLIH 186 Query 175 VEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEE 219 +GP H++ + VEA + G+G+SKK AEQ AA++ ++ LEE Sbjct 187 ADGPPHQRSYSVEAHFRGSCIGQGQGRSKKSAEQAAAKQALEYLEE 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella tularensis subsp. mediasiatica FSC147] Sequence ID: B2SFY4.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella tularensis subsp. holarctica LVS] Sequence ID: Q2A4N2.1 Length: 230 Range 1: 12 to 223 Score:119 bits(298), Expect:4e-32, Method:Compositional matrix adjust., Identities:81/216(38%), Positives:133/216(61%), Gaps:11/216(5%) Query 11 LGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPL 70 LGY FKD +LL +ALTH S +KK +YE LEFLGD++++F I ++L + + EG LS L Sbjct 12 LGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQL 70 Query 71 KAYLISEEFFNLLAQKLELHKFIRI----KRGKINETIIGDVFEALWAAVYIDSGRDANF 126 ++ L+ LA L++ ++I + + G E I+ DVFEA+ A+Y+DS D Sbjct 71 RSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDVFEAVIGAIYLDS--DFAT 128 Query 127 TRELFYKLFKEDILSAIKEGRVK-KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFI 185 +++ K + + I+S+I +K KD K+ LQEI + PEY + +++G H+++F Sbjct 129 VKKVILKWY-QPIISSINLDTIKVKDSKSKLQEILLQNALSLPEYSIETIDGKDHEQQFT 187 Query 186 VEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 V A K+ R +G S+K+AEQ+ AE++I++L + Sbjct 188 VVAVSKDLNLRVKAQGTSRKKAEQKTAEKMIEMLSQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Cupriavidus taiwanensis LMG 19424] Sequence ID: B3R1Z9.1 Length: 256 Range 1: 3 to 206 Score:120 bits(300), Expect:4e-32, Method:Compositional matrix adjust., Identities:74/208(36%), Positives:116/208(55%), Gaps:12/208(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L+ L+++LGY F LL++ALTH S+S +H E LEFLGD+++N + D+L Sbjct 3 LDALQQRLGYRFSKPELLQQALTHRSHSA-QHNERLEFLGDSVLNCAVADMLYGMFGKLD 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ ++ +AQ L+L +R+ G++ +I+ D EA+ AV+ Sbjct 62 EGDLSRVRANLVKQQALYEIAQMLQLSDTLRLGEGELKSGGFRRPSILADALEAIVGAVF 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G DA R L KL+ IL + + KD KT+LQE Q P+Y +I+ G Sbjct 122 LDAGFDA--ARALIRKLYIP-ILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYNVIATHG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKK 203 H ++F VE + E R G G S++ Sbjct 179 AAHSQQFEVECTVPKLEVRVFGTGASRR 206 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella tularensis subsp. holarctica OSU18] Sequence ID: Q0BN07.1 Length: 230 Range 1: 12 to 223 Score:119 bits(298), Expect:4e-32, Method:Compositional matrix adjust., Identities:81/216(38%), Positives:133/216(61%), Gaps:11/216(5%) Query 11 LGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPL 70 LGY FKD +LL +ALTH S +KK +YE LEFLGD++++F I ++L + + EG LS L Sbjct 12 LGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQL 70 Query 71 KAYLISEEFFNLLAQKLELHKFIRI----KRGKINETIIGDVFEALWAAVYIDSGRDANF 126 ++ L+ LA L++ ++I + + G E I+ DVFEA+ A+Y+DS D Sbjct 71 RSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDVFEAVIGAIYLDS--DFAT 128 Query 127 TRELFYKLFKEDILSAIKEGRVK-KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFI 185 +++ K + + I+S+I +K KD K+ LQEI + PEY + +++G H+++F Sbjct 129 VKKVILKWY-QPIISSINLDTIKFKDSKSKLQEILLQNALSLPEYSIETIDGKDHEQQFT 187 Query 186 VEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 V A K+ R +G S+K+AEQ+ AE++I++L + Sbjct 188 VVAVSKDLNLRVKAQGTSRKKAEQKTAEKMIEMLSQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Clostridium acetobutylicum ATCC 824] Sequence ID: Q97IA4.1 Length: 230 Range 1: 13 to 230 Score:119 bits(298), Expect:5e-32, Method:Compositional matrix adjust., Identities:78/221(35%), Positives:124/221(56%), Gaps:14/221(6%) Query 10 KLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 KLG F++ +LL ALTH SY+ + E+ E LEFLGDA++ I + + P EG Sbjct 13 KLGIEFQNINLLVTALTHSSYANENKNAEYNERLEFLGDAVLQLSISEYFFKKYPTISEG 72 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWAAVYID 119 L+ +A ++ + + ++ +L K+IR+ G + +II D EA+ AA+Y+D Sbjct 73 ELTKKRALVVCGMSLHSIGERWQLGKYIRMSHGEELTGGRTRVSIIADCVEAVIAAIYLD 132 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 G D + + F+ I +A+ E ++ DYKT LQEI Q + K +Y L+ EGP Sbjct 133 KGFDT--AKNFILREFEGTIQNAV-ENKIILDYKTRLQEILQSKGKTDIKYTLVRHEGPP 189 Query 180 HKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 H++KF V + ++ GEG +KK+AEQ AA + +K L+ Sbjct 190 HRRKFFVNLNFDNDVKSTGEGYTKKDAEQDAACKALKGLDN 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Cupriavidus necator H16] Sequence ID: Q0K8N3.1 Length: 256 Range 1: 3 to 206 Score:120 bits(300), Expect:5e-32, Method:Compositional matrix adjust., Identities:74/208(36%), Positives:116/208(55%), Gaps:12/208(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L+ L+++LGY F LL++ALTH S+S +H E LEFLGD+++N + D+L Sbjct 3 LDALQQRLGYRFSKPELLQQALTHRSHSA-QHNERLEFLGDSVLNCAVADMLYGMFGKLD 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ ++ +AQ L+L +R+ G++ +I+ D EA+ AV+ Sbjct 62 EGDLSRVRANLVKQQALYEIAQMLQLSDTLRLGEGELKSGGFRRPSILADALEAIVGAVF 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G DA R L KL+ IL + + KD KT+LQE Q P+Y +I+ G Sbjct 122 LDAGFDA--ARALIRKLYIP-ILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYNVIATHG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKK 203 H ++F VE + E R G G S++ Sbjct 179 AAHSQQFEVECTVPKLEVRVFGTGASRR 206 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Desulfovibrio vulgaris str. Hildenborough] Sequence ID: Q72C44.1 Length: 253 Range 1: 26 to 252 Score:119 bits(299), Expect:5e-32, Method:Compositional matrix adjust., Identities:74/230(32%), Positives:129/230(56%), Gaps:15/230(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLL 55 +K +++L+K +G+ F D LL A+TH S++ + EH E LEFLGDA++ + + L Sbjct 26 VKPVDELQKTIGHRFGDMELLLTAMTHSSWANEQAVPVEHNERLEFLGDAVLELCVSEEL 85 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVF 109 + P+ REG L+ +++ L+S+ +A++L L +R+ +G+ ++ +++ D Sbjct 86 FRRFPSAREGDLTRMRSRLVSKPSLEGVARELRLDMSLRLGKGEESQGGRERGSLLSDAL 145 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 EA+ AV++D+G A + + ++ A+ R K DYK+ LQE+TQK +++RP Sbjct 146 EAMLGAVFLDAGYIA--AKGVVMRILGPHFPEALVPVRTK-DYKSQLQELTQKLFRDRPV 202 Query 170 YRLISVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLLE 218 Y L+ GP H K+F V + + G S K AEQ AA + L+ Sbjct 203 YTLLGSSGPEHDKQFDVRVVLPDGTVFEATGPSMKRAEQMAAARAVATLD 252 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Clostridium beijerinckii NCIMB 8052] Sequence ID: A6LSM2.1 Length: 232 Range 1: 6 to 228 Score:119 bits(297), Expect:6e-32, Method:Compositional matrix adjust., Identities:83/229(36%), Positives:126/229(55%), Gaps:20/229(8%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYS 59 L+++E+ LG F + +LL+ ALTH S+ + E+ E LEFLGD+++ I + L Sbjct 6 LKEIEENLGVFFNNHTLLKTALTHSSFGNQFKDAEYNERLEFLGDSVLQLCITEYLFNNY 65 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIG---------DVFE 110 +K EG L+ +++ ++ E +A+K+ L +IR+ +G E I G D E Sbjct 66 KHKTEGELTKIRSLIVCENSLYEIAKKINLGSYIRMSKG---EEITGGRERISIQADAVE 122 Query 111 ALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 A+ AAVY+D G F R+ F+E I AI + D+KT LQE+ QK + +Y Sbjct 123 AIIAAVYLDKG--IGFVRDFILLHFEEIINKAIN-NEIVLDFKTKLQELLQKDGEVVIQY 179 Query 171 RLISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEELIKLLE 218 L EGP H++KF I K+ G G SKKEAEQ AA++ + +LE Sbjct 180 ELTKFEGPPHRRKFFTNVVIDKKLMGEGSGYSKKEAEQNAAKQALDILE 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Delftia acidovorans SPH-1] Sequence ID: A9BNJ5.1 Length: 227 Range 1: 4 to 222 Score:118 bits(296), Expect:8e-32, Method:Compositional matrix adjust., Identities:78/224(35%), Positives:127/224(56%), Gaps:14/224(6%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 +L L+ +L + F + +LL++A+TH S+S ++ E LEFLGD+++N I LL Q + Sbjct 4 LLNALQLRLQHQFAEPALLQRAVTHRSFSA-DNNERLEFLGDSVLNLAISSLLYQRLSSM 62 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWAAV 116 EG LS ++A L+ E + +A +L+L +R+ GK +I+ D EAL AV Sbjct 63 PEGDLSRVRANLVKEGTLHQIALRLQLPDLLRLGEGESKSGGKQRPSILADAVEALIGAV 122 Query 117 YIDSGRDANFTRELFYKLFKE-DILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 Y+D+G A ++ + LF+ DI ++ +KD KT LQE Q R + P+Y +++ Sbjct 123 YLDAGYAAG--EKVVHHLFEGVDINPHMRA--AEKDAKTALQEWLQGRRMKLPQYEVVAT 178 Query 176 EGPHHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLL 217 G H++ F V I E + G G S++ AEQ AA +++LL Sbjct 179 TGAAHRQTFEVACAIAELQLQARGTGASRRAAEQTAATAMLELL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Cupriavidus metallidurans CH34] Sequence ID: Q1LKN1.1 Length: 256 Range 1: 3 to 206 Score:119 bits(298), Expect:8e-32, Method:Compositional matrix adjust., Identities:74/208(36%), Positives:116/208(55%), Gaps:12/208(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L+ L+++LGY F LL++ALTH S+S +H E LEFLGD+++N + D+L Sbjct 3 LDALQQRLGYRFSKPELLQQALTHRSHSA-QHNERLEFLGDSVLNCAVADMLFGMFGKLD 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ ++ +AQ L+L +R+ G++ +I+ D EA+ AV+ Sbjct 62 EGDLSRVRANLVKQQALYEIAQMLQLSDALRLGEGELKSGGFRRPSILADALEAIVGAVF 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G DA R L KL+ IL + + KD KT+LQE Q P+Y +I+ G Sbjct 122 LDAGFDA--ARALIRKLYIP-ILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYNVIATHG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKK 203 H ++F VE + E R G G S++ Sbjct 179 AAHSQQFEVECIVPKLEVRVFGTGASRR 206 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Symbiobacterium thermophilum IAM 14863] Sequence ID: Q67PF5.1 Length: 235 Range 1: 18 to 228 Score:119 bits(297), Expect:8e-32, Method:Compositional matrix adjust., Identities:81/219(37%), Positives:123/219(56%), Gaps:23/219(10%) Query 11 LGYTFKDKSLLEKALTHVSYSKKEH-----YETLEFLGDALVNFFIVDLLVQYSPNKREG 65 LGY F+D+SLL +ALTH +Y+ EH E LEFLGD+++ I L + P+ EG Sbjct 18 LGYEFRDESLLLEALTHTTYAN-EHPRARANERLEFLGDSVLGMVIAAHLYERYPDLPEG 76 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI-----NETIIGDVFEALWAAVYIDS 120 L+ ++A ++ E A+ L + + +R RG+ ++ + D FEA+ A+Y+D Sbjct 77 ELTKIRAAVVCEPSLAERARVLGIGRHMRFGRGEAVSGRDRDSTLSDAFEAVVGALYLDG 136 Query 121 GRDAN---FTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 G +A REL ++ A ++G V+ DYKT LQE Q++ P+YRL+ EG Sbjct 137 GLEAAQRFVLRELG------QLVEAARQGLVRVDYKTQLQEQLQRQGAAAPQYRLLVEEG 190 Query 178 PHHKKKFIVEAKIKEYRTLGE--GKSKKEAEQRAAEELI 214 P H ++F V E R LG G++KKEAEQ AA + + Sbjct 191 PAHLRRFQVGVYF-EGRLLGTGWGRNKKEAEQEAARQAL 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Campylobacter jejuni RM1221] Sequence ID: Q5HSF8.1 Length: 224 Range 1: 1 to 214 Score:118 bits(296), Expect:9e-32, Method:Compositional matrix adjust., Identities:82/218(38%), Positives:124/218(56%), Gaps:12/218(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MK +E+LE+ L Y FKDK+LL ALTH S+ K + E LEFLGDA+++ + + L Sbjct 1 MKNIEKLERSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGDAVLDLVVGEYLFHKFA 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 EG LS L+A L++E+ F +A L L FI + G+ +I+ D EA+ Sbjct 61 KDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSVAEENNGGREKPSILSDALEAIIG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+++++G + FT+ + +L +++ I + KDYKT LQEITQ + + P+Y + Sbjct 121 AIHLEAGFE--FTKTIALRLIEKN-FPQIDAKILIKDYKTKLQEITQGKIGQTPQYETVR 177 Query 175 VEGPHHKKKFIVEAKI--KEYRTLGEGKSKKEAEQRAA 210 GP H K+F + + KE G SKKEA+Q AA Sbjct 178 AFGPDHLKQFEIALMLDGKELARAIAG-SKKEAQQMAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella tularensis subsp. tularensis FSC198] Sequence ID: Q14G66.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella tularensis subsp. tularensis SCHU S4] Sequence ID: Q5NER3.1 Length: 230 Range 1: 12 to 223 Score:118 bits(296), Expect:9e-32, Method:Compositional matrix adjust., Identities:81/216(38%), Positives:133/216(61%), Gaps:11/216(5%) Query 11 LGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPL 70 LGY FKD +LL +ALTH S +KK +YE LEFLGD++++F I ++L + + EG LS L Sbjct 12 LGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFIDLAEGKLSQL 70 Query 71 KAYLISEEFFNLLAQKLELHKFIRI----KRGKINETIIGDVFEALWAAVYIDSGRDANF 126 ++ L+ LA L++ ++I + + G E I+ DVFEA+ A+Y+DS D Sbjct 71 RSKLVKGATLAQLASSLKMDEYIILGASEQGGHKREKILEDVFEAVIGAIYLDS--DFAT 128 Query 127 TRELFYKLFKEDILSAIKEGRVK-KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFI 185 +++ K + + I+S+I +K KD K+ LQEI + PEY + +++G H+++F Sbjct 129 VKKVILKWY-QPIISSINLDTIKVKDSKSKLQEILLQNALSLPEYSIETIDGKDHEQQFT 187 Query 186 VEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 V A K+ R +G S+K+AEQ+ AE++I++L + Sbjct 188 VVAVSKDLNLRVKAQGTSRKKAEQKTAEKMIEMLSQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Sequence ID: B8D7F5.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Sequence ID: B8D951.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Sequence ID: P57346.1 Length: 226 Range 1: 8 to 223 Score:118 bits(295), Expect:1e-31, Method:Compositional matrix adjust., Identities:82/221(37%), Positives:128/221(57%), Gaps:15/221(6%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +++K LGYTF K LL++ALTH S S K H E LEFLGD++++F I + L Q+ P EG Sbjct 8 KIQKVLGYTFTHKDLLKQALTHRSASSK-HNERLEFLGDSILSFVIANALYQHFPYIDEG 66 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 +S ++A L+ +A + +L +++++ +G++ E+I+ + EAL ++Y+D Sbjct 67 DMSRMRATLVRGNTLAEIAYEFDLGEYLKLGQGELKSGGFRRESILANTVEALIGSIYLD 126 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 S + EL K + E L I G +KD KT LQE Q + P Y ++ V G Sbjct 127 S--NIKTVEELILKWY-EKRLEKISPGDTQKDPKTRLQEYLQSKHLSLPLYFIVEVYGEA 183 Query 180 HKKKFIVEAK---IKEYRTLGEGKSKKEAEQRAAEE-LIKL 216 H + F + K I EY +G G S+++AEQ AA++ LIKL Sbjct 184 HNQLFTIHCKISTISEY-LIGTGSSRRKAEQDAAQKALIKL 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xanthomonas campestris pv. vesicatoria str. 85-10] Sequence ID: Q3BVV6.1 Length: 226 Range 1: 7 to 225 Score:117 bits(294), Expect:1e-31, Method:Compositional matrix adjust., Identities:78/223(35%), Positives:119/223(53%), Gaps:12/223(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 Q +G+ F D +LL +AL H S + H E LEFLGD +VN I + L Q P EG Sbjct 7 QRGDPIGHAFADPALLARALRHRS-AGTPHNERLEFLGDGIVNLLIAEALYQRWPKADEG 65 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 L+ +A L+ E ++ + L L + + + G++ ++I+ D EA+ AA+Y+D Sbjct 66 ALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVAAIYLD 125 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 G + R + F E L+A+ G+ +KD KT LQE Q R P Y LIS G Sbjct 126 CGFE--RCRAVVLPWF-EASLAALPVGKAEKDPKTRLQEWLQARQLPLPTYALISESGDE 182 Query 180 HKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 H K+F V +++ R G+G S++ AEQ+AA +I L+ + Sbjct 183 HAKQFHVACILEQPVARAEGQGTSRRLAEQQAATLVIAQLDSN 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Clostridium tetani E88] Sequence ID: Q895M9.1 Length: 235 Range 1: 7 to 229 Score:118 bits(295), Expect:1e-31, Method:Compositional matrix adjust., Identities:85/226(38%), Positives:128/226(56%), Gaps:14/226(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYS 59 L+ L+ K+ F++ LL ALTH SY+ + ++ E LEFLGD+++ I + L Sbjct 7 LKDLQNKIEIKFENIKLLHIALTHSSYANEKKRIQYNERLEFLGDSVLQLVITEYLFMNY 66 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALW 113 +K EG LS +A ++ E +A+ LEL ++I++ +G + +I+ D EAL Sbjct 67 KDKSEGELSKKRALIVCENSLFSIAKNLELGEYIKMSKGEELTGGRERISILADAVEALI 126 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 A++Y+D G D RE K F + A+K+ + DYKT LQEI QK + Y LI Sbjct 127 ASIYLDKGIDV--VREFILKNFYNIVEKAMKD-EIILDYKTKLQEIIQKDGDIQINYILI 183 Query 174 SVEGPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLLE 218 EGP H++KF E KIK+ G G SKKE+EQ AA++ I+ +E Sbjct 184 KHEGPPHRRKFYTEVKIKDNVLGYGIGYSKKESEQNAAKKAIENME 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Cupriavidus pinatubonensis JMP134] Sequence ID: Q46Z18.1 Length: 256 Range 1: 3 to 206 Score:118 bits(296), Expect:2e-31, Method:Compositional matrix adjust., Identities:73/208(35%), Positives:117/208(56%), Gaps:12/208(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L+ L+++LGY F LL++ALTH S+S +H E LEFLGD+++N + D+L Sbjct 3 LDALQQRLGYRFSKPELLQQALTHRSHSA-QHNERLEFLGDSVLNCAVADMLFGMFGKLD 61 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ ++ +AQ L+L + +R+ G++ +I+ D EA+ AV+ Sbjct 62 EGDLSRVRANLVKQQALYEIAQMLQLSEVLRLGEGELKSGGFRRPSILADALEAIVGAVF 121 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G +A R L KL+ IL + + KD KT+LQE Q P+Y +I+ G Sbjct 122 LDAGFEA--ARTLIRKLYIP-ILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYNVIATHG 178 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKK 203 H ++F VE + E R G G S++ Sbjct 179 AAHSQQFEVECMVPKLEVRVFGTGASRR 206 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819] Sequence ID: Q9PM40.1 Length: 224 Range 1: 1 to 214 Score:117 bits(293), Expect:2e-31, Method:Compositional matrix adjust., Identities:82/218(38%), Positives:123/218(56%), Gaps:12/218(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MK +E+LE+ L Y FKDK+LL ALTH S+ K + E LEFLGDA+++ + + L Sbjct 1 MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGDAVLDLVVGEYLFHKFA 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 EG LS L+A L++E+ F +A L L FI + GK +I+ D EA+ Sbjct 61 KDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAEENNGGKEKPSILSDALEAIIG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+++++G + F + + +L +++ I + KDYKT LQEITQ + + P+Y + Sbjct 121 AIHLEAGFE--FAKTIALRLIEKN-FPQIDAKILIKDYKTKLQEITQGKIGQTPQYETVR 177 Query 175 VEGPHHKKKFIVEAKI--KEYRTLGEGKSKKEAEQRAA 210 GP H K+F + + KE G SKKEA+Q AA Sbjct 178 AFGPDHLKQFEIALMLDGKELARAIAG-SKKEAQQMAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae P1031] Sequence ID: C1CKY7.1 Length: 232 Range 1: 1 to 224 Score:117 bits(294), Expect:2e-31, Method:Compositional matrix adjust., Identities:84/231(36%), Positives:126/231(54%), Gaps:24/231(10%) Query 1 MKMLEQ-LEKKLGYTFKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVD 53 MK L+ L+ F DK+LLE A TH SY+ K H E LEFLGDA++ I + Sbjct 1 MKELQTVLKNHFAIEFADKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L + P K EG LS L+A ++ EE A+ + ++FI++ + G+ +TI+GD Sbjct 61 YLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFNQFIKLGKGEEKSGGRNRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK--KDYKTILQEITQKRWK 165 FEA A+ +D +D +E Y++ I+ ++ G + DYKT LQE+ Q Sbjct 121 AFEAFLGALLLD--KDVAKVKEFIYQV----IIPKVEAGEFEMITDYKTHLQELLQVNGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELI 214 Y++IS GP H K F VE + E +++ G+G+SKK AEQ AA+ + Sbjct 175 VAIRYQVISETGPAHDKVFDVEVLV-EGKSIGQGQGRSKKLAEQEAAKNAV 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ehrlichia chaffeensis str. Arkansas] Sequence ID: Q2GFE4.1 Length: 226 Range 1: 1 to 219 Score:117 bits(293), Expect:2e-31, Method:Compositional matrix adjust., Identities:81/224(36%), Positives:114/224(50%), Gaps:16/224(7%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE----HYETLEFLGDALVNFFIVDLLVQY 58 M+E + K + Y FK+ LL +ALTH S K+ +YE LEFLGDA++N I ++L Sbjct 1 MIESISKIIKYNFKNPQLLNEALTHPSLVSKDTLKFNYERLEFLGDAVLNIVISEMLFNI 60 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGK-----INE-TIIGDVFEAL 112 P EG L+ K L+ +AQ + L +FI + G+ IN + + EAL Sbjct 61 FPKDTEGNLAKKKTALVCGNKLVEVAQSINLGQFIMMSDGERACGGINNFRNLENALEAL 120 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G A + F LF E SA +D KTILQE+ Q + P Y Sbjct 121 IGAIYLDGGFTA---AQDFIYLFWEH--SATHMNVPPQDAKTILQELVQGKRLPAPAYHT 175 Query 173 ISVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIK 215 I GP H F VE +I Y+ + G +KK AEQ+AA ++ Sbjct 176 IDKSGPDHNPTFTVEVRIPSYQAIQATGHNKKLAEQKAASLMLN 219 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Campylobacter jejuni subsp. jejuni 81116] Sequence ID: A8FNU7.1 Length: 224 Range 1: 1 to 214 Score:117 bits(292), Expect:3e-31, Method:Compositional matrix adjust., Identities:82/218(38%), Positives:123/218(56%), Gaps:12/218(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MK +E+LE+ L Y FKDK+LL ALTH S+ K + E LEFLGDA+++ + + L Sbjct 1 MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGDAVLDLVVGEYLFHKFA 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 EG LS L+A L++E+ F +A L L FI + GK +I+ D EA+ Sbjct 61 KDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSVAEENNGGKEKPSILSDALEAIIG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+++++G + F + + +L +++ I + KDYKT LQEITQ + + P+Y + Sbjct 121 AIHLEAGFE--FAKTIALRLIEKN-FPQIDAKILIKDYKTKLQEITQGKIGQTPQYETVR 177 Query 175 VEGPHHKKKFIVEAKI--KEYRTLGEGKSKKEAEQRAA 210 GP H K+F + + KE G SKKEA+Q AA Sbjct 178 AFGPDHLKQFEIALMLDGKELARAIAG-SKKEAQQMAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Myxococcus xanthus DK 1622] Sequence ID: Q1D5X9.1 Length: 260 Range 1: 19 to 241 Score:117 bits(294), Expect:3e-31, Method:Compositional matrix adjust., Identities:76/226(34%), Positives:123/226(54%), Gaps:16/226(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQYSP 60 LE +LG +F +ALTH +Y + + + LEFLGD++VN + L+ P Sbjct 19 LESRLGLSFSRMETALEALTHKTYVNETRDKELKDNQRLEFLGDSVVNLAVSHRLMARCP 78 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFEALWA 114 EG L+ ++A +++E+ +A+ + L + + G+ +++ D EA++ Sbjct 79 GLPEGDLTKMRARVVNEDGLARVARTIPLGDLLLLGRGELMSGGREKNSVLADALEAVFG 138 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 AV++ SG DA T L + F D+L + G+ + DYKT+LQE+ +R K +P YR++S Sbjct 139 AVFLTSGLDAAVT--LVDRYFA-DLLDEVSSGQGRLDYKTLLQEMAHERLKLQPRYRVVS 195 Query 175 VEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLEE 219 GP H K F VE + E G+SKKEAEQ AA+ ++ L E Sbjct 196 ESGPEHSKVFEVELMLGETAFARATGRSKKEAEQSAAQATLEKLRE 241 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Campylobacter jejuni subsp. doylei 269.97] Sequence ID: A7H5Y2.1 Length: 225 Range 1: 1 to 214 Score:116 bits(291), Expect:4e-31, Method:Compositional matrix adjust., Identities:82/218(38%), Positives:123/218(56%), Gaps:12/218(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 MK +E+LE+ L Y FKDK+LL ALTH S+ K + E LEFLGDA+++ + + L Sbjct 1 MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGDAVLDLVVGEYLFHKFT 60 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 EG LS L+A L++E+ F +A L L FI + GK +I+ D EA+ Sbjct 61 KDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSVAEENNGGKEKPSILSDALEAIIG 120 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+++++G + F + + +L +++ I + KDYKT LQEITQ + + P+Y + Sbjct 121 AIHLEAGFE--FAKTIALRLMEKN-FPQIDAKILIKDYKTKLQEITQGKIGQTPQYETVR 177 Query 175 VEGPHHKKKFIVEAKI--KEYRTLGEGKSKKEAEQRAA 210 GP H K+F + + KE G SKKEA+Q AA Sbjct 178 AFGPDHLKQFEIALMLDGKELARAIAG-SKKEAQQMAA 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Thermotoga petrophila RKU-1] Sequence ID: A5IN74.1 Length: 240 Range 1: 7 to 228 Score:117 bits(292), Expect:4e-31, Method:Compositional matrix adjust., Identities:79/231(34%), Positives:125/231(54%), Gaps:31/231(13%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK---------EHYETLEFLGDALVNFFIV 52 K++E+ +KK G FK++ LL +AL H SY+ + E E LEFLGDA++ F+ Sbjct 7 KIVEEFQKKTGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVC 66 Query 53 DLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIG 106 ++L + P G L+ K+ SEE +++++L L KF+ + + G+ ++I+ Sbjct 67 EILYKKYPEAEVGDLARAKSAAASEEVLAMVSRELNLGKFLFLGKGEEKTGGRDRDSILA 126 Query 107 DVFEALWAAVYIDSGRDANFTRELFYKL------FKEDILSAIKEGRVKKDYKTILQEIT 160 D FEAL AA+Y+D G ++K+ E + I G + DYKT LQEI Sbjct 127 DAFEALLAAIYLDQG---------YHKIKELFEEEFELYIEKIMRGEMLFDYKTALQEIV 177 Query 161 QKRWKERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAA 210 Q K PEY L+ E + F+VE ++ + +G G++KKEAE+ AA Sbjct 178 QSEHKVPPEYVLVRTEKNDGDRIFVVEVRVDGKSIAMGRGRTKKEAEKEAA 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella halifaxensis HAW-EB4] Sequence ID: B0TIV7.1 Length: 225 Range 1: 4 to 223 Score:116 bits(291), Expect:4e-31, Method:Compositional matrix adjust., Identities:74/225(33%), Positives:129/225(57%), Gaps:13/225(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K + +L + LGY F +++ L++ALTH S S K H E LEFLGD++++ I D L P Sbjct 4 IKNIPRLCRTLGYEFTEQAFLDQALTHRSASNK-HNERLEFLGDSILSIVISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + +A + +L ++++ G++ E+I+ D EA+ Sbjct 63 TATEGDLSRMRATLVCGKMLAEIAIEFKLGDYLKLGPGELKSGGFRRESILADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A+Y+DS + R L K ++ + + E +KD KT+LQE QK K P Y+++ Sbjct 123 AIYLDS--EIEKCRSLVLKWYESRL--KVIEPINQKDPKTLLQEHLQKFRKPLPVYKVVH 178 Query 175 VEGPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLL 217 EG H++ F VE +++ +G S+++AEQ AA ++++L+ Sbjct 179 TEGDAHEQTFTVECIVEDLSQAVVGVASSRRKAEQSAAAQVLELM 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus equi subsp. equi 4047] Sequence ID: C0M8Y3.1 Length: 230 Range 1: 1 to 229 Score:116 bits(291), Expect:5e-31, Method:Compositional matrix adjust., Identities:81/235(34%), Positives:123/235(52%), Gaps:22/235(9%) Query 1 MKMLEQL-EKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 MK LE L E F DK LLE A TH SY+ + H E LEFLGDA++ I + Sbjct 1 MKKLEALLENSFNIRFDDKRLLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLIISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L P + EG +S L++ ++ EE ++ +I++ R G+ +TI+GD Sbjct 61 YLFAKYPKQTEGDMSKLRSTIVREESLAGFSRYCSFDAYIKLGRGEEKSGGRHRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK--KDYKTILQEITQKRWK 165 +FEA A+ +D G E + + ++ +++G + KDYKT LQE+ Q + Sbjct 121 LFEAFLGALLLDKG------IEEVRRFLNQVMIPQVEQGTFEKVKDYKTCLQELLQAKGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLLEE 219 +Y++IS GP H K+F V + E + + G G+SKK AEQ AA+ + L E Sbjct 175 VVIDYQVISETGPAHAKQFEVAVLVGEDHLSKGTGRSKKLAEQDAAKNALAQLSE 229 >RecName: Full=Ribonuclease 3; AltName: Full=Antibiotic biosynthesis protein B; Short=AbsB; AltName: Full=Ribonuclease III; Short=RNase III [Streptomyces coelicolor A3(2)] Sequence ID: Q9ZBQ7.2 Length: 276 Range 1: 34 to 244 Score:117 bits(294), Expect:5e-31, Method:Compositional matrix adjust., Identities:84/217(39%), Positives:121/217(55%), Gaps:18/217(8%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSPNK 62 LE +LGY + +LL +ALTH SY+ + E LEFLGD+++ + D L + P+ Sbjct 34 LEGRLGYQL-ESALLVRALTHRSYAYENGGLPTNERLEFLGDSVLGLVVTDTLYRTHPDL 92 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKIN------ETIIGDVFEALWAAV 116 EG L+ L+A +++ + + LEL FIR+ RG+ +I+ D EA+ AV Sbjct 93 PEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEEGTGGRDKASILADTLEAVIGAV 152 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 Y+D G DA EL ++LF I + G D+KT LQE+T PEY L++ Sbjct 153 YLDQGLDA--ASELVHRLFDPLIEKSSNLG-AGLDWKTSLQELTATEGLGVPEY-LVTET 208 Query 177 GPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAE 211 GP H+K F A++ Y T G G+SKKEAEQ+AAE Sbjct 209 GPDHEKTFTAAARVGGVSYGT-GTGRSKKEAEQQAAE 244 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus equi subsp. zooepidemicus H70] Sequence ID: C0MCR4.1 Length: 230 Range 1: 1 to 229 Score:116 bits(291), Expect:5e-31, Method:Compositional matrix adjust., Identities:81/235(34%), Positives:123/235(52%), Gaps:22/235(9%) Query 1 MKMLEQL-EKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 MK LE L E F DK LLE A TH SY+ + H E LEFLGDA++ I + Sbjct 1 MKKLEALLENSFNIRFDDKRLLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLIISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L P + EG +S L++ ++ EE ++ +I++ + G+ +TI+GD Sbjct 61 YLFAKYPKQTEGDMSKLRSTIVREESLAGFSRYCSFDAYIKLGKGEEKSGGRHRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK--KDYKTILQEITQKRWK 165 +FEA A+ +D G E + + ++ +++G + KDYKT LQE+ Q + Sbjct 121 LFEAFLGALLLDKG------IEEVRRFLNQVMIPQVEQGTFEKVKDYKTCLQELLQAKGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLEE 219 +Y++IS GP H K+F V + E R + G G+SKK AEQ AA+ + L E Sbjct 175 VVIDYQVISETGPAHAKQFEVAVLVDEDRLSKGTGRSKKLAEQDAAKNALAQLSE 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Clostridium kluyveri DSM 555] Sequence ID: A5N807.1 Length: 244 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Clostridium kluyveri NBRC 12016] Sequence ID: B9E1G8.1 Length: 244 Range 1: 4 to 228 Score:117 bits(292), Expect:5e-31, Method:Compositional matrix adjust., Identities:79/228(35%), Positives:126/228(55%), Gaps:14/228(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLV 56 + E++EK L +F DK L++ ALTH SY+ + E +EFLGD+++ I + L Sbjct 4 VNFFEEVEKTLNISFNDKELIDTALTHSSYANGKKGVKFNERMEFLGDSVLQLCISEYLF 63 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFE 110 +K EG L+ ++ ++ E +A+K + K+I++ +G + +I+ + E Sbjct 64 LIYKSKSEGELTKKRSLIVCENSLYEVAKKWNIGKYIKMSKGEEITGGRERTSILANCVE 123 Query 111 ALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 A+ AA+YIDSG T++ FK+ I AIK ++ DYKT LQEI Q+ EY Sbjct 124 AIIAAIYIDSGYKK--TKQFIIDNFKDIIEKAIK-NQIVLDYKTNLQEIVQQDGDIHIEY 180 Query 171 RLISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEELIKLL 217 LI EGP H++KF + + G G +KKE+EQ AA++ +K L Sbjct 181 MLIKYEGPPHRRKFYTKVCVANNVMGSGVGYTKKESEQNAAQDALKKL 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xanthomonas oryzae pv. oryzae KACC 10331] Sequence ID: Q5H1R2.1 Length: 226 Range 1: 7 to 223 Score:116 bits(290), Expect:6e-31, Method:Compositional matrix adjust., Identities:77/221(35%), Positives:117/221(52%), Gaps:12/221(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 Q +G+ F D LL +AL H S + H E LEFLGD +VN + + L Q P EG Sbjct 7 QRGDPIGHAFADPDLLAQALRHRS-AGTPHNERLEFLGDGIVNLLVAEALYQRWPKADEG 65 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 L+ +A L+ E ++ + L L + + + G++ ++I+ D EA+ AA+Y+D Sbjct 66 ALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVAAIYLD 125 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 G + R + F E L+A+ G+ +KD KT LQE Q R P Y LIS G Sbjct 126 CGFE--RCRAVVLPWF-EASLAALPVGKAEKDPKTRLQEWLQARQLPLPNYALISESGDE 182 Query 180 HKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLE 218 H K+F V +++ R G+G S++ AEQ+AA +I L+ Sbjct 183 HAKQFHVACILEQPVARAEGQGTSRRLAEQQAATLVIAQLD 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Geobacter sulfurreducens PCA] Sequence ID: Q74AX1.1 Length: 248 Range 1: 17 to 240 Score:116 bits(291), Expect:8e-31, Method:Compositional matrix adjust., Identities:81/228(36%), Positives:124/228(54%), Gaps:18/228(7%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYET------LEFLGDALVNFFIVDLLVQY 58 E LE +GY F D+ L++ALTH S+ + T LEF GDA++ F I +L+++ Sbjct 17 EGLETSIGYRFTDRRFLDEALTHRSWLNEVRSPTVPDNERLEFFGDAILGFCIGKMLLRH 76 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEAL 112 P REG L+ +K+ L+ EE LA +EL ++R+ R G+ +++ + EAL Sbjct 77 YPESREGALARMKSALVGEETLADLAAAVELGSYLRLGRGEERSGGRHRRSLLANALEAL 136 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 AA+Y+D G E + L+ + G +D+KT QE+ Q ++ P Y L Sbjct 137 LAAMYLDGG---MAPVERLVDAWFGPRLAGVAAGIKGRDFKTDFQELAQAQYGGLPRYVL 193 Query 173 ISVEGPHHKKKFIVEAKIKEYRTLGE--GKSKKEAEQRAAEELIKLLE 218 + GP H +F V A + E R LG+ G+SKKEAEQ AA + ++ LE Sbjct 194 VDTSGPAHDLRFTVAAYVGE-RLLGQGTGRSKKEAEQAAARQCLERLE 240 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Buchnera aphidicola str. Sg (Schizaphis graminum)] Sequence ID: Q8K9R1.1 Length: 226 Range 1: 8 to 223 Score:115 bits(289), Expect:9e-31, Method:Compositional matrix adjust., Identities:77/220(35%), Positives:127/220(57%), Gaps:13/220(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 ++++ LGYTF + LL++ALTH S S K H E LEFLGD++++F I + L Q+ P EG Sbjct 8 KIQQILGYTFTHQELLKQALTHRSASSK-HNERLEFLGDSILSFVIANALYQHFPYIDEG 66 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 +S ++A L+ +A + +L +++++ +G++ E+I+ + EAL ++Y+D Sbjct 67 DMSRMRATLVRGNTLAEIAYEFDLGEYLQLGQGELKSGGFRRESILANTVEALIGSIYLD 126 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 S + EL K + E L I G +KD KT LQE Q + P Y ++ V G Sbjct 127 S--NIKTVEELILKWY-EKRLEKISPGDTQKDPKTRLQEYLQSKHLSLPSYFIVEVYGEA 183 Query 180 HKKKFIVEAKIKEYRT--LGEGKSKKEAEQRAAEE-LIKL 216 H + F + ++ T +G+G S+++AEQ AA + LIKL Sbjct 184 HNQLFTIHCEVSTLSTSFIGKGTSRRKAEQDAARKALIKL 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes MGAS315] Sequence ID: P0DF14.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes SSI-1] Sequence ID: P0DF15.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes serotype M1] Sequence ID: P66670.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes MGAS8232] Sequence ID: P66672.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes MGAS10750] Sequence ID: Q1J7V3.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes MGAS2096] Sequence ID: Q1JCZ9.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes MGAS9429] Sequence ID: Q1JMX4.1 Length: 230 Range 1: 1 to 229 Score:115 bits(289), Expect:9e-31, Method:Compositional matrix adjust., Identities:81/235(34%), Positives:123/235(52%), Gaps:22/235(9%) Query 1 MKMLEQL-EKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 MK LE+L F D +LLE A TH SY+ + H E LEFLGDA++ I + Sbjct 1 MKQLEELLSTSFDIQFNDLTLLETAFTHTSYANEHRLLNVSHNERLEFLGDAVLQLIISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L P K EG +S L++ ++ EE ++ +I++ + G+ +TI+GD Sbjct 61 YLFAKYPKKTEGDMSKLRSMIVREESLAGFSRFCSFDAYIKLGKGEEKSGGRRRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK--KDYKTILQEITQKRWK 165 +FEA A+ +D G DA + K+ ++ +++G + KDYKT LQE Q + Sbjct 121 LFEAFLGALLLDKGIDA------VRRFLKQVMIPQVEKGNFERVKDYKTCLQEFLQTKGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEE 219 +Y++IS +GP H K+F V + + G GKSKK AEQ AA+ + L E Sbjct 175 VAIDYQVISEKGPAHAKQFEVSIVVNGAVLSKGLGKSKKLAEQDAAKNALAQLSE 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus uberis 0140J] Sequence ID: B9DRH1.1 Length: 230 Range 1: 1 to 229 Score:115 bits(289), Expect:1e-30, Method:Compositional matrix adjust., Identities:84/236(36%), Positives:127/236(53%), Gaps:24/236(10%) Query 1 MKMLEQLEKK-LGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 MK LE L K F+DK+LLE A TH SY+ + H E LEFLGDA++ I + Sbjct 1 MKNLEALLKSSFAIEFEDKTLLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLIISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L + P+K EG LS ++ ++ EE ++ +I++ + G+ +TI+GD Sbjct 61 YLFKKYPHKAEGELSKQRSMIVREESLASFSRHCAFEPYIKLGKGEEKSGGRNRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWK 165 +FEA A+ +D G E + + ++ +++G +K DYKT LQEI Q + Sbjct 121 LFEAFLGALLLDKG------VEEVRRFLNQVMIPQVEKGNFEKVNDYKTSLQEILQAKGD 174 Query 166 ERPEYRLISVEGPHHKKKF--IVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 +Y++I+ GP H K+F +V A E + G G+SKK AEQ AAE +K L E Sbjct 175 TIIDYKVINESGPAHAKQFEVVVLANQVEL-SKGIGRSKKLAEQNAAENALKALSE 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Xanthomonas citri pv. citri str. 306] Sequence ID: Q8PMV0.1 Length: 226 Range 1: 7 to 225 Score:115 bits(288), Expect:1e-30, Method:Compositional matrix adjust., Identities:77/223(35%), Positives:118/223(52%), Gaps:12/223(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 Q +G+ F D +LL +AL H S + H E LEFLGD +VN I + L P EG Sbjct 7 QRGDPIGHAFADPALLAQALRHRS-AGTPHNERLEFLGDGIVNLLIAEALYHRWPKADEG 65 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 L+ +A L+ E ++ + L L + + + G++ ++I+ D EA+ AA+Y+D Sbjct 66 ALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVAAIYLD 125 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 G + R + F E L+A+ G+ +KD KT LQE Q R P Y LIS G Sbjct 126 CGFE--RCRAVVLPWF-EASLAALPVGKAEKDPKTRLQEWLQARQLPLPTYALISESGDE 182 Query 180 HKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES 220 H K+F V +++ R G+G S++ AEQ+AA +I L+ + Sbjct 183 HAKQFHVACILEQPVARAEGQGTSRRLAEQQAATLVIAQLDSN 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Sodalis glossinidius str. 'morsitans'] Sequence ID: Q2NS13.1 Length: 226 Range 1: 5 to 224 Score:115 bits(288), Expect:1e-30, Method:Compositional matrix adjust., Identities:81/224(36%), Positives:126/224(56%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 + +L+KKLGYTF+ LL +ALTH S S K H E LEFLGD+++++ I + L Q P Sbjct 5 LTNRLQKKLGYTFQQHDLLLQALTHRSASSK-HNERLEFLGDSILSYVIANALYQRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ EL + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAEMAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D +L ++ L I G +KD KT LQE Q R P Y+++ V Sbjct 124 FLDS--DIRTVEKLILDWYRSR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYQVVQVR 180 Query 177 GPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +KLLE Sbjct 181 GEAHDQEFTIHCQVSGLAQPVVGNGSSRRKAEQAAAEQALKLLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae Taiwan19F-14] Sequence ID: C1CR56.1 Length: 232 Range 1: 1 to 224 Score:115 bits(289), Expect:1e-30, Method:Compositional matrix adjust., Identities:83/229(36%), Positives:123/229(53%), Gaps:20/229(8%) Query 1 MKMLEQ-LEKKLGYTFKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVD 53 MK L+ L+ F DK+LLE A TH SY+ K H E LEFLGDA++ I + Sbjct 1 MKELQTVLKNHFAIEFTDKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L + P K EG LS L+A ++ EE A+ + +FI++ + G+ +TI+GD Sbjct 61 YLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKER 167 FEA A+ +D +D +E Y++ + + E + DYKT LQE+ Q Sbjct 121 AFEAFLGALLLD--KDVAKVKEFIYQVMIPKVEAG--EFEMITDYKTHLQELLQVNGDVA 176 Query 168 PEYRLISVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELI 214 Y++IS GP H K F VE + E +++ G+G+SKK AEQ AA+ + Sbjct 177 IRYQVISETGPAHDKVFDVEVLV-EGKSIGQGQGRSKKLAEQEAAKNAV 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae Hungary19A-6] Sequence ID: B1IC43.1 Length: 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae ATCC 700669] Sequence ID: B8ZJR8.1 Length: 232 Range 1: 1 to 224 Score:115 bits(289), Expect:1e-30, Method:Compositional matrix adjust., Identities:83/229(36%), Positives:123/229(53%), Gaps:20/229(8%) Query 1 MKMLEQ-LEKKLGYTFKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVD 53 MK L+ L+ F DK+LLE A TH SY+ K H E LEFLGDA++ I + Sbjct 1 MKELQTVLKNHFAIEFADKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L + P K EG LS L+A ++ EE A+ + +FI++ + G+ +TI+GD Sbjct 61 YLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKER 167 FEA A+ +D +D +E Y++ + + E + DYKT LQE+ Q Sbjct 121 AFEAFLGALLLD--KDVAKVKEFIYQVMIPKVEAG--EFEMITDYKTHLQELLQVNGDVA 176 Query 168 PEYRLISVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELI 214 Y++IS GP H K F VE + E +++ G+G+SKK AEQ AA+ + Sbjct 177 IRYQVISETGPAHDKVFDVEVLV-EGKSIGQGQGRSKKLAEQEAAKNAV 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Desulforamulus reducens MI-1] Sequence ID: A4J683.1 Length: 246 Range 1: 10 to 232 Score:115 bits(289), Expect:1e-30, Method:Compositional matrix adjust., Identities:75/227(33%), Positives:124/227(54%), Gaps:18/227(7%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLLVQYS 59 +L+ +LG+ + + +LL +ALTH S + H + LEFLGDA++ I + L + Sbjct 10 RLKTRLGFKWHNPTLLIQALTHSSCVHENRGHGLCHNQRLEFLGDAVLELIISEHLYKMF 69 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALW 113 P++ EG L+ ++A + E +A+ L+L + +R+ R G+ +I+ D FEAL Sbjct 70 PDRTEGELTKMRASSVCEPSLAKVARGLDLGRCLRMGRGEERSGGRERPSILADAFEALL 129 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 A+Y+D G + +R I+ + GR+ +DYKT LQEI Q+ + Y ++ Sbjct 130 GAIYLDQGLE--ISRHFVLNCLSS-IIDDVVAGRLDRDYKTELQEILQQSSPDPLTYTIM 186 Query 174 SVEGPHHKKKFIVEAKIKEYRTLGEGK--SKKEAEQRAAEELIKLLE 218 GP H K F I + + +G+G SKKEAEQ+AA++ + LE Sbjct 187 DESGPDHDKTFTA-GVIYKGKVIGKGSGHSKKEAEQQAAKDAFQHLE 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes str. Manfredo] Sequence ID: A2RFW8.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes NZ131] Sequence ID: B5XKB7.1 Length: 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes MGAS10394] Sequence ID: Q5XDA6.1 Length: 230 Range 1: 1 to 229 Score:115 bits(288), Expect:1e-30, Method:Compositional matrix adjust., Identities:81/235(34%), Positives:123/235(52%), Gaps:22/235(9%) Query 1 MKMLEQL-EKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 MK LE+L F D +LLE A TH SY+ + H E LEFLGDA++ I + Sbjct 1 MKQLEELLSTSFDIQFNDLTLLETAFTHTSYANEHRLLNVSHNERLEFLGDAVLQLIISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L P K EG +S L++ ++ EE ++ +I++ + G+ +TI+GD Sbjct 61 YLFAKYPKKTEGDMSKLRSMIVREESLAGFSRFCSFDAYIKLGKGEEKSGGRRRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK--KDYKTILQEITQKRWK 165 +FEA A+ +D G DA + K+ ++ +++G + KDYKT LQE Q + Sbjct 121 LFEAFLGALLLDKGIDA------VRRFLKQVMIPQVEKGNFERVKDYKTCLQEFLQTKGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEE 219 +Y++IS +GP H K+F V + + G GKSKK AEQ AA+ + L E Sbjct 175 VVIDYQVISEKGPAHAKQFEVSIVVNGAVLSKGLGKSKKLAEQDAAKNALAQLSE 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus thermophilus CNRZ1066] Sequence ID: Q5LZ68.1 Length: 237 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus thermophilus LMG 18311] Sequence ID: Q5M3S3.1 Length: 237 Range 1: 9 to 235 Score:115 bits(288), Expect:1e-30, Method:Compositional matrix adjust., Identities:83/234(35%), Positives:119/234(50%), Gaps:24/234(10%) Query 1 MKMLEQ-LEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 M LEQ LE+ G F K LLE A TH SY+ + H E LEFLGDA + I Sbjct 9 MNQLEQKLEQDFGIVFSQKDLLETAFTHTSYANEHRLLNISHNERLEFLGDAALQLVISV 68 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L PNK EG +S +++ ++ EE + ++IR+ + G+ TI+GD Sbjct 69 YLYNRYPNKPEGEMSKMRSTIVREESLAGFTKACGFEQYIRLGKGEEKSGGRERATILGD 128 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWK 165 ++EA A+Y+D G A K + ++ +++G + DYKT LQE Q K Sbjct 129 LWEAFLGALYLDQGLPA------VEKFLNQVMIPQVEKGNFDRVIDYKTALQERLQVNGK 182 Query 166 ERPEYRLISVEGPHHKKKFIVEAKI--KEYRTLGEGKSKKEAEQRAAEELIKLL 217 Y +I GP H K+F ++ + KE T G GKSKK AEQ AA+ ++ L Sbjct 183 VDITYTVIDESGPAHAKEFTMQVAVDGKELST-GLGKSKKLAEQAAAKSALEQL 235 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes MGAS10270] Sequence ID: Q1JI19.1 Length: 230 Range 1: 1 to 229 Score:115 bits(288), Expect:1e-30, Method:Compositional matrix adjust., Identities:81/235(34%), Positives:123/235(52%), Gaps:22/235(9%) Query 1 MKMLEQL-EKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 MK LE+L F D +LLE A TH SY+ + H E LEFLGDA++ I + Sbjct 1 MKQLEELLSTSFDIQFNDLTLLETAFTHTSYANEHRLLNVSHNERLEFLGDAVLQLIISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L P K EG +S L++ ++ EE ++ +I++ + G+ +TI+GD Sbjct 61 YLFAKYPKKTEGDMSKLRSMIVREESLAGFSRFCSFDAYIKLGKGEEKSGGRRRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK--KDYKTILQEITQKRWK 165 +FEA A+ +D G DA + K+ ++ +++G + KDYKT LQE Q + Sbjct 121 LFEAFLGALLLDKGIDA------VRRFLKQVMIPQVEKGNFERVKDYKTCLQEFLQAKGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEE 219 +Y++IS +GP H K+F V + + G GKSKK AEQ AA+ + L E Sbjct 175 VVIDYQVISEKGPAHAKQFEVSIVVNGAVLSKGLGKSKKLAEQDAAKNALAQLSE 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus thermophilus LMD-9] Sequence ID: Q03K17.1 Length: 229 Range 1: 1 to 227 Score:115 bits(288), Expect:1e-30, Method:Compositional matrix adjust., Identities:83/234(35%), Positives:119/234(50%), Gaps:24/234(10%) Query 1 MKMLEQ-LEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 M LEQ LE+ G F K LLE A TH SY+ + H E LEFLGDA + I Sbjct 1 MNQLEQKLEQDFGIVFSQKDLLETAFTHTSYANEHRLLNISHNERLEFLGDAALQLVISV 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L PNK EG +S +++ ++ EE + ++IR+ + G+ TI+GD Sbjct 61 YLYNRYPNKPEGEMSKMRSTIVREESLAGFTKACGFEQYIRLGKGEEKSGGRERATILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWK 165 ++EA A+Y+D G A K + ++ +++G + DYKT LQE Q K Sbjct 121 LWEAFLGALYLDQGLPA------VEKFLNQVMIPQVEKGNFDRVIDYKTALQERLQVNGK 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKI--KEYRTLGEGKSKKEAEQRAAEELIKLL 217 Y +I GP H K+F ++ + KE T G GKSKK AEQ AA+ ++ L Sbjct 175 VDITYTVIDESGPAHAKEFTMQVAVDGKELST-GFGKSKKLAEQAAAKSALEQL 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Aromatoleum aromaticum EbN1] Sequence ID: Q5P086.1 Length: 225 Range 1: 5 to 208 Score:115 bits(287), Expect:1e-30, Method:Compositional matrix adjust., Identities:67/208(32%), Positives:121/208(58%), Gaps:12/208(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L++L++ LG+ F + +LLE+ALTH S+ + + E LEFLGD+++N + L + + R Sbjct 5 LDRLQRSLGHRFDNPALLEQALTHRSFGQPNN-ERLEFLGDSILNCVVAIALFERFASLR 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S L+A L+ ++ + +A +L+L +++R+ G++ +I+ D EA++AA + Sbjct 64 EGEMSRLRASLVCQDGLHRVALELDLGEYLRLGEGEMKSGGFRRPSILADALEAVFAATF 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G A + + +L+ + +++AI G KD KT LQE+ Q R P Y + V G Sbjct 124 LDQGFAA--AKAVIDRLY-DPMIAAIDPGVAAKDPKTALQELLQGRKLPLPTYVMAKVHG 180 Query 178 PHHKKKF--IVEAKIKEYRTLGEGKSKK 203 H ++F + E RT G G +++ Sbjct 181 EAHAQEFEVVCEVNALNLRTTGRGTNRR 208 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Alcanivorax borkumensis SK2] Sequence ID: Q0VP19.1 Length: 228 Range 1: 5 to 225 Score:115 bits(287), Expect:2e-30, Method:Compositional matrix adjust., Identities:78/224(35%), Positives:121/224(54%), Gaps:11/224(4%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +L +LGY F+D SLLE ALTH S S+ +YE LEFLGDA + I L + P Sbjct 5 LNRLMARLGYQFQDLSLLELALTHRSVSRHRNYERLEFLGDAQLGQIISVALFEQFPEAA 64 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG L+ ++A L+ + L+A++L L +++ + G++ ++I+ D E++ A+ Sbjct 65 EGQLTRMRASLVRGQTLALVARELGLGEYLVLGGGELKSGGFRRDSILADALESIIGAML 124 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G RE+ F L AI +KD KT LQE Q R E P Y + VEG Sbjct 125 LDGGEPR--CREVVLAWFAPR-LDAISPQSAQKDAKTRLQEWLQARKFELPTYEVTQVEG 181 Query 178 PHHKKKFIVEAKIKEYRT--LGEGKSKKEAEQRAAEELIKLLEE 219 K+ F V+ + + + +G S+++AEQ AA ++ LE+ Sbjct 182 LAPKQTFDVQCSLDNVQQIFIAQGASRRKAEQEAASLALEWLEQ 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pyogenes MGAS6180] Sequence ID: Q48UR6.1 Length: 230 Range 1: 1 to 229 Score:115 bits(287), Expect:2e-30, Method:Compositional matrix adjust., Identities:80/235(34%), Positives:123/235(52%), Gaps:22/235(9%) Query 1 MKMLEQL-EKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 MK LE+L F D +LLE A TH SY+ + H E LEFLGDA++ I + Sbjct 1 MKQLEELLSTSFDIQFNDLTLLETAFTHTSYANEHRLLNVSHNERLEFLGDAVLQLIISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L P K EG +S L++ ++ EE ++ +I++ + G+ +TI+GD Sbjct 61 YLFAKYPKKTEGDMSKLRSMIVREESLAGFSRFCSFDAYIKLGKGEEKSGGRRRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK--KDYKTILQEITQKRWK 165 +FEA A+ +D G DA + K+ ++ +++G + +DYKT LQE Q + Sbjct 121 LFEAFLGALLLDKGIDA------VRRFLKQVMIPQVEKGNFERVRDYKTCLQEFLQTKGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEE 219 +Y++IS +GP H K+F V + + G GKSKK AEQ AA+ + L E Sbjct 175 VAIDYQVISEKGPAHAKQFEVSIVVNGAVLSKGLGKSKKLAEQDAAKNALAQLSE 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Proteus mirabilis HI4320] Sequence ID: B4F047.1 Length: 226 Range 1: 5 to 209 Score:115 bits(287), Expect:2e-30, Method:Compositional matrix adjust., Identities:75/209(36%), Positives:115/209(55%), Gaps:12/209(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ QL+KKLGYTFK LL +ALTH S S K H E LEFLGD+++++ I + L P Sbjct 5 LVNQLQKKLGYTFKQNELLLQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ LA++ EL + +R+ G++ E+I+ D EAL A+ Sbjct 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGAI 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D + K + E+ L+ I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQNIENIILKWY-ENRLAEISPGDKQKDPKTRLQEYLQGRHLPLPSYVVVQVR 180 Query 177 GPHHKKKFIVEAKIK--EYRTLGEGKSKK 203 G H ++F + +I + G G S++ Sbjct 181 GEAHDQEFTIHCQISGIDQPVKGMGTSRR 209 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Roseiflexus sp. RS-1] Sequence ID: A5V230.1 Length: 237 Range 1: 3 to 214 Score:115 bits(287), Expect:2e-30, Method:Compositional matrix adjust., Identities:72/216(33%), Positives:112/216(51%), Gaps:18/216(8%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK--------EHYETLEFLGDALVNFFIVD 53 K +++L +LG TF D+ LLE+ALTH S+ + + E LEFLGDA++NF Sbjct 3 KSVDELSARLGVTFSDQRLLEQALTHSSFLNEHVEERMHLDSNERLEFLGDAIINFLAAR 62 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGD 107 L+ + P+ EG L+ + LI E AQ+ L ++ + RG + + ++ D Sbjct 63 LVFERFPDAGEGELTAWRTALIRTETLAGFAQRYNLGAYVLLARGEESSGARQRQALLAD 122 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKER 167 FEA+ AA+++D G N R LF+ + L+++ + + DYK+ LQ Q + Sbjct 123 TFEAVIAALFLDQG--LNAVRTFLLPLFEAE-LASLPDRTLPVDYKSRLQARIQAERRVT 179 Query 168 PEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKK 203 P Y I GP H+ +F VE + E R LG GK Sbjct 180 PRYHEIDRSGPEHRPEFTVEVRAGEER-LGTGKGPS 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Candidatus Blochmannia pennsylvanicus str. BPEN] Sequence ID: Q492D1.1 Length: 229 Range 1: 2 to 227 Score:114 bits(286), Expect:2e-30, Method:Compositional matrix adjust., Identities:75/231(32%), Positives:127/231(54%), Gaps:17/231(7%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ L++KLGY F LL +ALTH S S +H E LEFLGDA++N+ I +LL P+ Sbjct 2 LVNALQEKLGYIFNRYDLLLQALTHRS-SSNQHNERLEFLGDAILNYVIANLLYHRFPHI 60 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ E LA++ L ++++ +G++ E+I+ + EAL + Sbjct 61 SEGGMSRMRANLVRENTLATLAREFNLGDYLQLGQGELKSGGYQRESILANTIEALIGGI 120 Query 117 YIDSGRDANFTREL----FYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 ++DS T E+ +YK+ + D + +KD KT LQE Q+R P Y + Sbjct 121 FLDSNIQ---TIEILIINWYKI-RIDHMDPYASYDTQKDPKTRLQEYMQRRRLPLPVYWI 176 Query 173 ISVEGPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLEESE 221 + G H + F + ++ E +G G S++ AEQ AA ++++ LE ++ Sbjct 177 NQIIGEAHNQIFTINCQVSELTQPIIGCGSSRRRAEQNAAAKVLEALEHNQ 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae CGSP14] Sequence ID: B2IPN5.1 Length: 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae 70585] Sequence ID: C1C7M6.1 Length: 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae JJA] Sequence ID: C1CEK4.1 Length: 232 Range 1: 16 to 224 Score:114 bits(286), Expect:3e-30, Method:Compositional matrix adjust., Identities:79/214(37%), Positives:116/214(54%), Gaps:19/214(8%) Query 15 FKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLS 68 F DK LLE A TH SY+ K H E LEFLGDA++ I + L + P K EG LS Sbjct 16 FTDKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLS 75 Query 69 PLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSGR 122 L+A ++ EE A+ + +FI++ + G+ +TI+GD FEA A+ +D + Sbjct 76 KLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGDAFEAFLGALLLD--K 133 Query 123 DANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKK 182 D +E Y++ + + E + DYKT LQE+ Q Y++IS GP H K Sbjct 134 DVAKVKEFIYQVMIPKVEAG--EFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDK 191 Query 183 KFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELI 214 F VE + E +++ G+G+SKK AEQ AA+ + Sbjct 192 VFDVEVLV-EGKSIGQGQGRSKKLAEQEAAKNAV 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus gordonii str. Challis substr. CH1] Sequence ID: A8AWC2.1 Length: 232 Range 1: 1 to 220 Score:114 bits(286), Expect:3e-30, Method:Compositional matrix adjust., Identities:80/227(35%), Positives:123/227(54%), Gaps:24/227(10%) Query 1 MKMLEQLE-KKLGYTFKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVD 53 MK LE L + G FKD SLLE A TH SY+ K H E LEFLGDA++ I + Sbjct 1 MKKLENLLFDRFGLVFKDVSLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLIISE 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L + P + EG L+ L++ ++ EE ++ + +FI++ + G+ ETI+GD Sbjct 61 YLFEKYPKRPEGDLTKLRSTIVREESLAGFSRDCQFDRFIKLGKGEEKSGGRERETILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWK 165 +FEA A+ +D G + + Y++ ++ ++ G ++ DYKT LQE+ Q Sbjct 121 LFEAFLGALLLDKGLEV--VKNFIYQV----MIPKVEAGDFEQVTDYKTKLQELLQSNGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAA 210 Y+++S GP H K F V + + R + G+G+SKK AEQ AA Sbjct 175 VEILYQVVSESGPAHAKNFEVSVSV-DGRLVGKGQGRSKKLAEQEAA 220 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae TIGR4] Sequence ID: Q97QG6.1 Length: 232 Range 1: 16 to 224 Score:114 bits(286), Expect:3e-30, Method:Compositional matrix adjust., Identities:79/214(37%), Positives:116/214(54%), Gaps:19/214(8%) Query 15 FKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLS 68 F DK LLE A TH SY+ K H E LEFLGDA++ I + L + P K EG LS Sbjct 16 FADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLS 75 Query 69 PLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSGR 122 L+A ++ EE A+ + +FI++ + G+ +TI+GD FEA A+ +D + Sbjct 76 KLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGDAFEAFLGALLLD--K 133 Query 123 DANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKK 182 D +E Y++ + + E + DYKT LQE+ Q Y++IS GP H K Sbjct 134 DVAKVKEFIYQVMIPKVEAG--EFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDK 191 Query 183 KFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELI 214 F VE + E +++ G+G+SKK AEQ AA+ + Sbjct 192 VFDVEVLV-EGKSIGQGQGRSKKLAEQEAAKNAV 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae G54] Sequence ID: B5E4Y2.1 Length: 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae D39] Sequence ID: Q04K72.1 Length: 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus pneumoniae R6] Sequence ID: Q8DPJ8.1 Length: 232 Range 1: 16 to 224 Score:114 bits(286), Expect:3e-30, Method:Compositional matrix adjust., Identities:79/214(37%), Positives:116/214(54%), Gaps:19/214(8%) Query 15 FKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLS 68 F DK LLE A TH SY+ K H E LEFLGDA++ I + L + P K EG LS Sbjct 16 FADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLS 75 Query 69 PLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSGR 122 L+A ++ EE A+ + +FI++ + G+ +TI+GD FEA A+ +D + Sbjct 76 KLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGDAFEAFLGALLLD--K 133 Query 123 DANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKK 182 D +E Y++ + + E + DYKT LQE+ Q Y++IS GP H K Sbjct 134 DVAKVKEFIYQVMIPKVEAG--EFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDK 191 Query 183 KFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELI 214 F VE + E +++ G+G+SKK AEQ AA+ + Sbjct 192 VFDVEVLV-EGKSIGQGQGRSKKLAEQEAAKNAV 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Vibrio vulnificus YJ016] Sequence ID: Q7MHN8.2 Length: 225 Range 1: 5 to 208 Score:114 bits(285), Expect:3e-30, Method:Compositional matrix adjust., Identities:73/208(35%), Positives:113/208(54%), Gaps:12/208(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +E+L ++LGY F+D LL ALTH S + K H E LEFLGD++++F I D L P Sbjct 5 IEKLTRQLGYQFQDDELLNLALTHRSANSK-HNERLEFLGDSILSFVIADELYHRFPKVN 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ L ++ L ++++ G++ ++I+ D EA+ AVY Sbjct 64 EGDMSRMRATLVRGNTLAELGREFGLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAVY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D R + + L AIK G +KD KT LQE Q R K P Y + +++G Sbjct 124 LDS--DLEVVRGIVLNWYASR-LEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKK 203 H ++F VE I + +G G S++ Sbjct 181 EAHNQEFTVECDIAGMDKPVVGRGTSRR 208 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Vibrio vulnificus CMCP6] Sequence ID: Q8DC76.1 Length: 225 Range 1: 5 to 208 Score:114 bits(285), Expect:3e-30, Method:Compositional matrix adjust., Identities:73/208(35%), Positives:113/208(54%), Gaps:12/208(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +E+L ++LGY F+D LL ALTH S + K H E LEFLGD++++F I D L P Sbjct 5 IEKLTRQLGYQFQDDELLNLALTHRSANSK-HNERLEFLGDSILSFVIADELYHRFPKVN 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ L ++ L ++++ G++ ++I+ D EA+ AVY Sbjct 64 EGDMSRMRATLVRGNTLAELGREFGLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAVY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D R + + L AIK G +KD KT LQE Q R K P Y + +++G Sbjct 124 LDS--DLEVVRGIVLNWYTSR-LEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG 180 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKK 203 H ++F VE I + +G G S++ Sbjct 181 EAHNQEFTVECDIAGMDKPVVGRGTSRR 208 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus sanguinis SK36] Sequence ID: A3CP46.1 Length: 232 Range 1: 8 to 220 Score:114 bits(285), Expect:3e-30, Method:Compositional matrix adjust., Identities:78/223(35%), Positives:120/223(53%), Gaps:25/223(11%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYS------KKEHYETLEFLGDALVNFFIVDLLV 56 +LEQ + F D++LLE A TH SY+ K H E LEFLGDA++ I + L Sbjct 8 LLEQFD----LVFSDETLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLIISEYLY 63 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFE 110 P + EG LS L++ ++ EE A+ + +FI++ R G+ +TI+GD+FE Sbjct 64 TKYPKRPEGDLSKLRSMIVREESLAGFARDCQFDQFIKLGRGEEKSGGRNRDTILGDLFE 123 Query 111 ALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERP 168 A A+ +D G +A + Y++ ++ ++ G ++ DYKT LQE+ Q Sbjct 124 AFLGALLLDKGVEA--VKSFLYQV----MIPKVEAGDFERVTDYKTKLQELLQINGDVEI 177 Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAA 210 Y+++S GP H K F V I ++ G+G+SKK AEQ AA Sbjct 178 AYQVVSETGPAHAKNFEVAVLINGRKSGQGQGRSKKLAEQEAA 220 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptomyces avermitilis MA-4680 = NBRC 14893] Sequence ID: Q82JT9.1 Length: 276 Range 1: 24 to 234 Score:115 bits(288), Expect:4e-30, Method:Compositional matrix adjust., Identities:83/217(38%), Positives:121/217(55%), Gaps:18/217(8%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSPNK 62 LE +LGY + +LL +ALTH SY+ + E LEFLGD+++ + D L + P+ Sbjct 24 LEGRLGYKL-ESALLVRALTHRSYAYENGGLPTNERLEFLGDSVLGLVVTDTLYRTHPDL 82 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKIN------ETIIGDVFEALWAAV 116 EG L+ L+A +++ + + LEL FIR+ RG+ +I+ D EA+ AV Sbjct 83 PEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEEGTGGRDKASILADTLEAVIGAV 142 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 Y+D G +A EL ++LF I + G D+KT LQE+T PEY L++ Sbjct 143 YLDQGLEA--AGELVHRLFDPLIEKSSNLG-AGLDWKTSLQELTATEGLGVPEY-LVTET 198 Query 177 GPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAE 211 GP H+K F A++ Y T G G+SKKEAEQ+AAE Sbjct 199 GPDHEKTFTAAARVGGVSYGT-GTGRSKKEAEQQAAE 234 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Francisella philomiragia subsp. philomiragia ATCC 25017] Sequence ID: B0TXH8.1 Length: 230 Range 1: 7 to 223 Score:114 bits(284), Expect:4e-30, Method:Compositional matrix adjust., Identities:80/221(36%), Positives:133/221(60%), Gaps:11/221(4%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +L K LGY+FK+ +LL +ALTH S +KK +YE LEFLGD+++ F I ++L P+ EG Sbjct 7 RLYKILGYSFKNYTLLVRALTHRSKTKK-NYERLEFLGDSILGFVIAEVLYMEFPDLAEG 65 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRI----KRGKINETIIGDVFEALWAAVYIDSG 121 LS +++ L+ LA +L ++I + + G E I+ DVFEA+ A+Y+DS Sbjct 66 KLSQIRSKLVKGVTLANLALNFKLDEYIILGASEQGGHKREKILEDVFEAIIGAIYLDS- 124 Query 122 RDANFTRELFYKLFKEDILSAIKEGRVK-KDYKTILQEITQKRWKERPEYRLISVEGPHH 180 D +++ +K ++S + VK KD K+ LQEI + PEY + +++G H Sbjct 125 -DFATVKKVIVNWYKP-VISTLNLDDVKVKDSKSKLQEILLQNGLSLPEYSIETIDGKDH 182 Query 181 KKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLEE 219 +++F V+A + +G S+K+AEQ+AAE++I++L + Sbjct 183 EQEFTVKALSNDLNIEVRAKGTSRKKAEQKAAEKMIQILSQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rhodopseudomonas palustris CGA009] Sequence ID: Q6N6C1.1 Length: 272 Range 1: 47 to 260 Score:114 bits(286), Expect:6e-30, Method:Compositional matrix adjust., Identities:74/221(33%), Positives:118/221(53%), Gaps:20/221(9%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYSPNK 62 +E++LG++F D SLL A THVS K + Y+ LEFLGD ++ + D+L + P+ Sbjct 47 IEQRLGHSFADPSLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFPDA 106 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAV 116 EG LS A L+ +E +A+ L+L + I++ K+ ++++GD+ EA+ A+ Sbjct 107 DEGELSKRLADLVRKETCADVARSLDLVEGIKLGTVGAGAGAKLRKSVLGDICEAVIGAI 166 Query 117 YIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 Y+D G +A +F R + + + K R +D KT+LQE Q R P YR + Sbjct 167 YLDGGYEAASDFVRRNWTERMR-------KPARSLRDPKTVLQEWAQARGLPTPVYREVE 219 Query 175 VEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELI 214 GPHH +F V + G G SK+ AE+ AA ++ Sbjct 220 RTGPHHDPQFRVAVILPGLEPAEGLGGSKRAAEKVAASAML 260 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rhodopirellula baltica SH 1] Sequence ID: Q7UGZ7.2 Length: 266 Range 1: 34 to 255 Score:114 bits(286), Expect:6e-30, Method:Compositional matrix adjust., Identities:72/225(32%), Positives:121/225(53%), Gaps:11/225(4%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKE--HYETLEFLGDALVNFFIVDLLVQYSPN 61 +E+ ++ LGY F+D LL ALTH S + E LEFLGD+++ + + L P Sbjct 34 IERCQEILGYDFRDLDLLRSALTHASGASHRLASNERLEFLGDSVLGLTVCEWLFNEYPE 93 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG-----KINETIIGDVFEALWAAV 116 EG L+ +K+ ++S +A KL L + + + RG ++++ DVFEA+ AA+ Sbjct 94 YSEGDLTKIKSAVVSRRSCGKVACKLGLDQCLIVGRGVTRNRSYPKSLVSDVFEAVIAAL 153 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 YID G + R+ E++ A+ + + ++K++LQ+ Q+ P Y+LI Sbjct 154 YIDGGPE--IVRDRLKLWLAEEVNLAV-DTQGSGNHKSVLQQFAQRELSATPVYKLIRET 210 Query 177 GPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLEES 220 GP H+K F++ A + + R G +KK+AEQRAA + L + Sbjct 211 GPDHRKMFLMGAMVDDRRFAPAWGNNKKDAEQRAAANALAELHNA 255 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Clostridium perfringens str. 13] Sequence ID: Q8XJN8.1 Length: 237 Range 1: 6 to 229 Score:114 bits(284), Expect:7e-30, Method:Compositional matrix adjust., Identities:79/227(35%), Positives:126/227(55%), Gaps:14/227(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYS 59 L ++EK +G F++K +L ALTH SY+ + ++ E LEFLGD+++ + L Sbjct 6 LIEVEKLIGIEFENKGVLITALTHSSYANQFKDVKYNERLEFLGDSVLQLCVTKYLFNNY 65 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALW 113 +K EG L+ ++A ++ E + +++ L L K+IR+ + G+ +I D EA+ Sbjct 66 KDKSEGELTKIRALVVCENSLHKVSKNLSLGKYIRMSKGEELTGGRERTSIQADALEAVI 125 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 AAVY+D G + + + FK+ I AI E + D+KT LQE+ QK + Y L+ Sbjct 126 AAVYLDKGIEV--ANDFILRNFKDVIDKAINE-EIILDFKTRLQEVLQKNGEVNIVYNLV 182 Query 174 SVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 EGP H++KF + I E G G SKKE+EQ AA+ ++ L E Sbjct 183 KHEGPPHRRKFFTDLLINNEIMGQGVGFSKKESEQNAAKAALQRLGE 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Enterobacter sp. 638] Sequence ID: A4WDD8.1 Length: 226 Range 1: 5 to 224 Score:113 bits(283), Expect:8e-30, Method:Compositional matrix adjust., Identities:78/224(35%), Positives:126/224(56%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF+ LL++ALTH S S K H E LEFLGD+++++ I + L P Sbjct 5 VINRLQRKLGYTFQHHELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ EL + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D +L ++ L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQTVEQLILNWYQTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +K+LE Sbjct 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKMLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Candidatus Pelagibacter ubique HTCC1062] Sequence ID: Q4FLS9.1 Length: 222 Range 1: 16 to 212 Score:112 bits(281), Expect:1e-29, Method:Compositional matrix adjust., Identities:75/202(37%), Positives:114/202(56%), Gaps:11/202(5%) Query 15 FKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYL 74 F D+ + K+LTH S+ + E +EFLGD ++ I L++ P+++EG L A L Sbjct 16 FSDQKIFIKSLTHKSFDSINNNEKIEFLGDRVLGLIIAKKLLELYPDEKEGVLDKKFASL 75 Query 75 ISEEFFNLLAQKLELHKFIRI-----KRGKINETIIGDVFEALWAAVYIDSGRDANFTRE 129 ++++ +A+K+EL K+I + K+ +I + I+ D EAL A+Y+D G NFT Sbjct 76 VNKKKCLEIAKKIELEKYILVLNPKNKKIEIEDKIVADCLEALIGAIYLDKG--LNFTER 133 Query 130 LFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAK 189 L+ E I +++ + D KT LQE + K +K P Y+LIS GP HK F V K Sbjct 134 FILNLWSEHITASV---ITQIDAKTKLQEYSLKIFKVLPIYKLISNTGPRHKPLFKVAVK 190 Query 190 IKEYRTL-GEGKSKKEAEQRAA 210 +K + EG SKK+AEQ AA Sbjct 191 LKNTKFFTAEGTSKKDAEQNAA 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Psychromonas ingrahamii 37] Sequence ID: A1SSM8.1 Length: 228 Range 1: 8 to 224 Score:112 bits(281), Expect:1e-29, Method:Compositional matrix adjust., Identities:73/221(33%), Positives:128/221(57%), Gaps:11/221(4%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L++LE+++ YTF D SLL++ALTH S + H E LEFLGD+++++ I L P Sbjct 8 LKRLERRVDYTFSDFSLLQQALTHRS-ALGNHNERLEFLGDSILSYAISTDLYARFPKVD 66 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG LS ++A L+ + + ++ +L + + G++ ++II D EA+ A + Sbjct 67 EGDLSRMRATLVCGKMLAEIGREFQLGDCLILGPGELKSGGFRRDSIIADGVEAIIGAAF 126 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D + ++L K F + L+ I+ G +KD KT LQE Q R + P Y ++ ++G Sbjct 127 LDS--DIDTVKKLILKWF-DSRLNTIEPGISQKDPKTRLQEHLQSRKQPLPIYEVLEIKG 183 Query 178 PHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLL 217 H ++F + I +++ G+G S+++AEQ AA +++ L Sbjct 184 EAHNQRFTMSCSIDGLKSVQGQGTSRRKAEQIAANKMLDSL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Listeria monocytogenes HCC23] Sequence ID: B8DDU8.1 Length: 229 Range 1: 1 to 226 Score:112 bits(281), Expect:1e-29, Method:Compositional matrix adjust., Identities:74/233(32%), Positives:118/233(50%), Gaps:23/233(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYET------LEFLGDALVNFFIVDL 54 M E+L++ +G+ FKD LL++A TH SY + E LEFLGDA++ + D Sbjct 1 MNQWEELQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDY 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L P+ EG ++ ++A ++ E A+ + K++R+ + G+ ++ DV Sbjct 61 LFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLGKGEEKAGGRTRPALLADV 120 Query 109 FEALWAAVYIDSGRDANFT---RELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWK 165 FE+ A+Y+D+G D T R +F K+ L + DYKT LQEI Q+ Sbjct 121 FESFIGALYLDNGIDKVVTFLERVIFPKIDAGAYLQTV-------DYKTQLQEIVQRDRD 173 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 EY ++ GP H K F + + + G G++KK+AEQ AA+ I L Sbjct 174 VLIEYDILGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSAAQFAINQL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus agalactiae A909] Sequence ID: Q3K1Y2.1 Length: 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus agalactiae 2603V/R] Sequence ID: Q8E0K7.2 Length: 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus agalactiae NEM316] Sequence ID: Q8E680.1 Length: 228 Range 1: 7 to 228 Score:112 bits(281), Expect:1e-29, Method:Compositional matrix adjust., Identities:76/229(33%), Positives:122/229(53%), Gaps:23/229(10%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQYS 59 +LEK G F ++ LL+ A TH SY+ + H E LEFLGDA++ I L Sbjct 7 KLEKDYGIVFANQELLDTAFTHTSYANEHRLLNISHNERLEFLGDAVLQLLISQYLFTKY 66 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALW 113 P K EG LS L++ ++ EE ++ +I++ + G+ +TI+GD+FEA Sbjct 67 PQKAEGDLSKLRSMIVREESLAGFSRLCGFDHYIKLGKGEEKSGGRNRDTILGDLFEAFL 126 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEG---RVKKDYKTILQEITQKRWKERPEY 170 A+ +D G E+ + + ++ +++G RV KDYKT LQE+ Q + +Y Sbjct 127 GALLLDKG------VEVVHAFVNKVMIPHVEKGTYERV-KDYKTSLQELLQSHGDVKIDY 179 Query 171 RLISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEELIKLLE 218 ++ + GP H K+F V + +E + G G+SKK AEQ AA+ + L+ Sbjct 180 QVTNESGPAHAKEFEVTVSVNQENLSQGIGRSKKAAEQDAAKNALATLQ 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Marinomonas sp. MWYL1] Sequence ID: A6VUP6.1 Length: 227 Range 1: 4 to 212 Score:112 bits(281), Expect:1e-29, Method:Compositional matrix adjust., Identities:73/213(34%), Positives:117/213(54%), Gaps:12/213(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 + ++L +++GY F D LLE ALTH S+ K + E LEFLGD+++N+ I + L P Sbjct 4 LYQKLSRRIGYFFADLGLLELALTHRSFGGKNN-ERLEFLGDSILNYVIAEDLFHRFPKA 62 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 +EG LS L+A L+ + LA++ EL ++++ G++ ++I+ D E + A+ Sbjct 63 KEGELSRLRASLVKGDTLAELAREFELGDYLKLGAGELKSGGFRRDSILADTVEGIIGAM 122 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 Y+D+G D R+ +KE L A V KD KT LQE Q R P+Y ++++ Sbjct 123 YLDAGMDV--CRQHILAWYKER-LDATSLKIVTKDAKTRLQEFLQARKHALPQYDVVNIV 179 Query 177 GPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQ 207 G H + F V I+ G+G S++ AEQ Sbjct 180 GEPHDQTFYVHCHIELCEEFIEGKGNSRRIAEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Erwinia tasmaniensis Et1/99] Sequence ID: B2VI46.1 Length: 226 Range 1: 5 to 209 Score:112 bits(280), Expect:2e-29, Method:Compositional matrix adjust., Identities:69/209(33%), Positives:113/209(54%), Gaps:12/209(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF + LL++ALTH S S K H E LEFLGD+++++ I + L Q P Sbjct 5 VINKLQRKLGYTFTHQELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYQRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ +L + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGYRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D +L + L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQAVEQLILSWYASR-LDQISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKK 203 G H ++F + ++ +G G S++ Sbjct 181 GEAHDQEFTIHCQVSGMAEPVVGTGSSRR 209 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Coxiella burnetii RSA 331] Sequence ID: A9N942.1 Length: 233 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Coxiella burnetii RSA 493] Sequence ID: P51837.2 Length: 233 Range 1: 1 to 223 Score:112 bits(280), Expect:2e-29, Method:Compositional matrix adjust., Identities:75/230(33%), Positives:125/230(54%), Gaps:17/230(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L +L ++LG+ F + LL+ ALTH S S ++ E LEFLGD+++ F I L Q P Sbjct 1 MNHLNKLMERLGHQFNNLELLKIALTHCS-SGADNNERLEFLGDSVLGFIIASELYQRRP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 REG LS ++A +++ + ++ KL +++++++ GK +I+ D EA+ Sbjct 60 QAREGDLSRMRASMVNGDELAQMSTKLGINEYLQLGVGEQKSGGKRRRSILADALEAIVG 119 Query 115 AVYIDSGRDANFTRELFYKLFKE--DILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+YID+G + R + E D LS + KKD K++LQE Q R P Y Sbjct 120 AIYIDAGLET--CRRCVLNWYGERVDDLSKLSP---KKDAKSLLQEWLQARRLPLPTYE- 173 Query 173 ISVEGPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLEES 220 + + G H + F V +K ++T G +++ AEQ AA+ ++LL++ Sbjct 174 VKITGEAHAQTFTVNCYVKGLPHKTEGVNTTRRRAEQIAAKRFLELLDDG 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Jannaschia sp. CCS1] Sequence ID: Q28V23.1 Length: 227 Range 1: 13 to 224 Score:112 bits(279), Expect:3e-29, Method:Compositional matrix adjust., Identities:69/217(32%), Positives:116/217(53%), Gaps:14/217(6%) Query 10 KLGYTFKDKSLLEKALTHVSYSKKEHYET--LEFLGDALVNFFIVDLLVQYSPNKREGFL 67 +LGY F+D +LL +ALTH S S + LEFLGD ++ + + ++ + +EG L Sbjct 13 RLGYVFEDPALLARALTHSSLSSPTRGDNQRLEFLGDRVLGLVMAEAVLAADTDAKEGTL 72 Query 68 SPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSG 121 +P L+ +E +A++++L +R+ + G+ ++GD EA+ AAVY+D G Sbjct 73 APRFNALVRKEACADVARQIDLGAAMRLGKSEMSAGGRRRMALLGDAMEAVIAAVYLDGG 132 Query 122 RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHK 181 + R+L +L+ E + S ++ R D KT LQE Q R P Y ++ GP H Sbjct 133 FAS--ARDLVLRLWSERVQSVEEDAR---DAKTALQEWAQARGMAPPTYTEVARSGPDHA 187 Query 182 KKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLL 217 F V + + K+K++AEQ+AA++L+ L Sbjct 188 PVFRVRVTLSSGENAEAQAKAKRQAEQQAAKDLLAQL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Sequence ID: B5BAT0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Sequence ID: B5QTU8.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Sequence ID: B5RD49.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Sequence ID: Q56056.2 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Sequence ID: Q5PIG5.1 Length: 226 Range 1: 5 to 224 Score:112 bits(279), Expect:3e-29, Method:Compositional matrix adjust., Identities:79/224(35%), Positives:125/224(55%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF + LL++ALTH S S K H E LEFLGD++++F I + L P Sbjct 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-HNERLEFLGDSILSFVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ LA++ +L + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS + +L +K L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--NIQTVEQLILNWYKTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Listeria welshimeri serovar 6b str. SLCC5334] Sequence ID: A0AJR0.1 Length: 229 Range 1: 1 to 226 Score:111 bits(278), Expect:3e-29, Method:Compositional matrix adjust., Identities:73/233(31%), Positives:119/233(51%), Gaps:23/233(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYET------LEFLGDALVNFFIVDL 54 M E+L++ +G+ F+D LL++A TH SY + E LEFLGDA++ + + Sbjct 1 MNQWEELQESVGFDFQDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSNY 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L P+ EG ++ ++A ++ E A+ + K+IR+ + G+ ++ DV Sbjct 61 LFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAIHFSKYIRLGKGEEKAGGRTRPALLADV 120 Query 109 FEALWAAVYIDSGRDANFT---RELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWK 165 FE+ A+Y+D+G D T R +F K+ + L + DYKT LQEI Q+ Sbjct 121 FESFIGALYLDNGIDKVVTFLERVIFPKIDAGEYLQTV-------DYKTQLQEIVQRDRD 173 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 EY ++ GP H K F + + + G G++KK+AEQ AA+ I L Sbjct 174 VLIEYDILGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSAAQFAINQL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli APEC O1] Sequence ID: A1AE97.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli O139:H28 str. E24377A] Sequence ID: A7ZQ11.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli HS] Sequence ID: A8A377.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli ATCC 8739] Sequence ID: B1IVR0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli SMS-3-5] Sequence ID: B1LP80.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli str. K-12 substr. DH10B] Sequence ID: B1XB41.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shigella boydii CDC 3083-94] Sequence ID: B2TXY0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli O157:H7 str. EC4115] Sequence ID: B5Z141.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli SE11] Sequence ID: B6I5E1.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli 55989] Sequence ID: B7LDG0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia fergusonii ATCC 35469] Sequence ID: B7LUZ7.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli IAI1] Sequence ID: B7M8I0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli S88] Sequence ID: B7MIQ2.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli ED1a] Sequence ID: B7MYJ8.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli UMN026] Sequence ID: B7N6F5.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli IAI39] Sequence ID: B7NRM0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli O127:H6 str. E2348/69] Sequence ID: B7UH07.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli BW2952] Sequence ID: C4ZYJ0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli K-12] Sequence ID: P0A7Y0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli CFT073] Sequence ID: P0A7Y1.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli O157:H7] Sequence ID: P0A7Y2.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shigella flexneri] Sequence ID: P0A7Y3.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shigella flexneri 5 str. 8401] Sequence ID: Q0T1T8.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli 536] Sequence ID: Q0TES1.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Escherichia coli UTI89] Sequence ID: Q1R8G6.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shigella boydii Sb227] Sequence ID: Q31XS0.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shigella dysenteriae Sd197] Sequence ID: Q32CV4.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shigella sonnei Ss046] Sequence ID: Q3YYU9.1 Length: 226 Range 1: 5 to 224 Score:111 bits(277), Expect:5e-29, Method:Compositional matrix adjust., Identities:79/224(35%), Positives:125/224(55%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF + LL++ALTH S S K H E LEFLGD+++++ I + L P Sbjct 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ LA++ EL + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D +L ++ L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQTVEKLILNWYQTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Wolbachia endosymbiont strain TRS of Brugia malayi] Sequence ID: Q5GTI3.1 Length: 243 Range 1: 16 to 240 Score:111 bits(278), Expect:5e-29, Method:Compositional matrix adjust., Identities:79/230(34%), Positives:124/230(53%), Gaps:18/230(7%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQY 58 + + K + Y FK+ ++LE+ALTH S +K+ E+YE LEFLGD+++N + +L + Sbjct 16 DTISKIINYRFKNDAILEEALTHPSLNKRNSKNQIENYERLEFLGDSILNMIVSAILFRL 75 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEAL 112 P ++EG L+ K L+ +A++++L FI R GK N + + EAL Sbjct 76 FPKEKEGALARRKTDLVCGNTIANVAKEIKLGNFIIMNNSERCNGGKRNLKNLENALEAL 135 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+YID G AN ++ K ++E + + +D KT LQE TQK PEY L Sbjct 136 IGAIYIDGGF-AN-VKKFVTKHWEERAKGMLS---LPQDPKTSLQEWTQKNKLPLPEYEL 190 Query 173 ISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLEESE 221 + GP H +F + I+ Y + SKK AEQ+AAE +++ + SE Sbjct 191 MKQTGPAHSPEFTISICIENYGKVFACASSKKVAEQKAAELMLEKINNSE 240 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Listeria monocytogenes serotype 4b str. CLIP 80459] Sequence ID: C1KWA4.1 Length: 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Listeria monocytogenes serotype 4b str. F2365] Sequence ID: Q71YL2.1 Length: 229 Range 1: 1 to 226 Score:111 bits(277), Expect:5e-29, Method:Compositional matrix adjust., Identities:73/233(31%), Positives:118/233(50%), Gaps:23/233(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYET------LEFLGDALVNFFIVDL 54 M E+L++ +G+ FKD LL++A TH SY + E LEFLGDA++ + + Sbjct 1 MNQWEELQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSNY 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L P+ EG ++ ++A ++ E A+ + K++R+ + G+ ++ DV Sbjct 61 LFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLGKGEEKAGGRTRPALLADV 120 Query 109 FEALWAAVYIDSGRDANFT---RELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWK 165 FE+ A+Y+D+G D T R +F K+ L + DYKT LQEI Q+ Sbjct 121 FESFIGALYLDNGIDKVVTFLERVIFPKIDAGAYLQTV-------DYKTQLQEIVQRDRD 173 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 EY ++ GP H K F + + + G G++KK+AEQ AA+ I L Sbjct 174 VLIEYDILGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSAAQFAINQL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Thermobifida fusca YX] Sequence ID: Q47S78.1 Length: 240 Range 1: 25 to 229 Score:111 bits(278), Expect:6e-29, Method:Compositional matrix adjust., Identities:75/210(36%), Positives:116/210(55%), Gaps:17/210(8%) Query 20 LLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLI 75 +L +ALTH SY+ + E LEFLGD+++ + D L + P+ EG L+ L+A ++ Sbjct 25 ILTRALTHRSYAYENGGLPTNERLEFLGDSVLGLVVTDTLYRTHPDLSEGQLAKLRAAVV 84 Query 76 SEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSGRDANFTRE 129 + +A++L + +++R+ R G+ +I+ D EAL AVY+D G D E Sbjct 85 NMRALADVARELGIGRYVRLGRGEEATGGRDKSSILADTLEALIGAVYLDRGLDE--ASE 142 Query 130 LFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAK 189 L ++LF I A G D+KT LQE+T PEY ++ GP H+K F + Sbjct 143 LVHRLFDPLIARASGLG-AGLDWKTSLQELTAAELLGVPEY-VVEESGPDHQKTFRATVR 200 Query 190 I--KEYRTLGEGKSKKEAEQRAAEELIKLL 217 + + Y + GEG+SKKEAEQ+AAE K + Sbjct 201 VAGQTYGS-GEGRSKKEAEQQAAESAWKAI 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Sequence ID: A6TCI1.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Klebsiella pneumoniae 342] Sequence ID: B5XNH0.1 Length: 226 Range 1: 5 to 224 Score:111 bits(277), Expect:6e-29, Method:Compositional matrix adjust., Identities:79/224(35%), Positives:124/224(55%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF + LL++ALTH S S K H E LEFLGD++++F I + L P Sbjct 5 VINRLQRKLGYTFHHQELLQQALTHRSASSK-HNERLEFLGDSILSFVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ EL + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D L ++ L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQNVERLILSWYQTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ehrlichia ruminantium str. Welgevonden] Sequence ID: Q5HA74.1 Length: 227 Range 1: 2 to 219 Score:110 bits(276), Expect:6e-29, Method:Compositional matrix adjust., Identities:77/223(35%), Positives:110/223(49%), Gaps:16/223(7%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQY 58 + + K + Y FK+ LL +ALTH S K++ YE LEFLGDA++N I ++L Sbjct 2 ITNAISKIIKYDFKNTQLLNEALTHPSVLSKDNNNFNYERLEFLGDAVLNLVISEMLFNI 61 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEAL 112 P EG L+ K L+ +AQ + L FI R G N + + EAL Sbjct 62 FPYDTEGNLAKKKTALVCGTKLVEIAQSINLGIFIIMSDGERSCGGANNSNNLENALEAL 121 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G A ++ + +K SA +D KTILQE Q + P Y + Sbjct 122 IGAIYLDGGLKA--AKDFIFLFWKN---SATHMKVPPQDAKTILQEWAQSKGFPAPSYHI 176 Query 173 ISVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELI 214 I+ GP H F VE +I + TL G +KK AEQ+AA ++ Sbjct 177 INKSGPDHNPCFTVEVRINSHETLHATGHNKKLAEQKAASLML 219 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Anaplasma marginale str. St. Maries] Sequence ID: Q5P9U8.1 Length: 232 Range 1: 18 to 230 Score:111 bits(277), Expect:7e-29, Method:Compositional matrix adjust., Identities:79/219(36%), Positives:115/219(52%), Gaps:17/219(7%) Query 12 GYTFKDKSLLEKALTH--VSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSP 69 GY F+D LL +ALTH +SY +YE LEFLGDA+++ + ++L + P+ EG L+ Sbjct 18 GYQFRDLDLLLEALTHPRLSYKSAANYERLEFLGDAVLSMTVSEMLYRLFPDDDEGCLTR 77 Query 70 LKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEALWAAVYIDSGRD 123 + L+ +A+ + L + I R G N + + EAL A+Y+D G + Sbjct 78 KRTALVRGSEVVEIARSIGLGELILMSGGERTCGGSDNPGTLENALEALIGAMYMDGGPE 137 Query 124 ANFTRELFYK--LFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHK 181 A R +K L + +S +D KT LQE Q R P Y+L+S GP HK Sbjct 138 A--YRSFIHKHWLARAQHMSYTP----PQDPKTALQEWVQGRGWAMPLYKLVSKSGPEHK 191 Query 182 KKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLEE 219 F VE I+E+ LG G SKK AEQ AA+ ++K + E Sbjct 192 PVFAVEVSIQEHGNVLGTGSSKKLAEQEAAKLMLKKITE 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Geobacillus thermodenitrificans NG80-2] Sequence ID: A4IM67.1 Length: 246 Range 1: 18 to 244 Score:111 bits(277), Expect:7e-29, Method:Compositional matrix adjust., Identities:72/233(31%), Positives:120/233(51%), Gaps:21/233(9%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQ 57 ++L+KK+G TF+++ LL +A TH SY + E E LEFLGDA++ + L Q Sbjct 18 FQELQKKIGITFQNEKLLIQAFTHSSYVNEHRRRFHEDNERLEFLGDAVLELTVSQYLFQ 77 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEA 111 P+ EG L+ L+A ++ E A L + + + + G+ ++ DVFEA Sbjct 78 KFPHMSEGQLTKLRAAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEA 137 Query 112 LWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPE 169 A+Y+D G D + + + + I EG D+K+ LQE+ Q+ E Sbjct 138 FIGALYLDQGMD------VVLRFLGQTMFPKIDEGAFSHVMDFKSQLQELVQRDGSGTLE 191 Query 170 YRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEESE 221 Y ++ +GP H K+F+ + + +G G+SKKEAEQ AA+ ++ L ++ Sbjct 192 YAILEEKGPAHNKEFVARVALNGQELGVGVGRSKKEAEQHAAQMALETLRAAD 244 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Aster yellows witches'-broom phytoplasma AYWB] Sequence ID: Q2NJY3.1 Length: 237 Range 1: 1 to 217 Score:111 bits(277), Expect:7e-29, Method:Compositional matrix adjust., Identities:80/226(35%), Positives:126/226(55%), Gaps:21/226(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSK-----KEHYETLEFLGDALVNFFIVDLL 55 MK ++ L + L K+ L ++ALTH SYS +E E LEFLGDA+V + D L Sbjct 1 MKNIQILFQTLNIFPKNLVLYKQALTHSSYSNEQTPPQEDNERLEFLGDAIVGLLMADYL 60 Query 56 VQYSPNKR-EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINET-----IIGDVF 109 YS +K EG ++ +A + E+ + AQK+EL ++ + +G+ N+ I+ D F Sbjct 61 --YSQSKEDEGIMTKKRAQAVCEKSLTIYAQKIELQNYLLLGKGEKNKDFNAKGIMADTF 118 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 EAL+ A+Y+D G T + K+F +L + + D+KT LQEI Q K+ + Sbjct 119 EALFGAIYLDLGY---LTAK---KVFHNIVLPHLAKTIYIIDFKTQLQEIVQSE-KKTIQ 171 Query 170 YRLISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEELI 214 Y+++ +GP H K F+ E + K GEG +KK AEQ+AA++ + Sbjct 172 YKIVQEQGPAHSKNFVAEVYLEKNLLGTGEGSTKKSAEQKAAQQAL 217 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Anaplasma marginale str. Florida] Sequence ID: B9KGT5.1 Length: 232 Range 1: 18 to 230 Score:110 bits(276), Expect:8e-29, Method:Compositional matrix adjust., Identities:79/219(36%), Positives:115/219(52%), Gaps:17/219(7%) Query 12 GYTFKDKSLLEKALTH--VSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSP 69 GY F+D LL +ALTH +SY +YE LEFLGDA+++ + ++L + P+ EG L+ Sbjct 18 GYQFRDLDLLLEALTHPSLSYKSAANYERLEFLGDAVLSMTVSEMLYRLFPDDDEGCLTR 77 Query 70 LKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEALWAAVYIDSGRD 123 + L+ +A+ + L + I R G N + + EAL A+Y+D G + Sbjct 78 KRTALVRGSEVVEIARSIGLGELILMSGGERTCGGSDNPGTLENALEALIGAMYMDGGPE 137 Query 124 ANFTRELFYK--LFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHK 181 A R +K L + +S +D KT LQE Q R P Y+L+S GP HK Sbjct 138 A--YRSFIHKHWLARAQHMSYTP----PQDPKTALQEWVQGRGWAMPLYKLVSKSGPEHK 191 Query 182 KKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLEE 219 F VE I+E+ LG G SKK AEQ AA+ ++K + E Sbjct 192 PVFAVEVSIQEHGNVLGTGSSKKLAEQEAAKLMLKKITE 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Geobacillus kaustophilus HTA426] Sequence ID: Q5L0Q3.1 Length: 246 Range 1: 19 to 244 Score:111 bits(277), Expect:8e-29, Method:Compositional matrix adjust., Identities:72/232(31%), Positives:120/232(51%), Gaps:21/232(9%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQY 58 ++L+ K+G TF+++ LL +A TH SY + E E LEFLGDA++ + L Q Sbjct 19 QELQNKIGITFRNEKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQK 78 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEAL 112 P+ EG L+ L+A ++ E A L + + + + G+ ++ DVFEA Sbjct 79 FPHMSEGQLTKLRAAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEAF 138 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEY 170 A+Y+D G DA + ++ + I EG D+K+ LQE+ Q+ EY Sbjct 139 IGALYLDQGMDA------VIRFLEKTMFPKIDEGAFSHVMDFKSQLQELVQRDGSGTLEY 192 Query 171 RLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEESE 221 ++ +GP H K+F+ + + +G G+SKKEAEQ AA+ ++ L ++ Sbjct 193 AILEEKGPAHNKEFVARVALNGQELGIGVGRSKKEAEQHAAQMALETLRAAD 244 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Sequence ID: P59476.1 Length: 226 Range 1: 5 to 223 Score:110 bits(276), Expect:8e-29, Method:Compositional matrix adjust., Identities:77/223(35%), Positives:127/223(56%), Gaps:13/223(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++++L+K LGYTF K LL +ALTH S + K H E LEFLGD++++F I + L P+ Sbjct 5 VIQKLQKILGYTFIKKDLLIQALTHRSANSK-HNERLEFLGDSILSFVIANALYHCFPHV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A + +L ++++ +G++ E+I+ + EAL ++ Sbjct 64 NEGDMSRMRATLVRGHTLAKIAYEFDLGDYLQLGQGELKSGGFRRESILANTVEALIGSI 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS + +L K +K + L AI +KD KT LQE Q + P Y + V Sbjct 124 FLDS--NLKTIEKLILKWYK-NRLKAINPSDTQKDPKTRLQEYLQSKHLPLPSYLVEQVY 180 Query 177 GPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEE-LIKL 216 G H + F + +I +T+G G S+++AEQ AA+ LIKL Sbjct 181 GEAHNQLFTIYCEISGINEKTIGIGSSRRKAEQEAAQNALIKL 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Listeria monocytogenes EGD-e] Sequence ID: Q8Y691.1 Length: 229 Range 1: 1 to 226 Score:110 bits(276), Expect:9e-29, Method:Compositional matrix adjust., Identities:73/233(31%), Positives:118/233(50%), Gaps:23/233(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYET------LEFLGDALVNFFIVDL 54 M E+L++ +G+ FK+ LL++A TH SY + E LEFLGDA++ + D Sbjct 1 MNQWEELQESVGFDFKNVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDY 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L P+ EG ++ ++A ++ E A+ + K++R+ + G+ ++ DV Sbjct 61 LFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLGKGEEKAGGRTRPALLADV 120 Query 109 FEALWAAVYIDSGRDANFT---RELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWK 165 FE+ A+Y+D+G D T R +F K+ L + DYKT LQEI Q+ Sbjct 121 FESFIGALYLDNGIDKVVTFLERVIFPKIDAGAYLQTV-------DYKTQLQEIVQRDRD 173 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 EY ++ GP H K F + + + G G++KK+AEQ AA+ I L Sbjct 174 VLIEYDILGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSAAQFAINKL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Treponema pallidum subsp. pallidum SS14] Sequence ID: B2S448.1 Length: 254 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Treponema pallidum subsp. pallidum str. Nichols] Sequence ID: O83787.1 Length: 254 Range 1: 24 to 241 Score:111 bits(277), Expect:9e-29, Method:Compositional matrix adjust., Identities:72/221(33%), Positives:118/221(53%), Gaps:17/221(7%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVS-YSKKE------HYETLEFLGDALVNFFIVDLLV 56 L +L++ LG F+D + L++AL+H S +S KE H E +EFLGDA++ L Sbjct 24 LRRLQETLGVKFRDPTALDQALSHRSLFSSKEDHCGVRHNERMEFLGDAVLGAVAAACLY 83 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFE 110 + P+ EG L+ KA L+S + + +A L + ++ + +G + + I+ D E Sbjct 84 RALPDSHEGDLAKTKAVLVSTDTLSDIALSLRIDHYLLLGKGEELSGGRHKKAILADATE 143 Query 111 ALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 A+ A+++DSG A E F + I+E + DYK+ LQ + +R++ +PEY Sbjct 144 AVIGALFLDSGFKAA---ERFVLRLLLPRVRPIREKNLHHDYKSTLQVLAHQRYRSKPEY 200 Query 171 RLISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAA 210 ++ GP H +F V+ + + R G G SKK AEQ AA Sbjct 201 TVVKRTGPDHSVRFWVDVTVGDARFGPGYGTSKKSAEQCAA 241 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ehrlichia ruminantium str. Gardel] Sequence ID: Q5FGH0.1 Length: 227 Range 1: 2 to 219 Score:110 bits(275), Expect:9e-29, Method:Compositional matrix adjust., Identities:76/223(34%), Positives:110/223(49%), Gaps:16/223(7%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQY 58 + + K + Y FK+ LL +ALTH S K++ YE LEFLGDA++N + ++L Sbjct 2 ITNAISKIIKYDFKNTQLLNEALTHPSVLSKDNNNFNYERLEFLGDAVLNLVVSEMLFNI 61 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEAL 112 P EG L+ K L+ +AQ + L FI R G N + + EAL Sbjct 62 FPYDTEGNLAKKKTALVCGTKLVEIAQSINLGIFIIMSDGERSCGGANNSNNLENALEAL 121 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G A ++ + +K SA +D KTILQE Q + P Y + Sbjct 122 IGAIYLDGGLKA--AKDFIFLFWKN---SATHMKVPPQDAKTILQEWAQSKGFPAPSYHI 176 Query 173 ISVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELI 214 I+ GP H F VE +I + TL G +KK AEQ+AA ++ Sbjct 177 INKSGPDHNPCFTVEVRINSHETLHATGHNKKLAEQKAASLML 219 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Candidatus Blochmannia floridanus] Sequence ID: Q7VRR0.1 Length: 232 Range 1: 12 to 228 Score:110 bits(276), Expect:9e-29, Method:Compositional matrix adjust., Identities:74/221(33%), Positives:120/221(54%), Gaps:12/221(5%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 L+KKLGY F LL +ALTH S+S K H E LEFLGD+++N+ I ++L + EG Sbjct 12 LQKKLGYFFHTVDLLLRALTHRSFSNK-HNERLEFLGDSILNYSITNILYHRYNHMDEGD 70 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDS 120 +S +++ L+ LA++ +L +++ +G++ E+I+ D EA+ +++DS Sbjct 71 MSRIRSSLVCSRTLVELAKEFKLGNCLKLGQGELKNKGYNRESILADTVEAIIGGIFLDS 130 Query 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 T E+ + + L+ I +KD KT LQE Q P Y + V+G H Sbjct 131 NIK---TIEMLIAFWYQFRLNKIDLEDKQKDPKTRLQEYLQHHHLPLPIYCINQVQGQAH 187 Query 181 KKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 + FI+ ++ Y +G G S+++AEQ AAE +K L E Sbjct 188 DQIFIMNCQVSSLKYSVMGRGSSRRKAEQDAAENALKFLIE 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Syntrophomonas wolfei subsp. wolfei str. Goettingen G311] Sequence ID: Q0AYW0.1 Length: 233 Range 1: 14 to 226 Score:110 bits(276), Expect:1e-28, Method:Compositional matrix adjust., Identities:73/219(33%), Positives:125/219(57%), Gaps:17/219(7%) Query 8 EKKLGYTFKDKSLLEKALTHVSYSKKEHY----ETLEFLGDALVNFFIVDLLVQYSPNKR 63 +K+L Y+ + L+ ALTH SY+++++ + LEFLGDA++N + + L + K Sbjct 14 DKQLPYSSNE--LITMALTHPSYAQEKNTVANNQRLEFLGDAVLNLVVAEYLYNHYGRKA 71 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVY 117 EG L+ ++A ++ E+ + A+ + L +++ + R G+ ++I+ D EA+ A+Y Sbjct 72 EGELTKIRAKVVCEDALAIFARNINLGQYLLLGRGEEMSGGRKRKSILADAVEAVIGAIY 131 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G + T + F E+++S G DYK+ LQE+ Q R KE Y +I G Sbjct 132 LDQGLE---TVQRFIIRQLEELISETASGDY-YDYKSKLQELVQARDKENVSYAIIEESG 187 Query 178 PHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIK 215 P H K F+ +E GEGKSKKEAEQ+AA+++++ Sbjct 188 PAHAKVFVAGVYYREQLLATGEGKSKKEAEQKAAQKVLQ 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Coxiella burnetii Dugway 5J108-111] Sequence ID: A9KFA0.1 Length: 233 Range 1: 1 to 223 Score:110 bits(275), Expect:1e-28, Method:Compositional matrix adjust., Identities:75/230(33%), Positives:125/230(54%), Gaps:17/230(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L +L ++LG+ F + LL+ ALTH S S ++ E LEFLGD+++ F I L Q P Sbjct 1 MNHLNKLMERLGHQFNNLELLKIALTHRS-SGADNNERLEFLGDSVLGFIIASELYQRRP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 REG LS ++A +++ + ++ KL +++++++ GK +I+ D EA+ Sbjct 60 QAREGDLSRMRASMVNGDELAQMSTKLGINEYLQLGVGEQKSGGKRRRSILADALEAIVG 119 Query 115 AVYIDSGRDANFTRELFYKLFKE--DILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+YID+G + R + E D LS + KKD K++LQE Q R P Y Sbjct 120 AIYIDAGLET--CRRCVLNWYGERVDDLSKLSP---KKDAKSLLQEWLQARRLPLPTYE- 173 Query 173 ISVEGPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLEES 220 + + G H + F V +K ++T G +++ AEQ AA+ ++LL++ Sbjct 174 VKITGEAHAQTFTVNCYVKGLPHKTEGVNTTRRRAEQIAAKRFLELLDDG 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Candidatus Protochlamydia amoebophila UWE25] Sequence ID: Q6MEK1.1 Length: 242 Range 1: 21 to 226 Score:110 bits(275), Expect:1e-28, Method:Compositional matrix adjust., Identities:74/211(35%), Positives:112/211(53%), Gaps:18/211(8%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSK-----KEHYETLEFLGDALVNFFIVDLLVQYSPN 61 +E KLGYTFKD LL A H S+ +H E LEFLGD+++ I D L P Sbjct 21 IEAKLGYTFKDPQLLVLAFVHRSFINENREVNQHNERLEFLGDSVLGMLISDYLYCKLPK 80 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEALWAA 115 EG LS L++ L+ Q L+L ++ R+ G+ E+I+ D+FEA+ A Sbjct 81 TPEGQLSYLRSRLVEASSCVHYIQSLDLSGYLLLGKGERMNDGRGRESILADLFEAIIGA 140 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 +Y+D G A ++ +K F + I I +++K +LQ+ QK +++ P Y+++ Sbjct 141 IYLDGGLQA--AKDFLFKNFHQHI--EIILATPLRNWKALLQDYCQKNYQQTPLYQVLHE 196 Query 176 EGPHHKKKFIVEAKIKEYRTLGEGK--SKKE 204 GP H K F + I++ R LG GK SKKE Sbjct 197 SGPDHSKVFQISVWIQD-RELGRGKGTSKKE 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pectobacterium carotovorum subsp. carotovorum PC1] Sequence ID: C6DC00.1 Length: 226 Range 1: 5 to 224 Score:110 bits(274), Expect:2e-28, Method:Compositional matrix adjust., Identities:78/224(35%), Positives:124/224(55%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF+ LL +ALTH S S K H E LEFLGD++++F I + L P Sbjct 5 LINRLQRKLGYTFQQYELLLQALTHRSASSK-HNERLEFLGDSILSFVIANALYHRFPKV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ EL + +R+ G++ E+I+ D EAL + Sbjct 64 DEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGI 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D L ++ L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQTIERLILNWYQTR-LDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ + +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGFSESVIGTGSSRRKAEQAAAEQALKKLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Edwardsiella ictaluri 93-146] Sequence ID: C5B8Y2.1 Length: 226 Range 1: 5 to 224 Score:109 bits(273), Expect:2e-28, Method:Compositional matrix adjust., Identities:77/224(34%), Positives:123/224(54%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF+ LL +ALTH S S K H E LEFLGD++++F I + L P Sbjct 5 VINRLQRKLGYTFRQHDLLMQALTHRSASSK-HNERLEFLGDSILSFVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ +L + +R+ G++ E+I+ D EAL + Sbjct 64 DEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGI 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D L ++ L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQTIERLILDWYRSR-LEEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGLSAPVVGVGSSRRKAEQAAAEQALKQLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Sequence ID: B3CMS0.1 Length: 230 Range 1: 1 to 220 Score:110 bits(274), Expect:2e-28, Method:Compositional matrix adjust., Identities:80/227(35%), Positives:119/227(52%), Gaps:23/227(10%) Query 1 MKML-EQLEKKLGYTFKDKSLLEKALTHVSYSKKEH------YETLEFLGDALVNFFIVD 53 M++L + + K + Y F D ++LE+ALTH S +K+ YE LEFLGD+++N + Sbjct 1 MRVLNDTISKVINYKFTDYAILEEALTHPSVNKRNSEDQVVSYERLEFLGDSVLNMVVSV 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGD 107 +L + P ++EG L+ K L+ +A+++EL FI R GK N + + Sbjct 61 MLFKMFPEEKEGALAKRKTDLVCGSTIANVAKEIELGNFIIMNNSERCNGGKCNLKNLEN 120 Query 108 VFEALWAAVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWK 165 EAL A+YID G ++ F + KL K DIL +D KT LQE TQ+ Sbjct 121 SLEALIGAIYIDGGLESVEKFIIRHWEKLAK-DILDP------PQDPKTSLQEWTQRNKL 173 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAE 211 P+Y L+ GP H +F + I+ Y + SKK AEQ+AAE Sbjct 174 PLPKYELVKQTGPAHNPEFTISVCIESYDKVSACAPSKKIAEQKAAE 220 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Colwellia psychrerythraea 34H] Sequence ID: Q47WP5.1 Length: 266 Range 1: 8 to 226 Score:110 bits(276), Expect:2e-28, Method:Compositional matrix adjust., Identities:79/224(35%), Positives:120/224(53%), Gaps:14/224(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +L KKLGY F + LL +ALTH S +K H E LEFLGD+++ F I + L P Sbjct 8 LARLTKKLGYEFNEPLLLVQALTHRS-AKGAHNERLEFLGDSILGFVIAEALYDKFPKHD 66 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG L+ +++ L+ +A+ L + + + G++ E+I+ D EA+ AVY Sbjct 67 EGDLTRMRSSLVKGVTLAEVARDFNLGECLILGPGELKSGGHHRESILEDAIEAIIGAVY 126 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS + + L F E L IK G +KD KT LQE Q R P Y +I G Sbjct 127 LDS--NIECCKALILSWF-ERRLMVIKPGNEQKDPKTRLQEFLQGRKIPLPTYEVIDTTG 183 Query 178 PHHKKKFIVEAK---IKEYRTLGEGKSKKEAEQRAAEELIKLLE 218 H ++F V + I E + +G S+++AEQ AA++++ L+E Sbjct 184 QSHNQEFTVRCQTSVISEV-VIAKGTSRRKAEQEAAQQILALIE 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Legionella pneumophila str. Lens] Sequence ID: Q5WVI4.1 Length: 224 Range 1: 5 to 223 Score:109 bits(273), Expect:2e-28, Method:Compositional matrix adjust., Identities:72/223(32%), Positives:122/223(54%), Gaps:12/223(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L ++L Y F + + L++ALTH S + ++YE EFLGD++++F I + L P Sbjct 5 LERLCRRLNYHFNNMAYLKQALTHCS-AGSDNYERFEFLGDSILSFVIANELFNRFPLHS 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS L+++L+ E +A+++ L ++ + +G++ +I+ D EA+ AA+Y Sbjct 64 EGQLSRLRSFLVKGEMLAEIAREIGLGDYLFLGQGELRSGGFRRTSILADALEAILAAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G A +++ L+ L KD KT LQE Q PEY L VEG Sbjct 124 LDGGMTA--AKQIILMLYSSR-LDDPDLNHCLKDAKTQLQEFLQASKFALPEYVLTKVEG 180 Query 178 PHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLLE 218 H + F V I+ + G G ++++AEQ AA+ +++ L+ Sbjct 181 DEHAQIFHVTCTIEGVSQVAYGTGPNRRKAEQLAAKAMLEQLQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Salmonella enterica subsp. enterica serovar Typhi] Sequence ID: Q8Z4K4.1 Length: 226 Range 1: 5 to 224 Score:109 bits(273), Expect:2e-28, Method:Compositional matrix adjust., Identities:78/224(35%), Positives:124/224(55%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF + LL++ALTH S S K H E LEFLGD++++F I + L P Sbjct 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-HNERLEFLGDSILSFVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ LA++ +L + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS + +L +K L I G +KD KT LQE Q P Y ++ V Sbjct 124 FLDS--NIQTVEQLILNWYKTR-LDEISPGDKQKDPKTRLQEYLQGHHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus epidermidis ATCC 12228] Sequence ID: Q8CPI1.1 Length: 245 Range 1: 22 to 239 Score:110 bits(274), Expect:2e-28, Method:Compositional matrix adjust., Identities:74/225(33%), Positives:121/225(53%), Gaps:23/225(10%) Query 9 KKLGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 K LG FK+ L ++A +H S+ ++ EH E LEFLGDA++ + L P+ Sbjct 22 KSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHL 81 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAV 116 EG L+ ++A ++ E + A K++L++ I + + G+ ++I D FEA A+ Sbjct 82 PEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGAL 141 Query 117 YIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 Y+D G D+ F ++ + ++D L + D+KT QE + K Y+LI Sbjct 142 YLDQGLDSVWTFAEKVIFPYVEDDELVGV------VDFKTQFQEYVHSQNKGDVTYQLIK 195 Query 175 VEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLL 217 EGP H + F E I E + + G+GK+KKE+EQ+AAE+ KL+ Sbjct 196 EEGPAHHRLFTSEV-ILENKAVAEGKGKTKKESEQKAAEQAYKLM 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bartonella tribocorum CIP 105476] Sequence ID: A9IRN0.1 Length: 235 Range 1: 5 to 221 Score:109 bits(273), Expect:2e-28, Method:Compositional matrix adjust., Identities:74/222(33%), Positives:122/222(54%), Gaps:14/222(6%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M++QL K G+ FKD+ L++ALTH S S++ +YE LEFLGD ++ I ++L Q P Sbjct 5 MIDQLFKLTGHRFKDEEKLKRALTHASVQDSEQGNYERLEFLGDRVLGLLIAEMLYQLFP 64 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALWA 114 EG LS +L++ + +A+++ L I++ G+ + DV EAL A Sbjct 65 QASEGELSVRLNHLVNAQTCADIAREMRLPDMIQVGFEMRNFEGRRLINMHADVVEALIA 124 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 +Y+D G ++ R K ++ A K ++D KT LQE + +P Y++I Sbjct 125 VMYLDGGLES--VRPFIQKYWQS---RAKKMDAGRRDAKTELQEWAHIQGDAQPHYQVIK 179 Query 175 VEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIK 215 GP H F+VE I + + +G+G SK+ AE+ AAE++++ Sbjct 180 RSGPDHDPVFMVEVSISGFASEIGQGSSKRNAERMAAEKILR 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Agrobacterium fabrum str. C58] Sequence ID: Q8UGK2.2 Length: 239 Range 1: 12 to 226 Score:109 bits(273), Expect:3e-28, Method:Compositional matrix adjust., Identities:77/220(35%), Positives:112/220(50%), Gaps:14/220(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 + +LE +GY FK+K+ L++ALTH S + +YE LEFLGD ++ + +LL N Sbjct 12 ISRLEALIGYEFKEKARLDRALTHASARSAAAGNYERLEFLGDRVLGLCVAELLFSTFRN 71 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAA 115 EG LS L+S E + ++ LH FIR GK + DV E+L A Sbjct 72 ASEGELSVRLNQLVSAESCAAIGDEMGLHNFIRTGSDVKKLTGKAMLNVRADVVESLIAT 131 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 +Y+D G +A +R+ K ++ S + GR +D KT LQE R+ P YR+ Sbjct 132 LYLDGGLEA--SRKFILKYWQGRATS-VDAGR--RDAKTELQEWAHARFAATPAYRVDDR 186 Query 176 EGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 GP H F V +I + G +SK+ AEQ AA L+ Sbjct 187 SGPDHDPSFTVTVEIPGVKPETGVERSKRAAEQVAATRLL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus epidermidis RP62A] Sequence ID: Q5HPV8.1 Length: 245 Range 1: 22 to 239 Score:109 bits(273), Expect:3e-28, Method:Compositional matrix adjust., Identities:74/225(33%), Positives:120/225(53%), Gaps:23/225(10%) Query 9 KKLGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 K LG FK+ L ++A +H S+ ++ EH E LEFLGDA++ + L P+ Sbjct 22 KSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHL 81 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAV 116 EG L+ ++A ++ E + A K++L++ I + + G+ ++I D FEA A+ Sbjct 82 PEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGAL 141 Query 117 YIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 Y+D G D F ++ + ++D L + D+KT QE + K Y+LI Sbjct 142 YLDQGLDTVWTFAEKVIFPYVEDDELVGV------VDFKTQFQEYVHSQNKGDVTYQLIK 195 Query 175 VEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLL 217 EGP H + F E I E + + G+GK+KKE+EQ+AAE+ KL+ Sbjct 196 EEGPAHHRLFTSEV-ILENKAVAEGKGKTKKESEQKAAEQAYKLM 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Enterococcus faecalis V583] Sequence ID: Q82ZG1.1 Length: 230 Range 1: 4 to 226 Score:109 bits(272), Expect:3e-28, Method:Compositional matrix adjust., Identities:78/230(34%), Positives:118/230(51%), Gaps:23/230(10%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHY------ETLEFLGDALVNFFIVDLL 55 ++ +L+++ G F D +LLE+A TH SY + Y E LEFLGDA++ + L Sbjct 4 QLTTELKERYGIVFHDVNLLEQAFTHSSYVNEHRYLKLSDNERLEFLGDAVLELIVSQYL 63 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVF 109 P EG L+ ++A ++ E+ A++ +I + +G + +++ D+F Sbjct 64 YLKFPELPEGKLTKMRAAIVREDSLAKFAKECHFDNYILLGKGEEASGGRTRASLLCDLF 123 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDIL-SAIKEGRVKK--DYKTILQEITQKRWKE 166 EA A+Y+D A K F ED++ I G D+KT LQE+ Q++ Sbjct 124 EAFLGALYLDQKVGAA-------KKFIEDVIFPKIDAGAFSHEMDHKTQLQEVLQRKGDV 176 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIK 215 EYRLI EGP H + F E + E LG+GKSKK AEQ AAE +K Sbjct 177 SIEYRLIKEEGPAHDRTFFTEVYMNGELIGLGQGKSKKLAEQDAAERALK 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Coxiella burnetii CbuG_Q212] Sequence ID: B6IYZ9.1 Length: 233 Range 1: 1 to 223 Score:109 bits(272), Expect:3e-28, Method:Compositional matrix adjust., Identities:74/230(32%), Positives:125/230(54%), Gaps:17/230(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L +L ++LG+ F + LL+ ALTH S S ++ E LEFLGD+++ F I L Q P Sbjct 1 MNHLNKLMERLGHQFNNLELLKIALTHRS-SGADNNERLEFLGDSVLGFIIASELYQRRP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 REG LS ++A +++ + ++ KL +++++++ GK +I+ D EA+ Sbjct 60 QAREGDLSRMRASMVNGDELAQMSTKLGINEYLQLGVGEQKSGGKRRRSILADALEAIVG 119 Query 115 AVYIDSGRDANFTRELFYKLFKE--DILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 ++YID+G + R + E D LS + KKD K++LQE Q R P Y Sbjct 120 SIYIDAGLET--CRRCVLNWYGERVDDLSKLSP---KKDAKSLLQEWLQARRLPLPTYE- 173 Query 173 ISVEGPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLEES 220 + + G H + F V +K ++T G +++ AEQ AA+ ++LL++ Sbjct 174 VKITGEAHAQTFTVNCYVKGLPHKTEGVNTTRRRAEQIAAKRFLELLDDG 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Coxiella burnetii CbuK_Q154] Sequence ID: B6J4J9.1 Length: 233 Range 1: 1 to 223 Score:109 bits(272), Expect:4e-28, Method:Compositional matrix adjust., Identities:75/230(33%), Positives:125/230(54%), Gaps:17/230(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M L +L ++LG+ F + LL+ ALTH S S ++ E LEFLGD+++ F I L Q P Sbjct 1 MNHLNKLMERLGHQFNNLELLKIALTHRS-SGADNNERLEFLGDSVLGFIIASELYQRRP 59 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWA 114 REG LS ++A +++ + ++ KL +++++++ GK +I+ D EA+ Sbjct 60 QAREGDLSRMRASMVNGDELAQMSIKLGINEYLQLGVGEQKSGGKRRRSILADALEAIVG 119 Query 115 AVYIDSGRDANFTRELFYKLFKE--DILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+YID+G + R + E D LS + KKD K++LQE Q R P Y Sbjct 120 AIYIDAGLET--CRRCVLNWYGERVDDLSKLSP---KKDAKSLLQEWLQARRLPLPTYE- 173 Query 173 ISVEGPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLEES 220 + + G H + F V +K ++T G +++ AEQ AA+ ++LL++ Sbjct 174 VKITGEAHAQTFTVNCYVKGLPHKTEGVNTTRRRAEQIAAKRFLELLDDG 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Sequence ID: Q5ZUD5.1 Length: 224 Range 1: 5 to 223 Score:108 bits(271), Expect:4e-28, Method:Compositional matrix adjust., Identities:71/223(32%), Positives:123/223(55%), Gaps:12/223(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L ++L Y F + + L++ALTH S + ++YE EFLGD++++F I + L P Sbjct 5 LERLCRRLNYHFNNIAYLKQALTHCS-AGSDNYERFEFLGDSILSFVIANELFNRFPLHS 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS L+++L+ E +A++++L ++ + +G++ +I+ D EA+ AA+Y Sbjct 64 EGQLSRLRSFLVKGEMLAEIAREIDLGDYLFLGQGELRSGGFRRTSILADALEAILAAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G A +++ L+ L KD KT LQE Q PEY L +EG Sbjct 124 LDGGMIA--AKQIILMLYSSR-LDDPDLNHCLKDAKTQLQEFLQASKFALPEYVLTKIEG 180 Query 178 PHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLLE 218 H + F V I+ + G G ++++AEQ AA+ +++ L+ Sbjct 181 DEHAQIFHVTCTIEGVSQVAYGTGPNRRKAEQLAAKAMLEQLQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Listeria innocua Clip11262] Sequence ID: Q92AK3.1 Length: 229 Range 1: 1 to 226 Score:108 bits(271), Expect:5e-28, Method:Compositional matrix adjust., Identities:71/232(31%), Positives:116/232(50%), Gaps:21/232(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYET------LEFLGDALVNFFIVDL 54 M E+L++ +G+ F++ LL++A TH SY + E LEFLGDA++ + D Sbjct 1 MNQWEELQESVGFDFQNVELLQQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDY 60 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L P+ EG ++ ++A ++ E A+ + K++R+ + G+ ++ DV Sbjct 61 LFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLGKGEEKAGGRTRPALLADV 120 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKE 166 FE+ A+Y+D+G D K + I I G + DYKT LQEI Q+ Sbjct 121 FESFIGALYLDNGIDK------VVKFLERVIFPKIDAGAYLQTVDYKTQLQEIVQRDRDV 174 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 EY ++ GP H K F + + + G G++KK+AEQ AA+ I L Sbjct 175 LIEYDILGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSAAQFAINQL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Sequence ID: Q75FW5.1 Length: 247 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Leptospira interrogans serovar Lai str. 56601] Sequence ID: Q8EXX3.1 Length: 247 Range 1: 18 to 239 Score:108 bits(271), Expect:6e-28, Method:Compositional matrix adjust., Identities:77/225(34%), Positives:119/225(52%), Gaps:15/225(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLL 55 ++ L++L KK+G F A H SY + E E LEFLGD+++ L Sbjct 18 VRSLQKLSKKIGIKFSKVEYYNTAFIHSSYKNENQEILEDNERLEFLGDSVLGLVAARSL 77 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVF 109 + P EG LS +K+ ++S N +++KLEL +++ + +G+ N + ++F Sbjct 78 FRKYPKANEGELSRIKSRIVSTPILNSISEKLELSEYLLLGKGEKNSLGKGRRKLSANLF 137 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 E+L A+Y+D G + + + E + + KE V +DYKT LQE +QK +K P Sbjct 138 ESLVGAIYLDQGFE--IAEKFILRHLSEFVENPEKEESV-RDYKTQLQEYSQKHFKILPI 194 Query 170 YRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEEL 213 YR S GP H K F V +I+ ++ G G SKK AEQ AA+EL Sbjct 195 YRTKSESGPDHAKTFQVVVRIRDQWEASGSGVSKKSAEQNAAKEL 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Legionella pneumophila str. Corby] Sequence ID: A5ID21.1 Length: 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Legionella pneumophila str. Paris] Sequence ID: Q5X446.1 Length: 224 Range 1: 5 to 223 Score:108 bits(269), Expect:6e-28, Method:Compositional matrix adjust., Identities:71/223(32%), Positives:122/223(54%), Gaps:12/223(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 LE+L ++L Y F + + L++ALTH S + ++YE EFLGD++++F I + L P Sbjct 5 LERLCRRLNYHFNNIAYLKQALTHCS-AGSDNYERFEFLGDSILSFVIANELFNRFPLHS 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS L+++L+ E +A+++ L ++ + +G++ +I+ D EA+ AA+Y Sbjct 64 EGQLSRLRSFLVKGEMLAEIAREIGLGDYLFLGQGELRSGGFRRTSILADALEAILAAIY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G A +++ L+ L KD KT LQE Q PEY L +EG Sbjct 124 LDGGMTA--AKQIILMLYSSR-LDDPDLNHCLKDAKTQLQEFLQASKFALPEYVLTKIEG 180 Query 178 PHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLLE 218 H + F V I+ + G G ++++AEQ AA+ +++ L+ Sbjct 181 DEHAQIFHVTCTIEGVSQVAYGTGPNRRKAEQLAAKAMLEQLQ 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Sequence ID: Q8D305.1 Length: 226 Range 1: 7 to 224 Score:108 bits(269), Expect:7e-28, Method:Compositional matrix adjust., Identities:70/222(32%), Positives:124/222(55%), Gaps:12/222(5%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 +L+KK+GY F + +L++ALTH S+S K + E LEFLGD+++N+ I D L N E Sbjct 7 NKLQKKMGYLFHNNIILKQALTHRSFSSKNN-ERLEFLGDSILNYIISDALYNNFTNIPE 65 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWAAVYI 118 G LS +++YL+ +A++ L ++ + GK ++I+ + EA+ +++ Sbjct 66 GKLSQMRSYLVRGNTLAEIAREFCLGDYLILGIGEVKTGGKNRDSILSNAMEAIIGGIFL 125 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 DS + N T E+ +K + S + +KKD KT LQE Q P+Y + ++ G Sbjct 126 DS--NINKTHEIVISWYKNRLYS-MSLKNLKKDPKTRLQEYLQGNKFSLPQYYIKNITGE 182 Query 179 HHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 H ++F + I + + +G GK++++AEQ AA++ + L Sbjct 183 SHNQEFTICCFIDDLKKSVIGYGKTRRKAEQSAAKQALLLFN 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pectobacterium atrosepticum SCRI1043] Sequence ID: Q6D219.1 Length: 226 Range 1: 5 to 224 Score:108 bits(269), Expect:7e-28, Method:Compositional matrix adjust., Identities:78/224(35%), Positives:124/224(55%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF+ LL +ALTH S S K H E LEFLGD++++F I + L P Sbjct 5 LINRLQRKLGYTFQQYELLLQALTHRSASSK-HNERLEFLGDSILSFVIANALYDRFPKV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ EL + +R+ G++ E+I+ D EAL + Sbjct 64 DEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGI 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D L ++ L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DILNIERLILNWYQTR-LDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ + +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGFSESVIGTGSSRRKAEQAAAEQALKKLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus RF122] Sequence ID: Q2YXI3.1 Length: 243 Range 1: 24 to 241 Score:108 bits(270), Expect:9e-28, Method:Compositional matrix adjust., Identities:72/224(32%), Positives:121/224(54%), Gaps:21/224(9%) Query 11 LGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LG+T+++ L ++A +H S+ ++ +H E LEFLGDA++ + L PN E Sbjct 24 LGFTYQNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPE 83 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYI 118 G L+ ++A ++ E + A K+ L++ I + + G+ ++I DVFEA A+Y+ Sbjct 84 GNLTKMRATIVCEPSLVIFANKIGLNEMILLGKGEEKTGGRTRPSLISDVFEAFIGALYL 143 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYRLISVE 176 D G D + +K ++ I +++ + D+KT QE ++ K Y LI E Sbjct 144 DQGLD------IVWKFAEKVIFPHVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEE 197 Query 177 GPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEE 219 GP H + F E ++ E G+GK+KKE+EQRAAE K L++ Sbjct 198 GPAHHRLFTSEVILQGEAIAEGKGKTKKESEQRAAESAYKQLKQ 241 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus haemolyticus JCSC1435] Sequence ID: Q4L5T5.1 Length: 245 Range 1: 22 to 233 Score:108 bits(270), Expect:9e-28, Method:Compositional matrix adjust., Identities:68/218(31%), Positives:113/218(51%), Gaps:21/218(9%) Query 9 KKLGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 +LG+T+ + L ++A +H S+ + H E LEFLGDA++ + L P+ Sbjct 22 NELGFTYSNIDLYQQAFSHSSFINDFNMDRLAHNERLEFLGDAVLELTVSRYLFDKHPDL 81 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAV 116 EG L+ ++A ++ E + A K+EL++ I + + G+ +++ D FEA A+ Sbjct 82 PEGNLTKMRATIVCEPSLVIFANKIELNQLILLGKGEEKTGGRTRPSLVSDAFEAFVGAL 141 Query 117 YIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 Y+D G D F ++ + ++D L + D+KT QE + + YRLI Sbjct 142 YLDQGLDVVWQFAEKVIFPYVEDDELVGV------VDFKTQFQEYVHSQNRGDVTYRLIK 195 Query 175 VEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAE 211 EGP H + F E + E G+GK+KKE+EQ+AAE Sbjct 196 EEGPAHHRLFTSEVILENEAVATGQGKTKKESEQKAAE 233 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Sequence ID: C4K3Z3.1 Length: 226 Range 1: 6 to 224 Score:107 bits(268), Expect:1e-27, Method:Compositional matrix adjust., Identities:72/223(32%), Positives:124/223(55%), Gaps:12/223(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 + LE KL Y+FK++SLL +ALTH S +H E LEFLGD++++F I + L P Sbjct 6 INSLELKLRYSFKERSLLLQALTHRSL-HTQHNERLEFLGDSILSFVIANQLYHRFPEIN 64 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVY 117 EG +S ++A L+ + +A++ ++ ++++ +G++ E+I+ D EA+ A++ Sbjct 65 EGNMSRMRATLVRGDTLTEIAREFDIGAYLQLGQGELKTGGAQRESILADSIEAIIGAIF 124 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +DS D + + + + L I +KD KT LQE Q P Y L V G Sbjct 125 LDS--DIQTVEKTILRWYHKR-LEQINPTHHQKDPKTRLQEYMQSHQLPLPFYLLAQVCG 181 Query 178 PHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLE 218 H ++F + ++ E +G+G ++++AEQ AAE+ +K LE Sbjct 182 EAHDQEFTIHCQVSGLEELVVGKGSNRRKAEQEAAEKTLKKLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bartonella bacilliformis KC583] Sequence ID: A1US36.1 Length: 235 Range 1: 4 to 221 Score:108 bits(269), Expect:1e-27, Method:Compositional matrix adjust., Identities:72/223(32%), Positives:122/223(54%), Gaps:14/223(6%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE--HYETLEFLGDALVNFFIVDLLVQYS 59 + ++QL+K G++FK++ LL+KALTH S + E +YE LEFLGD ++ + ++L Q+ Sbjct 4 QTIDQLKKLTGHSFKNEDLLKKALTHSSVQRSEQGNYERLEFLGDRVLGLLVAEMLYQFF 63 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALW 113 P EG LS L++ + +A+++ L + + G+ + DV EAL Sbjct 64 PQASEGELSVRLNGLVNAQTCADIAREIGLPDMVHVGCEMKNLEGRRLANMHADVVEALI 123 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 A +Y+D G + F + + +D I R +D KT LQE + +P+YR+I Sbjct 124 AVIYLDGGLK---SVRPFIQRYWQDRAKKIDASR--RDAKTELQEWAHTQNGVQPQYRVI 178 Query 174 SVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIK 215 G H F+VE + + + +GEG SK+ AE+ AAE++++ Sbjct 179 KRCGLDHDPVFVVEVSVPGFVSEVGEGGSKRHAERAAAEKILR 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Nitrosomonas europaea ATCC 19718] Sequence ID: Q820I0.1 Length: 245 Range 1: 29 to 240 Score:108 bits(269), Expect:1e-27, Method:Compositional matrix adjust., Identities:74/216(34%), Positives:115/216(53%), Gaps:12/216(5%) Query 9 KKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLS 68 +KLGYTFK LL +ALTH S + E EFLGD+++N + LL + P+ EG L+ Sbjct 29 QKLGYTFKQPDLLREALTHRSLGFPNN-ERFEFLGDSVLNCAVSTLLFKRFPSLPEGDLT 87 Query 69 PLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEALWAAVYIDSGR 122 L+A ++++ + LA L + + I R G +I+ + EA+ A+Y++SG Sbjct 88 RLRANFVNQQALHRLASALGIGELILLGEGERKSGGHHRPSILANAVEAIIGAIYLESG- 146 Query 123 DANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKK 182 ++ L+ E ++ + KD KT+LQE Q R PEY ++ +G H + Sbjct 147 -FAVVEQVIVALY-EPLIRQLDPDTSGKDSKTLLQEYLQSRKIALPEYSVLLAQGDPHAQ 204 Query 183 KFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKL 216 F VE I + RT GEG S++ AEQ AA + +L Sbjct 205 VFHVECVIPGFGIRTRGEGTSRRRAEQEAARQAYEL 240 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pantoea ananatis LMG 20103] Sequence ID: D4GKM1.2 Length: 226 Range 1: 5 to 209 Score:107 bits(268), Expect:1e-27, Method:Compositional matrix adjust., Identities:68/209(33%), Positives:112/209(53%), Gaps:12/209(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF LL++ALTH S S K H E LEFLGD+++++ I + L P Sbjct 5 LINKLQRKLGYTFTHSELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ +L + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D +L ++ L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQTVEKLILDWYQTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKK 203 G H ++F + ++ +G G S++ Sbjct 181 GEAHDQEFTIHCQVSGMAEPVVGVGSSRR 209 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Photorhabdus laumondii subsp. laumondii TTO1] Sequence ID: Q7N1X5.1 Length: 226 Range 1: 5 to 224 Score:107 bits(267), Expect:2e-27, Method:Compositional matrix adjust., Identities:80/224(36%), Positives:123/224(54%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF LL +ALTH S S K H E LEFLGD++++F I + L P Sbjct 5 VINRLQRKLGYTFDQYDLLIQALTHRSASSK-HNERLEFLGDSILSFVIANALYHRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ LA++ EL + +R+ G++ E+I+ D EAL A+ Sbjct 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGYRRESILADTVEALIGAI 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D + + E L+ I G +KD KT LQE Q P Y ++ V Sbjct 124 FLDS--DIQSIERIILSWY-ETRLNEISPGDKQKDPKTRLQEYLQGHHLPLPSYLVVMVR 180 Query 177 GPHHKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ E G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGIEQPVKGTGSSRRKAEQAAAEQALKQLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Variovorax paradoxus S110] Sequence ID: C5CSF5.1 Length: 228 Range 1: 5 to 212 Score:107 bits(267), Expect:2e-27, Method:Compositional matrix adjust., Identities:74/212(35%), Positives:112/212(52%), Gaps:12/212(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L L+++L ++F D LL+ ALTH S+S +H E LEFLGD+++N + LL Sbjct 5 LTALQERLKHSFSDTRLLQLALTHRSFSA-DHNERLEFLGDSVLNLAVSHLLYTRLSALP 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS ++A L+ ++ + LA +L+L +R+ G+ +I+ D EAL AVY Sbjct 64 EGDLSRVRANLVKQDTLHRLALELQLSPLLRLGEGEARSGGPNRPSILADALEALIGAVY 123 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D+G A E + E + + V KD KT LQE Q + P YR+ + G Sbjct 124 LDAGFSAA---EALVRRLYESVEINPRMDAVAKDPKTELQEWLQGHKMKLPVYRVAATLG 180 Query 178 PHHKKKFIVEAKIKE--YRTLGEGKSKKEAEQ 207 HK+ F VE ++ E R G G S++ EQ Sbjct 181 AAHKQTFDVECEVPELGLRERGIGGSRRAGEQ 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bartonella henselae str. Houston-1] Sequence ID: Q6G459.1 Length: 235 Range 1: 3 to 221 Score:107 bits(267), Expect:2e-27, Method:Compositional matrix adjust., Identities:77/224(34%), Positives:123/224(54%), Gaps:14/224(6%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQY 58 + M++QLEK G+ FKDK L+KALTH S S++ +YE LEFLGD ++ I ++L Q Sbjct 3 LPMIDQLEKLTGHYFKDKKKLKKALTHSSVQGSEQGNYERLEFLGDRVLGLLIAEMLYQL 62 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEAL 112 P EG LS L++ + +A ++EL I + +G+ + DV EAL Sbjct 63 FPQASEGELSVRLNSLVNAQTCADIALEMELPVMIHVGFEMKNLKGRRLTNMYADVIEAL 122 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A +Y+D G + + F + + + + GR +D KT LQE + +P YR+ Sbjct 123 IAVIYLDGGLE---SVRPFIQRYWQSRAKQMDAGR--RDAKTQLQEWAHVQGGVQPHYRV 177 Query 173 ISVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIK 215 + GP H F+VE I + + +G+G SK+ AE+ AAE++++ Sbjct 178 VKRSGPDHDPVFMVEVSIPGFASEIGQGNSKRCAERMAAEKILR 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Nitrosomonas eutropha C91] Sequence ID: Q0AF70.1 Length: 245 Range 1: 29 to 240 Score:107 bits(267), Expect:3e-27, Method:Compositional matrix adjust., Identities:76/216(35%), Positives:116/216(53%), Gaps:12/216(5%) Query 9 KKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLS 68 +KLGYTFK LL++ALTH S + E LEFLGD+++N + LL + EG L+ Sbjct 29 QKLGYTFKQPDLLQEALTHRSLGFPNN-ERLEFLGDSVLNCAVSTLLFKRFLLLPEGDLT 87 Query 69 PLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEALWAAVYIDSGR 122 L+A ++++ + LA L + + I R G +I+ + EA+ A+Y++SG Sbjct 88 RLRANFVNQDALHQLASALGIGELILLGDGERKSGGHQRPSILANAMEAIIGAIYLESGF 147 Query 123 DANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKK 182 + ++ L+ + +L+ + KD KT+LQE Q R + PEY + G H + Sbjct 148 EK--VDQVIVALY-DPLLNQLDPDLFGKDPKTLLQEYLQSRKVDLPEYSTLLTRGDAHAQ 204 Query 183 KFIVEAKIKEY--RTLGEGKSKKEAEQRAAEELIKL 216 F VE I E+ RT GEG S++ AEQ AA KL Sbjct 205 VFHVECVIPEFAIRTSGEGTSRRRAEQEAARRAYKL 240 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Anoxybacillus flavithermus WK1] Sequence ID: B7GGE9.1 Length: 238 Range 1: 12 to 226 Score:107 bits(266), Expect:3e-27, Method:Compositional matrix adjust., Identities:70/221(32%), Positives:112/221(50%), Gaps:21/221(9%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQYS 59 Q +++ G F+++ LL +A TH SY + E E LEFLGDA++ + L + Sbjct 12 QFQEQTGIFFRNEKLLIQAFTHSSYVNEHRKRLHEDNERLEFLGDAVLELTVSQYLFEQF 71 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALW 113 P EG L+ ++A ++ E A L + + + G++ +++ DVFEA Sbjct 72 PQMSEGELTKMRAAIVCEPSLVTFAHALSFGDLVLLGKGEELTGGRMRPSLLADVFEAFI 131 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYR 171 A+Y+D G +A + + I I+EG DYK+ LQE Q+ EY+ Sbjct 132 GALYLDQGIEA------VVQFLGKTIFPKIREGAFSHVMDYKSQLQEFVQRDGSGVLEYK 185 Query 172 LISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAE 211 ++ GP H K+F+ + E +G G+SKKEAEQRAA+ Sbjct 186 ILQERGPAHNKEFVSRVSLNGEELGVGVGRSKKEAEQRAAQ 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus JH9] Sequence ID: A5ISB8.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus str. Newman] Sequence ID: A6QGD3.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus JH1] Sequence ID: A6U152.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus USA300_TCH1516] Sequence ID: A8Z3R9.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus N315] Sequence ID: P66668.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus MW2] Sequence ID: P66669.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus USA300] Sequence ID: Q2FHK5.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus NCTC 8325] Sequence ID: Q2FZ50.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus COL] Sequence ID: Q5HGJ9.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus MSSA476] Sequence ID: Q6G9Y0.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus MRSA252] Sequence ID: Q6GHK2.1 Length: 243 Range 1: 24 to 241 Score:107 bits(266), Expect:4e-27, Method:Compositional matrix adjust., Identities:71/224(32%), Positives:120/224(53%), Gaps:21/224(9%) Query 11 LGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LG+T+++ L ++A +H S+ ++ +H E LEFLGDA++ + L PN E Sbjct 24 LGFTYQNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPE 83 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYI 118 G L+ ++A ++ E + A K+ L++ I + + G+ ++I D FEA A+Y+ Sbjct 84 GNLTKMRATIVCEPSLVIFANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYL 143 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYRLISVE 176 D G D + +K ++ I +++ + D+KT QE ++ K Y LI E Sbjct 144 DQGLD------IVWKFAEKVIFPHVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEE 197 Query 177 GPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEE 219 GP H + F E ++ E G+GK+KKE+EQRAAE K L++ Sbjct 198 GPAHHRLFTSEVILQGEAIAEGKGKTKKESEQRAAESAYKQLKQ 241 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Shewanella woodyi ATCC 51908] Sequence ID: B1KI57.1 Length: 225 Range 1: 4 to 209 Score:106 bits(264), Expect:5e-27, Method:Compositional matrix adjust., Identities:70/213(33%), Positives:114/213(53%), Gaps:17/213(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +K + +L + LGY F + +LL+ ALTH S + K H E LEFLGD++++ I D L P Sbjct 4 IKNIPRLCRTLGYDFSELALLDHALTHRSAASK-HNERLEFLGDSILSIIISDALYHQFP 62 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 EG LS ++A L+ + + + +L ++++ G++ E+II D EA+ Sbjct 63 KATEGDLSRMRATLVCGKMLAEIGFEFKLGDYLKLGPGELKSGGFRRESIIADAVEAIIG 122 Query 115 AVYIDSGRDANFTRELFYKLFKE--DILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 AVY+DS D TR L +K + + I + KD KT+LQE+ Q K P Y++ Sbjct 123 AVYLDS--DLEVTRSLVLGWYKTRLETIQPINQ----KDPKTLLQELLQGYKKPLPVYKV 176 Query 173 ISVEGPHHKKKFIVEAKIKEYR--TLGEGKSKK 203 + G H + F +E ++E R +G S++ Sbjct 177 TDIRGEAHAQTFTIECYVEELRKPVVGVASSRR 209 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Lactiplantibacillus plantarum WCFS1] Sequence ID: Q88WK0.1 Length: 231 Range 1: 9 to 230 Score:106 bits(264), Expect:5e-27, Method:Compositional matrix adjust., Identities:71/229(31%), Positives:124/229(54%), Gaps:23/229(10%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQYSP 60 L+++ G F D LL +A T SY + ++YE +EFLGDA++ + + L + Sbjct 9 LKERFGIVFNDPDLLAEAFTQASYVNEHQDQQLKYYERVEFLGDAVLELVVSEYLYKRYK 68 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWA 114 + +G L+ L+A ++ EE F A++ + ++IR+ +G+ ++++ D+FE+ Sbjct 69 DMPQGKLTRLRAAMVCEESFASFARECDFPQYIRLGKGEQKAHAWERDSLLCDIFESFVG 128 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYRL 172 A+Y+D G RE K + I + EGR DYKT LQE Q+ +Y+L Sbjct 129 ALYLDQG------REPVLKFVHQVIFPKLDEGRFDGVFDYKTTLQEYLQRDGDVAIDYQL 182 Query 173 ISVEGPHHKKKFIVEAKIKEYRTLGE--GKSKKEAEQRAAEELIKLLEE 219 I +GP +++ + + A + + + +GE G SKKEAEQ AA + L++ Sbjct 183 IEQDGPANERSYEI-AVLADGQKIGEGWGHSKKEAEQSAARQAYSQLQQ 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292] Sequence ID: Q49X17.1 Length: 244 Range 1: 22 to 239 Score:106 bits(264), Expect:7e-27, Method:Compositional matrix adjust., Identities:69/224(31%), Positives:118/224(52%), Gaps:21/224(9%) Query 9 KKLGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++L F L ++A +H S+ ++ +H E LEFLGDA++ + L P Sbjct 22 QELNLDFNRVDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKYPEL 81 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAV 116 EG L+ ++A ++ E + A K++L+ I + + G+ +++ D FEA A+ Sbjct 82 PEGNLTKMRATIVCEPSLVIFANKIQLNDLILLGKGEEKTGGRTRPSLVSDAFEAFVGAL 141 Query 117 YIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 Y+D G +A F+ ++ + ++D L + D+KT QE ++ K YRLI+ Sbjct 142 YLDQGLEAVWQFSEQIIFPYVEDDELDGV------VDFKTQFQEYVHRQNKGDVTYRLIN 195 Query 175 VEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLL 217 EGP H + F E ++E G+GK+KKE+EQ+AAE K+L Sbjct 196 EEGPAHHRLFTSEVILEEDAVAEGKGKTKKESEQKAAERAYKIL 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Sinorhizobium fredii NGR234] Sequence ID: C3M8S4.1 Length: 239 Range 1: 14 to 227 Score:105 bits(263), Expect:8e-27, Method:Compositional matrix adjust., Identities:76/222(34%), Positives:115/222(51%), Gaps:17/222(7%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +LE +GY F +K L++ALTH S ++ +Y+ LEFLGD ++ + +LL Q + Sbjct 14 RLETAIGYQFAEKERLDRALTHSSARNARASNYQRLEFLGDRVLGLCVAELLFQTFLDAN 73 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVY 117 EG LS L+S E +A +L LH++IR GK + DV E+L AA+Y Sbjct 74 EGELSVRLNQLVSAESCARVADELSLHEYIRTGSDVKKITGKHMMNVRADVVESLIAAIY 133 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G +A R + + + SA +G ++D KT LQE ++ P YR G Sbjct 134 LDGGLEA--ARRFVLRHWTDRAASA--DG-ARRDAKTELQEWAHAKFGAAPRYRTDDRSG 188 Query 178 PHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIKLLE 218 P H +F V ++ G +SK+ AEQ AA ++LLE Sbjct 189 PDHDPRFTVTVEVDGIAPETGTDRSKRGAEQIAA---MRLLE 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Lactococcus lactis subsp. cremoris SK11] Sequence ID: Q030F9.1 Length: 231 Range 1: 2 to 225 Score:105 bits(262), Expect:8e-27, Method:Compositional matrix adjust., Identities:76/231(33%), Positives:117/231(50%), Gaps:23/231(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDL 54 +K+ E+L+ G F D+ LL+ A TH S++ +E + E LEFLGD ++ I D Sbjct 2 LKLQEKLKNDYGLVFNDEDLLKTAFTHSSFTNEERLPKIANNERLEFLGDVALSLVISDY 61 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L + P K EG LS +++ ++ E ++ +F+R+ G+ ET + ++ Sbjct 62 LYRTYPEKLEGELSKMRSSIVRTESLANFSRSCGFGEFLRLGHGEEKMGGRDRETTLENL 121 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKE 166 FEA A++ID G D K + ++ +K K DYKT LQE+ Q + Sbjct 122 FEAFLGALFIDQGMDE------VRKFIQHVVIPHVKNDDYVKVIDYKTELQEVLQVGGET 175 Query 167 RPEYRLISVEGPHHKKKFIVEAKIKEYRTLGE--GKSKKEAEQRAAEELIK 215 Y ++ EGP H + F+ A + LG GKSKK AEQ+AAE IK Sbjct 176 TITYNILKEEGPAHDRSFVA-AVYNNGKELGRGLGKSKKVAEQKAAENAIK 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Sinorhizobium meliloti 1021] Sequence ID: Q92R47.1 Length: 238 Range 1: 13 to 226 Score:105 bits(263), Expect:9e-27, Method:Compositional matrix adjust., Identities:79/222(36%), Positives:114/222(51%), Gaps:17/222(7%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +LE +GY F +K L++ALTH S + +Y+ LEFLGD ++ + +LL Q + Sbjct 13 RLEAAIGYRFAEKERLDRALTHSSARSGRAINYQRLEFLGDRVLGLCVAELLFQTFTDAN 72 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVY 117 EG LS L+S E +A +L LH+FIR GK + DV E+L AA+Y Sbjct 73 EGELSVRLNQLVSAESCAKVADELSLHEFIRTGSDVKKITGKHMMNVRADVVESLIAAIY 132 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G DA R + + SA +G ++D KT LQE ++ P+YR G Sbjct 133 LDGGLDA--ARRFVLEHWTHRAASA--DG-ARRDAKTELQEWAHAKFGVAPKYRTDDRSG 187 Query 178 PHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIKLLE 218 P H +F V ++ G +SK+ AEQ AA +KLLE Sbjct 188 PDHDPRFTVTVEVDGIAPETGVDRSKRGAEQVAA---MKLLE 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Leptospira borgpetersenii serovar Hardjo-bovis str. JB197] Sequence ID: Q04R64.1 Length: 247 Range 1: 18 to 239 Score:105 bits(262), Expect:1e-26, Method:Compositional matrix adjust., Identities:76/228(33%), Positives:117/228(51%), Gaps:21/228(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLL 55 ++ ++L KK+G F A H SY + E E LEFLGD+++ L Sbjct 18 IQSFKKLSKKIGIKFSKIEYYNTAFIHSSYKNENPEILEDNERLEFLGDSVLGLVAARSL 77 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINET------IIGDVF 109 Q P EG LS +K+ ++S N +A+KL L +++ + +G+ N I ++F Sbjct 78 FQKYPKASEGELSRIKSKIVSTPILNSIAEKLNLGEYLLLGKGEKNSQGKGRRKIAANLF 137 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK---KDYKTILQEITQKRWKE 166 E+L A+Y+D G E+ K + +L + ++ +DYKT LQE +QK +K Sbjct 138 ESLVGAIYLDRG------FEVAEKFIVQHLLEFAENPDMEESVRDYKTQLQEYSQKHFKT 191 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEEL 213 P YR+ GP H K F V +I+ ++ G G SKK AEQ AA+EL Sbjct 192 LPVYRMKGESGPDHSKTFQVSVRIRDQWEASGYGASKKIAEQNAAKEL 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Sinorhizobium medicae WSM419] Sequence ID: A6U7A8.1 Length: 238 Range 1: 13 to 226 Score:105 bits(261), Expect:1e-26, Method:Compositional matrix adjust., Identities:79/222(36%), Positives:114/222(51%), Gaps:17/222(7%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +LE +GY F +K L++ALTH S + +Y+ LEFLGD ++ + +LL Q + Sbjct 13 RLEAAIGYQFAEKERLDRALTHSSARSGRAINYQRLEFLGDRILGLCVAELLFQTFSDAN 72 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVY 117 EG LS L+S E +A +L LH+FIR GK + DV E+L AA+Y Sbjct 73 EGELSVRLNQLVSAESCAKVADELSLHEFIRTGSDVKKITGKHMMNVRADVVESLIAAIY 132 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G +A R + + SA +G ++D KT LQE R+ P+YR G Sbjct 133 LDGGLEA--ARRFVLEHWTHRAASA--DG-ARRDAKTELQEWAHARFGVAPKYRTEDRSG 187 Query 178 PHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIKLLE 218 P H +F V ++ G +SK+ AEQ AA +KLLE Sbjct 188 PDHDPRFTVTVEVDGIDPETGVDRSKRGAEQVAA---MKLLE 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Caulobacter vibrioides NA1000] Sequence ID: B8H627.1 Length: 231 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Caulobacter vibrioides CB15] Sequence ID: Q9A805.1 Length: 231 Range 1: 5 to 214 Score:104 bits(260), Expect:2e-26, Method:Compositional matrix adjust., Identities:72/214(34%), Positives:113/214(52%), Gaps:15/214(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYS----KKEHYETLEFLGDALVNFFIVDLLV 56 + + LE+++G+ F+D+ LLE+ALTH S K E LEF+GD ++ + L Sbjct 5 VAAVGDLERRIGHRFEDRELLERALTHASVGDGAKKVRDNEVLEFIGDRVLGLLAAEALA 64 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFE 110 Q P +EG L+P L+S E +A+K EL +R+ G+ ++I+ E Sbjct 65 QRFPKAKEGELAPRLNALVSRETCARVARKAELGPALRLSASSSKIGGRETDSILAGATE 124 Query 111 ALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 AL AA+Y D G +A R++F L+ ++ A EGR +D KT LQE Q + + P Y Sbjct 125 ALMAALYQDGGLEA--ARKVFLDLWNDEFDRA-GEGR-PRDPKTALQEWAQGQGRPLPTY 180 Query 171 RLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKK 203 R++ GP H F VE + + +GKS++ Sbjct 181 RVLDRTGPDHAPVFTVEVSVTGVDPAIAKGKSRQ 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus Mu3] Sequence ID: A7X1J9.1 Length: 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus aureus subsp. aureus Mu50] Sequence ID: Q931T1.1 Length: 243 Range 1: 24 to 241 Score:105 bits(261), Expect:2e-26, Method:Compositional matrix adjust., Identities:70/224(31%), Positives:120/224(53%), Gaps:21/224(9%) Query 11 LGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LG+T+++ L ++A +H S+ ++ +H E LEFLGDA++ + L PN E Sbjct 24 LGFTYQNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPE 83 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYI 118 G L+ ++A ++ E + A K+ L++ I + + G+ ++I D FEA A+Y+ Sbjct 84 GNLTKMRATIVCEPSLVIFANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYL 143 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYRLISVE 176 D G D + +K ++ I +++ + D+KT QE ++ K Y LI E Sbjct 144 DQGLD------IVWKFAEKVIFPHVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEE 197 Query 177 GPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEE 219 GP H + F E ++ E G+GK+KKE+EQRAA+ K L++ Sbjct 198 GPAHHRLFTSEVILQGEAIAEGKGKTKKESEQRAAKSAYKQLKQ 241 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Lactococcus lactis subsp. lactis Il1403] Sequence ID: Q9CHD0.1 Length: 231 Range 1: 2 to 225 Score:104 bits(260), Expect:2e-26, Method:Compositional matrix adjust., Identities:75/231(32%), Positives:118/231(51%), Gaps:23/231(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDL 54 +K+ ++L+ G F D+ LL+ A TH S++ +E + E LEFLGD ++ I D Sbjct 2 LKLQKKLKNDYGLVFNDEDLLKTAFTHSSFTNEERLPKIANNERLEFLGDVALSLVISDY 61 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L + P K EG LS +++ ++ E ++ +F+R+ G+ ET + ++ Sbjct 62 LYRTYPEKLEGELSKMRSSIVRTESLANFSRSCGFGEFLRLGHGEEKMGGRDRETTLENL 121 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKE 166 FEA A++ID G D K + ++ +K K DYKT LQE+ Q + Sbjct 122 FEAFLGALFIDQGMDE------VRKFIQHVVIPHVKNDDYVKVIDYKTELQEVLQIGGET 175 Query 167 RPEYRLISVEGPHHKKKFIVEAKIKEYRTLGE--GKSKKEAEQRAAEELIK 215 Y+++ EGP H + F+ A + LG GKSKK AEQ+AAE IK Sbjct 176 TISYKILKEEGPAHDRSFVA-AVFNNGKELGRGLGKSKKVAEQKAAENAIK 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Leptospira borgpetersenii serovar Hardjo-bovis str. L550] Sequence ID: Q053L4.1 Length: 247 Range 1: 18 to 239 Score:105 bits(261), Expect:2e-26, Method:Compositional matrix adjust., Identities:76/228(33%), Positives:117/228(51%), Gaps:21/228(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLL 55 ++ ++L KK+G F A H SY + E E LEFLGD+++ L Sbjct 18 IQSFKKLSKKIGIKFSKIEYYNTAFIHSSYKNENPEILEDNERLEFLGDSVLGLVAARSL 77 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINET------IIGDVF 109 Q P EG LS +K+ ++S N +A+KL L +++ + +G+ N I ++F Sbjct 78 FQKYPKASEGELSRIKSKIVSTPILNSIAEKLNLGEYLLLGKGEKNSQGKGRRKIAANLF 137 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVK---KDYKTILQEITQKRWKE 166 E+L A+Y+D G E+ K + +L + ++ +DYKT LQE +QK +K Sbjct 138 ESLVGAIYLDRG------FEVAEKFIVQHLLEFAENPDMEESVRDYKTQLQEYSQKHFKT 191 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEEL 213 P YR+ GP H K F V +I+ ++ G G SKK AEQ AA+EL Sbjct 192 LPVYRMKGESGPDHSKMFQVSVRIRDQWEASGYGASKKIAEQNAAKEL 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Treponema denticola ATCC 35405] Sequence ID: Q73NX5.1 Length: 246 Range 1: 16 to 231 Score:105 bits(261), Expect:2e-26, Method:Compositional matrix adjust., Identities:76/220(35%), Positives:116/220(52%), Gaps:17/220(7%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHY-----ETLEFLGDALVNFFIVDLLVQY 58 L + +K+ G FKD LL+ A H S+S + + E LEFLGD+++ L + Sbjct 16 LLEFQKQAGLKFKDLRLLDLAFHHRSFSNEHNNFHANNERLEFLGDSVLGLVAASYLYKS 75 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEAL 112 ++ EG L+ +KA +SE+ + A KL + ++ + RG + + I+ D EA+ Sbjct 76 FEDRPEGELAKIKASAVSEDALSKTASKLNISNYLVLGRGEEMSGGREKKAILADALEAV 135 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A YIDSG A ++ +L + I S + E + DYK++LQE+ QK++K P+Y L Sbjct 136 IGAYYIDSGFKA--AQKFVLRLLESTIHSVL-EKKFISDYKSLLQELVQKKFKTVPKYEL 192 Query 173 ISVEGPHHKKKFIVEAKI--KEYRTLGEGKSKKEAEQRAA 210 GP H + F I K Y L GK+KKEAEQ A Sbjct 193 KKASGPDHDRTFWFSVSINGKVYGPL-SGKTKKEAEQSVA 231 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Geobacillus sp. WCH70] Sequence ID: C5D8T6.1 Length: 246 Range 1: 20 to 234 Score:105 bits(261), Expect:2e-26, Method:Compositional matrix adjust., Identities:72/221(33%), Positives:112/221(50%), Gaps:21/221(9%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQYS 59 +L+KK+G F ++ LL +A TH SY + E E LEFLGDA++ + L + Sbjct 20 ELQKKIGIFFTNEKLLIQAFTHSSYVNEHRRRPHEDNERLEFLGDAVLELTVSQYLFKKF 79 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALW 113 P+ EG L+ L+A ++ E A L + + + + G+ ++ DVFEA Sbjct 80 PHMSEGELTKLRAAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEAFI 139 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYR 171 A+Y+D G DA + + I I EG D+K+ LQE+ Q+ EY Sbjct 140 GALYLDQGMDA------VMQFLGQTIFPKIDEGAFSHVMDFKSQLQELVQRDGIGVLEYS 193 Query 172 LISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAE 211 ++ +GP H K+F+ + + +G GKSKKEAEQ AA+ Sbjct 194 ILEEKGPAHNKEFVSRVSLNGQELGIGVGKSKKEAEQHAAQ 234 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Roseobacter denitrificans OCh 114] Sequence ID: Q16AI6.1 Length: 228 Range 1: 7 to 201 Score:104 bits(259), Expect:2e-26, Method:Compositional matrix adjust., Identities:63/200(32%), Positives:105/200(52%), Gaps:13/200(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYET--LEFLGDALVNFFIVDLLVQYSPN 61 L+ +K+LG+ F +LL +A+TH S S + +EFLGD ++ + + L++ N Sbjct 7 LKSFQKRLGHQFNQPALLAQAVTHASMSTANRGDNQRMEFLGDRVLGLVMAEALLRLDNN 66 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAA 115 EG L+P L+ +E +A++++L +R+ R G+ + ++GD EA+ AA Sbjct 67 ATEGQLAPRFNALVRKETCADVAREIDLGAVLRLGRSEMLSGGRRKQALLGDAIEAVIAA 126 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 VY D+G DA R L +L+ + + ++ R D KT LQE Q R + P Y +S Sbjct 127 VYQDAGFDA--ARALILRLWGDRVHEVEEDAR---DPKTALQEWAQARGLQPPRYEEVSR 181 Query 176 EGPHHKKKFIVEAKIKEYRT 195 +GP H F + +I T Sbjct 182 KGPDHAPIFTISVRISTGET 201 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chloroflexus aggregans DSM 9485] Sequence ID: B8GAM6.1 Length: 229 Range 1: 5 to 211 Score:104 bits(259), Expect:3e-26, Method:Compositional matrix adjust., Identities:66/212(31%), Positives:113/212(53%), Gaps:19/212(8%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVS-YSKKEHY-------ETLEFLGDALVNFFIVDLL 55 L +LE+ LG TF+D+ LL+ AL H S ++++ H E LEFLGD++++F L Sbjct 5 LAELERALGITFRDRKLLQTALMHRSLFNEQPHLLSNLSDNERLEFLGDSVLHFVTTTWL 64 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVF 109 Q P++ E L+ +A L+S + A L L ++ + RG + ++ D+F Sbjct 65 FQQFPHQNESTLTSWRAALVSTKGLAECAATLNLGQYAFLSRGEDTPKGRQRSKLLADLF 124 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 EA+ A+Y+D G +A F + F + + ++ + D T LQEI Q R K+ P+ Sbjct 125 EAVIGAIYLDQGLEAA---RAFIEPFLHERIGTLQTAVL--DPTTRLQEIVQSRHKQLPK 179 Query 170 YRLISVEGPHHKKKFIVEAKIKEYRTLGEGKS 201 Y LI GP H++++++ ++ + G G S Sbjct 180 YYLIDERGPDHQREYVMAVTVEGHEYTGTGPS 211 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Photobacterium profundum SS9] Sequence ID: Q6LMS2.1 Length: 224 Range 1: 7 to 223 Score:103 bits(258), Expect:3e-26, Method:Compositional matrix adjust., Identities:74/221(33%), Positives:123/221(55%), Gaps:12/221(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +L+++LGY F L+ +LTH S + K H E LEFLGD++++F I D L P+ EG Sbjct 7 RLQRRLGYQFNSSELMTLSLTHRSANGK-HNERLEFLGDSILSFVIADDLYHRFPHVDEG 65 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYID 119 +S ++A L+ + L ++ EL ++ + G++ ++I+ D EA+ A+Y+D Sbjct 66 DMSRMRATLVRGKTLAELGREFELGDYLLLGPGELKSGGFRRDSILADCVEAIIGAIYLD 125 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 S D R++ ++ L I+ G +KD KT LQE Q R P Y + V G Sbjct 126 S--DTEQVRKVILSWYQSR-LETIQPGINQKDPKTRLQECLQGRRLALPAYTVTKVHGEA 182 Query 180 HKKKFIVEAKIK--EYRTLGEGKSKKEAEQRAAEELIKLLE 218 H ++F V+ ++ + +G+G S+++AEQ AAE +K LE Sbjct 183 HNQEFTVQCEVTGLDKPVIGKGSSRRKAEQAAAELALKQLE 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Brucella canis ATCC 23365] Sequence ID: A9MA35.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Brucella suis ATCC 23445] Sequence ID: B0CKY7.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Brucella abortus S19] Sequence ID: B2SAD9.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Brucella melitensis ATCC 23457] Sequence ID: C0RI03.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Brucella melitensis bv. 1 str. 16M] Sequence ID: P66664.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Brucella suis 1330] Sequence ID: P66665.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Brucella abortus 2308] Sequence ID: Q2YN02.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Brucella abortus bv. 1 str. 9-941] Sequence ID: Q57E81.1 Length: 245 Range 1: 22 to 233 Score:104 bits(259), Expect:4e-26, Method:Compositional matrix adjust., Identities:71/217(33%), Positives:114/217(52%), Gaps:14/217(6%) Query 7 LEKKLGYTFKDKSLLEKALTH--VSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LE++ G+ F + LE+ALTH V + +YE LEFLGD ++ + ++L + P E Sbjct 22 LEERTGHRFLNLKRLERALTHSSVQAPARANYERLEFLGDRVLGLTVAEMLFEAFPEASE 81 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG--KINE----TIIGDVFEALWAAVYI 118 G LS L++ E +A ++ L I +N+ + DV EAL A +Y+ Sbjct 82 GELSVRLNALVNAETCAAIADEIGLADLIHTGSDIKSLNDKRLLNVRADVVEALIATIYL 141 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 D G +A R + +K+ +++ G ++D KT LQE ++ P Y ++S GP Sbjct 142 DGGLEA--ARSFIQRYWKK---RSLETGAARRDAKTELQEWAHQQGNVHPVYAILSRSGP 196 Query 179 HHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 H F+VE +K + GEG+SK+ AEQ AAE ++ Sbjct 197 DHDPLFLVEVTVKGFAPEKGEGRSKRIAEQSAAEAML 233 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bradyrhizobium diazoefficiens USDA 110] Sequence ID: O69161.2 Length: 250 Range 1: 25 to 239 Score:104 bits(259), Expect:4e-26, Method:Compositional matrix adjust., Identities:71/220(32%), Positives:113/220(51%), Gaps:17/220(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQYSPN 61 LE ++G++F D +LL + +THVS K + Y+ LEFLGD ++ + D+L PN Sbjct 25 LEARIGHSFADPNLLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAFPN 84 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAA 115 EG LS A L+ +E +A+ L L I++ ++ ++++GD+ EA+ A Sbjct 85 ADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVIGA 144 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 +++D G A E + + E + K R +D KT+LQE Q + P YR + Sbjct 145 IFLDGGHAA--AAEFVKRNWTERMH---KPRRPLRDPKTVLQEWAQGKGLPTPVYREVER 199 Query 176 EGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELI 214 GPHH +F V + G G SK+ AE+ AA +I Sbjct 200 TGPHHDPQFRVAVDLPGLAPAEGIGGSKRAAEKVAASVMI 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pediococcus pentosaceus ATCC 25745] Sequence ID: Q03FX0.1 Length: 232 Range 1: 1 to 228 Score:103 bits(258), Expect:4e-26, Method:Compositional matrix adjust., Identities:75/235(32%), Positives:121/235(51%), Gaps:27/235(11%) Query 3 MLEQLEKKLGYTF----KDKSLLEKALTHVSYSKKEH-------YETLEFLGDALVNFFI 51 M++ LE L TF + +LL++A T SY EH YE +EFLGDA++ + Sbjct 1 MIKALEDDLSQTFDIHFNNHALLDEAFTQASYVN-EHPHQELKFYERIEFLGDAVLQLIV 59 Query 52 VDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETII 105 + L + P +G L+ L+A ++ E F+ A++ ++IR+ +G + +++ Sbjct 60 SEYLFKRYPEMPQGKLTRLRAAMVCEASFSDFAKECHFDQYIRLGKGEEKSGARQRSSLL 119 Query 106 GDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKR 163 D+FE+ A+Y+D GR A E F ++ I + EG+ D+K+ LQE+ QK Sbjct 120 CDIFESFIGALYLDQGRAA---VERFVRIV---IFPKLDEGKFDHIIDHKSELQELLQKN 173 Query 164 WKERPEYRLISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLL 217 +Y L+S EGP + F V + G G SKK AEQ AA + ++LL Sbjct 174 GDVEIDYELVSEEGPENDLIFTVSVTADHKKLATGTGHSKKVAEQNAANQALQLL 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Wolbachia sp. wRi] Sequence ID: C0R4Q8.1 Length: 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Wolbachia endosymbiont of Drosophila melanogaster] Sequence ID: Q73FT3.1 Length: 232 Range 1: 1 to 223 Score:103 bits(258), Expect:4e-26, Method:Compositional matrix adjust., Identities:76/228(33%), Positives:118/228(51%), Gaps:19/228(8%) Query 1 MKML-EQLEKKLGYTFKDKSLLEKALTHVSYSKKEH------YETLEFLGDALVNFFIVD 53 MK L + + K + Y F + ++LE+ALTH S +K+ YE LEFLGD+++N + Sbjct 1 MKSLNDAISKIIDYKFTNYAILEEALTHPSVNKRNSKNQIVSYERLEFLGDSVLNMVVSA 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGD 107 L + P ++EG L+ K L+ +A++++L FI R G+ N + + Sbjct 61 TLFKLFPEEKEGALAKRKTDLVCGNTIANVAKEIKLGSFIIMNNSERCNGGRCNLKNLEN 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKER 167 EAL A+YID G + E F + E + + + +D KT LQE TQK Sbjct 121 SLEALIGAIYIDGGLE---NVEKFIIQYWEKLAKGMLDP--PQDPKTSLQEWTQKNKLPL 175 Query 168 PEYRLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELI 214 PEY L+ GP H +F + I++Y + SKK AEQ+AAE ++ Sbjct 176 PEYELVKQTGPAHNPEFTISVCIEDYGKVSACASSKKIAEQKAAELML 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Lactococcus lactis subsp. cremoris MG1363] Sequence ID: A2RLZ8.1 Length: 231 Range 1: 2 to 225 Score:103 bits(258), Expect:4e-26, Method:Compositional matrix adjust., Identities:75/231(32%), Positives:118/231(51%), Gaps:23/231(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDL 54 +K+ ++L+ G F D+ LL+ A TH S++ +E + E LEFLGD ++ I D Sbjct 2 LKLQKKLKNDYGLVFNDEYLLKTAFTHSSFTNEERLPKIANNERLEFLGDVALSLVISDY 61 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L + P K EG LS +++ ++ E ++ +F+R+ G+ ET + ++ Sbjct 62 LYRTYPEKLEGELSKMRSSIVRTESLANFSRSCGFGEFLRLGHGEEKMGGRDRETTLENL 121 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKE 166 FEA A++ID G D K + ++ +K K DYKT LQE+ Q + Sbjct 122 FEAFLGALFIDQGMDE------VRKFIQHVVIPHVKNDDYVKVIDYKTELQEVLQIGGET 175 Query 167 RPEYRLISVEGPHHKKKFIVEAKIKEYRTLGE--GKSKKEAEQRAAEELIK 215 Y+++ EGP H + F+ A + LG GKSKK AEQ+AAE IK Sbjct 176 TISYKILKEEGPAHDRSFVA-AVFNNGKELGRGLGKSKKVAEQKAAENAIK 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Buchnera aphidicola BCc] Sequence ID: Q057R4.1 Length: 226 Range 1: 5 to 224 Score:102 bits(255), Expect:8e-26, Method:Compositional matrix adjust., Identities:71/224(32%), Positives:121/224(54%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++++L+K +GYTF + +LL+ ALTH S S +H E LEFLGD++++F I L + P Sbjct 5 VMKKLQKFIGYTFTNITLLKHALTHRSASS-QHNERLEFLGDSILSFIIAKALYHHFPKM 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGK------INETIIGDVFEALWAAV 116 EG +S ++A L+ +A + L K++++ +G+ E+I+ + EA+ A++ Sbjct 64 NEGGMSRMRATLVRGNTLAEIATEFSLGKYLQLGQGEKKSGGFKRESILANAIEAIIASI 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS +T E + ++ + KKD KT LQE Q + P Y + + Sbjct 124 FLDSNI---YTVERIILYWYKNRFKKMNPTGTKKDPKTRLQEYLQSKHFSLPIYSIGQIY 180 Query 177 GPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLLE 218 G H + F + KI L G G S+++AEQ AA+ + LE Sbjct 181 GEAHNQIFTIYCKIDGLSELLIGIGASRRKAEQDAAQNALIRLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cytotoxicus NVH 391-98] Sequence ID: A7GRH9.1 Length: 245 Range 1: 22 to 227 Score:103 bits(256), Expect:1e-25, Method:Compositional matrix adjust., Identities:70/212(33%), Positives:105/212(49%), Gaps:21/212(9%) Query 7 LEKKLGYTFKDKSLLEKALTHVSY----SKKEH--YETLEFLGDALVNFFIVDLLVQYSP 60 ++KLG TF ++ LL +A TH SY KK H E LEFLGDA++ + L Q P Sbjct 22 FQQKLGITFTNEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYP 81 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWA 114 EG L+ L+A ++ E A +L + + + G+ ++ DVFEA Sbjct 82 TMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFEAFIG 141 Query 115 AVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G D F +E+ Y E S + DYK+ LQE+ Q+ EY++ Sbjct 142 ALYLDQGLDTVWGFLKEIVYPKINEGAFSHV------MDYKSQLQELIQRDGSGNIEYQI 195 Query 173 ISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKK 203 + +GP H ++F+ + LG GKSKK Sbjct 196 LQEKGPAHNREFVSRVTLNSVALGLGSGKSKK 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Halalkalibacterium halodurans C-125] Sequence ID: Q9KA05.1 Length: 263 Range 1: 33 to 262 Score:103 bits(257), Expect:1e-25, Method:Compositional matrix adjust., Identities:76/237(32%), Positives:119/237(50%), Gaps:24/237(10%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH-------YETLEFLGDALVNFFIVDL 54 +M ++L + L TF +K LL +A TH SY EH E LEFLGDA++ + Sbjct 33 QMFDELLRTLNLTFANKKLLVQAFTHSSYVN-EHRIQSCKDNERLEFLGDAVLELAVSQY 91 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L + EG ++ L+A ++ E LA++L + + + + G+ ++ DV Sbjct 92 LYKAFEQMSEGDMTKLRASIVCEPSLAQLAEELHFGELVLLGKGEEMTGGRKRPALLADV 151 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKE 166 FE+ A+Y+D G DA Y + I I EG D+K+ LQE Q+ Sbjct 152 FESFVGALYLDQGMDA------VYLFLERTIYPKISEGAFSHMMDFKSQLQEFIQRDNLG 205 Query 167 RPEYRLISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEE-LIKLLEESE 221 Y ++ GP H ++F+ E + E +G G+SKKEAEQ AA++ LI L ++ E Sbjct 206 HIHYEIVQERGPAHNREFVSEVVLNNETLGVGTGRSKKEAEQHAAQQALITLSQKKE 262 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus velezensis FZB42] Sequence ID: A7Z4L3.1 Length: 249 Range 1: 17 to 239 Score:102 bits(254), Expect:2e-25, Method:Compositional matrix adjust., Identities:71/229(31%), Positives:119/229(51%), Gaps:21/229(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDL 54 ++ ++ ++++ F+++ LL +A TH SY + E E LEFLGDA++ I Sbjct 17 IEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISQF 76 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L P EG L+ L+A ++ E LA +L + + + G+ ++ DV Sbjct 77 LFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGDLVLLGKGEEMTGGRKRPALLADV 136 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKE 166 FEA A+Y+D G D + F K++ + I +G D+K+ LQE Q+ K Sbjct 137 FEAFIGALYLDQGLD---PVQQFLKVY---VFPKINDGAFSHVMDFKSQLQEFVQRDGKG 190 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELI 214 EY++++ +GP H ++F +K E +G G+SKKEAEQ AA+E + Sbjct 191 SLEYKILNEKGPAHNREFEALVSLKGEALGIGNGRSKKEAEQHAAQEAL 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Heliomicrobium modesticaldum Ice1] Sequence ID: B0TGW4.1 Length: 235 Range 1: 10 to 228 Score:102 bits(253), Expect:2e-25, Method:Compositional matrix adjust., Identities:67/223(30%), Positives:113/223(50%), Gaps:17/223(7%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYS 59 +L +++G +D + LE ALTH S+ + EH + LEFLGDA++ I + L Sbjct 10 ELARRIGIASEDLATLEMALTHPSFVYENPQAPPEHNQRLEFLGDAVLGLVIGEQLFVRY 69 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALW 113 P EG LS +A ++ E A++L+L ++++ R G+ +I+ D EA+ Sbjct 70 PTWTEGELSRRRAAVVCEANLADGARRLQLGAWLKLGRGEEASGGREKPSILADALEAVI 129 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 A+++ G +A R LF + + +A + V D KT QE Q+ Y ++ Sbjct 130 GAIFLSGGIEA--ARRFIVDLFGDALANA--QNLVSGDNKTAFQEWVQRTGPADIRYCIV 185 Query 174 SVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIK 215 GP H K+F+ + G+G++KKEAEQ+AA ++ Sbjct 186 DESGPDHDKRFVAAVMVNGTVIADGQGRTKKEAEQQAAGRAMR 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus licheniformis DSM 13 = ATCC 14580] Sequence ID: Q65JQ5.1 Length: 249 Range 1: 22 to 243 Score:102 bits(253), Expect:3e-25, Method:Compositional matrix adjust., Identities:72/228(32%), Positives:118/228(51%), Gaps:21/228(9%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYET---LEFLGDALVNFFIVDLLVQYS 59 + ++++ F+++ LL +A TH SY +K+ YE LEFLGDA++ I L Sbjct 22 KFQERISVQFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISQFLYAKY 81 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALW 113 P EG L+ L+A ++ E LA +L + + + + G+ ++ DVFEA Sbjct 82 PAMSEGDLTKLRAAIVCEPSLVSLAHELSFGELVLLGKGEEMTGGRKRPALLADVFEAFI 141 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYR 171 A+Y+D G +A T K + I +G D+K+ LQE Q+ + EY+ Sbjct 142 GALYLDQGLEAVVT------FLKAYVFPKIDDGAFSHVMDFKSQLQEFVQRDGRGILEYK 195 Query 172 LISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLE 218 ++ +GP H ++F +K E +G G+SKKEAEQ AA+E + L+ Sbjct 196 ILQEKGPAHNREFEANVSLKGEVLGVGSGRSKKEAEQHAAQEALAKLQ 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Serratia proteamaculans 568] Sequence ID: A8GI25.1 Length: 226 Range 1: 5 to 209 Score:101 bits(251), Expect:3e-25, Method:Compositional matrix adjust., Identities:69/209(33%), Positives:112/209(53%), Gaps:12/209(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF+ + LL +ALTH S S K H E LEFLGD++++F I + L Q P Sbjct 5 VINRLQRKLGYTFQQQELLLQALTHRSASSK-HNERLEFLGDSILSFVIANALFQRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ + ++ +L + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAEMGREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D L ++ L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIQTVERLILDWYRSR-LDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKK 203 G H ++F + ++ +G G S++ Sbjct 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ruegeria pomeroyi DSS-3] Sequence ID: Q5LNK5.1 Length: 225 Range 1: 7 to 225 Score:101 bits(251), Expect:3e-25, Method:Compositional matrix adjust., Identities:68/224(30%), Positives:115/224(51%), Gaps:14/224(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTH--VSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 ++ E +LGY+F+ LL +ALTH +S S ++ + LEFLGD ++ + L++ + Sbjct 7 MKAFEARLGYSFERPELLVRALTHGSISSSTRQDNQRLEFLGDRVLGLVMATALLEADKD 66 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAA 115 EG L+P L+ +E +A++ +L +++ R G+ ++GD EA+ AA Sbjct 67 ATEGQLAPRFNALVRKETCAEVAREADLGAVLKLGRSEMMSGGRRKLALLGDAMEAVIAA 126 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 VY D G A + +L+ + + R D KT LQE Q R + P Y L+ Sbjct 127 VYRDGGFAA--AEAVILRLWGARVHQVEADAR---DAKTALQEWAQARGQTPPRYELVKR 181 Query 176 EGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLLE 218 GP H F + A++ + R +K++AEQ AA +L+ L+ Sbjct 182 SGPDHAPVFTILAELADGRRAEATAGAKRQAEQAAARKLLDSLD 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus AH187] Sequence ID: B7HLI2.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus Q1] Sequence ID: B9IVD8.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus ATCC 10987] Sequence ID: Q732M1.1 Length: 245 Range 1: 22 to 243 Score:101 bits(252), Expect:4e-25, Method:Compositional matrix adjust., Identities:79/228(35%), Positives:118/228(51%), Gaps:21/228(9%) Query 7 LEKKLGYTFKDKSLLEKALTHVSY----SKKEH--YETLEFLGDALVNFFIVDLLVQYSP 60 ++K+G TF D+ LL +A TH SY KK H E LEFLGDA++ + L Q P Sbjct 22 FQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYP 81 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWA 114 EG L+ L+A ++ E A +L + + + G+ ++ DVFEA Sbjct 82 TMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFEAFIG 141 Query 115 AVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G + F +E+ Y E S + DYK+ LQE+ Q+ EY++ Sbjct 142 ALYLDQGLETVWGFLKEIVYPKINEGAFSHV------MDYKSQLQELIQRDGSGNIEYQI 195 Query 173 ISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLEE 219 + +GP H ++F+ + LG GKSKKEAEQ+AA E +K L+E Sbjct 196 LQEKGPAHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKE 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chromobacterium violaceum ATCC 12472] Sequence ID: Q7NWC4.1 Length: 236 Range 1: 10 to 227 Score:101 bits(251), Expect:4e-25, Method:Compositional matrix adjust., Identities:77/222(35%), Positives:123/222(55%), Gaps:12/222(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 +L + L Y F+ LL +ALTH SYS + E EF+GD+++N+ + +L P EG Sbjct 10 RLSQALDYAFQKPELLRQALTHRSYSSANN-ERFEFVGDSILNYTVARMLYDQFPQLTEG 68 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFI-----RIKRGKINE-TIIGDVFEALWAAVYID 119 LS L+A L+++ +A +L+L ++ +K G N +I+ D EA +AAV D Sbjct 69 ELSRLRANLVNQNTLAEIAHELKLGDYLYLGEGELKSGGFNRPSILADALEATFAAVSFD 128 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 + D ++ +L+ + + + I R KD KT LQE Q R P+YR++S G Sbjct 129 A--DFAAAEQVVRRLYNQRV-ATIDTTRQAKDAKTRLQEALQARKLALPKYRILSQSGEA 185 Query 180 HKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLEE 219 H++ F VE + E + G+G S++ AEQ+AAE + LLE+ Sbjct 186 HEQWFKVECDLGEMALISTGDGGSRRAAEQQAAEAALTLLEQ 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus AH820] Sequence ID: B7JJT6.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus 03BB102] Sequence ID: C1EP73.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus anthracis str. CDC 684] Sequence ID: C3L778.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus anthracis str. A0248] Sequence ID: C3P5Q0.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [[Bacillus thuringiensis] serovar konkukian str. 97-27] Sequence ID: Q6HEW6.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus anthracis] Sequence ID: Q81WI8.1 Length: 245 Range 1: 22 to 243 Score:101 bits(251), Expect:5e-25, Method:Compositional matrix adjust., Identities:79/228(35%), Positives:118/228(51%), Gaps:21/228(9%) Query 7 LEKKLGYTFKDKSLLEKALTHVSY----SKKEH--YETLEFLGDALVNFFIVDLLVQYSP 60 ++K+G TF D+ LL +A TH SY KK H E LEFLGDA++ + L Q P Sbjct 22 FQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYP 81 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWA 114 EG L+ L+A ++ E A +L + + + G+ ++ DVFEA Sbjct 82 TMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFEAFIG 141 Query 115 AVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G + F +E+ Y E S + DYK+ LQE+ Q+ EY++ Sbjct 142 ALYLDQGLETVWGFLKEIVYPKINEGAFSHV------MDYKSQLQELIQRDGSGNIEYQI 195 Query 173 ISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLEE 219 + +GP H ++F+ + LG GKSKKEAEQ+AA E +K L+E Sbjct 196 LQEKGPAHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKE 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus E33L] Sequence ID: Q636H7.1 Length: 245 Range 1: 22 to 243 Score:101 bits(251), Expect:5e-25, Method:Compositional matrix adjust., Identities:79/228(35%), Positives:118/228(51%), Gaps:21/228(9%) Query 7 LEKKLGYTFKDKSLLEKALTHVSY----SKKEH--YETLEFLGDALVNFFIVDLLVQYSP 60 ++K+G TF D+ LL +A TH SY KK H E LEFLGDA++ + L Q P Sbjct 22 FQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYP 81 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWA 114 EG L+ L+A ++ E A +L + + + G+ ++ DVFEA Sbjct 82 TMSEGELTKLRAAIVCEPSLVRFANELSFGGLVLLGKGEEMTGGRERPALLADVFEAFIG 141 Query 115 AVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G + F +E+ Y E S + DYK+ LQE+ Q+ EY++ Sbjct 142 ALYLDQGLETVWGFLKEIVYPKINEGAFSHV------MDYKSQLQELIQRDGSGNIEYQI 195 Query 173 ISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLEE 219 + +GP H ++F+ + LG GKSKKEAEQ+AA E +K L+E Sbjct 196 LQEKGPAHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKE 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus B4264] Sequence ID: B7HDX2.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus G9842] Sequence ID: B7IUK8.1 Length: 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus cereus ATCC 14579] Sequence ID: Q819V8.1 Length: 245 Range 1: 22 to 243 Score:101 bits(251), Expect:6e-25, Method:Compositional matrix adjust., Identities:79/228(35%), Positives:118/228(51%), Gaps:21/228(9%) Query 7 LEKKLGYTFKDKSLLEKALTHVSY----SKKEH--YETLEFLGDALVNFFIVDLLVQYSP 60 ++K+G TF D+ LL +A TH SY KK H E LEFLGDA++ + L Q P Sbjct 22 FQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYP 81 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWA 114 EG L+ L+A ++ E A +L + + + G+ ++ DVFEA Sbjct 82 TMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFEAFIG 141 Query 115 AVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G + F +E+ Y E S + DYK+ LQE+ Q+ EY++ Sbjct 142 ALYLDQGLETVWEFLKEIVYPKINEGAFSHV------MDYKSQLQELIQRDGSGNVEYQI 195 Query 173 ISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLEE 219 + +GP H ++F+ + LG GKSKKEAEQ+AA E +K L+E Sbjct 196 LQEKGPAHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKE 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Nitrobacter winogradskyi Nb-255] Sequence ID: Q3SRB3.1 Length: 266 Range 1: 42 to 236 Score:101 bits(251), Expect:8e-25, Method:Compositional matrix adjust., Identities:62/202(31%), Positives:105/202(51%), Gaps:20/202(9%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSY-----SKKEHYETLEFLGDALVNFFIVDLLVQ 57 ++ +E++LG+TF D SLL A THVS + + Y+ LEFLGD ++ + D+L + Sbjct 42 IMAAIEQRLGHTFADISLLTTAFTHVSALKSSRGRCDSYQRLEFLGDHVLGLVVSDMLYR 101 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEA 111 P EG LS A L+ +E +A+ L+L + +++ ++ +++GD+ EA Sbjct 102 AFPKADEGELSKRLADLVRKETCIDVAKSLDLQEGVKLGAVGAGAGARLRRSVLGDICEA 161 Query 112 LWAAVYIDSG--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 + AVY+D G A F + + ++ + R +D KT+LQE Q + P Sbjct 162 VIGAVYLDGGYAAAAAFVERNWLERMRKPV-------RPLRDPKTVLQEWAQGKGLPTPV 214 Query 170 YRLISVEGPHHKKKFIVEAKIK 191 YR + GPHH +F V ++ Sbjct 215 YREVERTGPHHDPRFRVAVELP 236 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rhodoferax ferrireducens T118] Sequence ID: Q21XN1.1 Length: 228 Range 1: 5 to 222 Score:100 bits(249), Expect:8e-25, Method:Compositional matrix adjust., Identities:79/225(35%), Positives:119/225(52%), Gaps:18/225(8%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L L+ +L + F + LL +ALTH S+S +H E LEFLGD+++ + DLL + Sbjct 5 LMALQARLQHEFSNPGLLTRALTHRSFSL-DHNERLEFLGDSVLGLAVADLLYERLSTLP 63 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVY 117 EG LS ++A L+ ++ + LA L L + IR+ G+ +I+ D EA+ AVY Sbjct 64 EGDLSRVRANLVKQDTLHHLALGLGLPEVIRLGEGEARSGGHKRPSILADALEAVIGAVY 123 Query 118 IDSG--RDANFTRELFYKL-FKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 +D+G R LF + K D+ + + KD KT LQE Q R P YR+++ Sbjct 124 LDAGFAVAQGLVRRLFQAVEIKSDMEA------IGKDPKTELQEWLQGRKMNLPLYRVVA 177 Query 175 VEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQRAAEELIKLL 217 G HK+ F VE +I E L G G S++ EQ AA +++ L Sbjct 178 TLGAAHKQTFDVECEIVELNFLERGIGGSRRAGEQAAAAAMLQTL 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Staphylococcus carnosus subsp. carnosus TM300] Sequence ID: B9DPJ2.1 Length: 242 Range 1: 33 to 233 Score:100 bits(249), Expect:9e-25, Method:Compositional matrix adjust., Identities:65/207(31%), Positives:109/207(52%), Gaps:21/207(10%) Query 20 LLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAY 73 L ++A +H S+ + H E LEFLGDA++ + L P EG L+ ++A Sbjct 33 LYQQAFSHSSFINDFNMDRLAHNERLEFLGDAVLELTVSRYLFDKYPELPEGNLTKMRAT 92 Query 74 LISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSGRDA--N 125 ++ E + A K++L++ I + + G+ +++ D FEA A+Y+D G DA Sbjct 93 IVCEPSLVIFANKIQLNELILLGKGEEKTGGRTRPSLVSDAFEAFVGALYLDQGLDAVWQ 152 Query 126 FTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFI 185 F+ E+ + ++D L + D+KT QE+ + K YRLI +GP H + F Sbjct 153 FSEEVIFPHVEDDELMGV------VDFKTQFQELIHRLSKGNVTYRLIDEQGPAHHRLFT 206 Query 186 VEAKIK-EYRTLGEGKSKKEAEQRAAE 211 E ++ E G+G++KKE+EQ+AAE Sbjct 207 SEVLLEGEPVAKGQGRTKKESEQKAAE 233 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bartonella quintana str. Toulouse] Sequence ID: Q6G082.1 Length: 235 Range 1: 5 to 221 Score:100 bits(249), Expect:9e-25, Method:Compositional matrix adjust., Identities:73/224(33%), Positives:119/224(53%), Gaps:18/224(8%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +++QLE+ + FKD+ L+KALTH S S++ +YE LEFLGD ++ I ++L + P Sbjct 5 IIDQLERLTEHHFKDEERLKKALTHSSVQDSEQGNYERLEFLGDRVLGLLIAEMLYKLFP 64 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALWA 114 EG LS L++ + +A ++ L I + +G+ + DV EAL A Sbjct 65 QASEGELSVRLNGLVNAQTCADIALEMGLPDMIHVGFEMRNLKGRRLTNMHADVIEALIA 124 Query 115 AVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 +Y+D G + F R + K+ + GR +D KT LQE + +P YR+ Sbjct 125 VMYLDGGLKSVRPFIRRYWQSRAKQ-----MDAGR--RDAKTELQEWAHVQGGVQPHYRV 177 Query 173 ISVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIK 215 + GP H F+VE I + +G+G SK+ AE+ AAE++++ Sbjct 178 VKRSGPDHDPVFMVEVSILGFAPEIGQGNSKRCAERMAAEKVLR 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Cereibacter sphaeroides ATCC 17025] Sequence ID: A4WVP5.1 Length: 229 Range 1: 7 to 214 Score:100 bits(248), Expect:1e-24, Method:Compositional matrix adjust., Identities:68/219(31%), Positives:110/219(50%), Gaps:21/219(9%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSK--KEHYETLEFLGDALVNFFIVDLLVQYSPN 61 L E ++G+ F++ L +A+TH S S + + LEFLGD ++ + + L+ Sbjct 7 LRAFESRIGHAFREPDRLLRAVTHASLSSATRPDNQRLEFLGDRVLGLVMAEALLAADKA 66 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAA 115 EG L+P L+ +E +A+++ L +++ R G+ E ++GD EA+ AA Sbjct 67 ATEGQLAPRFNALVRKETCAAVAREVGLGDVLKLGRSEMMSGGRRKEALLGDALEAVIAA 126 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 VY+D+G +A R L +L+ E I + R D KT LQE Q R P Y + Sbjct 127 VYLDAGFEA--ARRLVLRLWGERIAQVEADAR---DAKTALQEWAQARGLPPPCYEAVDR 181 Query 176 EGPHHKKKFIVEAKIKEYRTLGEGKSKKEAE--QRAAEE 212 GP H F VE + LG G++++ A +R AE+ Sbjct 182 SGPDHAPIFTVEVR------LGNGETERSAAGTKRVAEQ 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ligilactobacillus salivarius UCC118] Sequence ID: Q1WUA0.1 Length: 232 Range 1: 7 to 230 Score:100 bits(248), Expect:1e-24, Method:Compositional matrix adjust., Identities:66/230(29%), Positives:121/230(52%), Gaps:23/230(10%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSY--------SKKEHYETLEFLGDALVNFFIVDLLV 56 E L++ TFKD LL+ A TH SY K ++YE +EFLGDA++ + + + Sbjct 7 EMLKRDFNITFKDVDLLDAAFTHASYVNETPERKKKLKYYERIEFLGDAVMQLCVSEYIY 66 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFE 110 ++ P EG +S L+A ++ + F+ A + +++IR+ +G + +++ D+FE Sbjct 67 EHYPEMPEGKMSRLRAAMVRADSFSKFAIECHFNEYIRLGKGEEKGNARQRPSLLCDIFE 126 Query 111 ALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERP 168 + A+Y+D G+D + + I ++ G D KT LQE+ Q+ + + Sbjct 127 SFIGALYLDQGKDE------VVRFISKVIFPKLELGWFDHMMDNKTELQEVLQQNGECKI 180 Query 169 EYRLISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEELIKLL 217 +Y ++V GP +++ + + + E G G++KK AEQ AA + +K L Sbjct 181 KYNEVNVTGPDNERVYTMNVVVNNEVMGEGTGRTKKAAEQMAAYQALKKL 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Onion yellows phytoplasma OY-M] Sequence ID: Q6YPW7.1 Length: 238 Range 1: 1 to 204 Score:100 bits(248), Expect:1e-24, Method:Compositional matrix adjust., Identities:72/213(34%), Positives:115/213(53%), Gaps:21/213(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSK-----KEHYETLEFLGDALVNFFIVDLL 55 MK ++ L + L T ++ +L ++ALTH SYS +E E LEFLGDA+V + D L Sbjct 1 MKNIQTLFQTLNITPQNLTLYKQALTHSSYSNEQNPPQEDNERLEFLGDAIVGLLMADYL 60 Query 56 VQYSPNKR-EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKIN-----ETIIGDVF 109 YS +K EG ++ +A + E + A +EL ++ + +G+ N ++II D F Sbjct 61 --YSQSKEDEGIMTKKRAQAVCERSLTIYAHNIELQNYLLLGKGEKNKDFNAKSIIADTF 118 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 EAL+ A+Y+D G T + K+F +L + + D+KT LQEI Q K+ + Sbjct 119 EALFGAIYLDLGY---LTAK---KVFHNIVLPHLAKTIYIIDFKTQLQEIVQSE-KKTIQ 171 Query 170 YRLISVEGPHHKKKFIVEAKI-KEYRTLGEGKS 201 Y+++ +GP H K F+ E + K GEG + Sbjct 172 YKIVQEQGPAHSKNFVAEVYLEKNLLGTGEGST 204 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rhizobium leguminosarum bv. trifolii WSM2304] Sequence ID: B5ZW73.1 Length: 239 Range 1: 14 to 226 Score:100 bits(248), Expect:1e-24, Method:Compositional matrix adjust., Identities:72/218(33%), Positives:111/218(50%), Gaps:14/218(6%) Query 6 QLEKKLGYTFKDKSLLEKALTHVS--YSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +LE +G+ F +K L++ALTH S K +YE LEFLGD ++ I +LL + Sbjct 14 KLEGLIGHDFAEKERLDRALTHASARTEKGGNYERLEFLGDRVLGLCIAELLFRTFGTAG 73 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALWAAVY 117 EG LS L+S E +A +L LH +IR GK + DV E+L AA+Y Sbjct 74 EGELSVRLNQLVSAETCAAVADELNLHLYIRTGADVKKLTGKRMMNVRADVVESLIAAIY 133 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G + R + ++ A++ K+D KT LQE + ++ P YR+ G Sbjct 134 LDGGLE--VARRFILRYWQG---RAVRADGAKRDAKTELQEWSHAKFGVTPNYRVDERSG 188 Query 178 PHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 P H +F V ++ + G +SK+ AEQ AA +++ Sbjct 189 PDHDPRFKVTVEVAGIKPETGVERSKRAAEQVAATKML 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Agrobacterium vitis S4] Sequence ID: B9JUN7.1 Length: 239 Range 1: 13 to 226 Score:100 bits(248), Expect:1e-24, Method:Compositional matrix adjust., Identities:74/219(34%), Positives:112/219(51%), Gaps:14/219(6%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 E++E +GY F K L+KALTH S +K YE LEFLGD ++ + + L + Sbjct 13 EKVEAVIGYHFIGKERLDKALTHSSARPAKGSDYERLEFLGDRVLGLCVAEHLFKVFRAA 72 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG--KINE----TIIGDVFEALWAAV 116 EG LS L+S E +A +++LH++IR K+ + + DV E+L AA+ Sbjct 73 TEGELSVRLNQLVSAETCAAVADEIQLHRYIRTGADVKKLTDKNMLNVRADVVESLIAAI 132 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 Y+D+G +A R K + E A ++ ++D KT LQE ++ P YR+ Sbjct 133 YLDAGLEA--ARAFVLKFWAE---RASRQDAGRRDAKTELQEWAHAKFAVTPVYRVADRS 187 Query 177 GPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 GP H F V +I + G +SK+ AEQ AA L+ Sbjct 188 GPDHDPSFTVTVEIGKLEPETGIDRSKRAAEQAAATRLL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Methylocella silvestris BL2] Sequence ID: B8EK13.1 Length: 235 Range 1: 7 to 213 Score:99.8 bits(247), Expect:2e-24, Method:Compositional matrix adjust., Identities:66/212(31%), Positives:108/212(50%), Gaps:13/212(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYS--KKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 L LE ++G+ F L+E ALTHVS + K+ Y+ LEFLGD ++ + ++L P+ Sbjct 7 LSALEARIGHRFSAADLIEAALTHVSAAQGKRVSYQRLEFLGDRVLGVVVANMLYGAFPD 66 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI-----KRGKINETIIGDVFEALWAAV 116 EG LS A L+ +E +A + + ++R+ + +N I+GDV E++ AV Sbjct 67 ADEGELSRRLADLVRKESCAEVALEWGVEAYVRVGESEKQNASVNRAILGDVCESIIGAV 126 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++D G + + + F+ + S R +D KT LQE Q R P YR + Sbjct 127 FLDGGFAP--AQRVVTQAFEPRMRSPR---RPLRDPKTTLQEWAQARGLPPPSYRETART 181 Query 177 GPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQ 207 GP H +F + +I ++ G +K+ AEQ Sbjct 182 GPDHAPEFTISVEIAGFQQAEARGFAKRLAEQ 213 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Yersinia pestis Pestoides F] Sequence ID: A4TKX8.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Yersinia pseudotuberculosis IP 31758] Sequence ID: A7FFT9.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Yersinia pestis Angola] Sequence ID: A9R402.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Yersinia pestis Antiqua] Sequence ID: Q1C555.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Yersinia pestis Nepal516] Sequence ID: Q1CKE4.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Yersinia pseudotuberculosis IP 32953] Sequence ID: Q667V1.1 Length: 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Yersinia pestis] Sequence ID: Q8ZD72.1 Length: 226 Range 1: 5 to 224 Score:99.4 bits(246), Expect:2e-24, Method:Compositional matrix adjust., Identities:78/224(35%), Positives:126/224(56%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF+ + LL +ALTH S S K H E LEFLGD++++F I + L + P Sbjct 5 VINRLQRKLGYTFQQQELLLQALTHRSASSK-HNERLEFLGDSILSFVIANELYRRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ +L + +R+ G++ E+I+ D EAL V Sbjct 64 DEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D + L + + L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIHTIERLILEWYHSR-LEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEQALKQLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rhizobium etli CIAT 652] Sequence ID: B3PUN8.1 Length: 239 Range 1: 14 to 226 Score:99.4 bits(246), Expect:2e-24, Method:Compositional matrix adjust., Identities:72/218(33%), Positives:111/218(50%), Gaps:14/218(6%) Query 6 QLEKKLGYTFKDKSLLEKALTHVS--YSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +LE +G+ F +K L++ALTH S K +YE LEFLGD ++ I +LL + Sbjct 14 KLESLIGHDFAEKERLDRALTHASARTEKGSNYERLEFLGDRVLGLCIAELLFRTFGTAG 73 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALWAAVY 117 EG LS L+S E +A +L LH +IR GK + DV E+L AA+Y Sbjct 74 EGELSVRLNQLVSAETCAAVADELNLHLYIRTGADVKKLTGKRMMNVRADVVESLIAAIY 133 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G + R + ++ A++ K+D KT LQE + ++ P YR+ G Sbjct 134 LDGGLE--VARRFILRYWQG---RAVRADGAKRDAKTELQEWSHAKFGVTPLYRVDERSG 188 Query 178 PHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 P H +F V ++ + G +SK+ AEQ AA +++ Sbjct 189 PDHDPRFKVTVEVAGIKPETGVERSKRAAEQVAATKML 226 >RecName: Full=Ribonuclease 3 1; AltName: Full=Ribonuclease III 1; Short=RNase III 1 [Synechocystis sp. PCC 6803 substr. Kazusa] Sequence ID: P74368.1 Length: 231 Range 1: 11 to 227 Score:99.0 bits(245), Expect:3e-24, Method:Compositional matrix adjust., Identities:73/220(33%), Positives:118/220(53%), Gaps:22/220(10%) Query 17 DKSLLEKALTHVSYSKKEH-----YETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLK 71 D L +ALTH SY EH Y+ LEFLGDA++ F + +L + P+ E L+ L+ Sbjct 11 DPQLKLEALTHRSYCN-EHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHFTEAELTRLR 69 Query 72 AYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSGRDA- 124 + L+++ LA+ L + IR+ + G+ + +I+ DVFE+L A +D G A Sbjct 70 SQLVNQNQLAYLARFLHIAPEIRLSQSLARDDGQSSPSILADVFESLLGAALLDRGLTAV 129 Query 125 -NFTRELFYKLFKEDILSAIKEGRVKK-----DYKTILQEITQKRWKERPEYRLISVEGP 178 +F +ELF + ++ ++GR K D K++LQ+ + K+ PEY LI+ GP Sbjct 130 EDFIQELFVPILEQ--WEKSQDGRSPKLVPTMDVKSMLQQWALAKTKQLPEYELINTSGP 187 Query 179 HHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 H ++F K+ + G G SK+ A ++AA E +K L Sbjct 188 PHAQEFTFTVKVAGKIHGQGSGPSKQIATKQAALEALKSL 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus mycoides KBAB4] Sequence ID: A9VT87.1 Length: 245 Range 1: 22 to 243 Score:99.4 bits(246), Expect:3e-24, Method:Compositional matrix adjust., Identities:77/228(34%), Positives:119/228(52%), Gaps:21/228(9%) Query 7 LEKKLGYTFKDKSLLEKALTHVSY----SKKEH--YETLEFLGDALVNFFIVDLLVQYSP 60 ++++G TF D+ LL +A TH SY KK H E LEFLGDA++ + L Q P Sbjct 22 FQEEIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYP 81 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWA 114 EG L+ L+A ++ E A ++ + + + G+ ++ DVFEA Sbjct 82 TMSEGELTKLRAAIVCEPSLVRFANEMSFGSLVLLGKGEEMTGGRERPALLADVFEAFIG 141 Query 115 AVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G + + +E+ Y E S + DYK+ LQE+ Q+ EY++ Sbjct 142 ALYLDQGLETVWGYLKEVVYPKINEGAFSHV------MDYKSQLQELIQRDGSGNVEYQI 195 Query 173 ISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 + +GP H ++F+ + E LG GKSKKEAEQ+AA E +K L+E Sbjct 196 LQEKGPAHNREFVSRVTLNNEALGLGSGKSKKEAEQQAAAEALKKLKE 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chloroflexus aurantiacus J-10-fl] Sequence ID: A9WJ69.1 Length: 244 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chloroflexus aurantiacus Y-400-fl] Sequence ID: B9LB70.1 Length: 244 Range 1: 5 to 212 Score:99.4 bits(246), Expect:3e-24, Method:Compositional matrix adjust., Identities:62/213(29%), Positives:112/213(52%), Gaps:19/213(8%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVS-YSKKEHY-------ETLEFLGDALVNFFIVDLL 55 L +LE+ +G TF+D++LL+ A H S ++++ H E LEFLGD++++F L Sbjct 5 LAELERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTDNERLEFLGDSVLHFVTTTWL 64 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKIN------ETIIGDVF 109 + P++ E L+ +A L+S + A + L ++ + RG+ N + ++ D+F Sbjct 65 FETFPDQDEATLTNWRAALVSTKGLAECAAQFNLGQYAYLSRGEDNPGGRSRQKLLADLF 124 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 EAL A+Y+D G + R ++ I I + D T LQE+ Q R+K+ P+ Sbjct 125 EALVGAIYLDQGLET--ARAFIVPFWQARIEQIIH---IDLDPTTRLQELMQARFKQLPD 179 Query 170 YRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSK 202 Y + GP H++++++ + + G G SK Sbjct 180 YSIEEERGPEHQREYVMAVTVAGRKFTGSGSSK 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Neisseria gonorrhoeae NCCP11945] Sequence ID: B4RJT7.1 Length: 239 Range 1: 14 to 201 Score:99.0 bits(245), Expect:3e-24, Method:Compositional matrix adjust., Identities:64/192(33%), Positives:103/192(53%), Gaps:10/192(5%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 ++KKLGY F+D SLL +ALTH S+ K H E EF+GD+++N+ + +L P EG Sbjct 14 IQKKLGYAFRDMSLLRRALTHRSHHAK-HNERFEFVGDSILNYTVARMLFDAFPKLTEGE 72 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVYIDS 120 LS L+A L++E +A ++ + + + G++ +I+ D EA++AAV D+ Sbjct 73 LSRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELKSGGFRRPSILADAMEAMFAAVSFDA 132 Query 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 D N ++ LF E + A + + KD KT LQE Q R P+YR+ G + Sbjct 133 --DFNTAEKVVRHLFAERVRRADFQNQA-KDGKTALQEALQARRFALPKYRIEEQIGHAN 189 Query 181 KKKFIVEAKIKE 192 F++ + E Sbjct 190 DSMFVISCDLGE 201 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Alkalihalobacillus clausii KSM-K16] Sequence ID: Q5WFM6.1 Length: 260 Range 1: 31 to 244 Score:99.4 bits(246), Expect:3e-24, Method:Compositional matrix adjust., Identities:68/220(31%), Positives:112/220(50%), Gaps:21/220(9%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHY------ETLEFLGDALVNFFIVDLL 55 K + L + G TF+++ LL +A TH SY ++ E LEFLGDA++ + L Sbjct 31 KQFDDLLVRTGLTFENRKLLIQAFTHSSYVNEQRIFSSSDNERLEFLGDAVLELAVSQYL 90 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVF 109 + N EG ++ L+A ++ E A++L+ K + + G+ ++ DVF Sbjct 91 FKTYKNMSEGDMTKLRASIVCEPSLARFAEELQFGKLVLLGKGEEVTGGRTRPALLADVF 150 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRV--KKDYKTILQEITQKRWKER 167 EA A+Y+D G + F +F F + IKEG K D+K+ LQE Q+ + + Sbjct 151 EAFIGALYMDQGLEPVF---MFLARF---MYPKIKEGAFTYKMDFKSQLQEFVQRDNRGQ 204 Query 168 PEYRLISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAE 206 Y ++ GP H ++F+ + ++ E G G+SKKEAE Sbjct 205 IRYLIVQERGPAHDREFVSDVQLNEETIGTGTGRSKKEAE 244 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Yersinia enterocolitica subsp. enterocolitica 8081] Sequence ID: A1JKK3.1 Length: 226 Range 1: 5 to 224 Score:98.6 bits(244), Expect:4e-24, Method:Compositional matrix adjust., Identities:77/224(34%), Positives:125/224(55%), Gaps:12/224(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 ++ +L++KLGYTF+ + LL +ALTH S S K H E LEFLGD++++F I + L + P Sbjct 5 VINRLQRKLGYTFQQQELLLQALTHRSASSK-HNERLEFLGDSILSFVIANELYRRFPRV 63 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAV 116 EG +S ++A L+ +A++ +L + +R+ G++ E+I+ D EAL + Sbjct 64 DEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGI 123 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 ++DS D + L + L I G +KD KT LQE Q R P Y ++ V Sbjct 124 FLDS--DIHTIERLILAWYHSR-LEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR 180 Query 177 GPHHKKKFIVEAKIKEYR--TLGEGKSKKEAEQRAAEELIKLLE 218 G H ++F + ++ +G G S+++AEQ AAE+ +K LE Sbjct 181 GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEQALKQLE 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rhizobium etli CFN 42] Sequence ID: Q2KAE3.1 Length: 239 Range 1: 14 to 226 Score:98.6 bits(244), Expect:4e-24, Method:Compositional matrix adjust., Identities:72/218(33%), Positives:111/218(50%), Gaps:14/218(6%) Query 6 QLEKKLGYTFKDKSLLEKALTHVS--YSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +LE +G+ F +K L++ALTH S K +YE LEFLGD ++ I +LL + Sbjct 14 KLEALIGHDFAEKERLDRALTHASARTEKGSNYERLEFLGDRVLGLCIAELLFRTFGTAG 73 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALWAAVY 117 EG LS L+S E +A +L LH +IR GK + DV E+L AA+Y Sbjct 74 EGELSVRLNQLVSAETCAAVADELNLHLYIRTGADVKKLTGKRMMNVRADVVESLIAAIY 133 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G + R + ++ A++ K+D KT LQE + ++ P YR+ G Sbjct 134 LDGGLE--VARRFILRYWQG---RAVRADGAKRDAKTELQEWSHAKFGVTPIYRVDERSG 188 Query 178 PHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 P H +F V ++ + G +SK+ AEQ AA +++ Sbjct 189 PDHDPRFRVTVEVAGIKPESGVERSKRAAEQVAATKML 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacillus subtilis subsp. subtilis str. 168] Sequence ID: P51833.2 Length: 249 Range 1: 17 to 243 Score:99.0 bits(245), Expect:4e-24, Method:Compositional matrix adjust., Identities:73/233(31%), Positives:122/233(52%), Gaps:21/233(9%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYET---LEFLGDALVNFFIVDL 54 ++ ++ ++++ F+++ LL +A TH SY +K+ YE LEFLGDA++ I Sbjct 17 VEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISRF 76 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDV 108 L P EG L+ L+A ++ E LA +L + + + G+ ++ DV Sbjct 77 LFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGDLVLLGKGEEMTGGRKRPALLADV 136 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKE 166 FEA A+Y+D G + E F K++ + I +G D+K+ LQE Q+ K Sbjct 137 FEAFIGALYLDQGLE---PVESFLKVY---VFPKINDGAFSHVMDFKSQLQEYVQRDGKG 190 Query 167 RPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLE 218 EY++ + +GP H ++F +K E +G G+SKKEAEQ AA+E + L+ Sbjct 191 SLEYKISNEKGPAHNREFEAIVSLKGEPLGVGNGRSKKEAEQHAAQEALAKLQ 243 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rhizobium leguminosarum bv. viciae 3841] Sequence ID: Q1MJ54.1 Length: 239 Range 1: 14 to 226 Score:98.6 bits(244), Expect:5e-24, Method:Compositional matrix adjust., Identities:72/218(33%), Positives:111/218(50%), Gaps:14/218(6%) Query 6 QLEKKLGYTFKDKSLLEKALTHVS--YSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +LE +G+ F +K L++ALTH S K +YE LEFLGD ++ I +LL + Sbjct 14 KLEGLIGHDFAEKERLDRALTHASARTEKGGNYERLEFLGDRVLGLCIAELLFRTFGTAG 73 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALWAAVY 117 EG LS L+S E +A +L LH +IR GK + DV E+L AA+Y Sbjct 74 EGELSVRLNQLVSAETCAAVADELNLHLYIRTGADVKKLTGKRMMNVRADVVESLIAAIY 133 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 +D G + R + ++ A++ K+D KT LQE + ++ P YR+ G Sbjct 134 LDGGLE--VARRFILRYWQG---RAVRADGAKRDAKTELQEWSHAKFGVTPIYRVDERSG 188 Query 178 PHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 P H +F V ++ + G +SK+ AEQ AA +++ Sbjct 189 PDHDPRFKVTVEVAGIKPETGVERSKRAAEQVAATKML 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Cereibacter sphaeroides ATCC 17029] Sequence ID: A3PGF8.1 Length: 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Cereibacter sphaeroides KD131] Sequence ID: B9KSA7.1 Length: 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Cereibacter sphaeroides 2.4.1] Sequence ID: Q3J5W1.1 Length: 229 Range 1: 7 to 214 Score:98.2 bits(243), Expect:5e-24, Method:Compositional matrix adjust., Identities:67/219(31%), Positives:111/219(50%), Gaps:21/219(9%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSK--KEHYETLEFLGDALVNFFIVDLLVQYSPN 61 L+ E ++G+ F++ L +A+TH S S + + LEFLGD ++ + + L+ Sbjct 7 LKAFEGRIGHQFREPERLLRAVTHSSLSSVTRSDNQRLEFLGDRVLGLVMAEALLAADRA 66 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAA 115 EG L+P L+ +E +A+++ L +++ R G+ E ++GD EA+ AA Sbjct 67 ASEGQLAPRFNALVRKETCAAVAREVALGDVLKLGRSEMMSGGRRKEALLGDALEAVIAA 126 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 VY+D+G +A R+L +L+ I ++ R D KT LQE Q R P Y + Sbjct 127 VYLDAGFEA--ARQLVLRLWGARIAQVERDAR---DAKTALQEWAQARGLPPPTYEAVDR 181 Query 176 EGPHHKKKFIVEAKIKEYRTLGEGKSKKEAE--QRAAEE 212 GP H F VE + LG G++ + A +R AE+ Sbjct 182 SGPDHAPIFTVEVR------LGNGETDRAAAGTKRVAEQ 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Neisseria gonorrhoeae FA 1090] Sequence ID: Q5F9X7.1 Length: 239 Range 1: 14 to 201 Score:98.2 bits(243), Expect:7e-24, Method:Compositional matrix adjust., Identities:64/192(33%), Positives:102/192(53%), Gaps:10/192(5%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 ++KKLGY F+D SLL +ALTH S+ K H E EF+GD+++N+ + +L P EG Sbjct 14 IQKKLGYAFRDMSLLRRALTHRSHHAK-HNERFEFVGDSILNYTVARMLFDAFPKLTEGE 72 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVYIDS 120 LS L+A L++E +A ++ + + + G++ +I+ D EA++AAV D+ Sbjct 73 LSRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELKSSGFRRPSILADAMEAMFAAVSFDA 132 Query 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 D N ++ LF E + A + + KD KT LQE Q R P+YR+ G Sbjct 133 --DFNTAEKVVRHLFAERVRRADFQNQA-KDGKTALQEALQARRFALPKYRIEEQIGHAD 189 Query 181 KKKFIVEAKIKE 192 F++ + E Sbjct 190 DSMFVISCDLGE 201 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Rhodobacter capsulatus] Sequence ID: Q52698.1 Length: 228 Range 1: 7 to 225 Score:97.4 bits(241), Expect:1e-23, Method:Compositional matrix adjust., Identities:68/224(30%), Positives:109/224(48%), Gaps:14/224(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 L +LG+ F L +ALTH S + + + LEFLGD ++ + + L Sbjct 7 LSAFMDRLGHRFTTPEHLVRALTHSSLGSATRPDNQRLEFLGDRVLGLSMAEALFHADGR 66 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAA 115 EG L+P L+ +E +A+ ++L +++ R G+ + ++GD EA+ AA Sbjct 67 ASEGQLAPRFNALVRKETCAAVARDIDLGAVLKLGRSEMMSGGRRKDALLGDAMEAVIAA 126 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 VY+D+G + R L +L+ I S + R D KT LQE Q R P Y + Sbjct 127 VYLDAGFE--VARALVLRLWAARIQSVDNDAR---DPKTALQEWAQARGLPPPRYETLGR 181 Query 176 EGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIKLLE 218 +GP H +F + + T + SK+ AEQ AA+ L++ LE Sbjct 182 DGPDHAPQFRIAVVLASGETEEAQAGSKRNAEQAAAKALLERLE 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III [Neisseria meningitidis 8013] Sequence ID: C9X0M5.1 Length: 239 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Neisseria meningitidis MC58] Sequence ID: Q9K0C8.1 Length: 239 Range 1: 14 to 230 Score:97.8 bits(242), Expect:1e-23, Method:Compositional matrix adjust., Identities:76/221(34%), Positives:121/221(54%), Gaps:12/221(5%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 ++KKLGY F+D SLL +ALTH S+ K H E EF+GD+++N+ + +L P EG Sbjct 14 IQKKLGYAFRDISLLRQALTHRSHHAK-HNERFEFVGDSILNYTVARMLFDAFPKLTEGE 72 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVYIDS 120 LS L+A L++E +A ++ + + + G++ +I+ D EA++AAV D+ Sbjct 73 LSRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELKSGGFRRPSILADAMEAMFAAVSFDA 132 Query 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 D N ++ LF + + A + + KD KT LQE Q R P+YR+ G + Sbjct 133 --DFNTAEKVVRHLFADRVRRADFQNQA-KDGKTALQEALQARRFALPKYRIEEQIGYAN 189 Query 181 KKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEE 219 F++ + E + +G S+K AEQ AA+E +K LEE Sbjct 190 DSMFVISCDLGELGFVCRAKGTSRKAAEQEAAKEALKWLEE 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Candidatus Phytoplasma mali AT] Sequence ID: B3R075.1 Length: 225 Range 1: 17 to 222 Score:96.3 bits(238), Expect:2e-23, Method:Compositional matrix adjust., Identities:70/216(32%), Positives:115/216(53%), Gaps:23/216(10%) Query 19 SLLEKALTHVSYS-----KKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAY 73 SL + ++TH SY+ KK+ E LEFLGDA++N + D L + EGF+S +A Sbjct 17 SLYKMSITHSSYANENKLKKKDNERLEFLGDAVINLLMADYLYTKKEKENEGFMSKKRAQ 76 Query 74 LISEEFFNLLAQKLELHKFIRIKRG----KINETIIGDVFEALWAAVYIDSGRDANFTRE 129 + E+ + A+ ++L +I + +G IN +I+ + FEAL+ A+Y+D G Sbjct 77 SVCEDSLVIYAKSIQLQNYILLGKGEKNKNINNSILANAFEALFGAIYLDLG-------- 128 Query 130 LFY---KLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIV 186 +Y K+F ++ + D+KT LQE+ Q + K+ Y + +G H K+F Sbjct 129 -YYIAKKVFILIVIPRLSNIIDNIDFKTQLQELVQSQ-KKTISYYITEEKGLDHSKEFTA 186 Query 187 EAKI-KEYRTLGEGKSKKEAEQRAAEELIKLLEESE 221 E + K+ G GK+KK AEQ AA ++ +L + E Sbjct 187 EVFLEKKNVGRGFGKTKKSAEQDAARYVLNILSKGE 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Neisseria meningitidis Z2491] Sequence ID: Q9JVD3.1 Length: 239 Range 1: 14 to 201 Score:96.3 bits(238), Expect:4e-23, Method:Compositional matrix adjust., Identities:63/192(33%), Positives:102/192(53%), Gaps:10/192(5%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 ++KKLGY F+D SLL +ALTH S+ K H E EF+GD+++N+ + +L P EG Sbjct 14 IQKKLGYAFRDISLLRQALTHRSHHAK-HNERFEFVGDSILNYTVARMLFDAFPKLTEGE 72 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVYIDS 120 LS L+A L++E +A ++ + + + G++ +I+ D EA++AAV D+ Sbjct 73 LSRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELKSGGFRRPSILADAMEAMFAAVSFDA 132 Query 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 D N ++ LF E + + + KD KT LQE Q R P+YR+ G + Sbjct 133 --DFNTAEKVVRHLFAERVRRVDFQNQA-KDGKTALQEALQARRFALPKYRIEEQIGHAN 189 Query 181 KKKFIVEAKIKE 192 F++ + E Sbjct 190 DSMFVISCDLGE 201 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Agrobacterium radiobacter K84] Sequence ID: B9JC73.1 Length: 239 Range 1: 15 to 226 Score:96.3 bits(238), Expect:4e-23, Method:Compositional matrix adjust., Identities:71/217(33%), Positives:108/217(49%), Gaps:14/217(6%) Query 7 LEKKLGYTFKDKSLLEKALTHVS--YSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LE +G+ F +K L+ ALTH S K +YE LEFLGD ++ I +LL + E Sbjct 15 LEAAIGHAFVEKERLDWALTHASARTHKAGNYERLEFLGDRVLGLCIAELLFRTFGTATE 74 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALWAAVYI 118 G LS L+S E +A +++LH FIR GK + DV E+L AA+Y+ Sbjct 75 GELSVRLNQLVSAETCAAVADEMQLHLFIRTGADVKKLTGKRMLNVRADVVESLIAALYL 134 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGP 178 D G + R+ + ++ A++ ++D KT LQE ++ P YR+ GP Sbjct 135 DGGLE--VARKFILRYWEG---RAVRPDGARRDAKTELQEWAHAKFGVTPVYRVDDRSGP 189 Query 179 HHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELI 214 H +F V ++ G +SK+ AEQ AA ++ Sbjct 190 DHDPRFTVTVEVAGAAPETGIERSKRAAEQVAATRIL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Streptococcus mutans UA159] Sequence ID: Q8DT66.1 Length: 231 Range 1: 1 to 228 Score:95.9 bits(237), Expect:5e-23, Method:Compositional matrix adjust., Identities:77/234(33%), Positives:119/234(50%), Gaps:25/234(10%) Query 4 LEQLEKKLGYTFK----DKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVD 53 ++ LEKKL FK DK LLE A TH SY+ + H E LEFLGDA++ I Sbjct 1 MKTLEKKLAEDFKIVFSDKELLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLTISH 60 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGD 107 L P K EG LS +++ ++ EE ++ ++I++ + G+ +TI+GD Sbjct 61 YLFDKYPQKAEGDLSKMRSMIVREESLAGFSRNCHFDRYIKLGKGEEKSGGRQRDTILGD 120 Query 108 VFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWK 165 +FEA A+ +D+G A + ++ ++ ++ DYKT LQE+ Q Sbjct 121 LFEAFLGALLLDAGLKA------VEAFLNQVVIPKVENNNYERVTDYKTALQELLQVDGD 174 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLE 218 +Y ++ GP H K F V + E + G GKSKK AEQ AA+ ++ L+ Sbjct 175 VLIDYEVLKESGPAHAKCFEVAVSMNHEKLSSGTGKSKKLAEQEAAKNALEKLQ 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mesoplasma florum L1] Sequence ID: Q6F1N5.1 Length: 231 Range 1: 1 to 229 Score:95.9 bits(237), Expect:5e-23, Method:Compositional matrix adjust., Identities:79/240(33%), Positives:123/240(51%), Gaps:31/240(12%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSK----KEHYETLEFLGDALVNFFIVDLLV 56 M M E E G D + ALTH SY+ KE Y+ LEFLGDA++ ++ L Sbjct 1 MTMHEFFEN-FGIKINDSKIFSTALTHNSYANETKTKETYQRLEFLGDAVLQMYVSKFLY 59 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFE 110 N EG L+ ++ ++ +E + +A+ ++L K IR+ +G+I +I+ DV+E Sbjct 60 LNFTNAPEGKLTKTRSDIVRQETLSEIAKMIDLGKIIRLGQGEIKSKGYEKPSILSDVYE 119 Query 111 ALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK---DYKTILQEITQKRWKER 167 A+ AA+Y+D T E+ K I I++ K+ DYK+ LQEI Q + Sbjct 120 AVTAAIYLDQ------TEEVLISWIKSTIFKYIEKNDYKELNHDYKSELQEIIQAEIRSD 173 Query 168 PEYRLISVEGPHH-----KKKFIVEAKI--KEYRTLGEGKSKKEAEQRAAEELIKLLEES 220 EYR VE H K ++ V + K+Y +G G SK+EA Q AA++ + L++S Sbjct 174 LEYR---VESQKHIEKDNKIEYTVSVNLDGKKY-GIGTGFSKQEASQNAAKDCLNKLKKS 229 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Latilactobacillus sakei subsp. sakei 23K] Sequence ID: Q38XR8.1 Length: 230 Range 1: 5 to 212 Score:95.1 bits(235), Expect:8e-23, Method:Compositional matrix adjust., Identities:65/218(30%), Positives:116/218(53%), Gaps:27/218(12%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH-------YETLEFLGDALVNFFIVDLL 55 ++ +L + G F + +LL++A TH SY EH E LEFLGDA++ + + L Sbjct 5 LVSELRARYGIEFNNLALLDEAFTHSSYVN-EHRELGLRDNERLEFLGDAVMEITVSEYL 63 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVF 109 + P+ EG L+ L+A ++ + F+ +++ ++IR+ +G + T++ D+F Sbjct 64 YKKYPDWPEGKLTRLRAAIVCTKSFSSFSKEAHFDRYIRLGKGEEKNGARARATLLEDLF 123 Query 110 EALWAAVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRV--KKDYKTILQEITQKRWK 165 EA A+++D GRDA +F ++ I I+ G + DYKT LQE Q+ + Sbjct 124 EAFNGALFLDQGRDAVVDFVSQV--------IFPKIEAGEFSDQTDYKTNLQEFLQQDGE 175 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKK 203 +Y+L++ GP H ++F V+ + + R LG G + Sbjct 176 IEIDYQLLAEVGPSHDRQFEVDVLVGD-RVLGSGVGRN 212 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Verminephrobacter eiseniae EF01-2] Sequence ID: A1WMW1.1 Length: 247 Range 1: 8 to 232 Score:94.7 bits(234), Expect:2e-22, Method:Compositional matrix adjust., Identities:70/229(31%), Positives:109/229(47%), Gaps:32/229(13%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGF 66 L+++L + F D LLE+A TH S+S EH E LEFLGD+++N + LL Q EG Sbjct 8 LQERLQHVFSDPGLLERATTHRSFSA-EHNERLEFLGDSVLNLAVSSLLYQRLSALPEGE 66 Query 67 LSPLKAYLISEEFFNLLAQKLELHKFIRI--------------------------KRGKI 100 LS ++A L+ +E LA +L L + +R+ G Sbjct 67 LSRVRANLVRQESLYQLALRLPLAQALRLGESLSGNRQRRSRRRCADELQPDEAGSGGLQ 126 Query 101 NETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT 160 + +I+ D EAL AVY+D+G + + L +LF +D+ + + +D KT LQE Sbjct 127 HPSILADALEALIGAVYLDAGYAS--AQALVQRLF-QDVEISPRMQAAARDAKTALQEWL 183 Query 161 QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTL--GEGKSKKEAEQ 207 R + P+Y++++ G H F V I G S++ EQ Sbjct 184 ASRKMKPPQYQVVARVGAAHCPTFEVACGIPALGLTERGSAGSRQAGEQ 232 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Dinoroseobacter shibae DFL 12 = DSM 16493] Sequence ID: A8LLD9.1 Length: 229 Range 1: 13 to 196 Score:94.0 bits(232), Expect:2e-22, Method:Compositional matrix adjust., Identities:60/189(32%), Positives:98/189(51%), Gaps:13/189(6%) Query 10 KLGYTFKDKSLLEKALTHVSYSK--KEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFL 67 ++G+ F LL +ALTH S S + + LEFLGD ++ + + L++ P REG L Sbjct 13 RIGHRFDRPELLVRALTHASRSTAGRSDNQRLEFLGDRVLGLVMAEALLEADPQAREGQL 72 Query 68 SPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSG 121 +P L+ +E +A+++ L +R+ R G+ + ++GD EA+ AAVY D+G Sbjct 73 APRYNALVRKETCAEVAREIGLGDVLRLGRSEMLTGGRRKDALLGDGMEAVIAAVYRDAG 132 Query 122 RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHK 181 +A + L +L+ + I + + R D KT LQE Q R P Y + GP H Sbjct 133 FEA--AKALILRLWGKRIGAVEADAR---DPKTALQEWAQARGLPPPAYIESARSGPDHA 187 Query 182 KKFIVEAKI 190 F + A++ Sbjct 188 PVFTISARL 196 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Anaplasma phagocytophilum str. HZ] Sequence ID: Q2GIW0.1 Length: 236 Range 1: 10 to 227 Score:94.0 bits(232), Expect:2e-22, Method:Compositional matrix adjust., Identities:68/222(31%), Positives:109/222(49%), Gaps:12/222(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH--YETLEFLGDALVNFFIVDLLVQY 58 + + E++ K GY F+D LL+ A+TH S + + + YE LEFLGDA++ + ++L Sbjct 10 LALTEKVFKISGYRFQDHELLKTAVTHPSIAAERYASYERLEFLGDAVLGLVVSEMLYTL 69 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEAL 112 P+ EG L+ + L+ +AQ L L + + +G++ N + + + EAL Sbjct 70 FPDDSEGLLTKKRIALVRGSKVVEIAQSLNLGNILLMSKGELTSGGISNNSNLENALEAL 129 Query 113 WAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+Y+D G ++ R + +K L+ +D KT LQE Q P YRL Sbjct 130 IGAIYVDGGLES--VRHFILQHWKP--LATNLADTPLQDAKTALQEWAQGHNFAIPSYRL 185 Query 173 ISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 I+ G H F VE + R G KK AE AA+ ++ Sbjct 186 INKSGLEHAPVFTVEVTVNGQRVHATGCKKKYAEIAAAKLML 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycolicibacterium smegmatis MC2 155] Sequence ID: A0QV20.1 Length: 230 Range 1: 20 to 230 Score:94.0 bits(232), Expect:2e-22, Method:Compositional matrix adjust., Identities:73/215(34%), Positives:108/215(50%), Gaps:18/215(8%) Query 20 LLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLI 75 LL ALTH SYS + E LEFLGDA++ I + L P++ EG L+ L+A ++ Sbjct 20 LLTIALTHRSYSYENGGLPTNERLEFLGDAVLGLTITEELYHRHPDRAEGDLAKLRASIV 79 Query 76 SEEFF-----NLLAQKLELHKFI----RIKRGKINETIIGDVFEALWAAVYIDSGRDANF 126 + + L + L H F+ G +I+ D E+L A+Y++ G Sbjct 80 NTQALADVGRGLTDEGLGAHLFLGKGEENSGGADKSSILADGVESLLGAIYLEHGL--TV 137 Query 127 TRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIV 186 RE+ +LF E + +A G D+K+ LQE+T R P Y +++ GP H K+F Sbjct 138 VREVILRLFGELLDTAPTLG-AGLDWKSSLQELTAARGLGAPAY-VVTSTGPDHDKEFSA 195 Query 187 EAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLEES 220 I E G G++KKEAE +AA K L+ES Sbjct 196 TVVIGEAEYGHGVGRTKKEAELKAAASAYKTLDES 230 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mesorhizobium japonicum MAFF 303099] Sequence ID: Q985A6.1 Length: 221 Range 1: 2 to 200 Score:92.4 bits(228), Expect:7e-22, Method:Compositional matrix adjust., Identities:60/204(29%), Positives:99/204(48%), Gaps:15/204(7%) Query 9 KKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG 65 ++ G+ F D+ L++ALTH S + YE EFLGD ++ + D+L+ P+ EG Sbjct 2 ERTGHAFADRQRLQRALTHASARGANAGTDYERFEFLGDRVLGLVVADMLLAAFPDAAEG 61 Query 66 FLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYID 119 LS L++ E + +A+ + L IR G+ + D E+L A +Y+D Sbjct 62 ELSLRLNALVNAEALSEIAEHIGLPDLIRAGSDVRGLEGRKRVNLRADALESLIAVLYLD 121 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 G +A R +K ++ + G ++D KT LQE + P Y++ S EGP Sbjct 122 GGLEA--ARAFIHKYWQP---RSQASGAARRDAKTELQEWAHQAASAVPAYQIDSREGPD 176 Query 180 HKKKFIVEAKIKEYR-TLGEGKSK 202 H F V ++ ++ G G+SK Sbjct 177 HDPLFTVSVRVGAFQPATGSGRSK 200 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycobacterium leprae TN] Sequence ID: O69469.1 Length: 238 Range 1: 6 to 228 Score:92.8 bits(229), Expect:9e-22, Method:Compositional matrix adjust., Identities:77/230(33%), Positives:112/230(48%), Gaps:23/230(10%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEH-----YETLEFLGDALVNFFIVDLLVQYS 59 + L G D+ LL ALTH SY+ EH E LEFLGDA+++ I D L Sbjct 6 QALLDAFGVDLPDE-LLSLALTHRSYAY-EHGGLPTNERLEFLGDAVLSLTITDELFHRH 63 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINET---------IIGDVFE 110 P++ EG L+ L+A +++ + +A+ L ET I+ D E Sbjct 64 PDRSEGDLAKLRASVVNTQALAYVARNLSDGGLGVYLLLGRGETNTGGADKSSILADGME 123 Query 111 ALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 +L A+Y+ G + R++ +LF +L A D+KT LQE+T R P Y Sbjct 124 SLLGAIYLHHGIE--VARQVILRLFGT-LLDAAPTLGAGLDWKTSLQELTAARGMGVPSY 180 Query 171 RLISVEGPHHKKKF--IVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLE 218 +++ GP H K+F +V EY + G G SKKEAEQ+AA K L+ Sbjct 181 -VVTSTGPDHDKEFTAVVVVMDTEYGS-GIGHSKKEAEQKAASAAWKALD 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Limosilactobacillus fermentum IFO 3956] Sequence ID: B2GD42.1 Length: 232 Range 1: 4 to 228 Score:91.7 bits(226), Expect:2e-21, Method:Compositional matrix adjust., Identities:66/231(29%), Positives:114/231(49%), Gaps:21/231(9%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLL 55 ++ + L K G F + +LL +A T SY + +YE +EFLGDA++ F+ + + Sbjct 4 QLQDYLAKTYGIHFNNPALLAEAFTQASYVNEHPHENLKYYERIEFLGDAVLQLFVSEYI 63 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVF 109 + P +G L+ L+A ++ E+ F+ A++ ++IR+ +G + +++ D+F Sbjct 64 YRRYPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGKGEEMAGARNRASLLCDIF 123 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKER 167 E+ A+Y+D GR A + + I + G D KT LQE Q+ Sbjct 124 ESFIGALYLDQGRQA------VEQFIQTVIFPKLDLGWFDHAVDAKTSLQEFLQRNGDVA 177 Query 168 PEYRLISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLL 217 EY L+S G + F VE + + G+G SKK AE AA+ ++ L Sbjct 178 IEYDLLSEGGTENDPVFEVEVTVDGKKVATGQGSSKKHAEMEAAKHALEKL 228 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycobacterium tuberculosis variant bovis AF2122/97] Sequence ID: P66667.1 Length: 240 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycobacterium tuberculosis CDC1551] Sequence ID: P9WH02.1 Length: 240 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycobacterium tuberculosis H37Rv] Sequence ID: P9WH03.1 Length: 240 Range 1: 6 to 214 Score:89.7 bits(221), Expect:1e-20, Method:Compositional matrix adjust., Identities:74/217(34%), Positives:110/217(50%), Gaps:25/217(11%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSP 60 + L LG D+ LL ALTH SY+ + E LEFLGDA++ I D L P Sbjct 6 QPLLDALGVDLPDE-LLSLALTHRSYAYENGGLPTNERLEFLGDAVLGLTITDALFHRHP 64 Query 61 NKREGFLSPLKAYLISEEFF-----NLLAQKLELHKFIRIKRGKIN------ETIIGDVF 109 ++ EG L+ L+A +++ + L A+ L +H + + RG+ N +I+ D Sbjct 65 DRSEGDLAKLRASVVNTQALADVARRLCAEGLGVH--VLLGRGEANTGGADKSSILADGM 122 Query 110 EALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPE 169 E+L A+Y+ G + RE+ +LF +L A D+KT LQE+T R P Sbjct 123 ESLLGAIYLQHGMEK--AREVILRLFGP-LLDAAPTLGAGLDWKTSLQELTAARGLGAPS 179 Query 170 YRLISVEGPHHKKKF--IVEAKIKEYRTLGEGKSKKE 204 Y L++ GP H K+F +V EY + G G+SKKE Sbjct 180 Y-LVTSTGPDHDKEFTAVVVVMDSEYGS-GVGRSKKE 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Lactobacillus acidophilus NCFM] Sequence ID: Q5FJJ7.1 Length: 228 Range 1: 5 to 211 Score:89.4 bits(220), Expect:1e-20, Method:Compositional matrix adjust., Identities:74/215(34%), Positives:112/215(52%), Gaps:23/215(10%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH-------YETLEFLGDALVNFFIVDL 54 K L +L+ + F ++ LLE+A TH SYS EH YE LEFLGDA++ + + Sbjct 5 KFLNKLKNEYNIEFNNEKLLEEAFTHSSYSN-EHPDDGIRDYEKLEFLGDAVLELAVSNY 63 Query 55 LVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDV 108 L ++ P EG L+ L++ ++ E F+ A + K I + G + +T++ DV Sbjct 64 LYRHYPKLNEGELTRLRSNIVRTEGFSEFAIECGFQKEIHLGNGEEKAGARNRKTLLEDV 123 Query 109 FEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP 168 FEA A+++D G A R L ++ L A E +DYKT LQE+ Q+ Sbjct 124 FEAFNGALFLDQGMPA-VERFLHLTVYP---LIAKGEFDDSRDYKTDLQELLQQNGPVNI 179 Query 169 EYRLIS-VEGPHHKKKFIVEAKIKE-YRTLGEGKS 201 EY +IS + P H F+VE KI + +T GEG + Sbjct 180 EYSVISESQLPSH---FVVELKINDQVQTQGEGHN 211 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlorobium chlorochromatii CaD3] Sequence ID: Q3AQ14.1 Length: 248 Range 1: 6 to 227 Score:89.4 bits(220), Expect:2e-20, Method:Compositional matrix adjust., Identities:65/229(28%), Positives:108/229(47%), Gaps:24/229(10%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY----SKKEHYET---LEFLGDALVNFFIVDLLV 56 L L+ +G + L + ALTH S + H E+ LEFLGDA++ I L Sbjct 6 LAYLQTLIGSLDGNARLYQTALTHRSVIGNTALSHHNESNQRLEFLGDAVLGLLISHFLF 65 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFE 110 Q P EG LS +A +++ + A+ + L + + + +E+ + D FE Sbjct 66 QNFPASAEGDLSKTRAKIVNSKSLACFARSIGLGEHLLLGESAAHYNIRDSESALADAFE 125 Query 111 ALWAAVYIDSGRDANFT----RELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKE 166 +L A+Y+D G DA + + ++ F + S +++YK+ L E +Q Sbjct 126 SLIGAIYLDKGLDAAYGFVDKHIIHHQSFSAIVAS-------EQNYKSCLIEYSQAHHVA 178 Query 167 RPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 P Y +I+ G H K+F VE + G + KK+AEQ AA+E ++ Sbjct 179 APVYTVIAEHGAEHDKEFTVEVSCNNIKGCGTARRKKDAEQLAAKEAME 227 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycobacterium avium subsp. paratuberculosis K-10] Sequence ID: Q73VL8.1 Length: 237 Range 1: 1 to 210 Score:88.2 bits(217), Expect:4e-20, Method:Compositional matrix adjust., Identities:73/217(34%), Positives:103/217(47%), Gaps:23/217(10%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH-----YETLEFLGDALVNFFIVDLL 55 M + L LG D+ LL ALTH SY+ EH E LEFLGDA++ I D L Sbjct 1 MSSRQPLLDALGVELPDE-LLSLALTHRSYAY-EHGGLPTNERLEFLGDAVLGLTITDAL 58 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI---------KRGKINETIIG 106 P++ EG L+ L+A +++ + +A+KL G +I+ Sbjct 59 YHRHPDRTEGDLAKLRASVVNTQALADVARKLCDGGLGAHLLLGRGEANTGGADKSSILA 118 Query 107 DVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKE 166 D E+L A+Y+ G D RE+ +LF +L A D+KT LQE+T R Sbjct 119 DGMESLLGAIYLQHGIDT--AREVILRLFGA-LLDAAPTLGAGLDWKTSLQELTAARGMG 175 Query 167 RPEYRLISVEGPHHKKKF--IVEAKIKEYRTLGEGKS 201 P Y L++ GP H K+F +V EY T G G+S Sbjct 176 APSY-LVTSTGPDHDKEFTAVVVVADTEYGT-GVGRS 210 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Azorhizobium caulinodans ORS 571] Sequence ID: A8I3B5.1 Length: 235 Range 1: 10 to 224 Score:88.2 bits(217), Expect:4e-20, Method:Compositional matrix adjust., Identities:75/220(34%), Positives:108/220(49%), Gaps:17/220(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKE-----HYETLEFLGDALVNFFIVDLLVQYSPN 61 LE +LG++F D+S L ALTH+S K + Y+ LEFLGD ++ + +L P Sbjct 10 LEARLGHSFADRSHLVLALTHISSVKGQAVRVRSYQRLEFLGDHVLGSVVSHMLYAAFPK 69 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAA 115 EG LS A L+ EE +AQ + L ++R+ G+ I+ DV EA+ AA Sbjct 70 AEEGELSRRLAELVREEACAEVAQDMGLGPYLRLGPGEAQSGARQRRAILADVAEAVVAA 129 Query 116 VYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 VY+D G +A + F L A + R +D KT+LQE Q R P YR + Sbjct 130 VYLDGGYEAASA---LVERFWRGRLEAPR--RPLRDPKTVLQEWAQARGLPPPVYRDVER 184 Query 176 EGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELI 214 GP H +F V + EG SK+ A++ AA + Sbjct 185 SGPDHAPRFRVAVDLPGLECAEAEGGSKQTAQKAAASAFL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Corynebacterium efficiens YS-314] Sequence ID: Q8FP16.2 Length: 247 Range 1: 35 to 237 Score:88.6 bits(218), Expect:4e-20, Method:Compositional matrix adjust., Identities:66/207(32%), Positives:109/207(52%), Gaps:15/207(7%) Query 17 DKSLLEKALTHVSYSKKE----HYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKA 72 D+ LL ALTH S++ + + E LEFLGDA++ + + L + P+ E +S ++A Sbjct 35 DRDLLVLALTHRSFANENGMLPNNERLEFLGDAVLGLAVANRLYELYPSSPESDISKMRA 94 Query 73 YLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSGRDANF 126 ++S +A+++ L +FI + +G++ ++I+ D EAL A++ G + Sbjct 95 SIVSRYGLADIAREINLGEFILLGKGELLTEGRSKDSILADTTEALLGAIFRQHGYE--V 152 Query 127 TRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIV 186 R++ LF I A +G + +D+KT LQE +R K EY+ SV GP H F Sbjct 153 ARDVVLTLFHHKINHASAKG-IHQDWKTTLQEELAQRKKPMVEYQTTSV-GPDHDLLFTA 210 Query 187 EAKIKEYRT-LGEGKSKKEAEQRAAEE 212 + + GEG +KK AEQ AA + Sbjct 211 VVYLGDVEMGRGEGPNKKLAEQEAARQ 237 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Corynebacterium jeikeium K411] Sequence ID: Q4JUY7.1 Length: 244 Range 1: 37 to 242 Score:88.2 bits(217), Expect:4e-20, Method:Compositional matrix adjust., Identities:63/210(30%), Positives:107/210(50%), Gaps:14/210(6%) Query 20 LLEKALTHVSYSKKEHY----ETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLI 75 LL ALTH S++ + + E LEFLGDA++ + + L + P + E +S +++ ++ Sbjct 37 LLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGVV 96 Query 76 SEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSGRDANFTRE 129 + +A++L + +I + RG++ +I+ D E++ A+Y+ G + R Sbjct 97 NMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHHGFE--VARA 154 Query 130 LFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAK 189 +LF E I A G + D+KT+L E P Y + EGP H K F Sbjct 155 TVLRLFAEKITEAPTTG-LTMDWKTVLLEKLSDMKLPLPTYE-VRGEGPEHDKTFYATVT 212 Query 190 IKEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 I++ T GEG +KK AE AA++ ++ L E Sbjct 213 IEDLVTHGEGHTKKVAEHAAAKQAVQKLNE 242 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Corynebacterium diphtheriae NCTC 13129] Sequence ID: Q6NGH3.1 Length: 249 Range 1: 36 to 245 Score:88.6 bits(218), Expect:4e-20, Method:Compositional matrix adjust., Identities:65/214(30%), Positives:111/214(51%), Gaps:15/214(7%) Query 18 KSLLEKALTHVSYSKKE----HYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAY 73 + LL ALTH S++ + + E LEFLGD+++ + L Q + E +S ++A Sbjct 36 RELLVLALTHRSFANENGMLPNNERLEFLGDSVLGLSVAGQLYQQYTSSPESDISKMRAS 95 Query 74 LISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEALWAAVYIDSGRDANFT 127 ++S +A+++ L + I ++ G+ ++I+ D EAL A+Y+ G + Sbjct 96 IVSRYGLADIAREINLGQHILLGKGEQLHDGRSKDSILADTTEALLGAIYLAHGFE--IA 153 Query 128 RELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVE 187 R+ +LFK I +A G + +D+KT LQE +R E P Y +V GP H++ F E Sbjct 154 RDTVLRLFKHKIDTASATG-LHQDWKTTLQERLAERNLEMPTYT-STVTGPEHEQTFTAE 211 Query 188 AKI-KEYRTLGEGKSKKEAEQRAAEELIKLLEES 220 + G G +KK AEQ AA + + L+++ Sbjct 212 VAVHGTVLGTGVGTNKKLAEQAAAHKAVGFLQDN 245 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Lactobacillus johnsonii NCC 533] Sequence ID: Q74IP8.1 Length: 226 Range 1: 8 to 211 Score:87.8 bits(216), Expect:5e-20, Method:Compositional matrix adjust., Identities:69/214(32%), Positives:112/214(52%), Gaps:25/214(11%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSK----KEHYETLEFLGDALVNFFIVDLLVQYSP 60 + L+KK G F ++ LLE A TH SY+ ++ YE LEFLGDA++ + D L ++ P Sbjct 8 QNLKKKYGIKFNNEKLLEDAFTHSSYANEHPGRKDYEKLEFLGDAVLELAVSDYLYRHFP 67 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWA 114 EG L+ +++ ++ E F+ A + + I + +G + +T++ DVFEA Sbjct 68 RLNEGELTRMRSNIVRTEGFSEFAIECGFPEEINLGKGEEKAGARKRKTLLEDVFEAFNG 127 Query 115 AVYIDSGRDA--NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRL 172 A+++D G A +F Y L E +A +DYKT LQE Q + EY++ Sbjct 128 ALFLDQGMPAVQHFLHLTVYPLIAEGDFNA------SRDYKTELQERLQVNGPVKIEYQV 181 Query 173 ISVE--GPHHKKKFIVEA-KIKEYRTLGEGKSKK 203 IS + P K + +V K+ E G+G++KK Sbjct 182 ISEDESKPSFKVQLLVNGEKVSE----GQGRNKK 211 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821] Sequence ID: Q9Z5U2.3 Length: 246 Range 1: 30 to 246 Score:87.8 bits(216), Expect:8e-20, Method:Compositional matrix adjust., Identities:64/223(29%), Positives:113/223(50%), Gaps:13/223(5%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 + +EK LG+ KD +L +A+TH S+ + Y+ LEFLGD ++ I + L P + Sbjct 30 ISWIEKNLGHRPKDPALFLRAMTHPSHGNSD-YQRLEFLGDRVLGLVIANWLYDLFPREP 88 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVY 117 EG LS L+S +A+ + L +++R+ + ++ ++GDV EA+ A++ Sbjct 89 EGKLSRRLNSLVSGASCASIARIVGLPQWLRLGKQARDDGAAASDNVLGDVMEAMIGAIF 148 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 ++SG +A +L +K + + + K K+ LQE + P Y ++S G Sbjct 149 LESGIEA--AGKLIHKYWAPLVTG---QESAPKHPKSALQEWAAAHNRRPPVYEIVSRTG 203 Query 178 PHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLEE 219 P H F ++ I EG SK+EA+ AA+ L+ +L + Sbjct 204 PQHNPCFTIQVSIAGVGEASAEGSSKQEAQTAAAQALLDILAQ 246 >RecName: Full=Putative protein A464R [Paramecium bursaria Chlorella virus 1] Sequence ID: Q98514.1 Length: 275 Range 1: 52 to 260 Score:87.0 bits(214), Expect:2e-19, Method:Compositional matrix adjust., Identities:67/214(31%), Positives:111/214(51%), Gaps:13/214(6%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEH-YETLEFLGDALVNFFIVDLLVQYSPNKR 63 E +E +G D S + A ++ + + E YE +EF+GD+++ F I L P K Sbjct 52 EDVEYLIGMPIIDFSYYKTAFSYNAIVEGEATYERMEFVGDSVLGFIIARYLYDNFPGKD 111 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFI-----RIKRG-KINETIIGDVFEALWAAVY 117 EGFLS L+ +S +F + +A ++ LH ++ + RG N I+ DVFEAL A+Y Sbjct 112 EGFLSRLRTKFVSGKFLSSIALRMGLHNYVIMHQKGLYRGWNTNPRILEDVFEALMGAIY 171 Query 118 IDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEG 177 D G +A ++ F + + ++ + +YK L + T+K RPE+ + +G Sbjct 172 FDLGINA--AKQFFMTTLAK--YADMQSLMLDTNYKDRLLKHTRKVELPRPEFVSVFEKG 227 Query 178 PHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAA 210 FIV+ I + + G GKS+K+AEQ A+ Sbjct 228 -GANPSFIVDVVINGQKISTGTGKSRKDAEQNAS 260 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Leifsonia xyli subsp. xyli str. CTCB07] Sequence ID: Q6AFJ4.1 Length: 237 Range 1: 11 to 220 Score:86.3 bits(212), Expect:2e-19, Method:Compositional matrix adjust., Identities:71/215(33%), Positives:105/215(48%), Gaps:16/215(7%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKE----HYETLEFLGDALVNFFIVDLLVQYSPNK 62 L +KLG D LLE ALTH SY+ + + E LEFLGD+++ + L + +P Sbjct 11 LLEKLGVDI-DPELLELALTHRSYAYENGGIPNNERLEFLGDSILGQAVTVKLFRENPGL 69 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAV 116 EG L+ +A L+S +A+ + L +++ + RG+ +I+ D EA+ AV Sbjct 70 DEGELAKRRASLVSSVALAEVARGIGLGEYLLLGRGENQSGGREKASILADTVEAVIGAV 129 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE 176 Y+D+G D L +L + + G D KT LQE +P Y +I+ Sbjct 130 YLDAGGDE--ATALVLRLIGPLLADPDRFG-AAMDPKTSLQEAAAHHGAGQPVYTVINT- 185 Query 177 GPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAA 210 GP H K F + T GEG SKK+AE AA Sbjct 186 GPDHSKTFHATVDVGGLVTASGEGTSKKQAEMAAA 220 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia pneumoniae] Sequence ID: Q9Z9C7.1 Length: 237 Range 1: 10 to 224 Score:86.3 bits(212), Expect:2e-19, Method:Compositional matrix adjust., Identities:69/223(31%), Positives:112/223(50%), Gaps:23/223(10%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQYSPN 61 +E KL +TF LLE ALTH SY + E E LEFLGDA++ + + L P+ Sbjct 10 IEAKLNFTFTQPKLLEIALTHPSYKNESAVQIEDSERLEFLGDAVLGLIVTEHLFLLFPS 69 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG-KINE-----TIIGDVFEALWAA 115 EG LS +A L++ + L + ++ I +G KI + ++FE++ A Sbjct 70 MDEGTLSTARASLVNAKACCRYTTMLGIGDYLLIGKGEKIQSERGRLSAYANLFESILGA 129 Query 116 VYIDSGRDANFTRELFYKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 VY+D G R+L L +E+IL + + K +LQ+ TQK+++ P Y+ Sbjct 130 VYLDGGLSP--ARKLTVPLLPPREEILPLM-----SGNPKNLLQQFTQKQFRVLPVYQST 182 Query 174 SVEGPHHKKKFIVEAKIKEYRTLGEGK--SKKEAEQRAAEELI 214 +V + ++ + + GEG SKKEAE+ AA++ + Sbjct 183 AVTDAQGNVSYQIQVLVNQ-EVWGEGNASSKKEAEKIAAQQAL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia trachomatis 434/Bu] Sequence ID: B0B7L3.1 Length: 231 Range 1: 7 to 225 Score:85.9 bits(211), Expect:3e-19, Method:Compositional matrix adjust., Identities:77/231(33%), Positives:114/231(49%), Gaps:31/231(13%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY-----SKKEHYETLEFLGDALVNFFIVDLLVQY 58 ++ +E KL +TF LL ALTH SY S +E E LEFLGDA++ + + L Sbjct 7 IQAIESKLNFTFSHPRLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLFLL 66 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIG------DVFEAL 112 P EG LS +A L++ E QKL L + + I RG+ ++ G ++FEA+ Sbjct 67 FPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLLIGRGEKMQSHRGKISAYANLFEAI 126 Query 113 WAAVYIDSGRDANFTRELFYKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 AVY+D G R++ L KE IL + + K LQ+ TQ+ K P Y Sbjct 127 LGAVYLDGGLSP--ARQIIVPLLPDKESILPLM-----LVNPKNRLQQFTQQTLKVLPSY 179 Query 171 RLI---SVEG-PHHKKKFIVEAKIKEYRTLGEG--KSKKEAEQRAAEELIK 215 + + S +G P + + V + GEG SKKEAE+ AA++ + Sbjct 180 KALPWKSEDGSPGYHVQVFVNGDL-----WGEGFAGSKKEAEKLAAKQALS 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma capricolum subsp. capricolum ATCC 27343] Sequence ID: Q2SRZ8.1 Length: 232 Range 1: 15 to 226 Score:85.9 bits(211), Expect:3e-19, Method:Compositional matrix adjust., Identities:66/217(30%), Positives:113/217(52%), Gaps:20/217(9%) Query 16 KDKSLLEKALTHVSYSK----KEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLK 71 D+ + ++ALTH SY+ K Y+ LEFLGDA++ ++ L + EG L+ L+ Sbjct 15 NDQQIYKEALTHNSYANERKLKYSYQRLEFLGDAILQMYVSKFLFFHYSKLGEGELTRLR 74 Query 72 AYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSGRDA- 124 + + EE + +A+ + L + IR+ G++ ++I+ D+FEAL AAVYID D Sbjct 75 SSTVREESLSRIAKDINLGQLIRLGHGELMTKGYEKQSILADIFEALTAAVYIDQNEDGL 134 Query 125 -NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVE--GPHHK 181 + + +K K+ V KD+K+ LQE+ Q + +Y + + E +K Sbjct 135 LIWLEQTLFKYMKDPTFI-----NVTKDFKSELQELLQSEKRSDLKYIIENEEFFVNENK 189 Query 182 KKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLL 217 + V + + +G+G SK+EAEQ AA + + L Sbjct 190 TLYTVSVNLDGQKFGVGKGYSKQEAEQNAASDCLSKL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia trachomatis L2b/UCH-1/proctitis] Sequence ID: B0BBS8.1 Length: 231 Range 1: 7 to 225 Score:85.9 bits(211), Expect:3e-19, Method:Compositional matrix adjust., Identities:77/231(33%), Positives:114/231(49%), Gaps:31/231(13%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY-----SKKEHYETLEFLGDALVNFFIVDLLVQY 58 ++ +E KL +TF LL ALTH SY S +E E LEFLGDA++ + + L Sbjct 7 IQAIESKLNFTFSHPRLLITALTHSSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLFLL 66 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIG------DVFEAL 112 P EG LS +A L++ E QKL L + + I RG+ ++ G ++FEA+ Sbjct 67 FPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLLIGRGEKMQSHRGKISAYANLFEAI 126 Query 113 WAAVYIDSGRDANFTRELFYKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 AVY+D G R++ L KE IL + + K LQ+ TQ+ K P Y Sbjct 127 LGAVYLDGGLSP--ARQIIVPLLPDKESILPLM-----LVNPKNRLQQFTQQTLKVLPSY 179 Query 171 RLI---SVEG-PHHKKKFIVEAKIKEYRTLGEG--KSKKEAEQRAAEELIK 215 + + S +G P + + V + GEG SKKEAE+ AA++ + Sbjct 180 KALPWKSEDGSPGYHVQVFVNGDL-----WGEGFAGSKKEAEKLAAKQALS 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlorobaculum tepidum TLS] Sequence ID: Q8KAN7.1 Length: 272 Range 1: 51 to 260 Score:85.9 bits(211), Expect:6e-19, Method:Compositional matrix adjust., Identities:67/217(31%), Positives:114/217(52%), Gaps:21/217(9%) Query 19 SLLEKALTHVSYS---KKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLI 75 +L +++ H +S K E + LEFLGDA+++ I + L + P EG LS +A ++ Sbjct 51 ALTHRSVLHDHHSEEHKPESNQRLEFLGDAVLDLLISEHLFKQFPGSDEGHLSSNRAKIV 110 Query 76 SEEFFNLLAQKLELHKFIRI------KRGKINETIIGDVFEALWAAVYID---SGRDANF 126 + + A +L+L + + I ++ + +E+ + D EAL A+Y+D +G + Sbjct 111 NRKSLAAFALELQLGEHLIIGESADKQKIRTSESALADALEALVGAIYLDQGLAGAERFI 170 Query 127 TRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIV 186 T + K+ ++ A + +YK+ L E TQ R P Y +I+ EG H+K F+V Sbjct 171 TNHVIAKVDLHKLVEA------EYNYKSRLIEYTQSRQLPPPLYTVITEEGAEHEKTFVV 224 Query 187 EAKIKEYRTLGEGKS--KKEAEQRAAEELIKLLEESE 221 E + LG G + KK+AEQ AA+E +K LE + Sbjct 225 EVSCN-GQPLGRGTAPRKKDAEQLAAKEAMKRLESGD 260 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia muridarum str. Nigg] Sequence ID: Q9PK97.1 Length: 232 Range 1: 7 to 225 Score:84.7 bits(208), Expect:8e-19, Method:Compositional matrix adjust., Identities:74/227(33%), Positives:111/227(48%), Gaps:23/227(10%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY-----SKKEHYETLEFLGDALVNFFIVDLLVQY 58 ++ +E KL +TF LL ALTH SY S E E LEFLGDA++ + + L Sbjct 7 IQAVESKLKFTFSQPRLLVTALTHPSYRNEFPSDGEDSERLEFLGDAVLGLVVTEHLFLL 66 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIG------DVFEAL 112 P+ EG LS ++ L++ E QKL L + + I RG+ ++ G ++FEA+ Sbjct 67 FPSLNEGLLSTTRSALVNAEACFNYTQKLSLGEHLLIGRGEKMQSHRGKISAYANLFEAI 126 Query 113 WAAVYIDSGRDANFTRELFYKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 AVY+D G R++ L KE IL + + K LQ+ TQ+ K P Y Sbjct 127 LGAVYLDGGLAP--ARQIIVPLLPNKEAILPLM-----LVNPKNRLQQFTQQTLKVLPTY 179 Query 171 RLISVEGPHHKKKFIVEAKIKEYRTLGEG--KSKKEAEQRAAEELIK 215 + + V+ + E + GEG SKKEAE+ AA++ + Sbjct 180 IALPWSSEDGTPGYHVQVFVNE-KLWGEGFAGSKKEAEKLAAKQALS 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bifidobacterium longum NCC2705] Sequence ID: Q8G7H1.2 Length: 242 Range 1: 14 to 235 Score:84.7 bits(208), Expect:9e-19, Method:Compositional matrix adjust., Identities:68/227(30%), Positives:116/227(51%), Gaps:19/227(8%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKE----HYETLEFLGDALVNFFIVDLLVQYSPN 61 +L + LG T LL +ALTH S+S + +YE LEFLGDA++ + L P+ Sbjct 14 ELLEALGTTLS-PDLLVQALTHRSFSHEHPGVANYERLEFLGDAVLELVSTETLFTIHPD 72 Query 62 KREGFLSPLKAYLISEEFFNLLAQ-KLELHKFIRIKRGKINE------TIIGDVFEALWA 114 EG L+ ++A +SE+ + +A+ KL++ +I + G+ + +I+ D+ E+L Sbjct 73 MTEGQLAKMRAKAVSEDALSAIAKTKLKVGPYILLGHGEAEQGGAEKNSILCDIVESLIG 132 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLIS 174 A +++ G D R++ ++L + + EG D+KT L KE P Y + Sbjct 133 ATFLEHGIDE--ARKVIHRLIDDTLAEVATEGPA-LDWKTSLTVKAHGLGKEEPVYHM-E 188 Query 175 VEGPHHKKKFIVEAKIKEYR---TLGEGKSKKEAEQRAAEELIKLLE 218 V GP + + F + E +G+G SK++A+ AAE K L+ Sbjct 189 VSGPEYAQIFTARVSLGENGDIIGIGKGSSKRKAQLAAAEAGWKSLD 235 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Zunongwangia profunda SM-A87] Sequence ID: D5BDP9.2 Length: 243 Range 1: 17 to 187 Score:84.7 bits(208), Expect:1e-18, Method:Compositional matrix adjust., Identities:59/173(34%), Positives:93/173(53%), Gaps:10/173(5%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLL 55 L K LG+ KD S+ E+A TH S + K+ +YE LEFLGDA++ I L Sbjct 17 NFFNTLHKLLGFRPKDLSVYERAFTHRSLNVKDPSGNPINYERLEFLGDAMLGSVIASHL 76 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR--IKRGKINETIIGDVFEALW 113 Q P EG+L+ +++ ++S + N L + L L +F++ I + I G++FEAL Sbjct 77 YQEVPEGDEGYLTKMRSKIVSRKHLNELGKDLNLIRFVKSNIPNDQFGVNIHGNIFEALV 136 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKE 166 A+Y+D G R ++ ++ + + EGRV YK++L E QK+ KE Sbjct 137 GAIYLDRGYKY-CNRFIYNRVIEPYVDIETLEGRV-ISYKSLLIEWCQKQKKE 187 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Nocardia farcinica IFM 10152] Sequence ID: Q5YS08.1 Length: 240 Range 1: 29 to 229 Score:84.3 bits(207), Expect:1e-18, Method:Compositional matrix adjust., Identities:70/206(34%), Positives:101/206(49%), Gaps:20/206(9%) Query 20 LLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLI 75 LL ALTH SY+ + E LEFLGD+++ I + L P+K EG L+ L+A ++ Sbjct 29 LLRLALTHRSYAYENGGLPTNERLEFLGDSVLGLSITERLYHEHPDKSEGELAKLRASVV 88 Query 76 SEEFFNLLAQKLELHKFI---------RIKRGKINETIIGDVFEALWAAVYIDSGRDANF 126 + +A+ L + G+ +I+ D E+L AV++ G D Sbjct 89 NMHALAEVARGLGEGGLGAHLLLGKGEELTGGRDKPSILADGMESLLGAVHLQHGID--V 146 Query 127 TRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIV 186 R + +LF D+L D+KT LQE+T +R P Y IS GP H K+F Sbjct 147 ARGVVLRLFA-DLLERGPRMGAGLDWKTSLQELTAERGLGVPSYE-ISSTGPDHDKEFTA 204 Query 187 EAKIKEYRTLGE--GKSKKEAEQRAA 210 I R G+ G+SKKEAEQ+AA Sbjct 205 TTVIGG-RAYGQGVGRSKKEAEQKAA 229 >RecName: Full=Ribonuclease 3 2; AltName: Full=Ribonuclease III 2; Short=RNase III 2 [Nostoc sp. PCC 7120 = FACHB-418] Sequence ID: Q8YPT4.2 Length: 242 Range 1: 10 to 217 Score:84.3 bits(207), Expect:1e-18, Method:Compositional matrix adjust., Identities:65/211(31%), Positives:110/211(52%), Gaps:12/211(5%) Query 2 KMLEQLEKKLGYTFKDK---SLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQY 58 + LE L +KLG LL+ ALTH + S+ +YE LEF+GDA+V +L + Sbjct 10 RQLESLVRKLGLPITAPIKWELLDLALTHPTVSESANYEQLEFVGDAVVRLAAAVMLWET 69 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQK--LELHKFI--RIKRGKIN-ETIIGDVFEALW 113 P+ G + +++ L+S+ LA++ LELH + KI E+ + D FEA+ Sbjct 70 YPDCPVGDFAAIRSVLVSDRILAQLAREYGLELHLLVAGSATSDKIGQESRLADAFEAVL 129 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 A+Y+ S + R F++ + + I+ + +YK LQE TQ ++K PEYR++ Sbjct 130 GALYL-STSNLELIRPWLDHHFRQ-LAAEIRLDPARLNYKAALQEWTQAQFKVLPEYRVV 187 Query 174 SV-EGPHHKKKFIVEAKIKEYRTLGEGKSKK 203 + + +++F E + + LGEGK + Sbjct 188 EINQANRTQERFAAEVWLHGNK-LGEGKGRS 217 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia felis Fe/C-56] Sequence ID: Q253V2.1 Length: 237 Range 1: 7 to 222 Score:84.0 bits(206), Expect:1e-18, Method:Compositional matrix adjust., Identities:76/228(33%), Positives:115/228(50%), Gaps:31/228(13%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQY 58 ++++E KL +TF LL ALTH SY + E E LEFLGDA++ + + L Sbjct 7 IKEVEAKLKFTFTQPQLLVTALTHPSYRNETVTITEDSERLEFLGDAVLCLIVTEHLFLL 66 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEAL 112 P+ EG LS +A LI+ L L +++ I +G + + ++FEA+ Sbjct 67 FPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLLIGKGERIQNERGRTSAYANLFEAI 126 Query 113 WAAVYIDSGRDANFTRELFYKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 AVY+D G R++ L K+DIL + + K LQ++TQK+ + P Y Sbjct 127 LGAVYLDGGLAP--ARQITVPLLPSKKDILPLM-----LGNPKNRLQQLTQKQLRTLPVY 179 Query 171 R---LISVEG-PHHKKKFIVEAKIKEYRTLGEG--KSKKEAEQRAAEE 212 + IS +G P + + IV +I GEG SKKEAE+ AA+E Sbjct 180 QSTPWISPQGAPGYHIRVIVNDEI-----WGEGFALSKKEAEKLAAQE 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia trachomatis D/UW-3/CX] Sequence ID: O84299.1 Length: 231 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia trachomatis A/HAR-13] Sequence ID: Q3KM65.1 Length: 231 Range 1: 7 to 225 Score:83.6 bits(205), Expect:2e-18, Method:Compositional matrix adjust., Identities:76/231(33%), Positives:113/231(48%), Gaps:31/231(13%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY-----SKKEHYETLEFLGDALVNFFIVDLLVQY 58 ++ +E KL +TF LL ALTH SY S +E E LEFLGDA++ + + L Sbjct 7 IQAIESKLNFTFSHPRLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLFLL 66 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIG------DVFEAL 112 P EG LS +A L++ E QKL L + + I RG+ ++ G ++ EA+ Sbjct 67 FPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLLIGRGEKMQSHRGKISAYANLLEAI 126 Query 113 WAAVYIDSGRDANFTRELFYKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 AVY+D G R++ L KE IL + + K LQ+ TQ+ K P Y Sbjct 127 LGAVYLDGGLSP--ARQIIVPLLPDKESILPLM-----LVNPKNRLQQFTQQTLKVLPSY 179 Query 171 RLI---SVEG-PHHKKKFIVEAKIKEYRTLGEG--KSKKEAEQRAAEELIK 215 + + S +G P + + V + GEG SKKEAE+ AA++ + Sbjct 180 KALPWKSEDGSPGYHVQVFVNGDL-----WGEGFAGSKKEAEKLAAKQALS 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Limosilactobacillus reuteri subsp. reuteri] Sequence ID: A5VKP2.1 Length: 233 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Limosilactobacillus reuteri JCM 1112] Sequence ID: B2G826.1 Length: 233 Range 1: 1 to 225 Score:83.6 bits(205), Expect:2e-18, Method:Compositional matrix adjust., Identities:68/233(29%), Positives:114/233(48%), Gaps:29/233(12%) Query 3 MLEQLE----KKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIV 52 M+E+L+ K+ F + +LL +A T SY + +YE +EFLGDA++ + Sbjct 1 MIEELQDYLAKEFNIHFDNPALLAEAFTQASYVNEHPNQGLKYYERIEFLGDAVLELIVS 60 Query 53 DLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIG 106 + + + P +G L+ L+A ++ E+ F+ A++ ++IR+ G + ++ Sbjct 61 EYIYKRFPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARERPGLLC 120 Query 107 DVFEALWAAVYIDSGRDAN---FTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKR 163 D+FE+ A+Y+D GR A R +F KL A+ D KT LQE Q+ Sbjct 121 DIFESFIGALYLDQGRPAVEKFVQRVIFPKLDMGWFDHAV-------DAKTSLQEFLQRD 173 Query 164 WKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGK--SKKEAEQRAAEELI 214 EY L+ G + +F V +GEGK SKK AE +AA++ + Sbjct 174 GDIAIEYHLVEESGTENDPEFKVNVTANG-DVIGEGKGSSKKHAEMQAAQQAL 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia abortus S26/3] Sequence ID: Q5L6E3.1 Length: 237 Range 1: 7 to 224 Score:81.6 bits(200), Expect:1e-17, Method:Compositional matrix adjust., Identities:71/226(31%), Positives:111/226(49%), Gaps:23/226(10%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQY 58 ++++E KL +TF LL ALTH SY + E E LEFLGDA++ + + L Sbjct 7 IKEVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLL 66 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGK--INE----TIIGDVFEAL 112 P+ EG LS +A LI+ L L +++ I +G+ NE + ++FEA+ Sbjct 67 FPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLLIGKGERIQNERGKTSAYANLFEAI 126 Query 113 WAAVYIDSGRDANFTRELFYKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 AVY+D G R++ L K+DIL + + K LQ++TQK + P Y Sbjct 127 LGAVYLDGGLAP--ARQITVPLLPSKKDILPLM-----LGNPKNRLQQLTQKHLRTLPVY 179 Query 171 RLISVEGPHHKKKFIVEAKIKEYRTLGEG--KSKKEAEQRAAEELI 214 + P + + + + GEG SKKEAE+ AA++ + Sbjct 180 QYEPWTSPQGASGYHIRVLVN-HEVWGEGFALSKKEAEKLAAQQAL 224 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Tropheryma whipplei str. Twist] Sequence ID: Q83FY2.1 Length: 223 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Tropheryma whipplei TW08/27] Sequence ID: Q83I82.2 Length: 223 Range 1: 19 to 207 Score:80.9 bits(198), Expect:1e-17, Method:Compositional matrix adjust., Identities:61/198(31%), Positives:104/198(52%), Gaps:19/198(9%) Query 19 SLLEKALTHVSYS----KKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYL 74 LL A H S+S ++ E LEFLGDA++ + L + P EG LS ++Y+ Sbjct 19 GLLRTAFVHKSFSFENGACQNNERLEFLGDAVLGLVVSHYLFETCPEYTEGQLSAARSYI 78 Query 75 ISEEFFNLLAQKLELHKFIRIKRGK-----INET-IIGDVFEALWAAVYIDSGRDANFTR 128 +S +A++L L +F+ + +G+ +++T ++ D+ E+L AV +D G ++ R Sbjct 79 VSGTSIAQIAKELNLGQFMLLGKGEKLAGGMDKTSLLADLLESLIGAVMVDQGFES--AR 136 Query 129 ELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEA 188 + L E L + E V D KT LQ++T+ + Y +++ EGP H + F Sbjct 137 DFVLALVGEK-LRQVGEFSV-DDPKTKLQKLTRTQLV----YEVVT-EGPPHSRTFKASV 189 Query 189 KIKEYRTLGEGKSKKEAE 206 + E R G+G SKK+A+ Sbjct 190 IVNEKRFFGQGSSKKQAQ 207 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Sphingopyxis alaskensis RB2256] Sequence ID: Q1GTU3.1 Length: 226 Range 1: 8 to 207 Score:80.9 bits(198), Expect:2e-17, Method:Compositional matrix adjust., Identities:64/208(31%), Positives:95/208(45%), Gaps:17/208(8%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 E L +G D +L + ALTH S + + Y+ LEFLGD ++ + L P E Sbjct 8 EALADIIGCIPDDLTLYDLALTHGSTGRAD-YQRLEFLGDRVLGLVLASELYTRFPAASE 66 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYI 118 G +S L S +AQ+L+L IR G+ ++ I D EAL A+++ Sbjct 67 GEMSSRLHVLASGATCAAIAQRLDLPALIRFGAQARSDGGRHSDNIAADAIEALIGALFL 126 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGR--VKKDYKTILQEITQKRWKERPEYRLISVE 176 + G +A T F A+ +G+ K K LQE R + PEY ++S E Sbjct 127 ERGIEAART-------FILAQWGALIDGQQAAPKHPKAALQEWALARGRRPPEYEIVSRE 179 Query 177 GPHHKKKFIVEAKI-KEYRTLGEGKSKK 203 GP H +F + I K R +G SK+ Sbjct 180 GPDHAPRFRIAVSIGKLARAEAQGASKQ 207 >RecName: Full=Ribonuclease 3 2; AltName: Full=Ribonuclease III 2; Short=RNase III 2 [Synechocystis sp. PCC 6803 substr. Kazusa] Sequence ID: Q55637.1 Length: 244 Range 1: 11 to 185 Score:80.5 bits(197), Expect:3e-17, Method:Compositional matrix adjust., Identities:58/182(32%), Positives:97/182(53%), Gaps:20/182(10%) Query 4 LEQLEKKLGYTFK---DKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 L+ L ++LG T D +L++ ALTH S S +++Y+ LEF+GDA+V ++L+++ P Sbjct 11 LKALLRRLGLTDNTPVDWNLVDLALTHASQSPEQNYQQLEFVGDAVVRLASAEVLMKHYP 70 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI-------KRGKINETIIGDVFEALW 113 G +S L+A L+S+ + L +F+ I K G++ +++ D FEAL Sbjct 71 QTSVGEMSALRAILVSDRTLAGWGELYGLDRFLWITPAVLADKNGRV--SLMADSFEALL 128 Query 114 AAVYIDSGRDANFTRELFYKLFKEDIL---SAIKEGRVKKDYKTILQEITQKRWKERPEY 170 A+Y+ G D + R E +L + I++ +YK LQ TQ +K PEY Sbjct 129 GALYLSVG-DLSLIR----PWLSEHLLAKATEIRQDPALHNYKEALQAWTQAHYKCLPEY 183 Query 171 RL 172 R+ Sbjct 184 RV 185 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Gloeobacter violaceus PCC 7421] Sequence ID: Q7NH89.1 Length: 242 Range 1: 33 to 226 Score:80.5 bits(197), Expect:3e-17, Method:Compositional matrix adjust., Identities:62/200(31%), Positives:102/200(51%), Gaps:15/200(7%) Query 20 LLEKALTHVSYSKKEHYET---LEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLIS 76 LL +AL H S+S +E E LEFLGD ++ + L + P G ++ +++ L+S Sbjct 33 LLHRALIHPSWSAQEGGEDNDRLEFLGDEILRLLAAEFLYRADPELTVGEMTAVRSVLVS 92 Query 77 EEFFNLLAQKLELHKFIRIKRGKINE-----TIIGDVFEALWAAVYIDSGRDANFTRELF 131 + LA+ +L +F+ + R + T + D FEA+ A+Y+ +G D R Sbjct 93 DVALAELAEGYDLGEFLVVGRSASGDERGRITRLADGFEAVIGALYLSTG-DLGLIRPWL 151 Query 132 YKLFKEDILSAIKEGRVKKDYKTILQEITQK-RWKERPEYRLISVEGPHHKKKFIVEAKI 190 + ++ + ++K+ LQE+TQK E PEYRL+ P ++ V A Sbjct 152 LPHLAH-LAESVMADPTRGNHKSALQELTQKLAAGELPEYRLVD---PGPPFRYEVWALG 207 Query 191 KEYRTLGEGKSKKEAEQRAA 210 + + + GEG SKK A+QRAA Sbjct 208 RLWGS-GEGPSKKLAQQRAA 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Chlamydia caviae GPIC] Sequence ID: Q823R4.1 Length: 237 Range 1: 7 to 221 Score:80.1 bits(196), Expect:5e-17, Method:Compositional matrix adjust., Identities:73/227(32%), Positives:112/227(49%), Gaps:31/227(13%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQY 58 ++++E KL +TF LL ALTH SY + E E LEFLGDA++ + + L Sbjct 7 IKEVEAKLNFTFTQPKLLVTALTHPSYRNETVTITEDSERLEFLGDAVLCLIVTEHLFLL 66 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEAL 112 P+ EG LS +A LI+ L L + + I +G + + ++FEA+ Sbjct 67 FPSMDEGTLSTARAALINAVSCCQYTDALGLGEHLLIGKGERIQNERGRTSAYANLFEAV 126 Query 113 WAAVYIDSGRDANFTRELFYKLF--KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEY 170 AVY+D G R++ L K+DIL + + K LQ++TQK+ + P Y Sbjct 127 LGAVYLDGGLAP--ARQITVPLLPSKKDILPLM-----LGNPKNRLQQLTQKQLRTLPVY 179 Query 171 RL---ISVEG-PHHKKKFIVEAKIKEYRTLGEGK--SKKEAEQRAAE 211 + S +G P + + IV ++ GEG SKKEAE+ AA+ Sbjct 180 QCTPWTSQQGVPGYHIRVIVNDEV-----WGEGCALSKKEAEKLAAQ 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasmopsis synoviae 53] Sequence ID: Q4A589.1 Length: 231 Range 1: 23 to 222 Score:79.7 bits(195), Expect:6e-17, Method:Compositional matrix adjust., Identities:68/209(33%), Positives:108/209(51%), Gaps:22/209(10%) Query 15 FKDKSLLEKALTHVSYSK----KEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPL 70 +K+ L +A TH +YSK + YE LEFLGD+LV F I D V+ + G LS L Sbjct 23 YKNIDLFIEATTHKTYSKVNKNSKDYERLEFLGDSLVGFLISDYCVREFSSLEPGELSRL 82 Query 71 KAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSGRDA 124 ++ L+ + +AQKL++ + I+ K + ++ DV EAL AA+Y+D G + Sbjct 83 RSKLVDKLALFKIAQKLKVEQIIKTGPKKARNEVLSSSNVLSDVVEALIAAIYLDQGMQS 142 Query 125 --NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKK 182 +F + FY++ + + + KD K+ LQE Q E +Y I + +K+ Sbjct 143 AKDFIKSHFYEIANK------AQNKPNKDPKSELQEYFQTISAETVKYETIEIP---NKR 193 Query 183 KFIVEA-KIKEYRTLGEGKSKKEAEQRAA 210 F +A + + G G SKK+AE+ AA Sbjct 194 SFESKAWHLNKIYGTGVGLSKKDAEKNAA 222 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Pelodictyon luteolum DSM 273] Sequence ID: Q3B6L3.1 Length: 276 Range 1: 73 to 258 Score:80.1 bits(196), Expect:7e-17, Method:Compositional matrix adjust., Identities:66/193(34%), Positives:100/193(51%), Gaps:18/193(9%) Query 39 LEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI--- 95 LEFLGD+++ I + L + P EG LS +A +++ + A+ L+L + I Sbjct 73 LEFLGDSVLGLIISEYLYRRFPEGTEGELSSYRAKIVNGKSLAGFARNLDLGIHLIIGES 132 Query 96 ---KRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDIL-SAIKEGRV--K 149 +R + + + + D FEAL A+Y+D G DA RE +E I+ S E V + Sbjct 133 ADQQRIRTSTSTLADAFEALTGAIYLDRGLDA--VRE----FIEEQIIDSPAFEAMVSTE 186 Query 150 KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKS--KKEAEQ 207 ++K+ L E TQ P Y ++S EG H+K F +E R LG G + KK+AEQ Sbjct 187 NNHKSRLIEHTQSHQLPPPVYTVLSEEGAEHEKTFTIEVSCNGRR-LGRGTALRKKDAEQ 245 Query 208 RAAEELIKLLEES 220 AAEE + LE + Sbjct 246 LAAEEAMGALERA 258 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Oenococcus oeni PSU-1] Sequence ID: Q04GL2.1 Length: 231 Range 1: 8 to 221 Score:78.2 bits(191), Expect:2e-16, Method:Compositional matrix adjust., Identities:64/223(29%), Positives:107/223(47%), Gaps:28/223(12%) Query 7 LEKKLGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 +++ G F ++ LL +A T +Y K Y+ LEFLGD+++ + D L P Sbjct 8 IKEDFGIEFANQDLLLEAFTQGNYLNEHPEEKGRDYQRLEFLGDSVMQLIVADYLFTRYP 67 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWA 114 EG L+ ++ ++ + F+ A+ +++IR+ +G + ++++ D++EA Sbjct 68 AWEEGQLTEMRIAMVQSKSFSHFARLAGFNRYIRLGKGEELSGARNRDSLLEDIWEAFIG 127 Query 115 AVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYR- 171 A+Y D G A FT + AI EG ++ DYK+ LQE+ QK EY+ Sbjct 128 ALYKDQGAKAVFT------FLNKAFFPAIDEGFFEEFIDYKSKLQELLQKAGSVDIEYKV 181 Query 172 ----LISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAA 210 L + PH + V K G G+S K AE+RAA Sbjct 182 ENEDLSDPQKPHFEVTVFVNDKAI---GSGSGRSIKIAEKRAA 221 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Corynebacterium glutamicum ATCC 13032] Sequence ID: Q8NNV6.1 Length: 247 Range 1: 36 to 245 Score:78.2 bits(191), Expect:3e-16, Method:Compositional matrix adjust., Identities:67/214(31%), Positives:112/214(52%), Gaps:15/214(7%) Query 18 KSLLEKALTHVSYSKKE----HYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAY 73 + LL ALTH S++ + + E LEFLGDA++ + + L + P+ E +S ++A Sbjct 36 RDLLVLALTHRSFANENGMLPNNERLEFLGDAVLGLSVANKLYEQYPSSPESDVSKMRAS 95 Query 74 LISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSGRDANFT 127 ++S +A++++L I + +G++ ++I+ D EAL+ A++ G + Sbjct 96 IVSRYGLADIAREIDLGNHILLGKGELLTEGRSKDSILADTTEALFGAIFRQHGFET--A 153 Query 128 RELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVE 187 R++ +LF I +A G + +D+KT LQE +R + EY SV GP H F Sbjct 154 RDVILRLFAYKIDNASARG-IHQDWKTTLQEELAQRKRPMAEYSATSV-GPDHDLVFTAI 211 Query 188 AKI-KEYRTLGEGKSKKEAEQRAAEELIKLLEES 220 + E GEG +KK AEQ AA + + L ES Sbjct 212 VTLEGEEMGRGEGPNKKLAEQEAAHQAFRKLRES 245 >RecName: Full=Endoribonuclease Dicer homolog 2; AltName: Full=Dicer-like protein 2; Short=AtDCL2 [Arabidopsis thaliana] Sequence ID: Q3EBC8.2 Length: 1388 Range 1: 1152 to 1385 Score:79.3 bits(194), Expect:7e-16, Method:Composition-based stats., Identities:70/246(28%), Positives:113/246(45%), Gaps:44/246(17%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKE---HYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +E L Y+F+DKSLL +ALTH SY E Y+ LEFLGD+++++ I L P Sbjct 1152 MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLS 1211 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFI----------------RIKRGKINET---- 103 G L+ +++ ++ E + L+A K LHK I ++ + T Sbjct 1212 PGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWE 1271 Query 104 -------IIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTIL 156 ++GDV E+L A+++DSG + +E+ + K + I VK L Sbjct 1272 SDISFPKVLGDVIESLAGAIFVDSG----YNKEVVFASIKPLLGCMITPETVKLHPVREL 1327 Query 157 QEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELI 214 E+ QK W+ + F VE K KE + + KK A++ A +E++ Sbjct 1328 TELCQK-WQ-------FELSKAKDFDSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVL 1379 Query 215 KLLEES 220 LL+ S Sbjct 1380 NLLKNS 1385 >RecName: Full=Ribonuclease 3 1; AltName: Full=Ribonuclease III 1; Short=RNase III 1 [Nostoc sp. PCC 7120 = FACHB-418] Sequence ID: Q8Z023.1 Length: 228 Range 1: 7 to 208 Score:76.3 bits(186), Expect:1e-15, Method:Compositional matrix adjust., Identities:64/204(31%), Positives:98/204(48%), Gaps:16/204(7%) Query 15 FKDKSLLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSP 69 F+D LL +ALTH SY + EH E LEFLGDA++NF + L + P++ E L+ Sbjct 7 FRDDKLLRRALTHRSYVNENPEEGEHNERLEFLGDAILNFLSGEYLYRSHPDRGEDELTR 66 Query 70 LKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSGRD 123 ++ L+ E+ A ++ L +R+ +G I N ++ FEA+ A Y+D+ + Sbjct 67 RRSALVDEKQLAKFAIEVGLDFKMRLGKGAIRDGGYQNPNLLSSTFEAVIGAYYLDNNSN 126 Query 124 ANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKR-WKERPEYRLISVEGPHHKK 182 R + LF E + I R D K QE Q+ P+Y + G H Sbjct 127 IEAVRAIIEPLF-ESVPEQIVVVRSNVDSKNRFQEWVQRNIGPTPPKYLTEQIGGFSHAP 185 Query 183 KFIVEAKI--KEYRTLGEGKSKKE 204 +F + KEY G GK+KK+ Sbjct 186 EFKATVLVGEKEYGE-GIGKNKKD 208 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Caulobacter sp. K31] Sequence ID: B0T3I0.1 Length: 232 Range 1: 8 to 214 Score:75.5 bits(184), Expect:2e-15, Method:Compositional matrix adjust., Identities:66/211(31%), Positives:106/211(50%), Gaps:15/211(7%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYS----KKEHYETLEFLGDALVNFFIVDLLVQYS 59 + LE+++G+TF D+ LLE ALTH S K E LEF+GD ++ + L + Sbjct 8 VADLERRIGHTFADRKLLELALTHASVGDGAKKAGDNEVLEFIGDRVLGLLAAEALAERF 67 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALW 113 P +EG L+P L+S E +A+ E+ +R+ G+ ++I+ EAL Sbjct 68 PKAKEGELAPRLNALVSRETCARVARGAEMGPALRLSASSSKIGGRETDSILAGAAEALM 127 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLI 173 AA+Y D G + R +F L+ + A +G+ +D KT LQE Q + K P Y + Sbjct 128 AALYRDGGLE--LARRVFLDLWAGEFDLA-NQGK-PRDPKTALQEWAQSQGKPLPTYAVK 183 Query 174 SVEGPHHKKKFIVEAKIKEYRTL-GEGKSKK 203 +GP H F V+ + + EG+S++ Sbjct 184 DRKGPDHAPMFTVQVTVVGLDPVFAEGRSRQ 214 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacteroides fragilis YCH46] Sequence ID: Q64ZV9.1 Length: 290 Range 1: 27 to 238 Score:75.9 bits(185), Expect:3e-15, Method:Compositional matrix adjust., Identities:63/217(29%), Positives:108/217(49%), Gaps:17/217(7%) Query 11 LGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LG+ ++ L E+AL H S + + + E LEFLGDA+++ + D++ Q+ KRE Sbjct 27 LGFYPRNIRLYEQALLHKSTAVRSEKGRPLNNERLEFLGDAILDAIVGDIVYQHFEGKRE 86 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIR--IKRGKINETIIGDVFEALWAAVYIDSGR 122 GFL+ ++ ++ E N LA ++ L K I+ + N + G+ FEA A+Y+D G Sbjct 87 GFLTNTRSKIVQRETLNKLAVEIGLDKLIKYSTRSSSHNSYMYGNAFEAFIGAIYLDRGY 146 Query 123 DANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP----EYRLISVEGP 178 + ++ + E + K R + ++K+ L E +QK E E L P Sbjct 147 EC--CKQFMERRIIEPYIDLDKLSRKEVNFKSKLIEWSQKNKMEVSFELIEQSLDKENNP 204 Query 179 HHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 + + +E + G G SKKE++Q AA+ +K Sbjct 205 VFQTEVRIEGILG---GSGTGYSKKESQQNAAQMTLK 238 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacteroides fragilis NCTC 9343] Sequence ID: Q5LIS2.1 Length: 290 Range 1: 27 to 238 Score:75.9 bits(185), Expect:3e-15, Method:Compositional matrix adjust., Identities:63/217(29%), Positives:108/217(49%), Gaps:17/217(7%) Query 11 LGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LG+ ++ L E+AL H S + + + E LEFLGDA+++ + D++ Q+ KRE Sbjct 27 LGFYPRNIRLYEQALLHKSTAVRSEKGRPLNNERLEFLGDAILDAIVGDIVYQHFEGKRE 86 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIR--IKRGKINETIIGDVFEALWAAVYIDSGR 122 GFL+ ++ ++ E N LA ++ L K I+ + N + G+ FEA A+Y+D G Sbjct 87 GFLTNTRSKIVQRETLNKLAVEIGLDKLIKYSTRSSSHNSYMYGNAFEAFIGAIYLDRGY 146 Query 123 DANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERP----EYRLISVEGP 178 + ++ + E + K R + ++K+ L E +QK E E L P Sbjct 147 EC--CKQFMERRIIEPYIDLDKLSRKEVNFKSKLIEWSQKNKMEVSFELIEQSLDKENNP 204 Query 179 HHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 + + +E + G G SKKE++Q AA+ +K Sbjct 205 VFQTEVRIEGILG---GSGTGYSKKESQQNAAQMTLK 238 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Phocaeicola vulgatus ATCC 8482] Sequence ID: A6KZ76.1 Length: 308 Range 1: 25 to 233 Score:75.9 bits(185), Expect:4e-15, Method:Compositional matrix adjust., Identities:72/220(33%), Positives:112/220(50%), Gaps:29/220(13%) Query 9 KKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLLVQYSPNK 62 K LG+ KD S+ E+AL H S S K + E LEFLGDA+++ + D++ + K Sbjct 25 KMLGFYPKDISIYEQALLHKSLSVKSEKGRLLNNERLEFLGDAILDAVVADIVYKRFEGK 84 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIR--IKRGKINETIIGDVFEALWAAVYIDS 120 REGFL+ ++ ++ E N LA ++ L K I+ ++ N + G+ FEAL A+Y+D Sbjct 85 REGFLTNTRSKIVQRETLNRLAIEIGLDKLIKYTARQSSHNSYMCGNAFEALVGAIYLDR 144 Query 121 GRDANFTRELFYKLFKE-----DILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 G A K F E ++ K R + ++K+ L E +QK E + LI+ Sbjct 145 GYRA-------CKYFMEHRIIGPYINLEKISRKEVNFKSKLIEWSQKNRFE-VTFELITQ 196 Query 176 E-----GPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAA 210 P + + +VE I + G G SKKE++Q AA Sbjct 197 SHDQGYNPTFESEVLVEG-ISGGK--GTGYSKKESQQMAA 233 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma mycoides subsp. mycoides SC str. PG1] Sequence ID: Q6MTC9.1 Length: 232 Range 1: 15 to 226 Score:73.9 bits(180), Expect:8e-15, Method:Compositional matrix adjust., Identities:70/219(32%), Positives:108/219(49%), Gaps:24/219(10%) Query 16 KDKSLLEKALTHVSYSK----KEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLK 71 ++ L +ALTH SY+ K Y+ LEFLGDA++ ++ L EG L+ L+ Sbjct 15 NNEKLFNEALTHNSYANEHKLKYSYQRLEFLGDAILQMYVSRFLFFNYSKLSEGELTRLR 74 Query 72 AYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFEALWAAVYIDSGRDAN 125 A + EE +A+ + L ++ I +G +I+ DVFEAL AA+Y+D D Sbjct 75 ASTVREETLFRVAKDINLGALVKLGHGEYITKGYEKPSILADVFEALTAAIYLDQKEDGL 134 Query 126 FTRELFYKLFKEDILSAIKEGRV---KKDYKTILQEITQKRWKERPEYRLISVE---GPH 179 T L LFK IK+ KD+K+ LQE+ Q + +Y +I E Sbjct 135 VTW-LGQTLFK-----YIKDSNFINDTKDFKSELQELLQSEKRSDLKY-IIEKEDFFANE 187 Query 180 HKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLL 217 +K + V + + +G+G SK+EAEQ AA + + L Sbjct 188 NKILYTVSVNLNGQKFGVGKGFSKQEAEQNAASDCLSKL 226 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma gallisepticum str. R(high)] Sequence ID: D3FH24.1 Length: 655 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma gallisepticum str. F] Sequence ID: D3FI09.1 Length: 655 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma gallisepticum str. R(low)] Sequence ID: Q7NAZ2.2 Length: 655 Range 1: 430 to 590 Score:75.9 bits(185), Expect:8e-15, Method:Compositional matrix adjust., Identities:56/168(33%), Positives:88/168(52%), Gaps:17/168(10%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQ 57 K LE L KK + L E+ALTH SY+ + H Y+ LEFLGDA++N + + L Sbjct 430 KDLELLLKKFKVVTNNIGLYEEALTHNSYANEMHLKYNYQRLEFLGDAIINKIVAEYLFN 489 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG----KINETIIGDVFEALW 113 +S + EG ++ + +I A +LEL +IR+ G ++ I+ D+FEA Sbjct 490 HS-DSSEGEMTKDRIKIIQSNTLIKAATQLELINYIRVGEGLKIAPLSPKILEDIFEAFI 548 Query 114 AAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRV--KKDYKTILQEI 159 A+Y+D G A K+ + I+ ++G++ DYK+I QEI Sbjct 549 GAMYLDQGEYA------VRKILNDTIIGYYQKGQLTENTDYKSIFQEI 590 >RecName: Full=Endoribonuclease dcr-1; Contains: RecName: Full=Death-promoting deoxyribonuclease; Short=tDCR-1 [Caenorhabditis elegans] Sequence ID: P34529.3 Length: 1910 Range 1: 1645 to 1823 Score:73.9 bits(180), Expect:5e-14, Method:Compositional matrix adjust., Identities:54/183(30%), Positives:85/183(46%), Gaps:53/183(28%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKE---HYETLEFLGDALVNFFIVDLLV----QY 58 QLE+K+GY FK+++ L +A TH SY Y+ LEFLGDA++++ I L QY Sbjct 1645 QLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITRYLFEDSRQY 1704 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHK-FIRIKRG------------------- 98 SP G L+ L++ L++ F LA K E K FI + G Sbjct 1705 SP----GVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMIEKFVKLCSERNFDT 1760 Query 99 KINETI----------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 N + +GD+FE++ A+Y+DSGR+ + T ++ + + + Sbjct 1761 NFNAEMYMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAIYLDSGRNLDTTWQVIFHMMR 1820 Query 137 EDI 139 I Sbjct 1821 GTI 1823 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Flavobacterium psychrophilum JIP02/86] Sequence ID: A6GW45.1 Length: 246 Range 1: 20 to 145 Score:71.6 bits(174), Expect:6e-14, Method:Compositional matrix adjust., Identities:42/126(33%), Positives:69/126(54%), Gaps:8/126(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLLVQ 57 +LEK LG+ + + +A TH S +K + +YE LEF+GDA++ I L Sbjct 20 FSKLEKILGFKPLNLTHFRRAFTHRSMNKLDEKGNPMNYERLEFMGDAMLGSVIAAHLFN 79 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI--RIKRGKINETIIGDVFEALWAA 115 SP EG+L+ +++ ++S E N L + L L +F+ ++ E I G++FEA A Sbjct 80 MSPTGDEGYLTKMRSKIVSREHLNELGKDLNLIQFLESKVTLQNFGENIHGNLFEAFVGA 139 Query 116 VYIDSG 121 +Y+D G Sbjct 140 IYLDRG 145 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma pneumoniae FH] Sequence ID: E1QCT1.1 Length: 282 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma pneumoniae M129] Sequence ID: P75233.1 Length: 282 Range 1: 36 to 141 Score:72.0 bits(175), Expect:6e-14, Method:Compositional matrix adjust., Identities:41/106(39%), Positives:58/106(54%), Gaps:6/106(5%) Query 22 EKALTHVSY-----SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLIS 76 E A H SY + Y+ LEFLGDAL++F + L + PN EG L+ K ++ Sbjct 36 EDAFVHSSYVNENEDARASYDRLEFLGDALIDFIVAKKLFELYPNYNEGMLTRTKIEIVK 95 Query 77 EEFFNLLAQKLELHKFIRIKRG-KINETIIGDVFEALWAAVYIDSG 121 E N + ++L FI++ +G ET+ GDV EAL AA+Y D G Sbjct 96 GENLNRIGKELNFGNFIKLGKGMPYTETLFGDVLEALVAAIYEDLG 141 >RecName: Full=Endoribonuclease Dicer [Gallus gallus] Sequence ID: Q25BN1.3 Length: 1921 Range 1: 1665 to 1838 Score:73.2 bits(178), Expect:9e-14, Method:Composition-based stats., Identities:46/174(26%), Positives:79/174(45%), Gaps:41/174(23%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 E EKK+ Y+FK+K+ L +A TH SY + + Y+ LEFLGDA++++ I L + Sbjct 1665 FENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1724 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---------------- 104 G L+ L++ L++ F LA K + HK+ + ++ I Sbjct 1725 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGM 1784 Query 105 ----------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 +GD+FE+L A+Y+DSG +++Y + + Sbjct 1785 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMR 1838 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Sequence ID: Q03VW5.1 Length: 236 Range 1: 12 to 233 Score:70.9 bits(172), Expect:1e-13, Method:Compositional matrix adjust., Identities:63/229(28%), Positives:114/229(49%), Gaps:24/229(10%) Query 9 KKLGYTFKDKSLLEKALTHVSY------SKKEHYETLEFLGDALVNFFIVDLLVQYSPNK 62 KK +F D+SLL +ALT +Y K Y+ LEFLGD+++ + + L + P+ Sbjct 12 KKFNISFNDESLLTEALTQRNYLNEHPDEKGRDYQRLEFLGDSVMQMIVAEYLFKRYPDW 71 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWAAV 116 EG L+ ++ ++ F ++ + L++ IR+ +G + ++++ D++EA A+ Sbjct 72 HEGQLTEMRIAMVQTRSFAHFSRMVHLNEGIRLGKGEEMSGARDRDSLLEDIWEAFIGAL 131 Query 117 YIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYRLIS 174 Y+D G D + + + + +AI + D+K+ LQE Q + +Y+ Sbjct 132 YLDQGAD------VVRQFLNQTLFAAIDTDFFDRFIDFKSRLQERLQTKGSVDIDYQTEK 185 Query 175 VEGPHHKKKFI---VEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEES 220 E + V A KE G GKS K+AE+ AA +K+LE++ Sbjct 186 EEQLSDNTQLFEASVSANDKEL-ARGTGKSIKDAEKAAARAALKILEDN 233 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Spiroplasma citri] Sequence ID: Q53844.1 Length: 248 Range 1: 27 to 238 Score:70.9 bits(172), Expect:1e-13, Method:Compositional matrix adjust., Identities:65/218(30%), Positives:106/218(48%), Gaps:22/218(10%) Query 16 KDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLK 71 K++ +ALTH SY+ + + Y+ +EFLGDA++ I L P+K EG ++ L+ Sbjct 27 KERQYYLEALTHNSYANEHNLSYTYQRMEFLGDAILAKEISLYLFLSFPDKNEGEITNLR 86 Query 72 AYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSGRDAN 125 + ++ E L +++ F+ + +G+I I+ D++E++ AA+Y+D G D Sbjct 87 SKIVREGTLAELVRRMNWAPFLLLGKGEIKTKGYEKNRILADIYESMIAALYLDLGEDVV 146 Query 126 FT---RELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKK 182 T L + I +DYKT LQE Q EY+LI P Sbjct 147 RTFINNTLIRMVSNPGFFDKI------RDYKTELQEFLQAGDARTLEYKLIKESQPLEGN 200 Query 183 K--FIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLL 217 + + V A+I R G G + KEAEQ AA + ++ L Sbjct 201 RVLYTVVAEIGGIRYGEGCGYTHKEAEQLAARDALQKL 238 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma genitalium G37] Sequence ID: P47607.1 Length: 262 Range 1: 34 to 141 Score:71.2 bits(173), Expect:1e-13, Method:Compositional matrix adjust., Identities:40/108(37%), Positives:59/108(54%), Gaps:6/108(5%) Query 20 LLEKALTHVSYSKK-----EHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYL 74 EKA H SY + E Y+ LEFLGDAL++F + L + P EG L+ K + Sbjct 34 FFEKAFIHASYINEHEDVSESYDRLEFLGDALIDFVVAKKLFELYPKYNEGLLTRTKIEI 93 Query 75 ISEEFFNLLAQKLELHKFIRIKRG-KINETIIGDVFEALWAAVYIDSG 121 + E N + +L+L F+++ G ++ E +GDV EAL A+Y D G Sbjct 94 VKGENLNRIGMELKLGDFVKLSNGAELTENTVGDVLEALVGAIYEDMG 141 >RecName: Full=Endoribonuclease Dicer [Cricetulus griseus] Sequence ID: A0MQH0.3 Length: 1917 Range 1: 1661 to 1834 Score:71.6 bits(174), Expect:3e-13, Method:Composition-based stats., Identities:46/174(26%), Positives:78/174(44%), Gaps:41/174(23%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 E EKK+ Y FK+K+ L +A TH SY + + Y+ LEFLGDA++++ I L + Sbjct 1661 FENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1720 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---------------- 104 G L+ L++ L++ F LA K + HK+ + ++ I Sbjct 1721 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM 1780 Query 105 ----------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 +GD+FE+L A+Y+DSG +++Y + + Sbjct 1781 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMR 1834 >RecName: Full=Endoribonuclease Dicer; AltName: Full=Helicase with RNase motif; Short=Helicase MOI [Homo sapiens] Sequence ID: Q9UPY3.3 Length: 1922 Range 1: 1666 to 1839 Score:71.2 bits(173), Expect:4e-13, Method:Composition-based stats., Identities:46/174(26%), Positives:78/174(44%), Gaps:41/174(23%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 E EKK+ Y FK+K+ L +A TH SY + + Y+ LEFLGDA++++ I L + Sbjct 1666 FENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1725 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---------------- 104 G L+ L++ L++ F LA K + HK+ + ++ I Sbjct 1726 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM 1785 Query 105 ----------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 +GD+FE+L A+Y+DSG +++Y + + Sbjct 1786 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMR 1839 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Moorella thermoacetica ATCC 39073] Sequence ID: Q2RJX2.1 Length: 233 Range 1: 26 to 195 Score:69.3 bits(168), Expect:4e-13, Method:Compositional matrix adjust., Identities:49/176(28%), Positives:88/176(50%), Gaps:18/176(10%) Query 21 LEKALTHVSYSKKEHY----ETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLIS 76 L+ ALTH +Y+ + H + LEFLGDA++ + L Q+ P EG L+ ++A ++ Sbjct 26 LDLALTHPTYAFEHHLPGDNQRLEFLGDAVLGLVVATYLYQHFPQLPEGDLTRMRAAVVC 85 Query 77 EEFFNLLAQKLELHKFIRIKRGKINE------TIIGDVFEALWAAVYIDSGRDANFTREL 130 E +A++L + +R+ +G+ + + + D EA+ +VY+ G + R+ Sbjct 86 EASLVKVARRLRVGDLLRLGQGEEHSGGRERPSNLADAMEAIIGSVYLSGGYE--LARDF 143 Query 131 FYKLFKE--DILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKF 184 ++F +ILS D K+ LQE Q + E Y+++ GP H K + Sbjct 144 VLQIFTPALEILSDTS----FIDSKSALQEFVQSQGTENVVYKILEEWGPDHAKGY 195 >RecName: Full=Endoribonuclease Dicer [Bos taurus] Sequence ID: Q6TUI4.3 Length: 1923 Range 1: 1667 to 1840 Score:71.2 bits(173), Expect:4e-13, Method:Composition-based stats., Identities:46/174(26%), Positives:78/174(44%), Gaps:41/174(23%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 E EKK+ Y FK+K+ L +A TH SY + + Y+ LEFLGDA++++ I L + Sbjct 1667 FENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1726 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---------------- 104 G L+ L++ L++ F LA K + HK+ + ++ I Sbjct 1727 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM 1786 Query 105 ----------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 +GD+FE+L A+Y+DSG +++Y + + Sbjct 1787 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMR 1840 >RecName: Full=Endoribonuclease Dicer; AltName: Full=Double-strand-specific ribonuclease mDCR-1 [Mus musculus] Sequence ID: Q8R418.3 Length: 1916 Range 1: 1660 to 1833 Score:71.2 bits(173), Expect:5e-13, Method:Composition-based stats., Identities:46/174(26%), Positives:78/174(44%), Gaps:41/174(23%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 E EKK+ Y FK+K+ L +A TH SY + + Y+ LEFLGDA++++ I L + Sbjct 1660 FETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1719 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---------------- 104 G L+ L++ L++ F LA K + HK+ + ++ I Sbjct 1720 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGM 1779 Query 105 ----------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 +GD+FE+L A+Y+DSG +++Y + + Sbjct 1780 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQ 1833 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Bacteroides thetaiotaomicron VPI-5482] Sequence ID: Q8A2E8.2 Length: 311 Range 1: 27 to 238 Score:70.1 bits(170), Expect:5e-13, Method:Compositional matrix adjust., Identities:65/217(30%), Positives:106/217(48%), Gaps:17/217(7%) Query 11 LGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LG+ + + E+AL H S + + + E LEFLGDA+++ + D++ + KRE Sbjct 27 LGFYPHNIQIYEQALLHKSSAVRSEKGRPLNNERLEFLGDAILDAIVGDIVYKRFEGKRE 86 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIR--IKRGKINETIIGDVFEALWAAVYIDSG- 121 GFL+ ++ ++ E N LA ++ L K I+ + N + G+ FEA A+Y+D G Sbjct 87 GFLTNTRSKIVQRETLNKLAVEIGLDKLIKYSTRSSSHNSYMYGNAFEAFIGAIYLDQGY 146 Query 122 -RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 R F + + + K R + ++K+ L E +QK K + LI H Sbjct 147 ERCKQFMEQRIINRY----IDLDKISRKEVNFKSKLIEWSQKN-KMEVSFELIEQFLDHD 201 Query 181 KKK-FIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIK 215 F E +I+ G G SKKE++Q AA+ IK Sbjct 202 SNPVFQTEVRIEGLPAGTGTGYSKKESQQNAAQMAIK 238 >RecName: Full=Probable ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Acanthamoeba polyphaga mimivirus] Sequence ID: Q5UQT7.1 Length: 538 Range 1: 297 to 531 Score:70.5 bits(171), Expect:5e-13, Method:Compositional matrix adjust., Identities:65/240(27%), Positives:116/240(48%), Gaps:33/240(13%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYS-------------------KKEHYETLEFL 42 +L Q KL D L +A+TH SY +K+ E L+FL Sbjct 297 NLLLQYNTKLPTIDIDLKLFYEAMTHRSYLIRKNLPNRDVPKSKSIVRLQKKSNERLQFL 356 Query 43 GDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR----- 97 GDA+++F I + L + EG+L+ L+ L + E LA++ ++ ++ I + Sbjct 357 GDAVIHFIIGEYLFNKYADSGEGYLTRLRCKLENSESLFFLAKQSDISSYLLISQNIEVL 416 Query 98 -GKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDI-LSAIKEGRVKKDYKT- 154 G+ N IIG EA A+Y++ G ++ ++ + ++ ++ I E +YK Sbjct 417 HGRENVNIIGGGLEAFVGALYLNIGLGT--VKQFLLEIMRIELDINQIAENET--NYKDL 472 Query 155 ILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKI-KEYRTLGEGKSKKEAEQRAAEEL 213 ILQ + +W P Y+++ EGP H K F + + + +G+ SKK+AEQ A++++ Sbjct 473 ILQLYNKNKWG-HPVYKILKEEGPDHCKIFTMGLYLGNKLMGIGKASSKKKAEQIASKKM 531 Range 2: 40 to 240 Score:62.8 bits(151), Expect:2e-10, Method:Compositional matrix adjust., Identities:61/206(30%), Positives:104/206(50%), Gaps:14/206(6%) Query 15 FKDKSLLEKALTHVSYSKKEH---YETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLK 71 + D + E+A+ HVS +E YE LE+LGDA+ + I + + EGFL+ L+ Sbjct 40 YVDMHIFEEAMLHVSTIYEESDKTYERLEYLGDAIFHMIITEYFYHRYNEENEGFLTRLR 99 Query 72 AYLISEEFFNLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELF 131 + + L++ L L+ F++I +N+ I+ D+FE+ A Y++ G +TR Sbjct 100 IRIERGDSMVELSKNLGLNNFVQIYGISLNDHILEDIFESFIGAFYLNFG--MKYTRLFI 157 Query 132 YKLF-KEDILSAIKEGRVKKDYKT-ILQEITQKRWKERPEYRLISVEGP--HHKKKFIVE 187 KL K LS + +YK +L+ Q +W P+Y V P + + KFI + Sbjct 158 IKLIEKHKNLSELIA--YDDNYKDLLLRYFHQMKWG-HPKYIEEIVIDPKNNQRNKFISK 214 Query 188 AKIKEYRTLGEG--KSKKEAEQRAAE 211 K + +G G +KK++EQ A++ Sbjct 215 VKNPFDKVIGIGSASTKKKSEQLASQ 240 >RecName: Full=Endoribonuclease Dicer [Danio rerio] Sequence ID: Q6TV19.2 Length: 1865 Range 1: 1612 to 1782 Score:70.5 bits(171), Expect:7e-13, Method:Composition-based stats., Identities:45/171(26%), Positives:77/171(45%), Gaps:41/171(23%) Query 7 LEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 E K+ YTFK+K+ L +A TH SY + + Y+ LEFLGDA++++ I L + Sbjct 1612 FESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 1671 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI------------------- 104 G L+ L++ L++ F LA K + HK+ + ++ I Sbjct 1672 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSE 1731 Query 105 -------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 +GD+FE+L A+Y+DSG +++Y + + Sbjct 1732 LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMR 1782 >RecName: Full=Endoribonuclease Dcr-1; Short=Protein dicer-1 [Drosophila melanogaster] Sequence ID: Q9VCU9.1 Length: 2249 Range 1: 1993 to 2168 Score:70.5 bits(171), Expect:7e-13, Method:Composition-based stats., Identities:46/176(26%), Positives:79/176(44%), Gaps:40/176(22%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKK---EHYETLEFLGDALVNFFIVDLLVQYSP 60 E+ E+ LGY F+D+S L +A+TH SY+ + Y+ LEFLGDA++++ I L + Sbjct 1993 FEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPR 2052 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---------------- 104 G L+ L++ L++ F LA + HKF R +N+ I Sbjct 2053 QHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISE 2112 Query 105 ---------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDI 139 +GDVFE++ A+++DS + ++ + +I Sbjct 2113 EYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEI 2168 >RecName: Full=Endoribonuclease Dicer [Xenopus tropicalis] Sequence ID: B3DLA6.2 Length: 1893 Range 1: 1637 to 1810 Score:70.5 bits(171), Expect:8e-13, Method:Composition-based stats., Identities:46/174(26%), Positives:77/174(44%), Gaps:41/174(23%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 E EKK+ Y FK+K+ L +A TH SY + + Y+ LEFLGDA++++ I L + Sbjct 1637 FENFEKKINYPFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1696 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---------------- 104 G L+ L++ L++ F LA K + HK+ + ++ I Sbjct 1697 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGM 1756 Query 105 ----------------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 +GD+FE+L A+Y+DSG ++Y + + Sbjct 1757 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQ 1810 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease DCL-1; Includes: RecName: Full=ATP-dependent helicase DCL-1 [Cryphonectria parasitica] Sequence ID: Q2VF19.1 Length: 1548 Range 1: 1245 to 1422 Score:69.3 bits(168), Expect:2e-12, Method:Compositional matrix adjust., Identities:47/178(26%), Positives:71/178(39%), Gaps:46/178(25%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS----YSKKEHYETLEFLGDALVNFFIVDLLV 56 + M +++ + GY FK +L A H S + K HY+ LEFLGDAL + VD L Sbjct 1245 LDMAQKIHEATGYQFKHPRVLRSAFRHPSRPYVFDKVPHYQRLEFLGDALFDMACVDYLF 1304 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI------------ 104 +P++ +L+ K ++S +F LA L HKFI I I Sbjct 1305 HIAPDEGPQWLTEHKMAMVSNQFLGCLAVSLGFHKFILHHHASIGSQIHEYVTEITEARR 1364 Query 105 ------------------------------IGDVFEALWAAVYIDSGRDANFTRELFY 132 I DV EA A+++DS D + ++ F+ Sbjct 1365 AAEDAAEAAGKPRSAYSRDYWVEAPQPPKCIPDVLEAYVGAIFVDSKYDYSVVQQFFH 1422 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Sequence ID: B6YQI6.1 Length: 261 Range 1: 23 to 233 Score:67.8 bits(164), Expect:2e-12, Method:Compositional matrix adjust., Identities:61/213(29%), Positives:107/213(50%), Gaps:10/213(4%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKE------HYETLEFLGDALVNFFIVDLLVQYSP 60 L + LG+ K+ S+ EKAL H S SK++ + E LEFLGDA+ N I +L + P Sbjct 23 LYRMLGFPPKNFSIYEKALLHKSSSKRDENGCYQNNERLEFLGDAIFNAIIAVILYKKFP 82 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK-RGKINETIIGDVFEALWAAVYID 119 EGFL+ ++ ++ + + +A +L ++ I I + K ++ I+G+ EA A+Y+D Sbjct 83 TNDEGFLTNTRSKIVKRDTLDKIAYQLGINHLIMISAKVKNHKHIMGNTLEAFIGAIYLD 142 Query 120 SGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPH 179 G T+E K + R + ++K+ L E QK L + + Sbjct 143 KGYLK--TKEFVEKRIINPYIDIDTLVREEVNFKSKLFEWCQKHKILLQFQTLENFTDNN 200 Query 180 HKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAE 211 F ++A + + +G G SK+E++Q A++ Sbjct 201 RNVVFQIQALLNNHIAGIGIGYSKRESQQHASQ 233 >RecName: Full=Ribonuclease 3; AltName: Full=Protein drosha; AltName: Full=Ribonuclease III; Short=RNase III [Caenorhabditis elegans] Sequence ID: O01326.2 Length: 1086 Range 1: 830 to 1058 Score:68.9 bits(167), Expect:2e-12, Method:Compositional matrix adjust., Identities:65/234(28%), Positives:103/234(44%), Gaps:21/234(8%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSK----KEHYETLEFLGDALVNFFIVDLLV 56 + LE++LG F + LL KA T + K H + LE+LGD+++ + D L Sbjct 830 LSTFHALEERLGIQFNNIRLLAKAFTRRNIPNNDLTKGHNQRLEWLGDSVLQLIVSDFLY 889 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETII---GDVFEALW 113 + P EG +S L+ L+S + ++ L +F+ K E + D+ EA Sbjct 890 RRFPYHHEGHMSLLRTSLVSNQTQAVVCDDLGFTEFVIKAPYKTPELKLKDKADLVEAFI 949 Query 114 AAVYIDSGRDAN--FTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT------QKRWK 165 A+Y+D G + F R +F K I E D K+ LQ+ Sbjct 950 GALYVDRGIEHCRAFIRIVFCPRLKHFI-----ESEKWNDAKSHLQQWCLAMRDPSSSEP 1004 Query 166 ERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSK-KEAEQRAAEELIKLLE 218 + PEYR++ +EGP + + F + K R +S +AE R AE + LE Sbjct 1005 DMPEYRVLGIEGPTNNRIFKIAVYYKGKRLASAAESNVHKAELRVAELALANLE 1058 Range 2: 689 to 794 Score:42.7 bits(99), Expect:0.001, Method:Compositional matrix adjust., Identities:29/106(27%), Positives:51/106(48%), Gaps:9/106(8%) Query 35 HYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR 94 H E LE+LGDA+V + L + EG L+ + L+ LA+ + + ++ Sbjct 689 HNERLEYLGDAVVELIVSHHLYFMLTHHFEGGLATYRTALVQNRNLATLAKNCRIDEMLQ 748 Query 95 IKRGK--IN----ETIIGDVFEALWAAVYIDSG---RDANFTRELF 131 G IN + + + FEA+ AA+Y+D G D F++ ++ Sbjct 749 YSHGADLINVAEFKHALANAFEAVMAAIYLDGGLAPCDVIFSKAMY 794 >RecName: Full=Protein Dicer; AltName: Full=Cell cycle control protein dcr1; AltName: Full=RNA interference pathway protein dcr1; Includes: RecName: Full=Endoribonuclease dcr1; Includes: RecName: Full=ATP-dependent helicase dcr1 [Schizosaccharomyces pombe 972h-] Sequence ID: Q09884.1 Length: 1374 Range 1: 1086 to 1233 Score:68.2 bits(165), Expect:5e-12, Method:Compositional matrix adjust., Identities:42/148(28%), Positives:71/148(47%), Gaps:33/148(22%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYSPNK 62 +E+ +GY+FK+K LL A H S + E+Y+ LEFLGDA++++ IV L + PN Sbjct 1086 IEETIGYSFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNA 1145 Query 63 REGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI------------------ 104 G L+ K++ + + + + L LHK+I+ + + + I Sbjct 1146 TSGELTDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFRETASENP 1205 Query 105 -----------IGDVFEALWAAVYIDSG 121 I D EA+ A+++DSG Sbjct 1206 WFWFEIDSPKFISDTLEAMICAIFLDSG 1233 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Ureaplasma parvum serovar 3 str. ATCC 700970] Sequence ID: Q9PQT8.1 Length: 236 Range 1: 18 to 231 Score:66.2 bits(160), Expect:6e-12, Method:Compositional matrix adjust., Identities:65/223(29%), Positives:109/223(48%), Gaps:28/223(12%) Query 16 KDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYS--PNKR-----E 64 K+ S+ +ALTH SY+ + ++Y+ LEFLGDA V + I + + Y N++ E Sbjct 18 KNLSIYLEALTHKSYANEHKLTKNYQRLEFLGDACVEWVISNFIFNYKIKDNEKMRSLDE 77 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWAAVYI 118 G ++ ++ ++ E + A+ L L F+ I G E I D+FEA AV Sbjct 78 GEMTRARSNMVRSEILSYAAKDLGLTDFLMIGVGLEQDQSARMEKIYEDIFEAFIGAVAQ 137 Query 119 DSGRDANFTRELFYKLFKEDILSAIKEGRV--KKDYKTILQEITQKRWKERPEYRLISVE 176 D G + ++ ++ +EG++ +KDYKTI QE Q+ K+ Y+L+ E Sbjct 138 DQGIKK------VSLILEKTLIKYFREGQINYQKDYKTIFQEQAQRINKKPIMYKLVRNE 191 Query 177 GPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 G + + I +G ++KEAE AA+ I L++ Sbjct 192 GDKKEVHLVWNDLI---YGIGIASTRKEAEILAAKNAILKLDD 231 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Prochlorococcus marinus subsp. marinus str. CCMP1375] Sequence ID: G3XCR8.1 Length: 249 Range 1: 32 to 247 Score:66.2 bits(160), Expect:6e-12, Method:Compositional matrix adjust., Identities:61/224(27%), Positives:114/224(50%), Gaps:18/224(8%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +E ++K Y K +L +ALTH S++ ++E LEF GDA++ + + + P Sbjct 32 IEVIKKNEDYCLK---ILNEALTHTSFNLSINHERLEFQGDAVLRLAASEYIQSHFPKLS 88 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIRI-----KRGKINETIIGDVFEALWAAVYI 118 G S L+A L+S+ + + K+ + + I K +TI + EAL A+Y Sbjct 89 VGDRSALRAQLVSDRWLAKVGYKIGIKTTMLIANKALKDEAATDTICAEGTEALIGALY- 147 Query 119 DSGRDANFTR---ELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISV 175 + R+ + + E ++ + E++L+ K++ K+ LQE +Q + +P Y + + Sbjct 148 ECLRNIDAIQNWLEPYWNIESEEVLADPH----KQNEKSALQEWSQGQGLNKPIYTIKEI 203 Query 176 EGPHHK-KKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLL 217 H K+F I+ ++R G G S+K+A++ AA+E +K L Sbjct 204 SKQHGDLKRFYCTVHIQNDFRGEGWGSSRKKAQKEAAKEALKKL 247 >RecName: Full=Endoribonuclease Dicer homolog 3a; AltName: Full=Dicer-like protein 3a; Short=OsDCL3a [Oryza sativa Japonica Group] Sequence ID: Q5N870.1 Length: 1651 Range 1: 1239 to 1481 Score:67.0 bits(162), Expect:1e-11, Method:Compositional matrix adjust., Identities:68/254(27%), Positives:114/254(44%), Gaps:47/254(18%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVS---YSKKEHYETLEFLGDALVNFFIVDLLVQY 58 + E LE KLGY+F K LL +ALTH S K YE LEFLGDA+++ + L Sbjct 1239 NVFEMLEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNS 1298 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG----KINE------------ 102 + EG L+ L++ ++ E F +A K H F++ G +I E Sbjct 1299 HKDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDK 1358 Query 103 ------------TIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAI--KEGRV 148 ++GD+ E++ A+ +D+ D + +F E +LS I E Sbjct 1359 VELLSDGLPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIF-----EPLLSPIVTPENLE 1413 Query 149 KKDYKTILQEITQKRWKERPEYRL-ISVEGPHHKKKFIVEAKIKEYRTLGEG--KSKKEA 205 Y+ +++ W + Y + I+ ++ ++KE + +G K +K+A Sbjct 1414 LPPYRELIE------WCGKHGYFVGINCRDQGDTVVATLDVQLKEVLLVRQGFSKKRKDA 1467 Query 206 EQRAAEELIKLLEE 219 + A+ L+K LEE Sbjct 1468 KAHASSLLLKDLEE 1481 Range 2: 1028 to 1123 Score:41.6 bits(96), Expect:0.003, Method:Compositional matrix adjust., Identities:26/96(27%), Positives:50/96(52%), Gaps:2/96(2%) Query 1 MKMLEQLEKKLGYTFKDKS--LLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQY 58 + + QL ++GY+ + S L+ +A+T + S+ E LE LGD+++ + + L Sbjct 1028 LTLASQLRSEIGYSDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLK 1087 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR 94 PNK EG LS ++ ++I L + + ++R Sbjct 1088 FPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVR 1123 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease dcl1; Includes: RecName: Full=ATP-dependent helicase dcl1 [Aspergillus oryzae RIB40] Sequence ID: Q2U6C4.2 Length: 1523 Range 1: 1243 to 1335 Score:67.0 bits(162), Expect:1e-11, Method:Compositional matrix adjust., Identities:39/93(42%), Positives:54/93(58%), Gaps:4/93(4%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSY----SKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 ++E+KLGY FK LL A TH SY +K Y+ LEFLGD+L++ VD L P+ Sbjct 1243 KVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGDSLLDMVCVDDLFYRYPD 1302 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIR 94 K +L+ K ++S +F LA KL LH +R Sbjct 1303 KDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLR 1335 >RecName: Full=Ribonuclease 3; AltName: Full=Protein drosha; AltName: Full=Ribonuclease III; Short=RNase III [Caenorhabditis briggsae] Sequence ID: Q61XX9.1 Length: 1061 Range 1: 811 to 1003 Score:66.6 bits(161), Expect:1e-11, Method:Compositional matrix adjust., Identities:54/194(28%), Positives:94/194(48%), Gaps:12/194(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALT--HVSYS--KKEHYETLEFLGDALVNFFIVDLLVQYS 59 +LE+ +G F + LL KA T +V ++ K H + LE+LGD+++ I D L + Sbjct 811 FHRLEQIIGIEFNNIRLLAKAFTRRNVPFNDLTKGHNQRLEWLGDSVLQLIISDYLYRNF 870 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETII---GDVFEALWAAV 116 P EG +S L+ L+S + +++ L +F+ + N+ + D+ EA A+ Sbjct 871 PLHHEGHMSLLRTSLVSNQTQSVVCDDLGFQEFVIKAPHRKNDLKMKDKADLVEAFIGAL 930 Query 117 YIDSGRD--ANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKER--PEYRL 172 Y+D G + +F R +F K +++ K K + I R PEYRL Sbjct 931 YVDKGLEYCRSFIRTVFCPRLKH-FINSEKWNDAKSHLQQWCLAIRDSRNPNPAMPEYRL 989 Query 173 ISVEGPHHKKKFIV 186 + ++GP + + F V Sbjct 990 LGIQGPTNNRIFRV 1003 Range 2: 667 to 774 Score:43.9 bits(102), Expect:6e-04, Method:Compositional matrix adjust., Identities:33/108(31%), Positives:51/108(47%), Gaps:9/108(8%) Query 35 HYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR 94 H E LE+LGDA+V L + EG L+ + L+ LA + + ++ Sbjct 667 HNERLEYLGDAVVELIASHHLFFILNHHFEGGLATYRTALVQNRNLAKLAMNCRIDEMLQ 726 Query 95 IKRGK--INET----IIGDVFEALWAAVYIDSG---RDANFTRELFYK 133 G INE + + FEAL A V++DSG DA F++ ++ K Sbjct 727 FAHGADLINEAEWKHALANAFEALMAGVFLDSGIAPCDAIFSKAMYGK 774 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease DCL1; Includes: RecName: Full=ATP-dependent helicase DCL1 [Coccidioides immitis RS] Sequence ID: Q1DKI1.3 Length: 1500 Range 1: 1220 to 1389 Score:66.2 bits(160), Expect:2e-11, Method:Compositional matrix adjust., Identities:48/170(28%), Positives:75/170(44%), Gaps:34/170(20%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSY----SKKEHYETLEFLGDALVNFFIVDLLV 56 + + Q++KKLGY FK LL A TH SY ++ Y+ LEFLGDAL++ V+ + Sbjct 1220 LDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGDALLDMACVEHIY 1279 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR---------------------I 95 P+K +L+ K ++S +F +A +L LH + + Sbjct 1280 HKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAEL 1339 Query 96 KRGKINET---------IIGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 + G + + D+ EA A++IDSG E F K K Sbjct 1340 ESGDPPDAWTLTSDPPKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLK 1389 >RecName: Full=Ribonuclease 3-like protein 2; AltName: Full=Ribonuclease III-like protein 2; Short=RNase III-like protein 2; AltName: Full=Ribonuclease three-like protein 2 [Arabidopsis thaliana] Sequence ID: Q9LTQ0.1 Length: 391 Range 1: 57 to 214 Score:65.5 bits(158), Expect:2e-11, Method:Compositional matrix adjust., Identities:46/162(28%), Positives:76/162(46%), Gaps:30/162(18%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M+ +E +EK L Y F +KSLL++A+TH S + YE LEF+GD+ + I + L P Sbjct 57 MESMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYP 116 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE------------------ 102 + LS L+A +S E ++ L+ F+R ++E Sbjct 117 SLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVS 176 Query 103 --------TIIGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 ++ D+FE+L AVY+ D NF + + +F+ Sbjct 177 YGGLVKAPKVLADLFESLAGAVYV----DVNFDLQRLWVIFR 214 >RecName: Full=Ribonuclease 3-like protein 3; AltName: Full=Ribonuclease III-like protein 3; Short=RNase III-like protein 3 [Oryza sativa Japonica Group] Sequence ID: Q69KJ0.1 Length: 299 Range 1: 42 to 194 Score:64.3 bits(155), Expect:5e-11, Method:Compositional matrix adjust., Identities:50/158(32%), Positives:80/158(50%), Gaps:33/158(20%) Query 7 LEKKLGYTFKDKSLLEKALTHVS----YSKKEHYETLEFLGDALVNFFIV-DLLVQYSPN 61 +E LGY F+DK+L+E+ALTH S Y YE LE+LGDA++ + ++ + Y Sbjct 42 VESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLTYG-Q 100 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR----GKINETI------------- 104 + G L+ L+A + +E +A LH F+R K G+I + I Sbjct 101 LQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIEELSMYPIHSNGL 160 Query 105 ------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 + DV E+L A+Y DS NF +E+ +++F+ Sbjct 161 LDPPKVLCDVVESLIGAIYCDS----NFNQEIVWQVFQ 194 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease DCL1; Includes: RecName: Full=ATP-dependent helicase DCL1 [Pyricularia oryzae 70-15] Sequence ID: A4RKC3.2 Length: 1591 Range 1: 1240 to 1336 Score:64.7 bits(156), Expect:6e-11, Method:Composition-based stats., Identities:33/97(34%), Positives:56/97(57%), Gaps:4/97(4%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLV 56 +++ Q++ K+GY FK+ LL A H SY ++ Y+ LEFLGD+L++ VD L Sbjct 1240 LELCSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENIPSYQRLEFLGDSLLDMVCVDYLF 1299 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI 93 + P+K +L+ K ++S +FF +A L H+ + Sbjct 1300 KKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRHL 1336 >RecName: Full=Ribonuclease 3; AltName: Full=Protein Drosha; AltName: Full=Ribonuclease III; Short=RNase III; AltName: Full=p241 [Homo sapiens] Sequence ID: Q9NRR4.2 Length: 1374 Range 1: 1104 to 1330 Score:64.3 bits(155), Expect:1e-10, Method:Composition-based stats., Identities:59/235(25%), Positives:111/235(47%), Gaps:28/235(11%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALT-------HVSYSKKEHYETLEFLGDALVNFFIVD 53 ++ L + E+ +G F LL +A T H++ H + +EFLGD+++ + Sbjct 1104 LQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLG---HNQRMEFLGDSIMQLVATE 1160 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI----RIKRG-KINETIIGDV 108 L + P+ EG L+ L++ L++ +A++L + ++ + KR + + D+ Sbjct 1161 YLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADL 1220 Query 109 FEALWAAVYIDSGRD--ANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEI-----TQ 161 E+ AA+YID + F F+ KE IL+ + D K+ LQ+ T+ Sbjct 1221 LESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILN-----QDWNDPKSQLQQCCLTLRTE 1275 Query 162 KRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIK 215 + + P Y+ + GP H + + V K R G+G S ++AE AA + ++ Sbjct 1276 GKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALE 1330 Range 2: 960 to 1071 Score:52.4 bits(124), Expect:9e-07, Method:Composition-based stats., Identities:37/114(32%), Positives:58/114(50%), Gaps:8/114(7%) Query 31 SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELH 90 S+ H E LEFLGDA+V F L P+ EG L+ + ++ + +LA+KLEL Sbjct 960 SRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELD 1019 Query 91 KFIRIKRGK--INET----IIGDVFEALWAAVYIDSGRDANFTRELFYKLFKED 138 +F+ G E+ + + FEAL AVY++ + ++LF +L D Sbjct 1020 RFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEE--AKQLFGRLLFND 1071 >RecName: Full=Ribonuclease 3; AltName: Full=Protein Drosha; AltName: Full=Ribonuclease III; Short=RNase III [Mus musculus] Sequence ID: Q5HZJ0.1 Length: 1373 Range 1: 1103 to 1329 Score:63.5 bits(153), Expect:2e-10, Method:Composition-based stats., Identities:56/230(24%), Positives:107/230(46%), Gaps:18/230(7%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALT-------HVSYSKKEHYETLEFLGDALVNFFIVD 53 ++ L + E+ +G F LL +A T H++ H + +EFLGD+++ + Sbjct 1103 LQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLG---HNQRMEFLGDSIMQLVATE 1159 Query 54 LLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI----RIKRG-KINETIIGDV 108 L + P+ EG L+ L++ L++ +A++L + ++ + KR + + D+ Sbjct 1160 YLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADL 1219 Query 109 FEALWAAVYIDSGRD--ANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKE 166 E+ AA+YID + F F+ KE IL+ + + L T+ + + Sbjct 1220 LESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPD 1279 Query 167 RPEYRLISVEGPHHKKKFIVEAKIKEYRT-LGEGKSKKEAEQRAAEELIK 215 P Y+ + GP H + + V K R G+G S ++AE AA + ++ Sbjct 1280 IPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALE 1329 Range 2: 959 to 1070 Score:52.0 bits(123), Expect:1e-06, Method:Composition-based stats., Identities:37/114(32%), Positives:58/114(50%), Gaps:8/114(7%) Query 31 SKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELH 90 S+ H E LEFLGDA+V F L P+ EG L+ + ++ + +LA+KLEL Sbjct 959 SRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELD 1018 Query 91 KFIRIKRGK--INET----IIGDVFEALWAAVYIDSGRDANFTRELFYKLFKED 138 +F+ G E+ + + FEAL AVY++ + ++LF +L D Sbjct 1019 RFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEE--AKQLFGRLLFND 1070 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Leuconostoc citreum KM20] Sequence ID: B1N016.1 Length: 233 Range 1: 18 to 217 Score:61.6 bits(148), Expect:2e-10, Method:Compositional matrix adjust., Identities:53/207(26%), Positives:102/207(49%), Gaps:24/207(11%) Query 15 FKDKSLLEKALTHVSYSKKEH-------YETLEFLGDALVNFFIVDLLVQYSPNKREGFL 67 F +++LL +ALT +Y EH Y+ LEFLGD+++ + + L + PN EG L Sbjct 18 FNNETLLLEALTQRNY-LNEHPDEPGRDYQRLEFLGDSVMQVSVAEYLFKRYPNWHEGQL 76 Query 68 SPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWAAVYIDSG 121 + ++ ++ F ++ L++ IR+ +G + ++++ D++EA A+Y+D G Sbjct 77 TEMRIAMVQTRSFAHFSRVAHLNEGIRLGKGEEMSGARDRDSLLEDIWEAFIGALYLDQG 136 Query 122 RDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYRLISVEG-P 178 +A K + + +A+ + D+K+ LQE QK +YR + + Sbjct 137 FEA------VRKFLDQTLFAAVDTDFFDRFIDFKSRLQEKLQKNGAVDIDYRTENEQQLS 190 Query 179 HHKKKFIVEAKIKEYR-TLGEGKSKKE 204 H+ + F + ++ G GKS K+ Sbjct 191 HNAQLFEASVSVDDHELARGTGKSIKD 217 >RecName: Full=Endoribonuclease Dicer homolog 4; AltName: Full=Dicer-like protein 4; Short=OsDCL4; AltName: Full=Protein SHOOT ORGANIZATION 1 [Oryza sativa Japonica Group] Sequence ID: A7LFZ6.1 Length: 1657 Range 1: 1217 to 1449 Score:63.2 bits(152), Expect:2e-10, Method:Compositional matrix adjust., Identities:59/240(25%), Positives:102/240(42%), Gaps:36/240(15%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKKE--HYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LE+ +GY FK K LL +A H S+S+ Y+ LEFLGDA++ + I L P+ + Sbjct 1217 LEELIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKP 1276 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI-------------------- 104 G ++ L++ + + A + +HK + + I Sbjct 1277 GQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEEP 1336 Query 105 -----IGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEI 159 +GD+ E+ AV +DSG + N+ ++ L K + A ++ L+E+ Sbjct 1337 ACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRE----LREL 1392 Query 160 TQKRWKERPEYRLISVEGPHHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLL 217 Q E + + +G +H K VE IK ++ K A + AA+E + L Sbjct 1393 CQCHGFELGLPKPMKADGEYHVK---VEVNIKSKIIICTAANRNSKAARKFAAQETLSKL 1449 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease dcl1; Includes: RecName: Full=ATP-dependent helicase dcl1 [Aspergillus terreus NIH2624] Sequence ID: Q0CW42.2 Length: 1519 Range 1: 1232 to 1325 Score:63.2 bits(152), Expect:2e-10, Method:Composition-based stats., Identities:35/94(37%), Positives:56/94(59%), Gaps:4/94(4%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSY----SKKEHYETLEFLGDALVNFFIVDLLV 56 + + ++E+KLGY F+ LL A TH SY ++ Y++LEFLGDAL++ V+ L Sbjct 1232 IDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSLEFLGDALLDMVCVEDLF 1291 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELH 90 + P++ +L+ K ++S +F LA KL LH Sbjct 1292 RRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLH 1325 >RecName: Full=Ribonuclease 3-like protein 2; AltName: Full=Ribonuclease III-like protein 2; Short=RNase III-like protein 2 [Oryza sativa Japonica Group] Sequence ID: Q6ATG6.2 Length: 317 Range 1: 39 to 225 Score:61.6 bits(148), Expect:4e-10, Method:Compositional matrix adjust., Identities:60/197(30%), Positives:90/197(45%), Gaps:47/197(23%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSYSKKE-HYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 ++E+ L Y F+D LLE+ALTH S++ Y+ LEF+GD+ + + L +P Sbjct 39 RVERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGP 98 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIR-------IKRGKINET-------------- 103 G LS L+A IS E +A + +L+ +R + G+ ET Sbjct 99 GPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPY 158 Query 104 ---------IIGDVFEALWAAVYIDSGRDA----NFTRELFYKLFKEDILSA--IKEGRV 148 ++ D+ EA+ AAVY+D D TR LF E I++A I E V Sbjct 159 GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLF-----EPIITAETIDEQPV 213 Query 149 KKDYKTILQEITQKRWK 165 T+L E+ QK K Sbjct 214 -----TMLHELCQKHGK 225 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Mycoplasma mobile 163K] Sequence ID: Q6KHN3.1 Length: 246 Range 1: 21 to 228 Score:60.5 bits(145), Expect:7e-10, Method:Compositional matrix adjust., Identities:67/214(31%), Positives:104/214(48%), Gaps:17/214(7%) Query 15 FKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPL 70 FKD +ALTH +Y+ + E Y+ LEF+GDA++ + Q+ N EG S + Sbjct 21 FKDIKYYIQALTHKTYANEHANIESYDILEFIGDAILQMKSSIFIFQHFQNITEGEASLI 80 Query 71 KAYLISEEFFNLLAQKLELHKFIRIKRG----KINETIIGDVFEALWAAVYIDSGRD--A 124 +A + + L++KL L K + I +G + N I D+FE+ AA+Y+D G + Sbjct 81 RAKNVCSSGLSELSKKLGLSKLLLISKGSEHLRENVKINADLFESFVAAIYLDLGDEKLE 140 Query 125 NFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKF 184 F +E+FY L +I KD K+ QE Q E EY++ +E + F Sbjct 141 EFLKEIFYPYISTTNLESI------KDPKSSFQEYIQSYSNEIIEYKITQLENELRSELF 194 Query 185 IVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLL 217 E +G GK+KK AE+ AA ++ L Sbjct 195 KAELMHNGITYGVGFGKTKKVAEEEAATRALETL 228 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease dcl2; Includes: RecName: Full=ATP-dependent helicase dcl2 [Aspergillus nidulans FGSC A4] Sequence ID: P0C5H7.1 Length: 1429 Range 1: 1057 to 1143 Score:61.2 bits(147), Expect:1e-09, Method:Composition-based stats., Identities:32/87(37%), Positives:53/87(60%), Gaps:3/87(3%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 E LE +GYTFKDK+LL +ALTH S + + Y+ LEFLGDA+++ IVDL+ + Sbjct 1057 ENLENHIGYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVE 1116 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLE 88 ++G ++ +K +++ L + + Sbjct 1117 CQQGEMTKIKHAIVNGHLLAFLCMQFK 1143 Range 2: 887 to 1014 Score:42.4 bits(98), Expect:0.002, Method:Composition-based stats., Identities:37/132(28%), Positives:54/132(40%), Gaps:29/132(21%) Query 15 FKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSP----- 69 F+D + A+T Y+ EF GD+++ F + L +PN EG+L+ Sbjct 887 FQDLRHVITAITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHAL 946 Query 70 --------------LKAYLISEEFF------NLLAQKLELHKFIRIKRGKINETIIGDVF 109 L AY+IS F L+++KL R K ++ DV Sbjct 947 VQNARLTRAALDQGLDAYIISNRFTPRKWSAPLISEKLYASASTRSMSAK----VLADVV 1002 Query 110 EALWAAVYIDSG 121 EAL A YID G Sbjct 1003 EALIGAAYIDGG 1014 >RecName: Full=Dicer-like protein 4 [Arabidopsis thaliana] Sequence ID: P84634.2 Length: 1702 Range 1: 1292 to 1530 Score:60.5 bits(145), Expect:2e-09, Method:Compositional matrix adjust., Identities:59/252(23%), Positives:108/252(42%), Gaps:47/252(18%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKE--HYETLEFLGDALVNFFIVDLLVQYSPN 61 LE LE +L Y F K LL +A H SY++ Y+ LEFLGDA++++ + P Sbjct 1292 LETLENQLDYKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPK 1351 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI----------------- 104 + G L+ L++ ++ E +A L +F+ + ++E I Sbjct 1352 LKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQS 1411 Query 105 --------IGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDI--LSAIKEGRVKKDYKT 154 +GD+ E+ A+++D G + N + F + + LS ++ +K+ Sbjct 1412 EGPRCPKVLGDLVESCLGALFLDCGFNLNHVWTMMLS-FLDPVKNLSNLQISPIKE---- 1466 Query 155 ILQEITQK-RWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTL----GEGKSKKEAEQRA 209 L E+ Q +W + F VE K+ + G++K+E ++A Sbjct 1467 -LIELCQSYKWDRE-------ISATKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKA 1518 Query 210 AEELIKLLEESE 221 A+ +I L+ E Sbjct 1519 AQLMITNLKAHE 1530 >RecName: Full=Endoribonuclease Dicer homolog 1; AltName: Full=Dicer-like protein 1; Short=AtDCL1; AltName: Full=Protein ABNORMAL SUSPENSOR 1; AltName: Full=Protein CARPEL FACTORY; AltName: Full=Protein SHORT INTEGUMENTS 1; AltName: Full=Protein SUSPENSOR 1 [Arabidopsis thaliana] Sequence ID: Q9SP32.2 Length: 1909 Range 1: 1562 to 1722 Score:60.5 bits(145), Expect:2e-09, Method:Composition-based stats., Identities:45/161(28%), Positives:76/161(47%), Gaps:31/161(19%) Query 7 LEKKLGYTFKDKSLLEKALTHVS--YSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE 64 LE+ L Y FK+K LL +A+TH S S Y+ LEF+GDA+++ I L + Sbjct 1562 LERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPP 1621 Query 65 GFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI-------------------- 104 G L+ L+A ++ E F +A K +LH ++R + + I Sbjct 1622 GRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFG 1681 Query 105 ---------IGDVFEALWAAVYIDSGRDANFTRELFYKLFK 136 +GD+ E++ A+++DSG+D ++F L + Sbjct 1682 LGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQ 1722 Range 2: 1340 to 1435 Score:38.1 bits(87), Expect:0.046, Method:Composition-based stats., Identities:28/97(29%), Positives:43/97(44%), Gaps:1/97(1%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M + QL+ + Y +LE ALT S + YE E LGDA + + + L P Sbjct 1340 MLLAVQLKNLISYPIPTSKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 1398 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR 97 K EG L+ ++ ++S A L +I+ R Sbjct 1399 QKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADR 1435 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease dcl1; Includes: RecName: Full=ATP-dependent helicase dcl1 [Aspergillus clavatus NRRL 1] Sequence ID: A1CBC9.2 Length: 1534 Range 1: 1252 to 1345 Score:60.5 bits(145), Expect:2e-09, Method:Composition-based stats., Identities:36/94(38%), Positives:54/94(57%), Gaps:5/94(5%) Query 6 QLEKKLGYTFKDKSLLEKALTHVS-----YSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 Q+E+KLGY F+ LL A+TH S Y + Y+ LEFLGD+L++ V+ L P Sbjct 1252 QVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVPCYQRLEFLGDSLLDMVCVEDLFHRFP 1311 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR 94 ++ +L+ K ++S +F LA KL HK I+ Sbjct 1312 DRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIK 1345 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease dcl2; Includes: RecName: Full=ATP-dependent helicase dcl2 [Aspergillus oryzae RIB40] Sequence ID: Q2UNX5.1 Length: 1377 Range 1: 1095 to 1374 Score:59.7 bits(143), Expect:3e-09, Method:Composition-based stats., Identities:65/283(23%), Positives:112/283(39%), Gaps:71/283(25%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYS---KKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L++ LGYTFK++ LL +ALTH S + Y+ LEFLGDA+++ IV ++ QYS Sbjct 1095 LQRHLGYTFKNEDLLIEALTHPSCQHDQTTQSYQRLEFLGDAILDMVIVPIIFQYSNKIS 1154 Query 64 EGFLSPLKAYLISEEFFNLL--------------------------AQKLELHKFIRIK- 96 G ++ +K +++ Q +EL +F+R Sbjct 1155 PGDMTLIKHAVVNANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNS 1214 Query 97 -----------------RGKI-------------------NETIIGDVFEALWAAVYIDS 120 R KI + D+ E++ A+Y+DS Sbjct 1215 LDLQTSRDAALDRHRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDS 1274 Query 121 GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHH 180 G D + ++ +LS ++ + T + I Q+ K + L V Sbjct 1275 GGDLSACERFLEQI---GLLSYVRRVLLDGINVTHPRNIAQRLSKGDALFNLRRVSDEKG 1331 Query 181 KKKFIVEAKIKEYR-TLGEG-KSKKEAEQRAAEELIKLLEESE 221 + + + + + L EG + +EAE RAA E I+ L+ + Sbjct 1332 RSMYRCTVTMNDAQIVLVEGCQCGEEAEVRAANETIEFLQRRQ 1374 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease dcl1; Includes: RecName: Full=ATP-dependent helicase dcl1 [Aspergillus niger CBS 513.88] Sequence ID: A2RAF3.2 Length: 1525 Range 1: 1245 to 1337 Score:59.3 bits(142), Expect:5e-09, Method:Composition-based stats., Identities:34/93(37%), Positives:54/93(58%), Gaps:4/93(4%) Query 6 QLEKKLGYTFKDKSLLEKALTHVSY----SKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 ++E+KL Y F+ +LL A TH SY +K Y+ LEFLGD+L++ V+ L P+ Sbjct 1245 KIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDMVCVEDLFARFPD 1304 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIR 94 + +L+ K ++S +F LA KL LH ++ Sbjct 1305 RDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLK 1337 >RecName: Full=Endoribonuclease Dicer homolog 3; AltName: Full=Dicer-like protein 3; Short=AtDCL3 [Arabidopsis thaliana] Sequence ID: Q9LXW7.2 Length: 1580 Range 1: 1198 to 1354 Score:57.0 bits(136), Expect:2e-08, Method:Compositional matrix adjust., Identities:43/157(27%), Positives:75/157(47%), Gaps:25/157(15%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 L +LE+K+ + F K LL++A+TH S + YE LEFLGD++++F I L Sbjct 1198 LIELERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYEQTG 1257 Query 64 EGFLSPLKAYLISEEFFNLLAQKLELHKFIR----IKRGKINETI--------------- 104 G ++ L++ ++ E F +A K LH ++ + +IN+ + Sbjct 1258 PGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPS 1317 Query 105 ------IGDVFEALWAAVYIDSGRDANFTRELFYKLF 135 +GDV E++ A+ ID+ D + +F L Sbjct 1318 IQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEPLL 1354 >RecName: Full=Endoribonuclease Dicer homolog 2b; AltName: Full=Dicer-like protein 2b; Short=OsDCL2b [Oryza sativa Japonica Group] Sequence ID: Q69LX2.2 Length: 1377 Range 1: 1132 to 1314 Score:56.6 bits(135), Expect:3e-08, Method:Compositional matrix adjust., Identities:47/187(25%), Positives:79/187(42%), Gaps:31/187(16%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 + LE LGY F D LL +ALTH SY Y+ LEFLGDA+++ + P Sbjct 1132 VRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYP 1191 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKIN------------------- 101 + L+ L++ ++ + A K L+K I +++ Sbjct 1192 DCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGPSYGWE 1251 Query 102 -----ETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTIL 156 ++GDV E++ A+Y+DS D +E+ ++ K + ++ D L Sbjct 1252 AGIGLPKVLGDVIESIAGAIYLDSKCD----KEVVWRSMKRLLEPLATPETIEPDPVKGL 1307 Query 157 QEITQKR 163 QE +R Sbjct 1308 QEFCDRR 1314 >RecName: Full=Endoribonuclease Dicer homolog 3b; AltName: Full=Dicer-like protein 3b; Short=OsDCL3b [Oryza sativa Japonica Group] Sequence ID: Q7XD96.2 Length: 1637 Range 1: 1241 to 1403 Score:56.2 bits(134), Expect:5e-08, Method:Composition-based stats., Identities:43/163(26%), Positives:73/163(44%), Gaps:31/163(19%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSK---KEHYETLEFLGDALVNFFIVDLLVQYSP 60 +E+LE KL Y F K LL +A+TH S + Y+ LEFLGD++++ + L Sbjct 1241 IEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHT 1300 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---------------- 104 + G L+ L++ L+S E F + +H ++ G + E I Sbjct 1301 DVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYVRSNLECQGKESE 1360 Query 105 ------------IGDVFEALWAAVYIDSGRDANFTRELFYKLF 135 +GD+ E++ AV+ID+ + + E+F L Sbjct 1361 FLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLL 1403 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease DCL1; Includes: RecName: Full=ATP-dependent helicase DCL1 [Chaetomium globosum CBS 148.51] Sequence ID: Q2H0G2.2 Length: 1607 Range 1: 1269 to 1390 Score:55.5 bits(132), Expect:8e-08, Method:Composition-based stats., Identities:37/122(30%), Positives:58/122(47%), Gaps:7/122(5%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSY----SKKEHYETLEFLGDALVNFFIVDLLV 56 + M + E ++GY F LL A H +Y K Y+ LEFLGDAL++ V+ L Sbjct 1269 LDMAARFEARMGYAFTHPRLLRSAFQHPTYPSVYEKLPSYQRLEFLGDALLDMASVEFLF 1328 Query 57 QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI---IGDVFEALW 113 P +L+ K ++S +F LA L H+ I I + I + ++ +AL Sbjct 1329 HRFPGADPQWLTEHKMAMVSNQFLGCLAVYLGFHRAISYCASAIQKEITEYVTEIEDALQ 1388 Query 114 AA 115 +A Sbjct 1389 SA 1390 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease dcl2; Includes: RecName: Full=ATP-dependent helicase dcl2 [Aspergillus fischeri NRRL 181] Sequence ID: A1D9Z6.1 Length: 1388 Range 1: 1097 to 1178 Score:55.5 bits(132), Expect:8e-08, Method:Composition-based stats., Identities:32/85(38%), Positives:54/85(63%), Gaps:6/85(7%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYS 59 M E+L+ +GYTF+D+SLL +ALTH S S + Y+ LE+LGDA+++ IV + + Sbjct 1097 MNERLKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHP 1156 Query 60 PNKREGFLSPLKAYLISEEFFNLLA 84 + +G ++ +K +++ NLLA Sbjct 1157 IQRPQGDMTKIKHAVVNA---NLLA 1178 Range 2: 909 to 1059 Score:41.2 bits(95), Expect:0.004, Method:Composition-based stats., Identities:42/159(26%), Positives:69/159(43%), Gaps:48/159(30%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH---------------YETLEFLGDALV 47 ++E+LE +L T L E L V + +H Y+ EFLGD+++ Sbjct 909 IVERLETELIAT----RLRETILRDVGFKSTDHIITAISTPFAHALTNYQRYEFLGDSIL 964 Query 48 NFFIVDLLVQYSPNKREGFLSP-------------------LKAYLISEEFFN------L 82 F + L PN EG+LS L AY++++ + L Sbjct 965 KFSVSCQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAALDTGLDAYIVTKRIASRKWSAPL 1024 Query 83 LAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSG 121 +++KLE + KR +++ ++ DV EAL A Y+D G Sbjct 1025 ISEKLER---VPAKR-QMSTKVLADVVEALIGAAYMDGG 1059 >RecName: Full=Endoribonuclease Dicer homolog 2a; AltName: Full=Dicer-like protein 2a; Short=OsDCL2a [Oryza sativa Japonica Group] Sequence ID: Q10HL3.1 Length: 1410 Range 1: 1161 to 1346 Score:55.5 bits(132), Expect:9e-08, Method:Compositional matrix adjust., Identities:47/190(25%), Positives:79/190(41%), Gaps:34/190(17%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 + LE LGY F D LL +ALTH SY Y+ LEFLGDA+++ + P Sbjct 1161 VRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYP 1220 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKIN------------------- 101 + L+ L++ ++ + A K L+K I +++ Sbjct 1221 DCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSY 1280 Query 102 --------ETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYK 153 ++GDV E++ A+Y+DS D +E+ ++ K + ++ D Sbjct 1281 GWEAGIGLPKVLGDVIESIAGAIYLDSKCD----KEVVWRSMKRLLEPLATPETIEPDPV 1336 Query 154 TILQEITQKR 163 LQE +R Sbjct 1337 KGLQEFCDRR 1346 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease DCL2; Includes: RecName: Full=ATP-dependent helicase DCL2 [Parastagonospora nodorum SN15] Sequence ID: Q0UL22.2 Length: 1399 Range 1: 1094 to 1173 Score:55.1 bits(131), Expect:1e-07, Method:Composition-based stats., Identities:31/80(39%), Positives:45/80(56%), Gaps:3/80(3%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKE---HYETLEFLGDALVNFFIVDLLVQYSP 60 L+ LE +GYTFK K LL +ALTH S+S YE LEFLGDA++++ I L +SP Sbjct 1094 LDVLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSP 1153 Query 61 NKREGFLSPLKAYLISEEFF 80 + ++ ++ F Sbjct 1154 ELSHQKMHAIRTATVNASFL 1173 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease dcl-1; Includes: RecName: Full=ATP-dependent helicase dcl-1 [Neurospora crassa OR74A] Sequence ID: Q7S8J7.1 Length: 1584 Range 1: 1257 to 1364 Score:55.1 bits(131), Expect:1e-07, Method:Compositional matrix adjust., Identities:34/112(30%), Positives:56/112(50%), Gaps:8/112(7%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYS----KKEHYETLEFLGDALVNFFIVDLLVQY 58 M ++ +++GY FK LL A H +Y + Y+ LEFLGDAL + VD L + Sbjct 1257 MAKKFSERMGYKFKHPRLLRAAFQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRK 1316 Query 59 SPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIGDVFE 110 P +L+ K ++S +F L+ L +K I ++ +I+ D+ E Sbjct 1317 FPAADPQWLTEHKMAMVSNQFLCCLSFHLGFNKCI----ATMSPSILKDIAE 1364 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease dcl2; Includes: RecName: Full=ATP-dependent helicase dcl2 [Aspergillus fumigatus Af293] Sequence ID: Q4WA22.2 Length: 1388 Range 1: 1097 to 1186 Score:54.3 bits(129), Expect:2e-07, Method:Composition-based stats., Identities:28/90(31%), Positives:53/90(58%), Gaps:3/90(3%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYS 59 M ++L+ +GYTF+D+SLL +ALTH S S + Y+ LE+LGDA+++ IV + + Sbjct 1097 MNDRLKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHR 1156 Query 60 PNKREGFLSPLKAYLISEEFFNLLAQKLEL 89 + +G ++ +K +++ L + + Sbjct 1157 IQRPQGDMTKIKHAVVNANLLAFLCMEFAI 1186 Range 2: 909 to 1059 Score:40.4 bits(93), Expect:0.008, Method:Composition-based stats., Identities:42/159(26%), Positives:69/159(43%), Gaps:48/159(30%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH---------------YETLEFLGDALV 47 ++EQLE +L T L + L VS+ +H Y+ EFLGD+++ Sbjct 909 IVEQLEIELIAT----RLRDTILRDVSFKSTDHIITAISTPLAHRLTNYQRYEFLGDSIL 964 Query 48 NFFIVDLLVQYSPNKREGFLSP-------------------LKAYLISEEFFN------L 82 F + L PN EG+LS L AY++++ + L Sbjct 965 KFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPL 1024 Query 83 LAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSG 121 +++KL + KR +++ ++ DV EAL A Y+D G Sbjct 1025 ISEKLGR---VPAKR-QMSTKVLADVVEALIGAAYVDGG 1059 >RecName: Full=Ribonuclease 3-like protein 1; AltName: Full=Ribonuclease III-like protein 1; Short=RNase III-like protein 1 [Oryza sativa Japonica Group] Sequence ID: Q5JK90.1 Length: 256 Range 1: 23 to 218 Score:53.1 bits(126), Expect:3e-07, Method:Compositional matrix adjust., Identities:57/219(26%), Positives:93/219(42%), Gaps:53/219(24%) Query 6 QLEKKLG-YTFKDKS--LLEKALTHVSYSKKE-----HYETLEFLGDALVNFFIVDLLVQ 57 ++E+ LG Y+F+D LLE ALTH + + E ++ LEFLGDA + + + Sbjct 23 EVERALGGYSFRDGGALLLEDALTHSVHPRDEAGGRARHQRLEFLGDAALGLAFATIFYR 82 Query 58 YSPNKREGFLSPLKAYLISEE----------------FFNLLAQKLELHKFIRIKRGKIN 101 P +G L+ L++ +S + +N Q E+ +F + G + Sbjct 83 DDPGLDQGDLTVLRSANVSTQKLARVAVRRRLYPLLRRYNCAPQDHEVSRFTKSVEGPYS 142 Query 102 ------ETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTI 155 ++ D+ EA+ AVY+DS D +++ KL E I Sbjct 143 GDPIEGPRVLADIVEAIVGAVYLDSKLDLEVLQKV-AKLLCEPI---------------- 185 Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYR 194 IT+K E PE L + G H + +E KI +R Sbjct 186 ---ITKKALLEDPESMLNELGGEHRED---LEIKILAWR 218 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease dcl1; Includes: RecName: Full=ATP-dependent helicase dcl1 [Aspergillus fischeri NRRL 181] Sequence ID: A1DE13.1 Length: 1538 Range 1: 1253 to 1408 Score:53.9 bits(128), Expect:3e-07, Method:Compositional matrix adjust., Identities:40/156(26%), Positives:69/156(44%), Gaps:35/156(22%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYS-----KKEHYETLEFLGDALVNFFIVDLLVQ 57 + +E++LGY F LL A+TH S + Y+ LEFLGD+L++ V+ L + Sbjct 1253 LARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFR 1312 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI---------------------- 95 P++ +L+ K ++S +F L+ KL H+ I Sbjct 1313 RFPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEIESAQAE 1372 Query 96 KRGKINETIIG--------DVFEALWAAVYIDSGRD 123 RG ++ ++ D+ EA A+++DS D Sbjct 1373 SRGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFD 1408 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease dcl2; Includes: RecName: Full=ATP-dependent helicase dcl2 [Aspergillus clavatus NRRL 1] Sequence ID: A1C9M6.1 Length: 1389 Range 1: 1100 to 1247 Score:53.1 bits(126), Expect:5e-07, Method:Composition-based stats., Identities:37/155(24%), Positives:79/155(50%), Gaps:22/155(14%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 ++L++ + YTF+++SLL +ALTH S + + Y+ LEFLGDA+++ IV + + Sbjct 1100 DRLKRHISYTFENESLLVEALTHPSCDYDASTQSYQRLEFLGDAVLDMIIVSAIFNHPVQ 1159 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKIN-------ETIIGDVFEALW- 113 +G ++ +K L++ L + + + +R + E I + LW Sbjct 1160 MPQGHMTKIKHALVNANLLAFLCMEFAIPE----ERASVEQISTLQFEVISNEELVELWR 1215 Query 114 ----AAVYIDSGRDANFTRELFYKLFKEDILSAIK 144 + +++ RDA+ R ++ +++IL +++ Sbjct 1216 FMRYRGLDLNNARDASLAR---HRALRDEILHSLQ 1247 Range 2: 922 to 1063 Score:42.4 bits(98), Expect:0.002, Method:Composition-based stats., Identities:38/149(26%), Positives:69/149(46%), Gaps:33/149(22%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 K+ E + + +G+T + A++ S +Y+ EFLGD+++ F + L PN Sbjct 922 KLYETILRDVGFTSTQHII--TAISAPSAQALTNYQRYEFLGDSILKFSVSCQLFFKHPN 979 Query 62 KREGFLSP-------------------LKAYLISEEFF------NLLAQKLELHKFIRIK 96 EG+LS L A++I++ F L++++LE R+ Sbjct 980 WHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPRKWSAPLISERLE-----RVA 1034 Query 97 -RGKINETIIGDVFEALWAAVYIDSGRDA 124 + +++ ++ DV EAL A Y+D G A Sbjct 1035 GKRQVSSKVLADVVEALIGAAYMDGGHAA 1063 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease dcl-2; Includes: RecName: Full=ATP-dependent helicase dcl-2 [Neurospora crassa OR74A] Sequence ID: Q7SCC1.4 Length: 1534 Range 1: 1151 to 1216 Score:53.1 bits(126), Expect:5e-07, Method:Composition-based stats., Identities:30/66(45%), Positives:42/66(63%), Gaps:5/66(7%) Query 2 KMLEQLEKKLGYTFKDKSLLEKALTHVSY----SKKEHYETLEFLGDALVNFFIVD-LLV 56 K LE LEK + YTF KSLL +A+TH S + + YE LEFLGDA+++ +V L+ Sbjct 1151 KQLEPLEKAMDYTFNKKSLLIEAMTHPSCAGLGTNESCYERLEFLGDAILDVIVVKRLMA 1210 Query 57 QYSPNK 62 + PN+ Sbjct 1211 ETGPNE 1216 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Treponema succinifaciens DSM 2489] Sequence ID: F2NV13.1 Length: 369 Range 1: 9 to 147 Score:52.4 bits(124), Expect:6e-07, Method:Compositional matrix adjust., Identities:42/143(29%), Positives:72/143(50%), Gaps:25/143(17%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK----EHYETLEFLGDALVNFFIVDLLV------ 56 ++ + Y FK+ LLE+A T SYS++ ++ E LEF GD +++FF+ ++ Sbjct 9 VQSSINYQFKNLQLLEQAFTRKSYSEEHPELQNNEVLEFYGDEILDFFVTKMMYKRFSRI 68 Query 57 ---QYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE--------TII 105 + K EG L+ LK+ L+S+E + KF+ + GK +E ++ Sbjct 69 LNNELVSEKNEGELTKLKSILVSKESLARCMYNIGFSKFLYL--GKSDEKNEVYKSKSVN 126 Query 106 GDVFEALWAAVYIDSGRDANFTR 128 D+FEA+ AV D D N+ + Sbjct 127 EDLFEAIIGAVAADC--DWNYEK 147 >RecName: Full=Ribonuclease 3-like protein 3; AltName: Full=Ribonuclease III-like protein 3; Short=RNase III-like protein 3; AltName: Full=Ribonuclease three-like protein 3 [Arabidopsis thaliana] Sequence ID: Q9FKF0.1 Length: 957 Range 1: 1 to 156 Score:52.8 bits(125), Expect:7e-07, Method:Compositional matrix adjust., Identities:40/160(25%), Positives:68/160(42%), Gaps:29/160(18%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP 60 M +E +EK L Y+F +K+LL++A+T K ++ LEF GD+++ + + P Sbjct 1 MNSVEAVEKILNYSFVNKTLLKEAITQ----KSPLFDRLEFFGDSILEVAFTNYICHTYP 56 Query 61 NKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI-------------------- 100 N + L L+ +S E F +A LH F+ ++ + Sbjct 57 NLKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPY 116 Query 101 -----NETIIGDVFEALWAAVYIDSGRDANFTRELFYKLF 135 I+ D E++ A V+ID D E+F L Sbjct 117 GGLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLL 156 >RecName: Full=Endoribonuclease Dicer homolog 1; AltName: Full=Dicer-like protein 1; Short=OsDCL1 [Oryza sativa Japonica Group] Sequence ID: Q8LMR2.1 Length: 1883 Range 1: 1538 to 1777 Score:52.8 bits(125), Expect:7e-07, Method:Composition-based stats., Identities:60/249(24%), Positives:106/249(42%), Gaps:40/249(16%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY--SKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 + L+ LG F++K LL +A+TH S S Y+ LEF+GDA+++ I L + Sbjct 1538 FDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTD 1597 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI----------------- 104 G L+ L+A ++ E F +A K +LH +R + I Sbjct 1598 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFN 1657 Query 105 ------------IGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDY 152 +GD+ E++ A+++DSG D + ++F L + ++ Sbjct 1658 SFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVRE- 1716 Query 153 KTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEE 212 LQE Q++ E EY+ + F+ +I + + KK A++ AA Sbjct 1717 ---LQERCQQQ-AEGLEYKASRAGNIATVEVFVDGVQIG----VAQNPQKKMAQKLAARN 1768 Query 213 LIKLLEESE 221 + +L+E E Sbjct 1769 ALVVLKEKE 1777 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease dcl1; Includes: RecName: Full=ATP-dependent helicase dcl1 [Aspergillus fumigatus Af293] Sequence ID: Q4WVE3.3 Length: 1537 Range 1: 1252 to 1347 Score:52.4 bits(124), Expect:9e-07, Method:Composition-based stats., Identities:32/96(33%), Positives:52/96(54%), Gaps:5/96(5%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYS-----KKEHYETLEFLGDALVNFFIVDLLVQ 57 + +E++LGY F LL A+TH S + Y+ LEFLGD+L++ V+ L + Sbjct 1252 LARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFR 1311 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI 93 P++ +LS K ++S +F L+ KL H+ I Sbjct 1312 RFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRI 1347 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease DCL2; Includes: RecName: Full=ATP-dependent helicase DCL2 [Pyricularia oryzae 70-15] Sequence ID: A4RHU9.3 Length: 1485 Range 1: 1168 to 1256 Score:51.2 bits(121), Expect:2e-06, Method:Composition-based stats., Identities:34/89(38%), Positives:50/89(56%), Gaps:6/89(6%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSY----SKKEHYETLEFLGDALVNFFIVDLLVQYS 59 L LE+ LGY+F KSLL +A+TH SY S E LEFLGD++++F +V L Sbjct 1168 LGPLEELLGYSFNKKSLLIEAITHASYNIPGSAGSSLERLEFLGDSVLDFVVVARLFSVK 1227 Query 60 -PNKREGF-LSPLKAYLISEEFFNLLAQK 86 P E + + L+ +++ EF LA + Sbjct 1228 DPAPIEHYNMHLLRTAVVNGEFLGFLAME 1256 Range 2: 1002 to 1127 Score:45.4 bits(106), Expect:2e-04, Method:Composition-based stats., Identities:37/126(29%), Positives:55/126(43%), Gaps:19/126(15%) Query 15 FKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYL 74 FKD L+ +T S + +YE +EFLGDA++ + + EG+LS LK L Sbjct 1002 FKDIDLVMMVITSSSAGRLTNYERVEFLGDAVLKLGAAVTCATNNLHFPEGYLSLLKDRL 1061 Query 75 ISEEFFNLLAQKLELHKFIRIKR-------------------GKINETIIGDVFEALWAA 115 +S A L L +FI ++ K++ + DV EAL A Sbjct 1062 VSNSRLCKAATALGLDQFIITRQYSLKQWRNMLTAPEPPTNTRKMSSKTLADVTEALIGA 1121 Query 116 VYIDSG 121 YI+ G Sbjct 1122 AYIEGG 1127 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease dcl2; Includes: RecName: Full=ATP-dependent helicase dcl2 [Aspergillus terreus NIH2624] Sequence ID: Q0CEI2.2 Length: 1377 Range 1: 1089 to 1170 Score:49.7 bits(117), Expect:7e-06, Method:Composition-based stats., Identities:30/85(35%), Positives:52/85(61%), Gaps:6/85(7%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYS 59 M + L++ LGYTF +++LL +ALTH S + + Y+ LEFLGDA+++ +V + ++ Sbjct 1089 MNDSLKQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVHAMAHHA 1148 Query 60 PNKREGFLSPLKAYLISEEFFNLLA 84 +G ++ +K L + NLLA Sbjct 1149 VECPQGEMTMIKHALTNA---NLLA 1170 Range 2: 906 to 1057 Score:40.0 bits(92), Expect:0.013, Method:Composition-based stats., Identities:39/156(25%), Positives:61/156(39%), Gaps:40/156(25%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH---------------YETLEFLGDALV 47 +L++LE L T L E L V +S H Y+ EF GD+++ Sbjct 906 ILDRLEATLIAT----RLCETILQDVQFSSTRHVITAISAPTAQSPTDYQRYEFFGDSVL 961 Query 48 NFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR---------- 97 F + L PN EG+LS + ++ A + L FI +R Sbjct 962 KFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVGLDAFILTRRFTPRKWTAPL 1021 Query 98 ---------GK--INETIIGDVFEALWAAVYIDSGR 122 GK ++ ++ DV E+L A Y+D G+ Sbjct 1022 ISEKAVEVAGKRPLSSKVLADVVESLIGAAYMDGGQ 1057 >RecName: Full=Dicer-like protein 1; Includes: RecName: Full=Endoribonuclease DCL1; Includes: RecName: Full=ATP-dependent helicase DCL1 [Parastagonospora nodorum SN15] Sequence ID: Q0UI93.2 Length: 1522 Range 1: 1219 to 1383 Score:49.7 bits(117), Expect:7e-06, Method:Composition-based stats., Identities:42/166(25%), Positives:71/166(42%), Gaps:36/166(21%) Query 1 MKMLEQLEKKLGYTFKDKSLLEKALTHVS----YSKKEHYETLEFLGDALVNF-FIVDLL 55 + + ++E K Y F+ LL A H S + Y+ LEFLGD+L++ FI+ L Sbjct 1219 LDLAHKIEMKHPYRFRYPRLLRSAFIHPSQPFMWENIPSYQRLEFLGDSLLDMAFIMHLF 1278 Query 56 VQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI----------- 104 +Y P+K +L+ K ++S +F + KL H ++ ++ I Sbjct 1279 YKY-PDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHTHMKQNTAILSSQIRDYVYEVEEAE 1337 Query 105 -------------------IGDVFEALWAAVYIDSGRDANFTRELF 131 + DV EA AA+++DS D N ++ F Sbjct 1338 REANGAVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDFNVVQKFF 1383 >RecName: Full=Dicer-like protein 2-1; Includes: RecName: Full=Endoribonuclease dcl2-1; Includes: RecName: Full=ATP-dependent helicase dcl2-1 [Aspergillus niger CBS 513.88] Sequence ID: A2R345.2 Length: 1387 Range 1: 1095 to 1197 Score:49.7 bits(117), Expect:8e-06, Method:Composition-based stats., Identities:31/107(29%), Positives:55/107(51%), Gaps:7/107(6%) Query 5 EQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYETLEFLGDALVNFFIVDLLVQYSPN 61 + L +GYTF +KSLL ++LTH S + + Y+ LEFLGDA+++ I+ L+ + Sbjct 1095 DHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPRE 1154 Query 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETIIGDV 108 +G ++ +K +++ + L + KR + T G V Sbjct 1155 IPQGLMTKIKHAVVNANLLAFFCMEFALTE----KRTNVQVTPTGTV 1197 Range 2: 937 to 1055 Score:38.5 bits(88), Expect:0.032, Method:Composition-based stats., Identities:33/123(27%), Positives:55/123(44%), Gaps:29/123(23%) Query 24 ALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSP-------------- 69 A+T S +Y+ EF GD+++ F + L PN EG+LS Sbjct 937 AITAPSAQSLTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGRDEIVQNSRLARA 996 Query 70 -----LKAYLISEEFF------NLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYI 118 L A+++++ F L+++K+ L K+ ++ ++ DV EAL A YI Sbjct 997 ALDAGLDAFIMNKMFTPRKWSAPLISEKISLTP----KQRTMSTKVLADVVEALIGASYI 1052 Query 119 DSG 121 D G Sbjct 1053 DGG 1055 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease DCL2; Includes: RecName: Full=ATP-dependent helicase DCL2 [Coccidioides immitis RS] Sequence ID: Q1DW80.3 Length: 1435 Range 1: 1140 to 1221 Score:48.1 bits(113), Expect:2e-05, Method:Composition-based stats., Identities:30/83(36%), Positives:48/83(57%), Gaps:3/83(3%) Query 3 MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH-YETLEFLGDALVNFFIVDLLVQYSPN 61 ML ++E +GYTFK K LL A+TH S H Y+ LEF+GD++++ +V L + SP Sbjct 1140 MLSEIEGLVGYTFKKKPLLLAAVTHPSSKGSGHSYQRLEFVGDSILDIIVVQELFE-SPR 1198 Query 62 KREGF-LSPLKAYLISEEFFNLL 83 F + ++ L++ +F L Sbjct 1199 CFHHFDMHLMRTALVNADFLAFL 1221 Range 2: 969 to 1101 Score:39.7 bits(91), Expect:0.016, Method:Composition-based stats., Identities:36/133(27%), Positives:55/133(41%), Gaps:24/133(18%) Query 15 FKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYL 74 F + SL+ A++ + + +Y+ LEFLGD+L+ L P EG L+ K + Sbjct 969 FSNLSLVLTAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNI 1028 Query 75 ISEEFFNLLAQKLELHKFI-----------------RIKRGKINE-------TIIGDVFE 110 +S + A + L KFI I G + E ++ DV E Sbjct 1029 VSNGYLANAALQTGLDKFILTKPFTGAKWRPSYNTDHINTGDMTEPTREMSTKVLADVVE 1088 Query 111 ALWAAVYIDSGRD 123 AL A ID G + Sbjct 1089 ALIGAANIDGGEN 1101 >RecName: Full=Putative ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Frog virus 3 (isolate Goorha)] Sequence ID: Q6GZP5.1 Length: 371 Range 1: 25 to 133 Score:47.8 bits(112), Expect:2e-05, Method:Compositional matrix adjust., Identities:33/109(30%), Positives:55/109(50%), Gaps:8/109(7%) Query 18 KSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSP--NKREGF--LSPLKAY 73 + L K T S + ++YE LE +GD + ++F ++ P N +G ++ LK Y Sbjct 25 RDLWNKVFTPKSVNPDDNYEALEIVGDGVASYFFPSYFLKRFPQLNSPKGVKTVARLKIY 84 Query 74 LISEEFFNLLAQKLELHKFIRIKRGKIN----ETIIGDVFEALWAAVYI 118 S++ F+ +A L KFIR +N E+++ D FEA AV + Sbjct 85 YGSKKSFSSIADSLGFWKFIRSGPVPVNPSTRESLLEDTFEAFLGAVCM 133 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Roseburia hominis A2-183] Sequence ID: G2SYN4.1 Length: 357 Range 1: 9 to 258 Score:46.2 bits(108), Expect:7e-05, Method:Compositional matrix adjust., Identities:58/253(23%), Positives:98/253(38%), Gaps:52/253(20%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYSKK---EHYETLEFLGDALVNFFIVDLLVQ----YS 59 ++ ++GYTFK++ LL +A T SYS + + E LEF+GD ++F +V L + YS Sbjct 9 IQDQIGYTFKNQELLVQAFTRRSYSMENGGQDNEVLEFIGDKALDFVVVKQLSEEFGHYS 68 Query 60 -------------------PNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI 100 + EG L+ +K L+ + L + ++ + +G + Sbjct 69 KKYQNWEKWGKTEETGTFISDLDEGELTEIKKQLVQKNTLADAIDNLGIAYYLIMGKGDV 128 Query 101 NETIIG------DVFEALWAAVYIDSGRD-------ANFTRELFYKLFKEDI-------- 139 + I D+FEA+ A+ +DS D N +F ED+ Sbjct 129 EKNIQDSLSVKEDLFEAILGAIALDSNWDIEALQDSMNVMLNPGELMFDEDVNYVAEIQA 188 Query 140 LSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIK--EYRTLG 197 S+ G + Q W P + + F E I +Y +G Sbjct 189 WSSANSGNIP--LHCFYPTSMQGTWY-MPRHHMCIYGKAEQDTHFACEVLIPGIDYHFVG 245 Query 198 EGKSKKEAEQRAA 210 G+SK A A+ Sbjct 246 YGRSKNLARMDAS 258 >RecName: Full=RISC-loading complex subunit tarbp2 [Tetraodon nigroviridis] Sequence ID: Q4SS66.1 Length: 345 Range 1: 145 to 208 Score:45.8 bits(107), Expect:9e-05, Method:Compositional matrix adjust., Identities:22/65(34%), Positives:40/65(61%), Gaps:2/65(3%) Query 156 LQE-ITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE + QK W+ PEY + GP H+K+F + +++ + +G G SKK A++ AA +++ Sbjct 145 LQELVVQKGWR-LPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKML 203 Query 215 KLLEE 219 + + Sbjct 204 SRIHD 208 >RecName: Full=Interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog B; AltName: Full=Double-stranded RNA-binding protein A; AltName: Full=XlRBPA [Xenopus laevis] Sequence ID: Q91836.1 Length: 298 Range 1: 117 to 175 Score:45.4 bits(106), Expect:1e-04, Method:Compositional matrix adjust., Identities:23/60(38%), Positives:38/60(63%), Gaps:2/60(3%) Query 156 LQEIT-QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE+ QK W+ PEY + GP HK++F + +++ + G G SK+ A++ AAE+L+ Sbjct 117 LQELAVQKGWR-LPEYTVAQESGPPHKREFTITCRVETFVETGSGTSKQVAKRVAAEKLL 175 >RecName: Full=Interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog A [Xenopus laevis] Sequence ID: Q7ZYA5.1 Length: 309 Range 1: 128 to 186 Score:45.4 bits(106), Expect:1e-04, Method:Compositional matrix adjust., Identities:23/60(38%), Positives:38/60(63%), Gaps:2/60(3%) Query 156 LQEIT-QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE+ QK W+ PEY + GP HK++F + +++ + G G SK+ A++ AAE+L+ Sbjct 128 LQELAVQKGWR-LPEYTVAQESGPPHKREFTITCRVETFVETGSGTSKQVAKRVAAEKLL 186 Range 2: 47 to 96 Score:39.3 bits(90), Expect:0.015, Method:Compositional matrix adjust., Identities:21/50(42%), Positives:27/50(54%), Gaps:0/50(0%) Query 168 PEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 P Y L EG H F I + +LGEG SKK A+Q+AAE + +L Sbjct 47 PVYTLEKAEGQAHNPSFTFRLVIGDITSLGEGPSKKTAKQKAAEFALNIL 96 >RecName: Full=RISC-loading complex subunit tarbp2 [Danio rerio] Sequence ID: Q7SXR1.1 Length: 346 Range 1: 144 to 207 Score:45.4 bits(106), Expect:1e-04, Method:Compositional matrix adjust., Identities:22/65(34%), Positives:40/65(61%), Gaps:2/65(3%) Query 156 LQE-ITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE + QK W+ PEY + GP H+K+F + +++ + +G G SKK A++ AA +++ Sbjct 144 LQELVVQKGWR-LPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKML 202 Query 215 KLLEE 219 + + Sbjct 203 SRIHD 207 >RecName: Full=Interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog [Danio rerio] Sequence ID: B0V3F8.2 Length: 282 Range 1: 103 to 166 Score:45.1 bits(105), Expect:1e-04, Method:Compositional matrix adjust., Identities:24/64(38%), Positives:35/64(54%), Gaps:0/64(0%) Query 155 ILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 ILQE+ +R PEY + GP H K+F + +++ G G SKK A + AAE +I Sbjct 103 ILQELAMQRVWCLPEYVVFMETGPGHMKEFTIACRLEGLEETGSGSSKKLARRAAAENMI 162 Query 215 KLLE 218 L+ Sbjct 163 AKLQ 166 >RecName: Full=RISC-loading complex subunit tarbp2 [Xenopus tropicalis] Sequence ID: Q5BJ52.2 Length: 351 Range 1: 155 to 213 Score:45.1 bits(105), Expect:2e-04, Method:Compositional matrix adjust., Identities:22/60(37%), Positives:38/60(63%), Gaps:2/60(3%) Query 156 LQE-ITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE + QK W+ PEY + GP H+K+F + +++ + +G G SKK A++ AA +++ Sbjct 155 LQELVVQKGWR-LPEYTVTQESGPAHRKEFTMTCRVERFLEIGSGTSKKLAKRNAAAKML 213 >RecName: Full=RISC-loading complex subunit TARBP2 [Rattus norvegicus] Sequence ID: Q3SWU0.1 Length: 365 Range 1: 163 to 221 Score:45.1 bits(105), Expect:2e-04, Method:Compositional matrix adjust., Identities:22/60(37%), Positives:38/60(63%), Gaps:2/60(3%) Query 156 LQE-ITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE + QK W+ PEY + GP H+K+F + +++ + +G G SKK A++ AA +++ Sbjct 163 LQELVVQKGWR-LPEYMVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKML 221 >RecName: Full=Dicer-like protein 2; Includes: RecName: Full=Endoribonuclease DCL-2; Includes: RecName: Full=ATP-dependent helicase DCL-2 [Cryphonectria parasitica] Sequence ID: Q2VF18.1 Length: 1451 Range 1: 1153 to 1235 Score:45.4 bits(106), Expect:2e-04, Method:Composition-based stats., Identities:26/83(31%), Positives:48/83(57%), Gaps:3/83(3%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEH---YETLEFLGDALVNFFIVDLLVQYSP 60 L+ LE+ + Y+F +K+LL +A+TH SY+ Y+ LEF+GDA++++ IV+ + P Sbjct 1153 LQLLEQLIEYSFCEKALLVEAVTHPSYNVSGTVACYDRLEFIGDAILDYIIVEEVFALEP 1212 Query 61 NKREGFLSPLKAYLISEEFFNLL 83 + L+ L++ + L Sbjct 1213 ALENWQMHLLRTALVNADILGFL 1235 >RecName: Full=RISC-loading complex subunit tarbp2 [Xenopus laevis] Sequence ID: Q6GPZ1.2 Length: 351 Range 1: 155 to 213 Score:45.1 bits(105), Expect:2e-04, Method:Compositional matrix adjust., Identities:22/60(37%), Positives:38/60(63%), Gaps:2/60(3%) Query 156 LQE-ITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE + QK W+ PEY + GP H+K+F + +++ + +G G SKK A++ AA +++ Sbjct 155 LQELVVQKGWR-LPEYTVTQESGPAHRKEFTMTCRVERFLEIGSGTSKKLAKRNAAAKML 213 >RecName: Full=RISC-loading complex subunit TARBP2; AltName: Full=TAR RNA-binding protein 2; AltName: Full=Trans-activation-responsive RNA-binding protein [Homo sapiens] Sequence ID: Q15633.3 Length: 366 Range 1: 164 to 222 Score:44.7 bits(104), Expect:2e-04, Method:Compositional matrix adjust., Identities:22/60(37%), Positives:38/60(63%), Gaps:2/60(3%) Query 156 LQE-ITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE + QK W+ PEY + GP H+K+F + +++ + +G G SKK A++ AA +++ Sbjct 164 LQELVVQKGWR-LPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKML 222 >RecName: Full=RISC-loading complex subunit TARBP2 [Bos taurus] Sequence ID: Q0IIG6.2 Length: 366 Range 1: 164 to 222 Score:44.7 bits(104), Expect:2e-04, Method:Compositional matrix adjust., Identities:22/60(37%), Positives:38/60(63%), Gaps:2/60(3%) Query 156 LQE-ITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE + QK W+ PEY + GP H+K+F + +++ + +G G SKK A++ AA +++ Sbjct 164 LQELVVQKGWR-LPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKML 222 >RecName: Full=RISC-loading complex subunit TARBP2; AltName: Full=Protamine-1 RNA-binding protein; Short=PRM-1 RNA-binding protein; AltName: Full=TAR RNA-binding protein 2 [Mus musculus] Sequence ID: P97473.2 Length: 365 Range 1: 163 to 221 Score:44.7 bits(104), Expect:3e-04, Method:Compositional matrix adjust., Identities:22/60(37%), Positives:38/60(63%), Gaps:2/60(3%) Query 156 LQE-ITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE + QK W+ PEY + GP H+K+F + +++ + +G G SKK A++ AA +++ Sbjct 163 LQELVVQKGWR-LPEYMVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKML 221 >RecName: Full=Double-strand-specific pac1 ribonuclease; AltName: Full=Protein hcs [Schizosaccharomyces pombe 972h-] Sequence ID: P22192.1 Length: 363 Range 1: 170 to 267 Score:44.3 bits(103), Expect:3e-04, Method:Compositional matrix adjust., Identities:28/98(29%), Positives:44/98(44%), Gaps:6/98(6%) Query 35 HYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR 94 H E LEFLGD+ N F ++ P EG LS L+A + E + A+ K + Sbjct 170 HNERLEFLGDSFFNLFTTRIIFSKFPQMDEGSLSKLRAKFVGNESADKFARLYGFDKTLV 229 Query 95 IKRG------KINETIIGDVFEALWAAVYIDSGRDANF 126 + + ++ +I D FEA A+ +D + F Sbjct 230 LSYSAEKDQLRKSQKVIADTFEAYLGALILDGQEETAF 267 >RecName: Full=DRBM domain-containing protein 340R [Invertebrate iridescent virus 6] Sequence ID: Q91FI4.1 Length: 173 Range 1: 12 to 100 Score:43.1 bits(100), Expect:3e-04, Method:Compositional matrix adjust., Identities:30/89(34%), Positives:46/89(51%), Gaps:7/89(7%) Query 136 KEDILSAIKEGRVKKD-YKTI--LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKE 192 KE+IL KE + + + +I L E K + P Y ++ GP H F +E +I + Sbjct 12 KEEILCTKKEQNIDMEKFNSIGFLNEFCHKNKYKPPSYTTLNQNGPDHSPTFNIECRIVD 71 Query 193 YRT----LGEGKSKKEAEQRAAEELIKLL 217 Y+ +G G S KEA++ AA + IK L Sbjct 72 YKPNGKFIGSGLSMKEAKKNAAFKTIKEL 100 >RecName: Full=Putative ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Invertebrate iridescent virus 6] Sequence ID: O55748.1 Length: 292 Range 1: 54 to 274 Score:43.5 bits(101), Expect:5e-04, Method:Compositional matrix adjust., Identities:57/223(26%), Positives:92/223(41%), Gaps:31/223(13%) Query 24 ALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKRE----GFLSPLKAYLISEEF 79 A T K +YE E LGD VN FIV+ + + P R ++ LK S+ Sbjct 54 AFTSRGADDKNNYEMFEQLGDVSVNKFIVNYMYKRFPQLRNPNGVDVVAKLKIKYASKNQ 113 Query 80 FNLLAQKLELHKFIRI---KRGKINETIIGDVFEALWAAV--YIDS-------------- 120 +L++ L++ +FI +R + ++ D FE+ + A IDS Sbjct 114 LQMLSESLDMWRFITATYDERTNKKKPLLEDTFESFFGATEWLIDSFIEDIALKQGNNNT 173 Query 121 --GRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT--QKRWKERPEYRLISVE 176 G N + LF +S E V D KT E+ QK +Y Sbjct 174 YVGVGYNIINGILTTLFDRINISLKYENLV--DAKTRFNEVIAEQKSIIGDVKYEDEYKN 231 Query 177 GPHHKK--KFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLL 217 G H K ++ + +KE +G G K++A+++AA ++ L Sbjct 232 GKHTSKIYRYPPNSNLKELLGIGTGTLKRDAQEQAASRALETL 274 >RecName: Full=Protein NUCLEAR FUSION DEFECTIVE 2; Flags: Precursor [Arabidopsis thaliana] Sequence ID: Q9FYL8.1 Length: 191 Range 1: 48 to 167 Score:42.7 bits(99), Expect:6e-04, Method:Compositional matrix adjust., Identities:35/126(28%), Positives:60/126(47%), Gaps:14/126(11%) Query 4 LEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALV------NFFIVDLLVQ 57 L +L+ ++GY F + +LL +A+TH S+S +E+ + L G ++ F D+ + Sbjct 48 LAKLQTQIGYKFNNINLLRRAMTHASFS-QENNKALSIFGTHIIETAVSLQFLAKDIDIS 106 Query 58 YSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRI--KRGKINETIIGDVFEALWAA 115 R +S + E L +L L K IR+ K N I+ F A++ A Sbjct 107 SKALGR--LISEVSNV---ESSCALDGDRLGLGKIIRVSTKTDASNSAILCTGFRAIFGA 161 Query 116 VYIDSG 121 + ID+G Sbjct 162 IAIDAG 167 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog [Aplysia californica] Sequence ID: Q3L1C9.1 Length: 950 Range 1: 695 to 756 Score:43.5 bits(101), Expect:8e-04, Method:Composition-based stats., Identities:21/62(34%), Positives:40/62(64%), Gaps:0/62(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 L +I Q + K+ P Y L++ G +++FIV+ ++++ G G +KK A++ AAE +++ Sbjct 695 LIQIMQAQKKKEPVYTLVTERGLPRRREFIVQVEVEDKTCPGSGPNKKLAKRAAAEAMLQ 754 Query 216 LL 217 LL Sbjct 755 LL 756 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2 [Xenopus tropicalis] Sequence ID: Q5M7M7.1 Length: 624 Range 1: 304 to 388 Score:42.0 bits(97), Expect:0.002, Method:Compositional matrix adjust., Identities:24/85(28%), Positives:48/85(56%), Gaps:0/85(0%) Query 130 LFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAK 189 ++ K ++I+ A E + + L +I Q + ++ PEY L+S G +++F+++ K Sbjct 304 IYIKRRPKNIIKASPEYGQGMNPISRLAQIQQAKKEKEPEYVLLSERGIQRRREFVMQVK 363 Query 190 IKEYRTLGEGKSKKEAEQRAAEELI 214 + E G G +KK A++ AAE ++ Sbjct 364 VGEETATGTGPNKKTAKRNAAEAML 388 >RecName: Full=Dicer-like protein 2-2; Includes: RecName: Full=Endoribonuclease dcl2-2; Includes: RecName: Full=ATP-dependent helicase dcl2-2 [Aspergillus niger CBS 513.88] Sequence ID: A2QX45.2 Length: 1362 Range 1: 1078 to 1158 Score:42.0 bits(97), Expect:0.003, Method:Composition-based stats., Identities:24/81(30%), Positives:43/81(53%), Gaps:3/81(3%) Query 7 LEKKLGYTFKDKSLLEKALTHVSYS---KKEHYETLEFLGDALVNFFIVDLLVQYSPNKR 63 +E+ LGYTF DKSL +++TH S + + Y L FLG +++ + +V L +++ Sbjct 1078 MEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMN 1137 Query 64 EGFLSPLKAYLISEEFFNLLA 84 + LK+ + F +A Sbjct 1138 PQRMQSLKSAFTNNTFLTFIA 1158 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog 1 [Homo sapiens] Sequence ID: O95793.2 Length: 577 Range 1: 291 to 352 Score:41.2 bits(95), Expect:0.004, Method:Compositional matrix adjust., Identities:19/62(31%), Positives:40/62(64%), Gaps:0/62(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 L +I Q + ++ PEY L++ G +++F+++ K+ + G G +KK A++ AAE +++ Sbjct 291 LAQIQQAKKEKEPEYTLLTERGLPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLE 350 Query 216 LL 217 +L Sbjct 351 IL 352 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2 [Danio rerio] Sequence ID: Q7ZW47.2 Length: 606 Range 1: 312 to 370 Score:40.4 bits(93), Expect:0.006, Method:Compositional matrix adjust., Identities:21/59(36%), Positives:37/59(62%), Gaps:0/59(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 L +I Q + ++ PEY L+S G +++FI++ K+ T G G +KK A++ AAE ++ Sbjct 312 LAQIQQAKKEKEPEYMLLSERGMPRRREFIMQVKVGTEVTTGTGPNKKVAKRNAAEAML 370 >RecName: Full=Interferon-inducible double-stranded RNA-dependent protein kinase activator A; AltName: Full=PKR-associated protein X; AltName: Full=PKR-associating protein X; AltName: Full=Protein activator of the interferon-induced protein kinase; AltName: Full=Protein kinase, interferon-inducible double-stranded RNA-dependent activator [Homo sapiens] Sequence ID: O75569.1 Length: 313 Range 1: 131 to 189 Score:40.0 bits(92), Expect:0.007, Method:Compositional matrix adjust., Identities:20/59(34%), Positives:34/59(57%), Gaps:0/59(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE+ PEY L GP HK+++ +++ + G+G SKK+A++ AAE+ + Sbjct 131 LQELAIHHGWRLPEYTLSQEGGPAHKREYTTICRLESFMETGKGASKKQAKRNAAEKFL 189 >RecName: Full=Interferon-inducible double-stranded RNA-dependent protein kinase activator A; AltName: Full=PKR-associated protein X; AltName: Full=PKR-associating protein X; Short=RAX; AltName: Full=Protein activator of the interferon-induced protein kinase; AltName: Full=Protein kinase, interferon-inducible double-stranded RNA-dependent activator [Mus musculus] Sequence ID: Q9WTX2.1 Length: 313 Range 1: 131 to 189 Score:40.0 bits(92), Expect:0.007, Method:Compositional matrix adjust., Identities:20/59(34%), Positives:34/59(57%), Gaps:0/59(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE+ PEY L GP HK+++ +++ + G+G SKK+A++ AAE+ + Sbjct 131 LQELAIHHGWRLPEYTLSQEGGPAHKREYTTICRLESFMETGKGASKKQAKRNAAEKFL 189 >RecName: Full=Interferon-inducible double-stranded RNA-dependent protein kinase activator A; AltName: Full=Protein activator of the interferon-induced protein kinase; AltName: Full=Protein kinase, interferon-inducible double-stranded RNA-dependent activator [Rattus norvegicus] Sequence ID: Q4V8C7.1 Length: 313 Range 1: 131 to 189 Score:40.0 bits(92), Expect:0.007, Method:Compositional matrix adjust., Identities:20/59(34%), Positives:34/59(57%), Gaps:0/59(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE+ PEY L GP HK+++ +++ + G+G SKK+A++ AAE+ + Sbjct 131 LQELAIHHGWRLPEYTLSQEGGPAHKREYTTICRLESFMETGKGASKKQAKRNAAEKFL 189 >RecName: Full=Interferon-inducible double-stranded RNA-dependent protein kinase activator A; AltName: Full=Protein activator of the interferon-induced protein kinase; AltName: Full=Protein kinase, interferon-inducible double-stranded RNA-dependent activator [Bos taurus] Sequence ID: Q2HJ92.1 Length: 313 Range 1: 131 to 189 Score:40.0 bits(92), Expect:0.008, Method:Compositional matrix adjust., Identities:20/59(34%), Positives:34/59(57%), Gaps:0/59(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELI 214 LQE+ PEY L GP HK+++ +++ + G+G SKK+A++ AAE+ + Sbjct 131 LQELAIHHGWRLPEYTLSQEGGPAHKREYTTICRLESFMETGKGASKKQAKRNAAEKFL 189 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog 1 [Ailuropoda melanoleuca] Sequence ID: D2GVP7.1 Length: 580 Range 1: 298 to 359 Score:40.4 bits(93), Expect:0.008, Method:Compositional matrix adjust., Identities:19/62(31%), Positives:40/62(64%), Gaps:0/62(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 L +I Q + ++ PEY L++ G +++F+++ K+ + G G +KK A++ AAE +++ Sbjct 298 LAQIQQAKKEKEPEYLLLTERGLPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLE 357 Query 216 LL 217 +L Sbjct 358 IL 359 >RecName: Full=Maternal effect protein staufen [Drosophila melanogaster] Sequence ID: P25159.2 Length: 1026 Range 1: 564 to 645 Score:40.4 bits(93), Expect:0.008, Method:Composition-based stats., Identities:27/84(32%), Positives:46/84(54%), Gaps:2/84(2%) Query 136 KEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRT 195 +E + ++ EG KK + + EI KR ++++ EGP H K FI + T Sbjct 564 EEALEDSMDEGD-KKSPISQVHEIGIKR-NMTVHFKVLREEGPAHMKNFITACIVGSIVT 621 Query 196 LGEGKSKKEAEQRAAEELIKLLEE 219 GEG KK +++RAAE+++ L++ Sbjct 622 EGEGNGKKVSKKRAAEKMLVELQK 645 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2; Short=r-staufen protein [Rattus norvegicus] Sequence ID: Q68SB1.1 Length: 571 Range 1: 286 to 370 Score:40.0 bits(92), Expect:0.010, Method:Compositional matrix adjust., Identities:25/85(29%), Positives:47/85(55%), Gaps:0/85(0%) Query 130 LFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAK 189 LF+K + I+ A E + + L +I Q R ++ P+Y L+S G +++F+++ K Sbjct 286 LFFKKRPKTIIKAGPEYGQGMNPISRLAQIQQARKEKEPDYVLLSERGMPRRREFVMQVK 345 Query 190 IKEYRTLGEGKSKKEAEQRAAEELI 214 + G G +KK A++ AAE ++ Sbjct 346 VGNEVATGTGPNKKIAKKNAAEAML 370 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog 1 [Mus musculus] Sequence ID: Q9Z108.1 Length: 487 Range 1: 201 to 262 Score:39.3 bits(90), Expect:0.018, Method:Compositional matrix adjust., Identities:19/62(31%), Positives:40/62(64%), Gaps:0/62(0%) Query 156 LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 L +I Q + ++ PEY L++ G +++F+++ K+ + G G +KK A++ AAE +++ Sbjct 201 LAQIQQAKKEKEPEYMLLTERGLPRRREFVMQVKVGHHTAEGVGTNKKVAKRNAAENMLE 260 Query 216 LL 217 +L Sbjct 261 IL 262 >RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III; Short=RNase III [Saccharomyces cerevisiae S288C] Sequence ID: Q02555.1 Length: 471 Range 1: 236 to 333 Score:38.9 bits(89), Expect:0.021, Method:Compositional matrix adjust., Identities:28/100(28%), Positives:46/100(46%), Gaps:13/100(13%) Query 35 HYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR 94 H E LEFLGD+++N + ++ P+ EG LS L+ L+S E + H+ ++ Sbjct 236 HNERLEFLGDSILNSVMTLIIYNKFPDYSEGQLSTLRMNLVSNEQIKQWSIMYNFHEKLK 295 Query 95 I-----------KRGKINETIIGDVFEALWAAVYIDSGRD 123 + GK+ + DVFEA + D R+ Sbjct 296 TNFDLKDENSNFQNGKL--KLYADVFEAYIGGLMEDDPRN 333 >RecName: Full=Interferon-induced, double-stranded RNA-activated protein kinase; AltName: Full=Eukaryotic translation initiation factor 2-alpha kinase 2; Short=eIF-2A protein kinase 2; AltName: Full=Interferon-inducible RNA-dependent protein kinase; AltName: Full=Protein kinase RNA-activated; Short=PKR; Short=Protein kinase R; AltName: Full=Tyrosine-protein kinase EIF2AK2 [Rattus norvegicus] Sequence ID: Q63184.1 Length: 513 Range 1: 26 to 75 Score:38.5 bits(88), Expect:0.029, Method:Compositional matrix adjust., Identities:20/50(40%), Positives:33/50(66%), Gaps:1/50(2%) Query 170 YRLISVEGPHHKKKFIVEAKIKEYR-TLGEGKSKKEAEQRAAEELIKLLE 218 Y+ ISV GP H ++F + I+E GEG+SK+EA+ AA+ +++L+ Sbjct 26 YKEISVTGPPHDRRFTFQVIIEEREFPEGEGRSKQEAKNNAAKLAVEILD 75 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2 [Mus musculus] Sequence ID: Q8CJ67.1 Length: 570 Range 1: 286 to 370 Score:38.1 bits(87), Expect:0.036, Method:Compositional matrix adjust., Identities:24/85(28%), Positives:47/85(55%), Gaps:0/85(0%) Query 130 LFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAK 189 LF+K + I+ A + + + L +I Q R ++ P+Y L+S G +++F+++ K Sbjct 286 LFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVK 345 Query 190 IKEYRTLGEGKSKKEAEQRAAEELI 214 + G G +KK A++ AAE ++ Sbjct 346 VGNEVATGTGPNKKIAKKNAAEAML 370 >RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2 [Homo sapiens] Sequence ID: Q9NUL3.2 Length: 570 Range 1: 286 to 370 Score:38.1 bits(87), Expect:0.040, Method:Compositional matrix adjust., Identities:24/85(28%), Positives:47/85(55%), Gaps:0/85(0%) Query 130 LFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAK 189 LF+K + I+ A E + + L +I Q + ++ P+Y L+S G +++F+++ K Sbjct 286 LFFKKRPKTIVKAGPEYGQGMNPISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVK 345 Query 190 IKEYRTLGEGKSKKEAEQRAAEELI 214 + G G +KK A++ AAE ++ Sbjct 346 VGNEVATGTGPNKKIAKKNAAEAML 370 >RecName: Full=Putative ribonuclease 3 [Invertebrate iridescent virus 3] Sequence ID: Q196V9.1 Length: 333 Range 1: 103 to 314 Score:37.7 bits(86), Expect:0.044, Method:Compositional matrix adjust., Identities:56/216(26%), Positives:99/216(45%), Gaps:29/216(13%) Query 24 ALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREG-----FLSPLKAYLISEE 78 A T S ++ +YE E +GD+ + FIV + P R ++ +K L S++ Sbjct 103 AFTSSSANELNNYELFEQMGDSTIGKFIVWSSYEKFPQLRGKPEAVEIVARMKINLGSKD 162 Query 79 FFNLLAQKLELHKFIRIK---RGKINETIIGDVFEALWAAV--YIDSGRDANFTRE-LFY 132 + +A+ L + FI R ++ + ++ DVFEAL I D N+++ L Y Sbjct 163 NLSQIAEDLGMWTFISATEEARHRLKKKLLEDVFEALIGVTEYIIYEFTDTNYSQPGLAY 222 Query 133 KLFKEDILSAIKEGRVKKDYKTILQEITQ-----KRWKER----PEY---RLISVEGPHH 180 +L +L +K DY T++ + ++K++ P Y R++ + Sbjct 223 QLVYSLLLKLFDPYILKIDYNTLVDSKNRLKGVFDQYKDKLGLQPVYQSERIVK----ND 278 Query 181 KKKFIVEAKIKEYRTLGEGKS--KKEAEQRAAEELI 214 K F+ + LGEG + KKEAE++A+E I Sbjct 279 KNVFLSKVYDGNGNFLGEGTAPLKKEAEKKASEVAI 314 >RecName: Full=Double-stranded RNA-specific adenosine deaminase; Short=DRADA [Rattus norvegicus] Sequence ID: P55266.1 Length: 1175 Range 1: 581 to 632 Score:38.1 bits(87), Expect:0.048, Method:Composition-based stats., Identities:23/53(43%), Positives:32/53(60%), Gaps:3/53(5%) Query 169 EYRLISVEGPHHKKKF--IVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEE 219 E+RL+S EGP H KF V + + ++ SKK A+Q AAEE +K L+E Sbjct 581 EFRLLSKEGPAHDPKFQYCVAVGAQTFPSV-SAPSKKVAKQMAAEEAMKALQE 632 >RecName: Full=Double-stranded RNA-specific editase B2; AltName: Full=RNA-dependent adenosine deaminase 3; AltName: Full=RNA-editing deaminase 2; AltName: Full=RNA-editing enzyme 2; AltName: Full=dsRNA adenosine deaminase B2 [Rattus norvegicus] Sequence ID: P97616.1 Length: 746 Range 1: 142 to 188 Score:38.1 bits(87), Expect:0.049, Method:Composition-based stats., Identities:18/47(38%), Positives:27/47(57%), Gaps:0/47(0%) Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 +YR++S GP H F V ++ G G +KK+A+ RAAE +K Sbjct 142 QYRMVSQTGPVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAEMALK 188 >RecName: Full=Double-stranded RNA-specific editase B2; AltName: Full=RNA-dependent adenosine deaminase 3; AltName: Full=RNA-editing deaminase 2; AltName: Full=RNA-editing enzyme 2; AltName: Full=dsRNA adenosine deaminase B2 [Mus musculus] Sequence ID: Q9JI20.2 Length: 745 Range 1: 141 to 187 Score:38.1 bits(87), Expect:0.050, Method:Composition-based stats., Identities:18/47(38%), Positives:27/47(57%), Gaps:0/47(0%) Query 169 EYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIK 215 +YR++S GP H F V ++ G G +KK+A+ RAAE +K Sbjct 141 QYRMVSQTGPVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAEMALK 187