******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.5.1 (Release date: Sun Jan 29 10:33:12 2023 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= swiss.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACDEFGHIKLMNPQRSTVWY Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ C0HM39|reviewed|rRNA 1.0000 254 O22415|reviewed|Ribosome 1.0000 570 P02879|reviewed|Ricin|ta 1.0000 576 P04399|reviewed|Protein 1.0000 280 P06750|reviewed|Agglutin 1.0000 564 P08026|reviewed|Shiga-li 1.0000 315 P09385|reviewed|Shiga-li 1.0000 319 P09989|reviewed|Ribosome 1.0000 289 P10149|reviewed|Shiga-li 1.0000 315 P10297|reviewed|Antivira 1.0000 313 P10593|reviewed|Albumin 1.0000 303 P11140|reviewed|Abrin-a| 1.0000 528 P16094|reviewed|Ribosome 1.0000 286 P20656|reviewed|Ribosome 1.0000 299 P21326|reviewed|Antivira 1.0000 278 P22244|reviewed|Protein 1.0000 281 P22851|reviewed|Ribosome 1.0000 250 P23339|reviewed|Antivira 1.0000 261 P24476|reviewed|Ribosome 1.0000 293 P24478|reviewed|Ribosome 1.0000 289 P24817|reviewed|Ribosome 1.0000 286 P25891|reviewed|Ribosome 1.0000 300 P25892|reviewed|Ribosome 1.0000 304 P27559|reviewed|Ribosome 1.0000 292 P27560|reviewed|Ribosome 1.0000 236 P27561|reviewed|Ribosome 1.0000 157 P28522|reviewed|Ribosome 1.0000 301 P28590|reviewed|Abrin-c| 1.0000 562 P29339|reviewed|Ribosome 1.0000 286 P33183|reviewed|Nigrin 1.0000 563 P33185|reviewed|Ribosome 1.0000 290 P33186|reviewed|Ribosome 1.0000 316 P34967|reviewed|Protein 1.0000 265 P56626|reviewed|Type 1.0000 294 P81446|reviewed|Beta-gal 1.0000 564 P82683|reviewed|Beta-gal 1.0000 569 P84530|reviewed|Ribosome 1.0000 241 P84531|reviewed|Ribosome 1.0000 244 P84786|reviewed|Ribosome 1.0000 257 P84853|reviewed|Ribosome 1.0000 261 P84854|reviewed|Ribosome 1.0000 261 P85101|reviewed|Ribosome 1.0000 234 P85208|reviewed|Dioicin- 1.0000 266 P93543|reviewed|Ribosome 1.0000 569 P98184|reviewed|Ribosome 1.0000 282 Q00465|reviewed|Ribosome 1.0000 277 Q00531|reviewed|60 1.0000 560 Q03464|reviewed|Antivira 1.0000 294 Q06076|reviewed|Abrin-d| 1.0000 528 Q06077|reviewed|Abrin-b| 1.0000 527 Q32GM1|reviewed|Shiga 1.0000 315 Q40772|reviewed|Antivira 1.0000 310 Q41358|reviewed|Ribosome 1.0000 570 Q41389|reviewed|Ribosome 1.0000 253 Q41391|reviewed|Ribosome 1.0000 253 Q5F0I3|reviewed|Ribosome 1.0000 300 Q6EH50|reviewed|Heterote 1.0000 312 Q6H266|reviewed|Beta-gal 1.0000 567 Q6ITZ3|reviewed|Beta-gal 1.0000 520 Q70US9|reviewed|Volkensi 1.0000 523 Q779K4|reviewed|Shiga 1.0000 315 Q7M1L6|reviewed|rRNA 1.0000 254 Q7M1Z2|reviewed|Ribosome 1.0000 253 Q9FBI2|reviewed|Shiga 1.0000 315 Q9FRX4|reviewed|Putative 1.0000 286 Q9M653|reviewed|Ribosome 1.0000 603 Q9M654|reviewed|Ribosome 1.0000 604 Q9M6E9|reviewed|Agglutin 1.0000 547 U3KRF8|reviewed|Seed 1.0000 519 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme swiss.fasta -protein -nmotifs 5 -minw 5 -maxw 15 model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values width: minw= 5 maxw= 15 nsites: minsites= 2 maxsites= 69 wnsites= 0.8 theta: spmap= pam spfuzz= 120 em: prior= megap b= 124340 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 24868 N= 69 sample: seed= 0 hsfrac= 0 searchsize= 24868 norand= no csites= 1000 Dirichlet mixture priors file: prior30.plib Letter frequencies in dataset: A 0.0755 C 0.0123 D 0.0518 E 0.0435 F 0.0405 G 0.0649 H 0.0113 I 0.0643 K 0.0469 L 0.0902 M 0.0202 N 0.0627 P 0.039 Q 0.0418 R 0.0535 S 0.0801 T 0.0761 V 0.0741 W 0.014 Y 0.0374 Background letter frequencies (from file dataset with add-one prior applied): A 0.0755 C 0.0123 D 0.0518 E 0.0436 F 0.0405 G 0.0649 H 0.0113 I 0.0643 K 0.0469 L 0.0902 M 0.0202 N 0.0627 P 0.039 Q 0.0418 R 0.0535 S 0.0801 T 0.0761 V 0.0741 W 0.014 Y 0.0374 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF LIQMVSEAARFRYIE MEME-1 width = 15 sites = 68 llr = 2064 E-value = 2.3e-571 ******************************************************************************** -------------------------------------------------------------------------------- Motif LIQMVSEAARFRYIE MEME-1 Description -------------------------------------------------------------------------------- Simplified A 3::::4:97:::::: pos.-specific C :::::1::::::::: probability D ::::::::::::::: matrix E ::::::a:::::::5 F 1:::::::::9:1:: G :::::::1::::::: H ::::::::::::::: I 27::1::::::::9: K :::::::::::4::: L 3:::::::1:::::: M :::7::::::::::: N :::::::::::1::: P ::::::::::::1:: Q ::8::::::::11:2 R :::::::::a:4::: S :::::4::1:::::2 T ::114:::1:::1:: V 12114::::::::1: W ::::::::::::::: Y ::::::::::1:6:: bits 6.5 5.8 5.2 4.5 * Relative 3.9 * * ** Entropy 3.2 ** ** ** * (43.8 bits) 2.6 *** ** ****** 1.9 ************** 1.3 *************** 0.6 *************** 0.0 --------------- Multilevel LIQMVSEAARFRYIE consensus A TA K Q sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LIQMVSEAARFRYIE MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- Q03464|reviewed|Antivira 193 6.01e-19 EKTEAEFLLV AIQMVSEAARFKYIE NQVKTNFNRA P84854|reviewed|Ribosome 169 6.01e-19 DKTEAEFLLV AIQMVSEAARFKYIE NQVKTNFNRA P84853|reviewed|Ribosome 169 6.01e-19 DKTEAKFLLV AIQMVSEAARFKYIE NQVKTNFNRD P23339|reviewed|Antivira 169 6.01e-19 EKIEAKFLLV AIQMVSEAARFKYIE NQVKTNFNRD P10297|reviewed|Antivira 192 6.01e-19 EKTEAEFLLV AIQMVSEAARFKYIE NQVKTNFNRA Q41358|reviewed|Ribosome 193 2.07e-18 TKPLARGLLV VIQMVSEAARFRYIE LRIRTSITDA P33183|reviewed|Nigrin 182 2.07e-18 GDSVARSLLV VIQMVSEAARFRYIE QEVRRSLQQA O22415|reviewed|Ribosome 193 2.07e-18 TKPLARGLLV VIQMVSEAARFRYIE LRIRTSITDA Q7M1L6|reviewed|rRNA 171 3.71e-18 VRNEARFLLI AIQMTAEAARFRYIQ NLVTFNFPKK Q41391|reviewed|Ribosome 170 3.71e-18 VKNEARFLLI AIQMTAEAARFRYIQ NLVIKNFPNK P27560|reviewed|Ribosome 142 3.71e-18 VKNEARFLLI AIQMTAEAARFRYIQ NLVTKNFPNK P24476|reviewed|Ribosome 194 3.71e-18 VKDEARFLLI AIQMTAEAARFRYIQ NLVTKNFPNK P20656|reviewed|Ribosome 194 3.71e-18 VKDEARFLLI AIQMTAEAARFRYIQ NLVIKNFPNK C0HM39|reviewed|rRNA 171 3.71e-18 VRNEARFLLI AIQMTAEAARFRYIQ NLVTFNFPKK P93543|reviewed|Ribosome 195 5.23e-18 NKRLARSLLV VIQMVSEAARFRYIQ LRIQASITDA P21326|reviewed|Antivira 190 1.00e-17 VKKQAKFFLL AIQMVSEAARFKYIS DKIPSEKYEE P11140|reviewed|Abrin-a| 158 1.56e-17 NEEKARTLIV IIQMVAEAARFRYIS NRVRVSIQTG Q9M653|reviewed|Ribosome 202 3.69e-17 EASIAKALLV VIQMVSEAARFRHIE ERVRRSFTAA P34967|reviewed|Protein 173 4.17e-17 DKTEAEFLLV AIQMVSEATRFKYIE NQVKTNFNRA P85101|reviewed|Ribosome 164 6.08e-17 GKNVAKFALI SIQMVAEAARFKYIE DQVINRGMYS P06750|reviewed|Agglutin 194 6.08e-17 IPTLARSFMV CIQMISEAARFQYIE GEMRTRIRYN P02879|reviewed|Ricin|ta 206 6.08e-17 LPTLARSFII CIQMISEAARFQYIE GEMRTRIRYN P84531|reviewed|Ribosome 152 1.02e-16 AEAAASALLV LIQTTSEAARFRYIE LQIANNVGTK P98184|reviewed|Ribosome 177 1.17e-16 GTSVPRAFIV IIQTVSEAARFKYIE QRVSENVGTK P29339|reviewed|Ribosome 175 1.17e-16 AQSAPSALLV LIQTTAEAARFKYIE RHVAKYVATN P24817|reviewed|Ribosome 175 1.17e-16 AQSAPSALLV LIQTTAEAARFKYIE RHVAKYVATN P16094|reviewed|Ribosome 177 1.17e-16 STAAAGALLV LIQTTAEAARFKYIE QQIQERAYRD Q9M6E9|reviewed|Agglutin 177 3.55e-16 DEEIARTLIV IIQMVAEAARFRYVS KLVVISLSNR Q41389|reviewed|Ribosome 170 3.97e-16 VKNEARFLLI AIQMTAEVARFRYIQ NLVTKNFPNK P27559|reviewed|Ribosome 194 3.97e-16 VKNEARFLLI AIQMTAEVARFRYIQ NLVTKNFPNK Q9M654|reviewed|Ribosome 205 4.96e-16 DSKAAKSLIV VIQMVSEAARFRRIE EQVRRSIADQ Q5F0I3|reviewed|Ribosome 178 4.96e-16 STSFRRSFIV IIQMVSEAARFKIIE AKIAKNLYGE Q7M1Z2|reviewed|Ribosome 170 5.59e-16 VKNEARFLLI AIQMTAEAVRFRYIQ NLVTKNFPNK Q9FRX4|reviewed|Putative 179 1.12e-15 SRSAPIAFLV LIQTTAEAARYKYIE KQIIDRISVS Q00465|reviewed|Ribosome 173 1.56e-15 STAAAAAFLV IIQTTAEASRFKYIE GQIIERISKN P56626|reviewed|Type 171 1.73e-15 YQSTAAALLV LIQCTAEAARYKYIE QQVSSHISSN P33186|reviewed|Ribosome 206 2.38e-15 PTEIASSLLV VIQMVSEAARFTFIE NQIRNNFQQR P28590|reviewed|Abrin-c| 192 2.95e-15 DEEKARTLIV IIQMASEAARYRYIS NRVGVSIRTG Q40772|reviewed|Antivira 191 3.63e-15 QKNEAEFLLI AVQMVTEASRFKYIE NKVKAKFDDA P85208|reviewed|Dioicin- 170 1.23e-14 QKNEAEFLLI AVQMITEASRFKYIE NKVKDSFDDA Q06077|reviewed|Abrin-b| 157 1.81e-14 DQEIARTLIV IIQMASEAARYRFIS YRVGVSIRTN P24478|reviewed|Ribosome 177 2.41e-14 ANSAASALMV LIQSTSEAARYKFIE QQIGKRVDKT P09989|reviewed|Ribosome 177 2.41e-14 ANSAASALMV LIQSTSEAARYKFIE QQIGKRVDKT P22851|reviewed|Ribosome 154 2.92e-14 STAAAAAFLV ILQTTAEASRFKYIE GQIIERIPKN Q6ITZ3|reviewed|Beta-gal 153 3.53e-14 TRTQARSILI LIQMISEAARFNPIL WRARQYINSG P81446|reviewed|Beta-gal 192 3.53e-14 TRTQARSILI LIQMISEAARFNPIL WRARQYINSG P82683|reviewed|Beta-gal 192 4.67e-14 TRAQARSIII LIQMISEAARFNPIF WRVRQDINSG Q6H266|reviewed|Beta-gal 192 5.12e-14 TRAQASSIII VIQMISEAARFNPIL WRARQYINRG Q06076|reviewed|Abrin-d| 158 5.12e-14 DEEKARTLIV IIQMASEAARYRCIS NRVGVSIRTG P84530|reviewed|Ribosome 153 5.12e-14 STAAAAAFLV IIQTTAESSRFKYIE GQIIMRISKN Q70US9|reviewed|Volkensi 156 1.26e-13 NNQIALGLVI CAGMVAEASRFRYIE GLVRQSIVGP U3KRF8|reviewed|Seed 157 4.57e-13 PKLLPLSFLV IIQMVLEASKFRFIE QSVAYSFKNE P33185|reviewed|Ribosome 177 5.40e-13 ASSAASALLV LIQSTAESARYKFIE QQIGKRVDKT Q9FBI2|reviewed|Shiga 183 2.69e-12 TQSVARAMLR FVTVTAEALRFRQIQ RGFRTTLDDL Q779K4|reviewed|Shiga 183 2.69e-12 TQSVARAMLR FVTVTAEALRFRQIQ RGFRTTLDDL Q32GM1|reviewed|Shiga 183 2.69e-12 TQSVARAMLR FVTVTAEALRFRQIQ RGFRTTLDDL P10149|reviewed|Shiga-li 183 2.69e-12 TQSVARAMLR FVTVTAEALRFRQIQ RGFRTTLDDL P09385|reviewed|Shiga-li 183 2.69e-12 TRDASRAVLR FVTVTAEALRFRQIQ REFRQALSET P08026|reviewed|Shiga-li 183 2.69e-12 TQSVARAMLR FVTVTAEALRFRQIQ RGFRTTLDDL Q6EH50|reviewed|Heterote 191 3.96e-12 SEKTEAEFLL VAIQISEAARFKYIE NQVKTNFNRA P28522|reviewed|Ribosome 201 4.71e-11 QADTKSKLVK LVVMVCEGLRFNTVS RTVDAGFNSQ P25892|reviewed|Ribosome 202 4.71e-11 QADTKSKLVK LVVMVCEGLRFNTVS RTVDAGFNSQ P25891|reviewed|Ribosome 201 4.71e-11 QADTKSKLVK LVVMVCEGLRFNTVS RTVDAGFNSQ P10593|reviewed|Albumin 201 1.95e-10 QADTKSKLVK LVVMVCEGLRFNTLS RTVDAGFNSQ P22244|reviewed|Protein 169 4.82e-10 QQQAREAVTT LLLMVNEATRFQTVS GFVAGLLHPK P04399|reviewed|Protein 168 4.82e-10 QQQAREAVTT LLLMVNEATRFQTVS GFVAGLLHPK Q00531|reviewed|60 195 7.05e-10 NDPVKQAVAT LAVAVCEAARFSPVS KVVNAGWIKD P84786|reviewed|Ribosome 161 1.02e-09 TRDRARSLIV VSQMFCEATRFVDIA NHFAFNLESS -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LIQMVSEAARFRYIE MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- Q03464|reviewed|Antivira 6e-19 192_[1]_87 P84854|reviewed|Ribosome 6e-19 168_[1]_78 P84853|reviewed|Ribosome 6e-19 168_[1]_78 P23339|reviewed|Antivira 6e-19 168_[1]_78 P10297|reviewed|Antivira 6e-19 191_[1]_107 Q41358|reviewed|Ribosome 2.1e-18 192_[1]_363 P33183|reviewed|Nigrin 2.1e-18 181_[1]_367 O22415|reviewed|Ribosome 2.1e-18 192_[1]_363 Q7M1L6|reviewed|rRNA 3.7e-18 170_[1]_69 Q41391|reviewed|Ribosome 3.7e-18 169_[1]_69 P27560|reviewed|Ribosome 3.7e-18 141_[1]_80 P24476|reviewed|Ribosome 3.7e-18 193_[1]_85 P20656|reviewed|Ribosome 3.7e-18 193_[1]_91 C0HM39|reviewed|rRNA 3.7e-18 170_[1]_69 P93543|reviewed|Ribosome 5.2e-18 194_[1]_360 P21326|reviewed|Antivira 1e-17 189_[1]_74 P11140|reviewed|Abrin-a| 1.6e-17 157_[1]_356 Q9M653|reviewed|Ribosome 3.7e-17 201_[1]_387 P34967|reviewed|Protein 4.2e-17 172_[1]_78 P85101|reviewed|Ribosome 6.1e-17 163_[1]_56 P06750|reviewed|Agglutin 6.1e-17 193_[1]_356 P02879|reviewed|Ricin|ta 6.1e-17 205_[1]_356 P84531|reviewed|Ribosome 1e-16 151_[1]_78 P98184|reviewed|Ribosome 1.2e-16 176_[1]_91 P29339|reviewed|Ribosome 1.2e-16 174_[1]_97 P24817|reviewed|Ribosome 1.2e-16 174_[1]_97 P16094|reviewed|Ribosome 1.2e-16 176_[1]_95 Q9M6E9|reviewed|Agglutin 3.6e-16 176_[1]_356 Q41389|reviewed|Ribosome 4e-16 169_[1]_69 P27559|reviewed|Ribosome 4e-16 193_[1]_84 Q9M654|reviewed|Ribosome 5e-16 204_[1]_385 Q5F0I3|reviewed|Ribosome 5e-16 177_[1]_108 Q7M1Z2|reviewed|Ribosome 5.6e-16 169_[1]_69 Q9FRX4|reviewed|Putative 1.1e-15 178_[1]_93 Q00465|reviewed|Ribosome 1.6e-15 172_[1]_90 P56626|reviewed|Type 1.7e-15 170_[1]_109 P33186|reviewed|Ribosome 2.4e-15 205_[1]_96 P28590|reviewed|Abrin-c| 2.9e-15 191_[1]_356 Q40772|reviewed|Antivira 3.6e-15 190_[1]_105 P85208|reviewed|Dioicin- 1.2e-14 169_[1]_82 Q06077|reviewed|Abrin-b| 1.8e-14 156_[1]_356 P24478|reviewed|Ribosome 2.4e-14 176_[1]_98 P09989|reviewed|Ribosome 2.4e-14 176_[1]_98 P22851|reviewed|Ribosome 2.9e-14 153_[1]_82 Q6ITZ3|reviewed|Beta-gal 3.5e-14 152_[1]_353 P81446|reviewed|Beta-gal 3.5e-14 191_[1]_358 P82683|reviewed|Beta-gal 4.7e-14 191_[1]_363 Q6H266|reviewed|Beta-gal 5.1e-14 191_[1]_361 Q06076|reviewed|Abrin-d| 5.1e-14 157_[1]_356 P84530|reviewed|Ribosome 5.1e-14 152_[1]_74 Q70US9|reviewed|Volkensi 1.3e-13 155_[1]_353 U3KRF8|reviewed|Seed 4.6e-13 156_[1]_348 P33185|reviewed|Ribosome 5.4e-13 176_[1]_99 Q9FBI2|reviewed|Shiga 2.7e-12 182_[1]_118 Q779K4|reviewed|Shiga 2.7e-12 182_[1]_118 Q32GM1|reviewed|Shiga 2.7e-12 182_[1]_118 P10149|reviewed|Shiga-li 2.7e-12 182_[1]_118 P09385|reviewed|Shiga-li 2.7e-12 182_[1]_122 P08026|reviewed|Shiga-li 2.7e-12 182_[1]_118 Q6EH50|reviewed|Heterote 4e-12 190_[1]_107 P28522|reviewed|Ribosome 4.7e-11 200_[1]_86 P25892|reviewed|Ribosome 4.7e-11 201_[1]_88 P25891|reviewed|Ribosome 4.7e-11 200_[1]_85 P10593|reviewed|Albumin 1.9e-10 200_[1]_88 P22244|reviewed|Protein 4.8e-10 168_[1]_98 P04399|reviewed|Protein 4.8e-10 167_[1]_98 Q00531|reviewed|60 7e-10 194_[1]_351 P84786|reviewed|Ribosome 1e-09 160_[1]_82 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LIQMVSEAARFRYIE MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF LIQMVSEAARFRYIE width=15 seqs=68 Q03464|reviewed|Antivira ( 193) AIQMVSEAARFKYIE 1 P84854|reviewed|Ribosome ( 169) AIQMVSEAARFKYIE 1 P84853|reviewed|Ribosome ( 169) AIQMVSEAARFKYIE 1 P23339|reviewed|Antivira ( 169) AIQMVSEAARFKYIE 1 P10297|reviewed|Antivira ( 192) AIQMVSEAARFKYIE 1 Q41358|reviewed|Ribosome ( 193) VIQMVSEAARFRYIE 1 P33183|reviewed|Nigrin ( 182) VIQMVSEAARFRYIE 1 O22415|reviewed|Ribosome ( 193) VIQMVSEAARFRYIE 1 Q7M1L6|reviewed|rRNA ( 171) AIQMTAEAARFRYIQ 1 Q41391|reviewed|Ribosome ( 170) AIQMTAEAARFRYIQ 1 P27560|reviewed|Ribosome ( 142) AIQMTAEAARFRYIQ 1 P24476|reviewed|Ribosome ( 194) AIQMTAEAARFRYIQ 1 P20656|reviewed|Ribosome ( 194) AIQMTAEAARFRYIQ 1 C0HM39|reviewed|rRNA ( 171) AIQMTAEAARFRYIQ 1 P93543|reviewed|Ribosome ( 195) VIQMVSEAARFRYIQ 1 P21326|reviewed|Antivira ( 190) AIQMVSEAARFKYIS 1 P11140|reviewed|Abrin-a| ( 158) IIQMVAEAARFRYIS 1 Q9M653|reviewed|Ribosome ( 202) VIQMVSEAARFRHIE 1 P34967|reviewed|Protein ( 173) AIQMVSEATRFKYIE 1 P85101|reviewed|Ribosome ( 164) SIQMVAEAARFKYIE 1 P06750|reviewed|Agglutin ( 194) CIQMISEAARFQYIE 1 P02879|reviewed|Ricin|ta ( 206) CIQMISEAARFQYIE 1 P84531|reviewed|Ribosome ( 152) LIQTTSEAARFRYIE 1 P98184|reviewed|Ribosome ( 177) IIQTVSEAARFKYIE 1 P29339|reviewed|Ribosome ( 175) LIQTTAEAARFKYIE 1 P24817|reviewed|Ribosome ( 175) LIQTTAEAARFKYIE 1 P16094|reviewed|Ribosome ( 177) LIQTTAEAARFKYIE 1 Q9M6E9|reviewed|Agglutin ( 177) IIQMVAEAARFRYVS 1 Q41389|reviewed|Ribosome ( 170) AIQMTAEVARFRYIQ 1 P27559|reviewed|Ribosome ( 194) AIQMTAEVARFRYIQ 1 Q9M654|reviewed|Ribosome ( 205) VIQMVSEAARFRRIE 1 Q5F0I3|reviewed|Ribosome ( 178) IIQMVSEAARFKIIE 1 Q7M1Z2|reviewed|Ribosome ( 170) AIQMTAEAVRFRYIQ 1 Q9FRX4|reviewed|Putative ( 179) LIQTTAEAARYKYIE 1 Q00465|reviewed|Ribosome ( 173) IIQTTAEASRFKYIE 1 P56626|reviewed|Type ( 171) LIQCTAEAARYKYIE 1 P33186|reviewed|Ribosome ( 206) VIQMVSEAARFTFIE 1 P28590|reviewed|Abrin-c| ( 192) IIQMASEAARYRYIS 1 Q40772|reviewed|Antivira ( 191) AVQMVTEASRFKYIE 1 P85208|reviewed|Dioicin- ( 170) AVQMITEASRFKYIE 1 Q06077|reviewed|Abrin-b| ( 157) IIQMASEAARYRFIS 1 P24478|reviewed|Ribosome ( 177) LIQSTSEAARYKFIE 1 P09989|reviewed|Ribosome ( 177) LIQSTSEAARYKFIE 1 P22851|reviewed|Ribosome ( 154) ILQTTAEASRFKYIE 1 Q6ITZ3|reviewed|Beta-gal ( 153) LIQMISEAARFNPIL 1 P81446|reviewed|Beta-gal ( 192) LIQMISEAARFNPIL 1 P82683|reviewed|Beta-gal ( 192) LIQMISEAARFNPIF 1 Q6H266|reviewed|Beta-gal ( 192) VIQMISEAARFNPIL 1 Q06076|reviewed|Abrin-d| ( 158) IIQMASEAARYRCIS 1 P84530|reviewed|Ribosome ( 153) IIQTTAESSRFKYIE 1 Q70US9|reviewed|Volkensi ( 156) CAGMVAEASRFRYIE 1 U3KRF8|reviewed|Seed ( 157) IIQMVLEASKFRFIE 1 P33185|reviewed|Ribosome ( 177) LIQSTAESARYKFIE 1 Q9FBI2|reviewed|Shiga ( 183) FVTVTAEALRFRQIQ 1 Q779K4|reviewed|Shiga ( 183) FVTVTAEALRFRQIQ 1 Q32GM1|reviewed|Shiga ( 183) FVTVTAEALRFRQIQ 1 P10149|reviewed|Shiga-li ( 183) FVTVTAEALRFRQIQ 1 P09385|reviewed|Shiga-li ( 183) FVTVTAEALRFRQIQ 1 P08026|reviewed|Shiga-li ( 183) FVTVTAEALRFRQIQ 1 Q6EH50|reviewed|Heterote ( 191) VAIQISEAARFKYIE 1 P28522|reviewed|Ribosome ( 201) LVVMVCEGLRFNTVS 1 P25892|reviewed|Ribosome ( 202) LVVMVCEGLRFNTVS 1 P25891|reviewed|Ribosome ( 201) LVVMVCEGLRFNTVS 1 P10593|reviewed|Albumin ( 201) LVVMVCEGLRFNTLS 1 P22244|reviewed|Protein ( 169) LLLMVNEATRFQTVS 1 P04399|reviewed|Protein ( 168) LLLMVNEATRFQTVS 1 Q00531|reviewed|60 ( 195) LAVAVCEAARFSPVS 1 P84786|reviewed|Ribosome ( 161) VSQMFCEATRFVDIA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LIQMVSEAARFRYIE MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 15 n= 23902 bayes= 9.24969 E= 2.3e-571 174 179 -615 -499 108 -528 -349 132 -486 159 -238 -552 -516 -486 -508 -224 -403 101 -439 -421 -143 -315 -471 -425 -328 -514 -367 344 -402 -58 -116 -478 -486 -452 -471 -282 -379 111 -435 -394 -443 -393 -641 -410 -483 -219 -254 -165 -519 -147 -323 -580 -560 417 -515 -533 10 1 -544 -564 -185 30 -727 -652 -576 -485 -521 -520 -661 -546 505 -660 -573 -150 -659 -78 78 26 -633 -633 -77 -462 -849 -770 -144 -805 -727 94 -780 -459 -439 -830 -777 -818 -844 -765 234 252 -796 -725 244 282 -757 -719 -739 -481 -609 -756 -757 -260 -632 -110 -590 -685 -730 239 -130 -597 -753 -788 -603 -587 -318 450 -693 -608 -445 -652 -630 -714 -626 -571 -682 -481 -655 -659 -674 -674 -661 -693 351 -269 -613 -536 -563 -19 -471 -556 -560 -549 -445 -602 -558 -567 -578 -122 -450 -127 -586 -627 316 -307 -657 -586 -606 -422 -511 -594 -611 61 -489 -634 -570 -603 -621 35 -40 -214 -630 -668 -460 -327 -539 -497 -566 -505 -195 -528 -121 -505 -450 -472 -433 -340 414 -490 -518 -592 -406 -529 -776 -594 -811 -774 442 -792 -334 -685 -740 -606 -583 -719 -756 -679 -716 -744 -777 -696 -366 172 -555 -583 -636 -441 -734 -612 -309 -647 290 -592 -504 86 -610 52 296 -235 -228 -230 -619 -609 -283 4 -188 -301 143 -414 105 -196 -320 -300 -233 -394 47 62 -183 -317 -20 -325 -177 390 -584 -471 -849 -780 -585 -835 -768 375 -790 -229 -428 -843 -793 -838 -866 -801 -612 59 -813 -739 -213 -661 -287 351 -152 -570 -412 -676 -390 -107 -551 -535 -531 244 -540 119 -555 -603 -764 -688 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LIQMVSEAARFRYIE MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 15 nsites= 68 E= 2.3e-571 0.264706 0.044118 0.000000 0.000000 0.088235 0.000000 0.000000 0.161765 0.000000 0.279412 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.147059 0.000000 0.000000 0.044118 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.720588 0.000000 0.044118 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.176471 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.014706 0.000000 0.029412 0.000000 0.000000 0.000000 0.779412 0.000000 0.000000 0.088235 0.073529 0.000000 0.000000 0.014706 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.691176 0.000000 0.000000 0.014706 0.000000 0.044118 0.132353 0.088235 0.000000 0.000000 0.044118 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.117647 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.397059 0.426471 0.000000 0.000000 0.411765 0.088235 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.029412 0.000000 0.000000 0.000000 0.426471 0.029412 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.882353 0.000000 0.000000 0.000000 0.000000 0.058824 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.029412 0.000000 0.029412 0.000000 0.000000 0.676471 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.147059 0.000000 0.000000 0.000000 0.000000 0.000000 0.102941 0.058824 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.985294 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.882353 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.117647 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.352941 0.000000 0.000000 0.117647 0.000000 0.058824 0.426471 0.014706 0.014706 0.014706 0.000000 0.000000 0.000000 0.014706 0.014706 0.000000 0.088235 0.000000 0.014706 0.014706 0.000000 0.000000 0.000000 0.000000 0.073529 0.088235 0.014706 0.000000 0.088235 0.000000 0.000000 0.588235 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.882353 0.000000 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.102941 0.000000 0.000000 0.014706 0.000000 0.000000 0.500000 0.014706 0.000000 0.000000 0.000000 0.000000 0.044118 0.000000 0.000000 0.000000 0.235294 0.000000 0.191176 0.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LIQMVSEAARFRYIE MEME-1 regular expression -------------------------------------------------------------------------------- [LA]IQM[VT][SA]EAARF[RK]YI[EQ] -------------------------------------------------------------------------------- Time 10.96 secs. ******************************************************************************** ******************************************************************************** MOTIF ITLAJDVTNLYVVGY MEME-2 width = 15 sites = 69 llr = 1816 E-value = 7.2e-455 ******************************************************************************** -------------------------------------------------------------------------------- Motif ITLAJDVTNLYVVGY MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::16:::::1:::4: pos.-specific C ::::::::::::::: probability D :::::5:21:::::: matrix E :1:::1:1::::1:: F ::::::::::::::3 G :::2:::::::::6: H ::::::::::::::: I 5::15::::::1::: K :::::1::::::::: L 1:6:3::::6:2::: M :::1::1:::::2:: N :::::::29:::::: P ::::::::::::::: Q ::::::::::::::: R :1:::34:::::::: S :2::::::::::::: T :6:::::4::::1:: V 3:2:2:51:2:76:: W ::::::::::::::: Y ::::::::::a:::7 bits 6.5 5.8 5.2 4.5 * Relative 3.9 * * Entropy 3.2 * * * (38.0 bits) 2.6 * ** * ***** 1.9 ******* ******* 1.3 *************** 0.6 *************** 0.0 --------------- Multilevel ITLAIDVTNLYVVGY consensus VSVGLRRD V MAF sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ITLAJDVTNLYVVGY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- Q6EH50|reviewed|Heterote 84 7.58e-16 VELQGSNKKT ITLMLRRNNLYVMGY SDPFDTSKCR P84854|reviewed|Ribosome 62 7.58e-16 VKLQDASSKT ITLMLRRNNLYVMGY SDLYNGKCRY P84853|reviewed|Ribosome 62 7.58e-16 VKLQGASQKT ITLMLRRNNLYVMGY SDPFNGNCRY P23339|reviewed|Antivira 62 7.58e-16 VKLQGASLKT ITLMLRRNNLYVMGY SDPYDNKCRY P10297|reviewed|Antivira 84 7.58e-16 VELQGSNKKT ITLMLRRNNLYVMGY SDPFETNKCR Q6ITZ3|reviewed|Beta-gal 65 1.33e-15 VELTNEGGDS ITAAIDVTNLYVVAY QAGSQSYFLS Q6H266|reviewed|Beta-gal 99 1.33e-15 VELTNQWGDS ITAAIDVTNLYVVAY QAAGQSYYLR P82683|reviewed|Beta-gal 99 1.33e-15 VELTNQGGDS ITAAIDVTNLYVVAY QAGDQSYFLR P81446|reviewed|Beta-gal 99 1.33e-15 VELTNEGGDS ITAAIDVTNLYVVAY QAGDQSYFLR P34967|reviewed|Protein 66 2.25e-15 AKLSSGEVKS ITLMLRRHNLYVMGY SDPYDNKCRY Q03464|reviewed|Antivira 86 2.68e-15 VTLQDSSLKT ITLMLKRNNLYVMGY ADTYNGKCRY P24478|reviewed|Ribosome 83 2.68e-15 IHLTNYADET ISVAIDVTNVYVMGY RAGDTSYFFN P84530|reviewed|Ribosome 60 3.71e-15 MKLSNYDGKA ITVAIDVTNVYIMGY LVNSTSYFFN P02879|reviewed|Ricin|ta 105 6.95e-15 VELSNHAELS VTLALDVTNAYVVGY RAGNSAYFFH P29339|reviewed|Ribosome 83 8.08e-15 LDLTSYAYET ISVAIDVTNVYVVAY RTRDVSYFFK P24817|reviewed|Ribosome 83 8.08e-15 LNLTSYAYET ISVAIDVTNVYVVAY RTRDVSYFFK P33183|reviewed|Nigrin 92 1.09e-14 VPLTNYNGNT VTLAVDVTNLYVVAF SGNANSYFFK P22851|reviewed|Ribosome 61 1.09e-14 MQLSNYDAKA ITMAIDVTNVYIMGY LVNSTSYFAN Q00465|reviewed|Ribosome 80 2.18e-14 MTLSNYDGKA ITVAVDVTNVYIMGY LVNSTSYFFN P28522|reviewed|Ribosome 84 2.18e-14 YTELKTRTSS ITLAIRMDNLYLVGF RTPGGVWWEF P25892|reviewed|Ribosome 84 2.18e-14 YTELKTRTSS ITLAIRMDNLYLVGF RTPGGVWWEF P25891|reviewed|Ribosome 84 2.18e-14 YTELKTRTSS ITLAIRMDNLYLVGF RTPGGVWWEF P16094|reviewed|Ribosome 83 2.18e-14 MHLFNYDGKT ITVAVDVTNVYIMGY LADTTSYFFN P10593|reviewed|Albumin 84 2.18e-14 YTELKTRTSS ITLAIRMDNLYLVGF RTPGGVWWEL P09989|reviewed|Ribosome 83 2.18e-14 IHLTNYADET ISVAIDVTNVYIMGY RAGDTSYFFN Q41358|reviewed|Ribosome 96 2.49e-14 VPLTNPSGDT VTLAIDVVNLYVVAF SSNGKSYFFS O22415|reviewed|Ribosome 96 2.49e-14 VPLTNPSGDT VTLAIDVVNLYVVAF SSNGRSYFFS Q9FRX4|reviewed|Putative 86 5.40e-14 MQLSNYEGNT ITMAVDVTNVYIMGY LVNGTSYFFN Q06076|reviewed|Abrin-d| 64 7.78e-14 VELSNSERES IEVGIDVTNAYVVAY RAGSQSYFLR P28590|reviewed|Abrin-c| 98 7.78e-14 VELSNSERES IEVGIDVTNAYVVAY RAGSQSYFLR P11140|reviewed|Abrin-a| 64 7.78e-14 VELSNSDTES IEVGIDVTNAYVVAY RAGTQSYFLR P33185|reviewed|Ribosome 83 9.86e-14 LHLTNYADET ISVAVDVTNVYIMGY LAGDVSYFFN Q7M1Z2|reviewed|Ribosome 62 1.39e-13 RINFQSSRGT VSLGLKRDNLYVVAY LAMDNTNVNR Q41391|reviewed|Ribosome 62 1.39e-13 RINFQSSRGT VSLGLKRDNLYVVAY LAMDNTNVNR Q41389|reviewed|Ribosome 62 1.39e-13 RINFQSSRGT VSLGLKRDNLYVVAY LAMDNTNVNR P27561|reviewed|Ribosome 86 1.39e-13 RINFQSSRGT VSLGLKRDNLYVVAY LAMDNTNVNR P27559|reviewed|Ribosome 86 1.39e-13 RINFQSSRGT VSLGLKRDNLYVVAY LAMDNTNVNR P20656|reviewed|Ribosome 86 1.39e-13 RINFQSSRGT VSLGLKRDNLYVVAY LAMDNTNVNR Q7M1L6|reviewed|rRNA 63 1.56e-13 RINLQGPRGT VSLGLRRENLYVVAY LAMDNTNTNK P24476|reviewed|Ribosome 86 1.56e-13 RLNFQGPRGT VSLGLRRENLYVVAY LAMDNANVNR C0HM39|reviewed|rRNA 63 1.56e-13 RINLQGPRGT VSLGLRRENLYVVAY LAMDNTNTNK P98184|reviewed|Ribosome 83 1.95e-13 VTLTNYNGES VTVALDVVNVYVVAY RAGNTAYFLA P06750|reviewed|Agglutin 94 2.43e-13 VELSNHAELS VTLALDVTNAYVVGC RAGNSAYFFH P27560|reviewed|Ribosome 34 3.36e-13 RLNFQSSRGT VSLGLKRENLYVVAY LAMDNANVNR Q5F0I3|reviewed|Ribosome 85 1.02e-12 INLFNYNGDK ITLGIDVFDVYVVGF LTGTNSYIFK P84531|reviewed|Ribosome 60 1.37e-12 IDLVNYDGQS ITAAIDVLNVYIVAY STGTVSYFFQ Q06077|reviewed|Abrin-b| 64 2.63e-12 VELSNSDTES IEAGIDVSNAYVVAY RAGNRSYFLR P21326|reviewed|Antivira 90 3.15e-12 IDLIVSSTQK ITLAIDMADLYVLGY SDIANNKGRA Q9M6E9|reviewed|Agglutin 83 3.77e-12 VELSYSDTVS IQLGIDLTNAYVVAY RAGSESFFFR Q40772|reviewed|Antivira 84 5.85e-12 LVDLKFGSGT FTLAIRRGNLYLEGY SDIYNGKCRY P85208|reviewed|Dioicin- 63 5.85e-12 KLGSEKDAKT FTLAIRRGNLYLEGY SDIYNEKCRY P56626|reviewed|Type 79 5.85e-12 FNLTNYNDET VTVAVNVTNVYIVAY RADAVSYFFE Q9M653|reviewed|Ribosome 106 8.24e-12 VHLTGRNGKT VILALDVTNLYVAAF SANNVAYFFR Q9M654|reviewed|Ribosome 111 9.76e-12 VRLINLDGNV VTIAVDVTSLYVVAF SANNNGYFFS P93543|reviewed|Ribosome 98 3.04e-11 VRLTNPSRKK VTLAIDVVTFYVVAF AQNDRSYFFS Q9FBI2|reviewed|Shiga 89 4.49e-11 IDPEEGRFNN LRLIVERNNLYVTGF VNRTNNVFYR Q779K4|reviewed|Shiga 89 4.49e-11 IDPEEGRFNN LRLIVERNNLYVTGF VNRTNNVFYR Q32GM1|reviewed|Shiga 89 4.49e-11 IDPEEGRFNN LRLIVERNNLYVTGF VNRTNNVFYR P10149|reviewed|Shiga-li 89 4.49e-11 IDPEEGRFNN LRLIVERNNLYVTGF VNRTNNVFYR P08026|reviewed|Shiga-li 89 4.49e-11 IDPEEGRFNN LRLIVERNNLYVTGF VNRTNNVFYR P22244|reviewed|Protein 77 7.08e-11 VLKASPTSAG LTLAIRADNIYLEGF KSSDGTWWEL P04399|reviewed|Protein 76 7.08e-11 VLKASPTSAG LTLAIRADNIYLEGF KSSDGTWWEL P33186|reviewed|Ribosome 110 1.19e-10 VALSNDNGQL AEIAIDVTSVYVVGY QVRNRSYFFK Q70US9|reviewed|Volkensi 64 1.37e-10 LIQLTGYVGS VTLIMDVRNAYLLGY LSHNVLYHFN U3KRF8|reviewed|Seed 63 2.11e-10 LTLTSNQDES ITLAIDVEDMVAVAY QPAGSHESYF P09385|reviewed|Shiga-li 89 3.00e-10 LDVYQARFDH LRLIIEQNNLYVAGF VNTATNTFYR P85101|reviewed|Ribosome 59 3.45e-10 NLVLPFNRNT ITLAFRASDAYLVGF QDRDSKTNKL Q00531|reviewed|60 84 2.80e-09 GKTQGTTTPK PKVAIRSDDAYIMGF TNSTGRWFQL P84786|reviewed|Ribosome 69 3.29e-08 DLKLTFRGQV TTVRIHRDDLVLRGY QMQGAGKWLE -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ITLAJDVTNLYVVGY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- Q6EH50|reviewed|Heterote 7.6e-16 83_[2]_214 P84854|reviewed|Ribosome 7.6e-16 61_[2]_185 P84853|reviewed|Ribosome 7.6e-16 61_[2]_185 P23339|reviewed|Antivira 7.6e-16 61_[2]_185 P10297|reviewed|Antivira 7.6e-16 83_[2]_215 Q6ITZ3|reviewed|Beta-gal 1.3e-15 64_[2]_441 Q6H266|reviewed|Beta-gal 1.3e-15 98_[2]_454 P82683|reviewed|Beta-gal 1.3e-15 98_[2]_456 P81446|reviewed|Beta-gal 1.3e-15 98_[2]_451 P34967|reviewed|Protein 2.2e-15 65_[2]_185 Q03464|reviewed|Antivira 2.7e-15 85_[2]_194 P24478|reviewed|Ribosome 2.7e-15 82_[2]_192 P84530|reviewed|Ribosome 3.7e-15 59_[2]_167 P02879|reviewed|Ricin|ta 7e-15 104_[2]_457 P29339|reviewed|Ribosome 8.1e-15 82_[2]_189 P24817|reviewed|Ribosome 8.1e-15 82_[2]_189 P33183|reviewed|Nigrin 1.1e-14 91_[2]_457 P22851|reviewed|Ribosome 1.1e-14 60_[2]_175 Q00465|reviewed|Ribosome 2.2e-14 79_[2]_183 P28522|reviewed|Ribosome 2.2e-14 83_[2]_203 P25892|reviewed|Ribosome 2.2e-14 83_[2]_206 P25891|reviewed|Ribosome 2.2e-14 83_[2]_202 P16094|reviewed|Ribosome 2.2e-14 82_[2]_189 P10593|reviewed|Albumin 2.2e-14 83_[2]_205 P09989|reviewed|Ribosome 2.2e-14 82_[2]_192 Q41358|reviewed|Ribosome 2.5e-14 95_[2]_460 O22415|reviewed|Ribosome 2.5e-14 95_[2]_460 Q9FRX4|reviewed|Putative 5.4e-14 85_[2]_186 Q06076|reviewed|Abrin-d| 7.8e-14 63_[2]_450 P28590|reviewed|Abrin-c| 7.8e-14 97_[2]_450 P11140|reviewed|Abrin-a| 7.8e-14 63_[2]_450 P33185|reviewed|Ribosome 9.9e-14 82_[2]_193 Q7M1Z2|reviewed|Ribosome 1.4e-13 61_[2]_177 Q41391|reviewed|Ribosome 1.4e-13 61_[2]_177 Q41389|reviewed|Ribosome 1.4e-13 61_[2]_177 P27561|reviewed|Ribosome 1.4e-13 85_[2]_57 P27559|reviewed|Ribosome 1.4e-13 85_[2]_192 P20656|reviewed|Ribosome 1.4e-13 85_[2]_199 Q7M1L6|reviewed|rRNA 1.6e-13 62_[2]_177 P24476|reviewed|Ribosome 1.6e-13 85_[2]_193 C0HM39|reviewed|rRNA 1.6e-13 62_[2]_177 P98184|reviewed|Ribosome 2e-13 82_[2]_185 P06750|reviewed|Agglutin 2.4e-13 93_[2]_456 P27560|reviewed|Ribosome 3.4e-13 33_[2]_188 Q5F0I3|reviewed|Ribosome 1e-12 84_[2]_201 P84531|reviewed|Ribosome 1.4e-12 59_[2]_170 Q06077|reviewed|Abrin-b| 2.6e-12 63_[2]_449 P21326|reviewed|Antivira 3.2e-12 89_[2]_174 Q9M6E9|reviewed|Agglutin 3.8e-12 82_[2]_450 Q40772|reviewed|Antivira 5.8e-12 83_[2]_212 P85208|reviewed|Dioicin- 5.8e-12 62_[2]_189 P56626|reviewed|Type 5.8e-12 78_[2]_201 Q9M653|reviewed|Ribosome 8.2e-12 105_[2]_483 Q9M654|reviewed|Ribosome 9.8e-12 110_[2]_479 P93543|reviewed|Ribosome 3e-11 97_[2]_457 Q9FBI2|reviewed|Shiga 4.5e-11 88_[2]_212 Q779K4|reviewed|Shiga 4.5e-11 88_[2]_212 Q32GM1|reviewed|Shiga 4.5e-11 88_[2]_212 P10149|reviewed|Shiga-li 4.5e-11 88_[2]_212 P08026|reviewed|Shiga-li 4.5e-11 88_[2]_212 P22244|reviewed|Protein 7.1e-11 76_[2]_190 P04399|reviewed|Protein 7.1e-11 75_[2]_190 P33186|reviewed|Ribosome 1.2e-10 109_[2]_192 Q70US9|reviewed|Volkensi 1.4e-10 63_[2]_445 U3KRF8|reviewed|Seed 2.1e-10 62_[2]_442 P09385|reviewed|Shiga-li 3e-10 88_[2]_216 P85101|reviewed|Ribosome 3.4e-10 58_[2]_161 Q00531|reviewed|60 2.8e-09 83_[2]_462 P84786|reviewed|Ribosome 3.3e-08 68_[2]_174 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ITLAJDVTNLYVVGY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ITLAJDVTNLYVVGY width=15 seqs=69 Q6EH50|reviewed|Heterote ( 84) ITLMLRRNNLYVMGY 1 P84854|reviewed|Ribosome ( 62) ITLMLRRNNLYVMGY 1 P84853|reviewed|Ribosome ( 62) ITLMLRRNNLYVMGY 1 P23339|reviewed|Antivira ( 62) ITLMLRRNNLYVMGY 1 P10297|reviewed|Antivira ( 84) ITLMLRRNNLYVMGY 1 Q6ITZ3|reviewed|Beta-gal ( 65) ITAAIDVTNLYVVAY 1 Q6H266|reviewed|Beta-gal ( 99) ITAAIDVTNLYVVAY 1 P82683|reviewed|Beta-gal ( 99) ITAAIDVTNLYVVAY 1 P81446|reviewed|Beta-gal ( 99) ITAAIDVTNLYVVAY 1 P34967|reviewed|Protein ( 66) ITLMLRRHNLYVMGY 1 Q03464|reviewed|Antivira ( 86) ITLMLKRNNLYVMGY 1 P24478|reviewed|Ribosome ( 83) ISVAIDVTNVYVMGY 1 P84530|reviewed|Ribosome ( 60) ITVAIDVTNVYIMGY 1 P02879|reviewed|Ricin|ta ( 105) VTLALDVTNAYVVGY 1 P29339|reviewed|Ribosome ( 83) ISVAIDVTNVYVVAY 1 P24817|reviewed|Ribosome ( 83) ISVAIDVTNVYVVAY 1 P33183|reviewed|Nigrin ( 92) VTLAVDVTNLYVVAF 1 P22851|reviewed|Ribosome ( 61) ITMAIDVTNVYIMGY 1 Q00465|reviewed|Ribosome ( 80) ITVAVDVTNVYIMGY 1 P28522|reviewed|Ribosome ( 84) ITLAIRMDNLYLVGF 1 P25892|reviewed|Ribosome ( 84) ITLAIRMDNLYLVGF 1 P25891|reviewed|Ribosome ( 84) ITLAIRMDNLYLVGF 1 P16094|reviewed|Ribosome ( 83) ITVAVDVTNVYIMGY 1 P10593|reviewed|Albumin ( 84) ITLAIRMDNLYLVGF 1 P09989|reviewed|Ribosome ( 83) ISVAIDVTNVYIMGY 1 Q41358|reviewed|Ribosome ( 96) VTLAIDVVNLYVVAF 1 O22415|reviewed|Ribosome ( 96) VTLAIDVVNLYVVAF 1 Q9FRX4|reviewed|Putative ( 86) ITMAVDVTNVYIMGY 1 Q06076|reviewed|Abrin-d| ( 64) IEVGIDVTNAYVVAY 1 P28590|reviewed|Abrin-c| ( 98) IEVGIDVTNAYVVAY 1 P11140|reviewed|Abrin-a| ( 64) IEVGIDVTNAYVVAY 1 P33185|reviewed|Ribosome ( 83) ISVAVDVTNVYIMGY 1 Q7M1Z2|reviewed|Ribosome ( 62) VSLGLKRDNLYVVAY 1 Q41391|reviewed|Ribosome ( 62) VSLGLKRDNLYVVAY 1 Q41389|reviewed|Ribosome ( 62) VSLGLKRDNLYVVAY 1 P27561|reviewed|Ribosome ( 86) VSLGLKRDNLYVVAY 1 P27559|reviewed|Ribosome ( 86) VSLGLKRDNLYVVAY 1 P20656|reviewed|Ribosome ( 86) VSLGLKRDNLYVVAY 1 Q7M1L6|reviewed|rRNA ( 63) VSLGLRRENLYVVAY 1 P24476|reviewed|Ribosome ( 86) VSLGLRRENLYVVAY 1 C0HM39|reviewed|rRNA ( 63) VSLGLRRENLYVVAY 1 P98184|reviewed|Ribosome ( 83) VTVALDVVNVYVVAY 1 P06750|reviewed|Agglutin ( 94) VTLALDVTNAYVVGC 1 P27560|reviewed|Ribosome ( 34) VSLGLKRENLYVVAY 1 Q5F0I3|reviewed|Ribosome ( 85) ITLGIDVFDVYVVGF 1 P84531|reviewed|Ribosome ( 60) ITAAIDVLNVYIVAY 1 Q06077|reviewed|Abrin-b| ( 64) IEAGIDVSNAYVVAY 1 P21326|reviewed|Antivira ( 90) ITLAIDMADLYVLGY 1 Q9M6E9|reviewed|Agglutin ( 83) IQLGIDLTNAYVVAY 1 Q40772|reviewed|Antivira ( 84) FTLAIRRGNLYLEGY 1 P85208|reviewed|Dioicin- ( 63) FTLAIRRGNLYLEGY 1 P56626|reviewed|Type ( 79) VTVAVNVTNVYIVAY 1 Q9M653|reviewed|Ribosome ( 106) VILALDVTNLYVAAF 1 Q9M654|reviewed|Ribosome ( 111) VTIAVDVTSLYVVAF 1 P93543|reviewed|Ribosome ( 98) VTLAIDVVTFYVVAF 1 Q9FBI2|reviewed|Shiga ( 89) LRLIVERNNLYVTGF 1 Q779K4|reviewed|Shiga ( 89) LRLIVERNNLYVTGF 1 Q32GM1|reviewed|Shiga ( 89) LRLIVERNNLYVTGF 1 P10149|reviewed|Shiga-li ( 89) LRLIVERNNLYVTGF 1 P08026|reviewed|Shiga-li ( 89) LRLIVERNNLYVTGF 1 P22244|reviewed|Protein ( 77) LTLAIRADNIYLEGF 1 P04399|reviewed|Protein ( 76) LTLAIRADNIYLEGF 1 P33186|reviewed|Ribosome ( 110) AEIAIDVTSVYVVGY 1 Q70US9|reviewed|Volkensi ( 64) VTLIMDVRNAYLLGY 1 U3KRF8|reviewed|Seed ( 63) ITLAIDVEDMVAVAY 1 P09385|reviewed|Shiga-li ( 89) LRLIIEQNNLYVAGF 1 P85101|reviewed|Ribosome ( 59) ITLAFRASDAYLVGF 1 Q00531|reviewed|60 ( 84) PKVAIRSDDAYIMGF 1 P84786|reviewed|Ribosome ( 69) TTVRIHRDDLVLRGY 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ITLAJDVTNLYVVGY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 15 n= 23902 bayes= 8.43215 E= 7.2e-455 -250 -309 -473 -423 -104 -508 -357 318 -401 13 -116 -476 -211 -447 -466 -435 -252 162 -427 -389 -425 -348 -516 53 -543 -571 -364 -211 -159 -544 -367 -408 -518 -154 51 132 296 -426 -548 -582 16 -502 -867 -762 -446 -821 -635 -89 -763 280 58 -840 -746 -716 -771 -785 -641 154 -629 -646 285 -391 -761 -707 -687 182 -591 64 -710 -662 230 -694 -592 -672 -188 -439 -521 -554 -724 -746 -660 -541 -932 -831 -133 -876 -674 291 -832 176 -28 -904 -790 -748 -827 -859 -688 123 -623 -654 -537 -602 320 103 -737 -518 41 -702 133 -654 -568 -181 -581 -384 233 -489 -549 -663 -679 -627 -71 -335 -616 -482 -399 -526 -340 -325 -345 -208 181 -544 -527 -142 268 -225 -426 263 -468 -451 -178 -411 186 80 -147 -112 53 -469 -200 -238 -329 137 -384 -236 -140 -118 213 -41 -479 -419 -485 -415 47 -402 -531 -421 -140 -516 -394 -575 -473 376 -481 -394 -478 -143 -237 -554 -499 -505 90 -509 -867 -753 -132 -799 -597 -93 -749 267 -26 -825 -732 -689 -748 -758 -641 153 -589 -613 -823 -661 -854 -842 -382 -807 -425 -748 -812 -693 -671 -798 -793 -758 -786 -813 -840 -135 -461 469 -230 -475 -871 -798 -592 -848 -788 122 -813 81 -441 -863 -805 -858 -888 -819 -619 318 -830 -755 -119 -297 -600 35 -351 -516 -337 -272 -468 -126 344 -540 -505 -472 -181 -450 -8 286 -429 -411 257 -468 -813 -788 -800 307 -660 -833 -818 -815 -711 -768 -655 -754 -789 -514 -602 -678 -795 -840 -780 22 -815 -776 291 -797 -327 -688 -739 -611 -585 -715 -761 -675 -713 -745 -776 -698 -359 417 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ITLAJDVTNLYVVGY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 15 nsites= 69 E= 7.2e-455 0.014493 0.000000 0.000000 0.000000 0.028986 0.000000 0.000000 0.507246 0.000000 0.115942 0.000000 0.000000 0.014493 0.000000 0.000000 0.000000 0.014493 0.304348 0.000000 0.000000 0.000000 0.000000 0.000000 0.072464 0.000000 0.000000 0.000000 0.014493 0.014493 0.000000 0.000000 0.000000 0.000000 0.014493 0.086957 0.217391 0.579710 0.000000 0.000000 0.000000 0.086957 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.028986 0.000000 0.637681 0.028986 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.217391 0.000000 0.000000 0.550725 0.000000 0.000000 0.000000 0.000000 0.231884 0.000000 0.101449 0.000000 0.000000 0.101449 0.000000 0.000000 0.000000 0.014493 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014493 0.000000 0.000000 0.492754 0.000000 0.304348 0.014493 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.173913 0.000000 0.000000 0.000000 0.000000 0.492754 0.086957 0.000000 0.000000 0.014493 0.000000 0.115942 0.000000 0.000000 0.014493 0.000000 0.000000 0.275362 0.000000 0.000000 0.000000 0.000000 0.000000 0.043478 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014493 0.072464 0.000000 0.000000 0.014493 0.362319 0.014493 0.000000 0.478261 0.000000 0.000000 0.014493 0.000000 0.202899 0.072464 0.014493 0.028986 0.014493 0.000000 0.000000 0.014493 0.000000 0.173913 0.000000 0.000000 0.014493 0.028986 0.362319 0.057971 0.000000 0.000000 0.000000 0.000000 0.086957 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.869565 0.000000 0.000000 0.000000 0.028986 0.014493 0.000000 0.000000 0.000000 0.144928 0.000000 0.000000 0.000000 0.014493 0.000000 0.000000 0.028986 0.000000 0.579710 0.014493 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.217391 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.028986 0.000000 0.971014 0.014493 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.144928 0.000000 0.159420 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.681159 0.000000 0.000000 0.028986 0.000000 0.000000 0.057971 0.000000 0.000000 0.000000 0.000000 0.000000 0.028986 0.231884 0.000000 0.000000 0.000000 0.014493 0.000000 0.072464 0.565217 0.000000 0.000000 0.449275 0.000000 0.000000 0.000000 0.000000 0.550725 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014493 0.000000 0.000000 0.304348 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.681159 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ITLAJDVTNLYVVGY MEME-2 regular expression -------------------------------------------------------------------------------- [IV][TS][LV][AG][IL][DR][VR][TD]N[LV]YV[VM][GA][YF] -------------------------------------------------------------------------------- Time 20.67 secs. ******************************************************************************** ******************************************************************************** MOTIF LENNWGKJSKAI MEME-3 width = 12 sites = 68 llr = 1350 E-value = 1.2e-288 ******************************************************************************** -------------------------------------------------------------------------------- Motif LENNWGKJSKAI MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::::1:::41 pos.-specific C :::::::::::: probability D :::::1:::::: matrix E :711::::::1: F 1::::::::::: G :::::4::::1: H :::::::::::: I :::::::4:::6 K ::11::3::3:: L 6:1::::5:1:1 M 1::::::1:::: N ::44::1::::: P :::::::::::: Q 111::::1::3: R ::::::2::1:: S :::2:31:a1:: T :111:::::3:: V :11:::::::12 W ::::a::::::: Y :::::::::::: bits 6.5 * 5.8 * 5.2 * 4.5 * Relative 3.9 * * Entropy 3.2 * * * (28.6 bits) 2.6 ** * * * 1.9 ** * ** ** 1.3 ************ 0.6 ************ 0.0 ------------ Multilevel LENNWGKLSKAI consensus S SRI TQ sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LENNWGKJSKAI MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ Q5F0I3|reviewed|Ribosome 214 3.47e-14 TFKPDQAIIS LENNWGALSKQI QKAQDRGGVF P84531|reviewed|Ribosome 186 1.09e-13 KFKPSQTIIS LENNWSALSKQI QIAKNKNGQF P33185|reviewed|Ribosome 211 1.09e-13 TFLPSLATIS LENNWSALSKQI QIASTNNGQF P84853|reviewed|Ribosome 203 1.38e-13 DFSPNDKILD LEENWGKISTAI HDATNGALPK P23339|reviewed|Antivira 203 1.38e-13 DFSPNDKVLD LEENWGKISTAI HNSKNGALPK P56626|reviewed|Type 205 2.95e-13 NFYPNQAVIS LENKWGALSKQI QIANRTGHGQ P06750|reviewed|Agglutin 230 3.70e-13 RSAPDPSVIT LENSWGRLSTAI QESNQGAFAS P02879|reviewed|Ricin|ta 242 3.70e-13 RSAPDPSVIT LENSWGRLSTAI QESNQGAFAS P24478|reviewed|Ribosome 211 6.06e-13 TFLPSLAIIS LENSWSALSKQI QIASTNNGQF P09989|reviewed|Ribosome 211 6.06e-13 TFLPSLAIIS LENSWSALSKQI QIASTNNGQF Q03464|reviewed|Antivira 227 7.34e-13 AFYPNAKVLN LEESWGKISTAI HNAKNGALTS Q00465|reviewed|Ribosome 207 1.40e-12 NQVPSLATIS LENEWSALSKQI QLAQTNNGTF P84530|reviewed|Ribosome 187 1.40e-12 NGVPSLATIS LENEWSALSKQI QLAQTNNGTF P33186|reviewed|Ribosome 240 1.70e-12 RIRPANNTIS LENKWGKLSFQI RTSGANGMFS P29339|reviewed|Ribosome 209 3.09e-12 NFKPNLAIIS LENQWSALSKQI FLAQNQGGKF P24817|reviewed|Ribosome 209 3.09e-12 NFKPNLAIIS LENQWSALSKQI FLAQNQGGKF P84854|reviewed|Ribosome 203 3.73e-12 AFNPNPKVLS LEENWGKISLAI HNAKNGALTS Q6EH50|reviewed|Heterote 225 6.47e-12 AFNPNPKVLN LEETWGKISTAI HDAKNGVLPK P16094|reviewed|Ribosome 211 1.53e-11 DEVPSLATIS LENSWSGLSKQI QLAQGNNGIF Q9FRX4|reviewed|Putative 213 2.13e-11 SKVPDLAAIS LENEWSLLSKQI QIAKSNNGQF Q7M1Z2|reviewed|Ribosome 204 3.43e-11 KFNSENKVIK FEVNWKKISTAI HGDAKNGVFN Q41391|reviewed|Ribosome 204 3.43e-11 KFNSENKVIQ FEVNWKKISTAI YGDAKNGVFN P20656|reviewed|Ribosome 228 3.43e-11 KFNSENKVIQ FEVNWKKISTAI YGDAKNGVFN P21326|reviewed|Antivira 224 4.66e-11 EVTVDEYMTA LENNWAKLSTAV YNSKPSTTTA Q7M1L6|reviewed|rRNA 205 5.42e-11 KFDSDNKVIQ FEVSWGKISRAI YGDCKNGVFN P34967|reviewed|Protein 207 5.42e-11 AFYPNAKVLN LEETWGKISMAI HGAKNGAFSK C0HM39|reviewed|rRNA 205 5.42e-11 KFDSDNKVIQ FEVSWGKISRAI YGDCKNGVFN P85101|reviewed|Ribosome 199 6.28e-11 SFEAGARITL LENNWSKISEQY HKSCKLGGGQ Q41358|reviewed|Ribosome 229 9.69e-11 EFTPDLLMLS MENNWSSMSSEI QQAQPGGIFA P27560|reviewed|Ribosome 176 9.69e-11 KFNSEDKVIQ FQVNWSKISKAI YGDAKNGVFN O22415|reviewed|Ribosome 229 9.69e-11 EFTPDLLMLS MENNWSSMSSEI QQAQPGGIFP P85208|reviewed|Dioicin- 206 1.28e-10 GYKPDPKAIS LETSWDKISNAI AKVNTPGNSI P10297|reviewed|Antivira 226 1.69e-10 AFNPNPKVLN LQETWGKISTAI HDAKNGVLPK Q41389|reviewed|Ribosome 204 1.93e-10 KFDSDNKVIQ FEVSWRKISTAI YGDAKNGVFN P27559|reviewed|Ribosome 228 1.93e-10 KFDSDNKVIQ FEVSWRKISTAI YGDAKNGVFN Q6H266|reviewed|Beta-gal 228 2.52e-10 SFLPDVYMLE LETSWGRQSTQV QQSTDGVFNN P33183|reviewed|Nigrin 218 2.52e-10 SFTPNALMLS MENNWSSMSLEI QQAGNNVSPF P93543|reviewed|Ribosome 231 2.87e-10 EFTPDLLMLS MENKWSSMSSEI QQAQPGGAFA P24476|reviewed|Ribosome 228 4.20e-10 KFDSENKVIQ FQVSWSKISTAI FGDCKNGVFN Q6ITZ3|reviewed|Beta-gal 189 7.73e-10 SFLPDVYMLE LETSWGQQSTQV QQSTEGVFNN P82683|reviewed|Beta-gal 228 7.73e-10 SFLPDMYMLE LETSWGQQSTQV QQSTDGVFNN P81446|reviewed|Beta-gal 228 7.73e-10 SFLPDVYMLE LETSWGQQSTQV QQSTDGVFNN Q9M654|reviewed|Ribosome 241 8.70e-10 TFTPGSLMIT MEKKWSKMSQQV ERSVNDQGIF U3KRF8|reviewed|Seed 193 9.79e-10 TFLPDLAIVS LEDNWSEISLQI QASTSLQGLF P11140|reviewed|Abrin-a| 194 9.79e-10 AFQPDAAMIS LENNWDNLSRGV QESVQDTFPN P98184|reviewed|Ribosome 211 1.38e-09 KFKPDPAFLS LQNAWGSLSEQI QIAQTRGGEF Q06077|reviewed|Abrin-b| 193 1.55e-09 AFQPDAAMIS LENNWDNLSGGV QQSVQDTFPN Q06076|reviewed|Abrin-d| 194 1.55e-09 AFQPDPAMLS LENNWDNLSGGV QQSVQDAFPN P28590|reviewed|Abrin-c| 228 1.55e-09 AFQPDPAMLS LENNWDNLSGGV QQSVQDTFPN Q40772|reviewed|Antivira 227 2.40e-09 GYQPDPKAIS LEKNWDSVSKVI AKVGTSGDST Q9FBI2|reviewed|Shiga 221 1.00e-08 SYVMTAEDVD LTLNWGRLSSVL PDYHGQDSVR Q779K4|reviewed|Shiga 221 1.00e-08 SYVMTAEDVD LTLNWGRLSSVL PDYHGQDSVR Q32GM1|reviewed|Shiga 221 1.00e-08 SYVMTAEDVD LTLNWGRLSSVL PDYHGQDSVR P10149|reviewed|Shiga-li 221 1.00e-08 SYVMTAEDVD LTLNWGRLSSVL PDYHGQDSVR P08026|reviewed|Shiga-li 221 1.00e-08 SYVMTAEDVD LTLNWGRLSSVL PDYHGQDSVR Q9M6E9|reviewed|Agglutin 213 1.10e-08 AFQPDPSMLS LENTWEPLSRAV QHTVQDTFPQ P28522|reviewed|Ribosome 237 1.60e-08 GVTLTVTQGK QVQKWDRISKAA FEWADHPTAV P25892|reviewed|Ribosome 238 1.60e-08 GVTLTVTQGK QVQKWDRISKAA FEWADHPTAV P25891|reviewed|Ribosome 237 1.60e-08 GVTLTVTQGK QVQKWDRISKAA FEWADHPTAV P10593|reviewed|Albumin 237 1.60e-08 GVTLTVTQGK QVQKWDRISKAA FEWADHPTAV P09385|reviewed|Shiga-li 220 2.11e-08 VYTMTPGDVD LTLNWGRISNVL PEYRGEDGVR Q9M653|reviewed|Ribosome 242 2.31e-08 TFRPDGLMLS MENEWPSMSLEV QRSIEGGIFI P84786|reviewed|Ribosome 198 4.25e-08 VKLPQWMQND LEKNWVRFSFMI LKSNADPCYK P22851|reviewed|Ribosome 189 1.79e-07 EVPSPAALSL ENEAWSLLSKQI QLAQTNNGAF P22244|reviewed|Protein 209 2.60e-07 SGKIGNEMKA QVNGWQDLSAAL LKTDVKPPPG P04399|reviewed|Protein 208 2.60e-07 SGKIGNEMKA QVNGWQDLSAAL LKTDVKPPPG Q00531|reviewed|60 230 2.80e-07 KVSVTPDEVN YIKEWGDLSTAL LSWMDKQYKD Q70US9|reviewed|Volkensi 195 2.09e-06 TFRPDALMYS IVTQWQTLSERI QGSFNGAFQP -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LENNWGKJSKAI MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- Q5F0I3|reviewed|Ribosome 3.5e-14 213_[3]_75 P84531|reviewed|Ribosome 1.1e-13 185_[3]_47 P33185|reviewed|Ribosome 1.1e-13 210_[3]_68 P84853|reviewed|Ribosome 1.4e-13 202_[3]_47 P23339|reviewed|Antivira 1.4e-13 202_[3]_47 P56626|reviewed|Type 2.9e-13 204_[3]_78 P06750|reviewed|Agglutin 3.7e-13 229_[3]_323 P02879|reviewed|Ricin|ta 3.7e-13 241_[3]_323 P24478|reviewed|Ribosome 6.1e-13 210_[3]_67 P09989|reviewed|Ribosome 6.1e-13 210_[3]_67 Q03464|reviewed|Antivira 7.3e-13 226_[3]_56 Q00465|reviewed|Ribosome 1.4e-12 206_[3]_59 P84530|reviewed|Ribosome 1.4e-12 186_[3]_43 P33186|reviewed|Ribosome 1.7e-12 239_[3]_65 P29339|reviewed|Ribosome 3.1e-12 208_[3]_66 P24817|reviewed|Ribosome 3.1e-12 208_[3]_66 P84854|reviewed|Ribosome 3.7e-12 202_[3]_47 Q6EH50|reviewed|Heterote 6.5e-12 224_[3]_76 P16094|reviewed|Ribosome 1.5e-11 210_[3]_64 Q9FRX4|reviewed|Putative 2.1e-11 212_[3]_62 Q7M1Z2|reviewed|Ribosome 3.4e-11 203_[3]_38 Q41391|reviewed|Ribosome 3.4e-11 203_[3]_38 P20656|reviewed|Ribosome 3.4e-11 227_[3]_60 P21326|reviewed|Antivira 4.7e-11 223_[3]_43 Q7M1L6|reviewed|rRNA 5.4e-11 204_[3]_38 P34967|reviewed|Protein 5.4e-11 206_[3]_47 C0HM39|reviewed|rRNA 5.4e-11 204_[3]_38 P85101|reviewed|Ribosome 6.3e-11 198_[3]_24 Q41358|reviewed|Ribosome 9.7e-11 228_[3]_330 P27560|reviewed|Ribosome 9.7e-11 175_[3]_49 O22415|reviewed|Ribosome 9.7e-11 228_[3]_330 P85208|reviewed|Dioicin- 1.3e-10 205_[3]_49 P10297|reviewed|Antivira 1.7e-10 225_[3]_76 Q41389|reviewed|Ribosome 1.9e-10 203_[3]_38 P27559|reviewed|Ribosome 1.9e-10 227_[3]_53 Q6H266|reviewed|Beta-gal 2.5e-10 227_[3]_328 P33183|reviewed|Nigrin 2.5e-10 217_[3]_334 P93543|reviewed|Ribosome 2.9e-10 230_[3]_327 P24476|reviewed|Ribosome 4.2e-10 227_[3]_54 Q6ITZ3|reviewed|Beta-gal 7.7e-10 188_[3]_320 P82683|reviewed|Beta-gal 7.7e-10 227_[3]_330 P81446|reviewed|Beta-gal 7.7e-10 227_[3]_325 Q9M654|reviewed|Ribosome 8.7e-10 240_[3]_352 U3KRF8|reviewed|Seed 9.8e-10 192_[3]_315 P11140|reviewed|Abrin-a| 9.8e-10 193_[3]_323 P98184|reviewed|Ribosome 1.4e-09 210_[3]_60 Q06077|reviewed|Abrin-b| 1.5e-09 192_[3]_323 Q06076|reviewed|Abrin-d| 1.5e-09 193_[3]_323 P28590|reviewed|Abrin-c| 1.5e-09 227_[3]_323 Q40772|reviewed|Antivira 2.4e-09 226_[3]_72 Q9FBI2|reviewed|Shiga 1e-08 220_[3]_83 Q779K4|reviewed|Shiga 1e-08 220_[3]_83 Q32GM1|reviewed|Shiga 1e-08 220_[3]_83 P10149|reviewed|Shiga-li 1e-08 220_[3]_83 P08026|reviewed|Shiga-li 1e-08 220_[3]_83 Q9M6E9|reviewed|Agglutin 1.1e-08 212_[3]_323 P28522|reviewed|Ribosome 1.6e-08 236_[3]_53 P25892|reviewed|Ribosome 1.6e-08 237_[3]_55 P25891|reviewed|Ribosome 1.6e-08 236_[3]_52 P10593|reviewed|Albumin 1.6e-08 236_[3]_55 P09385|reviewed|Shiga-li 2.1e-08 219_[3]_88 Q9M653|reviewed|Ribosome 2.3e-08 241_[3]_350 P84786|reviewed|Ribosome 4.2e-08 197_[3]_48 P22851|reviewed|Ribosome 1.8e-07 188_[3]_50 P22244|reviewed|Protein 2.6e-07 208_[3]_61 P04399|reviewed|Protein 2.6e-07 207_[3]_61 Q00531|reviewed|60 2.8e-07 229_[3]_319 Q70US9|reviewed|Volkensi 2.1e-06 194_[3]_317 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LENNWGKJSKAI MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF LENNWGKJSKAI width=12 seqs=68 Q5F0I3|reviewed|Ribosome ( 214) LENNWGALSKQI 1 P84531|reviewed|Ribosome ( 186) LENNWSALSKQI 1 P33185|reviewed|Ribosome ( 211) LENNWSALSKQI 1 P84853|reviewed|Ribosome ( 203) LEENWGKISTAI 1 P23339|reviewed|Antivira ( 203) LEENWGKISTAI 1 P56626|reviewed|Type ( 205) LENKWGALSKQI 1 P06750|reviewed|Agglutin ( 230) LENSWGRLSTAI 1 P02879|reviewed|Ricin|ta ( 242) LENSWGRLSTAI 1 P24478|reviewed|Ribosome ( 211) LENSWSALSKQI 1 P09989|reviewed|Ribosome ( 211) LENSWSALSKQI 1 Q03464|reviewed|Antivira ( 227) LEESWGKISTAI 1 Q00465|reviewed|Ribosome ( 207) LENEWSALSKQI 1 P84530|reviewed|Ribosome ( 187) LENEWSALSKQI 1 P33186|reviewed|Ribosome ( 240) LENKWGKLSFQI 1 P29339|reviewed|Ribosome ( 209) LENQWSALSKQI 1 P24817|reviewed|Ribosome ( 209) LENQWSALSKQI 1 P84854|reviewed|Ribosome ( 203) LEENWGKISLAI 1 Q6EH50|reviewed|Heterote ( 225) LEETWGKISTAI 1 P16094|reviewed|Ribosome ( 211) LENSWSGLSKQI 1 Q9FRX4|reviewed|Putative ( 213) LENEWSLLSKQI 1 Q7M1Z2|reviewed|Ribosome ( 204) FEVNWKKISTAI 1 Q41391|reviewed|Ribosome ( 204) FEVNWKKISTAI 1 P20656|reviewed|Ribosome ( 228) FEVNWKKISTAI 1 P21326|reviewed|Antivira ( 224) LENNWAKLSTAV 1 Q7M1L6|reviewed|rRNA ( 205) FEVSWGKISRAI 1 P34967|reviewed|Protein ( 207) LEETWGKISMAI 1 C0HM39|reviewed|rRNA ( 205) FEVSWGKISRAI 1 P85101|reviewed|Ribosome ( 199) LENNWSKISEQY 1 Q41358|reviewed|Ribosome ( 229) MENNWSSMSSEI 1 P27560|reviewed|Ribosome ( 176) FQVNWSKISKAI 1 O22415|reviewed|Ribosome ( 229) MENNWSSMSSEI 1 P85208|reviewed|Dioicin- ( 206) LETSWDKISNAI 1 P10297|reviewed|Antivira ( 226) LQETWGKISTAI 1 Q41389|reviewed|Ribosome ( 204) FEVSWRKISTAI 1 P27559|reviewed|Ribosome ( 228) FEVSWRKISTAI 1 Q6H266|reviewed|Beta-gal ( 228) LETSWGRQSTQV 1 P33183|reviewed|Nigrin ( 218) MENNWSSMSLEI 1 P93543|reviewed|Ribosome ( 231) MENKWSSMSSEI 1 P24476|reviewed|Ribosome ( 228) FQVSWSKISTAI 1 Q6ITZ3|reviewed|Beta-gal ( 189) LETSWGQQSTQV 1 P82683|reviewed|Beta-gal ( 228) LETSWGQQSTQV 1 P81446|reviewed|Beta-gal ( 228) LETSWGQQSTQV 1 Q9M654|reviewed|Ribosome ( 241) MEKKWSKMSQQV 1 U3KRF8|reviewed|Seed ( 193) LEDNWSEISLQI 1 P11140|reviewed|Abrin-a| ( 194) LENNWDNLSRGV 1 P98184|reviewed|Ribosome ( 211) LQNAWGSLSEQI 1 Q06077|reviewed|Abrin-b| ( 193) LENNWDNLSGGV 1 Q06076|reviewed|Abrin-d| ( 194) LENNWDNLSGGV 1 P28590|reviewed|Abrin-c| ( 228) LENNWDNLSGGV 1 Q40772|reviewed|Antivira ( 227) LEKNWDSVSKVI 1 Q9FBI2|reviewed|Shiga ( 221) LTLNWGRLSSVL 1 Q779K4|reviewed|Shiga ( 221) LTLNWGRLSSVL 1 Q32GM1|reviewed|Shiga ( 221) LTLNWGRLSSVL 1 P10149|reviewed|Shiga-li ( 221) LTLNWGRLSSVL 1 P08026|reviewed|Shiga-li ( 221) LTLNWGRLSSVL 1 Q9M6E9|reviewed|Agglutin ( 213) LENTWEPLSRAV 1 P28522|reviewed|Ribosome ( 237) QVQKWDRISKAA 1 P25892|reviewed|Ribosome ( 238) QVQKWDRISKAA 1 P25891|reviewed|Ribosome ( 237) QVQKWDRISKAA 1 P10593|reviewed|Albumin ( 237) QVQKWDRISKAA 1 P09385|reviewed|Shiga-li ( 220) LTLNWGRISNVL 1 Q9M653|reviewed|Ribosome ( 242) MENEWPSMSLEV 1 P84786|reviewed|Ribosome ( 198) LEKNWVRFSFMI 1 P22851|reviewed|Ribosome ( 189) ENEAWSLLSKQI 1 P22244|reviewed|Protein ( 209) QVNGWQDLSAAL 1 P04399|reviewed|Protein ( 208) QVNGWQDLSAAL 1 Q00531|reviewed|60 ( 230) YIKEWGDLSTAL 1 Q70US9|reviewed|Volkensi ( 195) IVTQWQTLSERI 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LENNWGKJSKAI MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 12 n= 24109 bayes= 8.53548 E= 1.2e-288 -464 -366 -610 -180 136 -603 -369 -155 -483 292 188 -596 -492 70 -477 -538 -483 -314 -440 -157 -466 -770 -277 402 -795 -592 -425 -215 -393 -655 -561 -203 -535 51 -555 -547 16 41 -803 -721 -367 -488 -136 150 -544 -454 -240 -538 40 -10 -401 271 -440 52 -352 -376 17 75 -556 -493 -123 -490 -305 79 -565 -107 -238 -584 131 -549 -446 265 -464 12 -385 150 -37 -541 -580 -505 -952 -779 -885 -927 -818 -820 -730 -1034 -920 -909 -928 -964 -825 -918 -896 -959 -971 -1002 616 -834 -180 -423 142 -84 -477 242 -182 -483 12 -449 -342 -326 -130 18 -68 177 -355 -215 -490 -429 90 -409 -18 -82 -461 -192 -169 -467 262 -155 -325 -8 -129 19 184 34 -191 -425 -474 -414 -688 -566 -962 -841 -127 -881 -646 243 -837 238 213 -919 -781 45 -808 -869 -715 -212 -589 -631 -836 -758 -896 -948 -934 -800 -747 -1067 -944 -975 -983 -970 -822 -936 -916 364 -933 -1003 -864 -937 -108 -409 -300 23 -54 -58 -169 -467 248 -66 -41 -93 -379 -95 17 52 175 -425 -474 -414 239 -458 -370 88 -582 -17 -325 -541 -307 -532 -44 -479 -503 289 -162 -433 -468 43 -601 -561 -86 -342 -511 -464 -359 -551 -404 331 -442 32 -152 -517 -523 -490 -510 -478 -413 116 -471 -174 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LENNWGKJSKAI MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 12 nsites= 68 E= 1.2e-288 0.000000 0.000000 0.000000 0.014706 0.132353 0.000000 0.000000 0.014706 0.000000 0.647059 0.088235 0.000000 0.000000 0.088235 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.000000 0.720588 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.000000 0.014706 0.000000 0.058824 0.000000 0.000000 0.088235 0.102941 0.000000 0.000000 0.000000 0.000000 0.014706 0.117647 0.000000 0.000000 0.000000 0.000000 0.058824 0.088235 0.000000 0.441176 0.000000 0.058824 0.000000 0.000000 0.088235 0.132353 0.000000 0.000000 0.029412 0.000000 0.000000 0.073529 0.000000 0.029412 0.000000 0.000000 0.117647 0.000000 0.000000 0.411765 0.000000 0.044118 0.000000 0.235294 0.058824 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.014706 0.000000 0.147059 0.014706 0.000000 0.382353 0.000000 0.000000 0.044118 0.000000 0.000000 0.000000 0.014706 0.044118 0.029412 0.294118 0.000000 0.014706 0.000000 0.000000 0.147059 0.000000 0.044118 0.014706 0.000000 0.014706 0.000000 0.000000 0.308824 0.029412 0.000000 0.058824 0.014706 0.044118 0.205882 0.102941 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.352941 0.000000 0.470588 0.088235 0.000000 0.000000 0.058824 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.029412 0.000000 0.000000 0.044118 0.029412 0.044118 0.000000 0.000000 0.279412 0.058824 0.014706 0.029412 0.000000 0.014706 0.058824 0.117647 0.279412 0.000000 0.000000 0.000000 0.411765 0.000000 0.000000 0.073529 0.000000 0.058824 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.323529 0.014706 0.000000 0.000000 0.102941 0.000000 0.000000 0.058824 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.617647 0.000000 0.132353 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.176471 0.000000 0.014706 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LENNWGKJSKAI MEME-3 regular expression -------------------------------------------------------------------------------- LEN[NS]W[GS][KR][LI]S[KT][AQ]I -------------------------------------------------------------------------------- Time 29.96 secs. ******************************************************************************** ******************************************************************************** MOTIF LPYTGNYQSLERAAG MEME-4 width = 15 sites = 68 llr = 1497 E-value = 2.3e-315 ******************************************************************************** -------------------------------------------------------------------------------- Motif LPYTGNYQSLERAAG MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::::::::::::27: pos.-specific C ::::::::::::::: probability D :::2:2:13:::::: matrix E :1::1::2::6:::: F ::4:::::::::::: G :1126::1:::1:16 H ::::::::::::::1 I 2::::::::1::::: K ::::::::1::221: L 7::::::::8::::: M ::::::::::::::: N :1:1:3::1::12:: P :3:::::1::::::: Q :::::::2::3:::1 R :::::1::1::3::: S :1:123::3::1::: T :::3:1:12::1::: V ::::::::::::11: W ::::::::::::1:: Y ::5:::a:::::1:: bits 6.5 5.8 5.2 4.5 * Relative 3.9 * Entropy 3.2 * * (31.8 bits) 2.6 * * * * ** * 1.9 * * * * ** ** 1.3 *************** 0.6 *************** 0.0 --------------- Multilevel LPYTGNYQSLERAAG consensus FDSS D Q N sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LPYTGNYQSLERAAG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- Q9M6E9|reviewed|Agglutin 126 1.13e-16 YLFTGTQQYS LPFDGNYDDLEKWAH QSRQRISLGL P82683|reviewed|Beta-gal 142 3.22e-15 HLFTGTTRSS LPFTGSYTDLERYAG HRDQIPLGIE P81446|reviewed|Beta-gal 142 4.95e-15 HLFTGTTRSS LPFNGSYPDLERYAG HRDQIPLGID Q6ITZ3|reviewed|Beta-gal 104 8.14e-14 HLFTGTTRSS LPFNGSYPDLEQYAG HRKQIPLGID P33185|reviewed|Ribosome 128 1.13e-13 VFKDAKKKVT LPYSGNYERLQTAAG KIRENIPLGL P29339|reviewed|Ribosome 126 1.13e-13 ILFKGTRKIT LPYTGNYENLQTAAH KIRENIDLGL P24817|reviewed|Ribosome 126 1.13e-13 ILFKGTRKIT LPYTGNYENLQTAAH KIRENIDLGL P09989|reviewed|Ribosome 128 1.13e-13 VFKDAMRKVT LPYSGNYERLQTAAG KIRENIPLGL Q06076|reviewed|Abrin-d| 107 1.82e-13 YLFPGTQRYS LRFDGSYGDLERWAH QTREEISLGL Q00465|reviewed|Ribosome 124 1.82e-13 YVFKGSTIVT LPYSGNYEKLQTAAG KIREKIPLGF P84530|reviewed|Ribosome 104 1.82e-13 YVFAGSTIVT LPYSGNYEKLQTAAG KIREKIPLGF P28590|reviewed|Abrin-c| 141 1.82e-13 YLFPGTQRYS LRFDGSYGDLERWAH QTREEISLGL P98184|reviewed|Ribosome 126 2.88e-13 VLFAGINHVR LPYGGNYDGLETAAG RISRENIELG Q6H266|reviewed|Beta-gal 142 3.87e-13 HLFTGTTRSS LPFNGSYADLERYAG HRDRIPLGRE Q9M654|reviewed|Ribosome 155 7.89e-13 LFVGIPRGDP LGFTGNYNSLENWAG ADRGSIPLGP P24478|reviewed|Ribosome 128 7.89e-13 VFKDAKRKVT LPYSGNYERLQIAAG KIRENIPLGL P22851|reviewed|Ribosome 105 7.89e-13 YVFKGSTLVT IPYSGNYERLQNAAG KIREKIPLGF P16094|reviewed|Ribosome 128 7.89e-13 VFRDARRKIT LPYSGNYERLQIAAG KPREKIPIGL P11140|reviewed|Abrin-a| 107 1.36e-12 YLFTGTDQHS LPFYGTYGDLERWAH QSRQQIPLGL Q41391|reviewed|Ribosome 114 1.55e-12 PEATTANQKA LEYTEDYQSIEKNAQ ITQGDKSRKE Q41389|reviewed|Ribosome 114 1.55e-12 PEATTANQKA LEYTEDYQSIEKNAQ ITQGDKSRKE P27561|reviewed|Ribosome 138 1.55e-12 PEATTANQKA LEYTEDYQSIEKNAQ ITQED P27559|reviewed|Ribosome 138 1.55e-12 PEATTANQKA LEYTEDYQSIEKNAQ ITQGDKSRKE P20656|reviewed|Ribosome 138 1.55e-12 PEATTANQKA LEYTEDYQSIEKNAQ ITQGDQSRKE P84531|reviewed|Ribosome 103 2.01e-12 LLFKGTQQRT LPYTGNYENLQTAAK KLRENIELGL Q41358|reviewed|Ribosome 139 2.59e-12 NLFVDTTQEE LNFTGNYTSLERQVG FGRVYIPLGP P27560|reviewed|Ribosome 86 6.10e-12 PEATVANQKA LEYTEDYQSIEKNAK ITEGDKTRKE Q7M1Z2|reviewed|Ribosome 114 6.87e-12 PEATAANHKA LEYTEDYHSIEKNAQ ITEGDKSRKE Q9M653|reviewed|Ribosome 149 7.72e-12 NLFSGMLTIR LSFTSNYVSLEHKAG VGRENISLGP P23339|reviewed|Antivira 116 1.36e-11 PSSNPRVAKP INYNGLYPTLEKKAG VTSRNEVQLG O22415|reviewed|Ribosome 139 1.36e-11 NLFVDTTQEE LNFTGNYISLERQVG FGRVYIPLGP Q9FRX4|reviewed|Putative 130 1.70e-11 FVFQGTKSIT LPYSGNYQKLQSVAR KERDSIPLGF P34967|reviewed|Protein 121 1.90e-11 PNASSRVSKN ISYDSSYPALENKAG RSRSQVQLGI P21326|reviewed|Antivira 140 1.90e-11 PGATGTNRIK LTFTGSYGDLEKNGG LRKDNPLGIF P10297|reviewed|Antivira 139 1.90e-11 PNANSRVSKN INFDSRYPTLESKAG VKSRSQVQLG P56626|reviewed|Type 122 2.36e-11 LIFAGTKTVK LPYSGNYDKLQSVVG KQRDMIELGI Q7M1L6|reviewed|rRNA 115 2.92e-11 PEATAANQIV IQYGEDYQSIERNAQ ITQGSQSRKE C0HM39|reviewed|rRNA 115 2.92e-11 PEATATNQIV IQYGEDYQSIERNAQ ITQGSQSRKE P33183|reviewed|Nigrin 135 3.60e-11 NLFVGTKQNT LSFTGNYDNLETAAN TRRESIELGP P24476|reviewed|Ribosome 138 4.43e-11 PEVVVANQKQ LEYGEDYQAIEKNAK ITTGDQSRKE Q9FBI2|reviewed|Shiga 130 5.43e-11 VTFPGTTAVT LSGDSSYTTLQRVAG ISRTGMQINR Q779K4|reviewed|Shiga 130 5.43e-11 VTFPGTTAVT LSGDSSYTTLQRVAG ISRTGMQINR Q32GM1|reviewed|Shiga 130 5.43e-11 VTFPGTTAVT LSGDSSYTTLQRVAG ISRTGMQINR Q03464|reviewed|Antivira 141 5.43e-11 PNPSSRVGKN INYDSSYPALEKKVG RPRSQVQLGI P10149|reviewed|Shiga-li 130 5.43e-11 VTFPGTTAVT LSGDSSYTTLQRVAG ISRTGMQINR P08026|reviewed|Shiga-li 130 5.43e-11 VTFPGTTAVT LSGDSSYTTLQRVAG ISRTGMQINR P93543|reviewed|Ribosome 141 6.01e-11 NLFVDTTQED LNFKGDYTSLEHQVG FGRVYIPLGP Q6EH50|reviewed|Heterote 139 1.45e-10 PNSNSRVSKN INYDSRYPTLESKVG VKSRSQVQLG P28522|reviewed|Ribosome 124 1.59e-10 THLLGDNPRW LGFGGRYQDLIGNKG LETVTMGRAE P25892|reviewed|Ribosome 124 1.59e-10 THLLGDNPRW LGFGGRYQDLIGNKG LETVTMGRAE P25891|reviewed|Ribosome 124 1.59e-10 THLLGDNPRW LGFGGRYQDLIGNKG LETVTMGRAE Q06077|reviewed|Abrin-b| 107 3.62e-10 YLFTGTQQYS LRFNGSYIDLERLAR QTRQQIPLGL P85101|reviewed|Ribosome 113 3.62e-10 FTDAEVLAPA LPCASTYTDLQNKAG VSREKLSLGV P33186|reviewed|Ribosome 153 4.72e-10 GLFKNTIKTR LHFGGSYPSLEGEKA YRETTDLGIE P02879|reviewed|Ricin|ta 152 4.72e-10 LFTDVQNRYT FAFGGNYDRLEQLAG NLRENIELGN P85208|reviewed|Dioicin- 115 7.28e-10 DLTLPGSQNK IPYKKSYQSMESKGG DRTKLGLGQI Q5F0I3|reviewed|Ribosome 130 1.11e-09 LLFPGSVREN LSYTGGYDDLERRGA GREDIPLGLL P84854|reviewed|Ribosome 116 1.20e-09 PNSNSREKKA INYNSQYSTLQNKAG VSSRSQVQLG P06750|reviewed|Agglutin 141 3.14e-09 LFTDVQNSFT FAFGGNYDRLEQLGG LRENIELGTG Q70US9|reviewed|Volkensi 107 4.28e-09 SVFPDAQRRQ LPFGGGYPSMRNYAP ERDQIDHGIV P84853|reviewed|Ribosome 116 4.28e-09 SSSSSRDAKP INYNSLYSTLEKKAE VNSRSQVQLG U3KRF8|reviewed|Seed 108 4.98e-09 TLFTDTHQNV LNFDNTFKSLENAAG TTRQTIVLGV Q40772|reviewed|Antivira 136 2.12e-08 DKSKPGTQNN IPYEKSYKGMESKGG ARTKLGLGKI P84786|reviewed|Ribosome 111 2.27e-08 TGHLIEGSEL LEFGPSYEELAAAAQ QDILDISYNK P09385|reviewed|Shiga-li 130 4.18e-08 ISVPGVTTVS MTTDSSYTTLQRVAA LERSGMQISR P22244|reviewed|Protein 112 7.50e-07 TPGLIPGATY VGFGGTYRDLLGDTD KLTNVALGRQ P04399|reviewed|Protein 111 7.50e-07 TPGLIPGATY VGFGGTYRDLLGDTD KLTNVALGRQ Q00531|reviewed|60 125 8.88e-07 YKLVDDKAVM AGFDGNYNTLVGGVN NLPTLNLNKF -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LPYTGNYQSLERAAG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- Q9M6E9|reviewed|Agglutin 1.1e-16 125_[4]_407 P82683|reviewed|Beta-gal 3.2e-15 141_[4]_413 P81446|reviewed|Beta-gal 4.9e-15 141_[4]_408 Q6ITZ3|reviewed|Beta-gal 8.1e-14 103_[4]_402 P33185|reviewed|Ribosome 1.1e-13 127_[4]_148 P29339|reviewed|Ribosome 1.1e-13 125_[4]_146 P24817|reviewed|Ribosome 1.1e-13 125_[4]_146 P09989|reviewed|Ribosome 1.1e-13 127_[4]_147 Q06076|reviewed|Abrin-d| 1.8e-13 106_[4]_407 Q00465|reviewed|Ribosome 1.8e-13 123_[4]_139 P84530|reviewed|Ribosome 1.8e-13 103_[4]_123 P28590|reviewed|Abrin-c| 1.8e-13 140_[4]_407 P98184|reviewed|Ribosome 2.9e-13 125_[4]_142 Q6H266|reviewed|Beta-gal 3.9e-13 141_[4]_411 Q9M654|reviewed|Ribosome 7.9e-13 154_[4]_435 P24478|reviewed|Ribosome 7.9e-13 127_[4]_147 P22851|reviewed|Ribosome 7.9e-13 104_[4]_131 P16094|reviewed|Ribosome 7.9e-13 127_[4]_144 P11140|reviewed|Abrin-a| 1.4e-12 106_[4]_407 Q41391|reviewed|Ribosome 1.5e-12 113_[4]_125 Q41389|reviewed|Ribosome 1.5e-12 113_[4]_125 P27561|reviewed|Ribosome 1.5e-12 137_[4]_5 P27559|reviewed|Ribosome 1.5e-12 137_[4]_140 P20656|reviewed|Ribosome 1.5e-12 137_[4]_147 P84531|reviewed|Ribosome 2e-12 102_[4]_127 Q41358|reviewed|Ribosome 2.6e-12 138_[4]_417 P27560|reviewed|Ribosome 6.1e-12 85_[4]_136 Q7M1Z2|reviewed|Ribosome 6.9e-12 113_[4]_125 Q9M653|reviewed|Ribosome 7.7e-12 148_[4]_440 P23339|reviewed|Antivira 1.4e-11 115_[4]_131 O22415|reviewed|Ribosome 1.4e-11 138_[4]_417 Q9FRX4|reviewed|Putative 1.7e-11 129_[4]_142 P34967|reviewed|Protein 1.9e-11 120_[4]_130 P21326|reviewed|Antivira 1.9e-11 139_[4]_124 P10297|reviewed|Antivira 1.9e-11 138_[4]_160 P56626|reviewed|Type 2.4e-11 121_[4]_158 Q7M1L6|reviewed|rRNA 2.9e-11 114_[4]_125 C0HM39|reviewed|rRNA 2.9e-11 114_[4]_125 P33183|reviewed|Nigrin 3.6e-11 134_[4]_414 P24476|reviewed|Ribosome 4.4e-11 137_[4]_141 Q9FBI2|reviewed|Shiga 5.4e-11 129_[4]_171 Q779K4|reviewed|Shiga 5.4e-11 129_[4]_171 Q32GM1|reviewed|Shiga 5.4e-11 129_[4]_171 Q03464|reviewed|Antivira 5.4e-11 140_[4]_139 P10149|reviewed|Shiga-li 5.4e-11 129_[4]_171 P08026|reviewed|Shiga-li 5.4e-11 129_[4]_171 P93543|reviewed|Ribosome 6e-11 140_[4]_414 Q6EH50|reviewed|Heterote 1.4e-10 138_[4]_159 P28522|reviewed|Ribosome 1.6e-10 123_[4]_163 P25892|reviewed|Ribosome 1.6e-10 123_[4]_166 P25891|reviewed|Ribosome 1.6e-10 123_[4]_162 Q06077|reviewed|Abrin-b| 3.6e-10 106_[4]_406 P85101|reviewed|Ribosome 3.6e-10 112_[4]_107 P33186|reviewed|Ribosome 4.7e-10 152_[4]_149 P02879|reviewed|Ricin|ta 4.7e-10 151_[4]_410 P85208|reviewed|Dioicin- 7.3e-10 114_[4]_137 Q5F0I3|reviewed|Ribosome 1.1e-09 129_[4]_156 P84854|reviewed|Ribosome 1.2e-09 115_[4]_131 P06750|reviewed|Agglutin 3.1e-09 140_[4]_409 Q70US9|reviewed|Volkensi 4.3e-09 106_[4]_402 P84853|reviewed|Ribosome 4.3e-09 115_[4]_131 U3KRF8|reviewed|Seed 5e-09 107_[4]_397 Q40772|reviewed|Antivira 2.1e-08 135_[4]_160 P84786|reviewed|Ribosome 2.3e-08 110_[4]_132 P09385|reviewed|Shiga-li 4.2e-08 129_[4]_175 P22244|reviewed|Protein 7.5e-07 111_[4]_155 P04399|reviewed|Protein 7.5e-07 110_[4]_155 Q00531|reviewed|60 8.9e-07 124_[4]_421 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LPYTGNYQSLERAAG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF LPYTGNYQSLERAAG width=15 seqs=68 Q9M6E9|reviewed|Agglutin ( 126) LPFDGNYDDLEKWAH 1 P82683|reviewed|Beta-gal ( 142) LPFTGSYTDLERYAG 1 P81446|reviewed|Beta-gal ( 142) LPFNGSYPDLERYAG 1 Q6ITZ3|reviewed|Beta-gal ( 104) LPFNGSYPDLEQYAG 1 P33185|reviewed|Ribosome ( 128) LPYSGNYERLQTAAG 1 P29339|reviewed|Ribosome ( 126) LPYTGNYENLQTAAH 1 P24817|reviewed|Ribosome ( 126) LPYTGNYENLQTAAH 1 P09989|reviewed|Ribosome ( 128) LPYSGNYERLQTAAG 1 Q06076|reviewed|Abrin-d| ( 107) LRFDGSYGDLERWAH 1 Q00465|reviewed|Ribosome ( 124) LPYSGNYEKLQTAAG 1 P84530|reviewed|Ribosome ( 104) LPYSGNYEKLQTAAG 1 P28590|reviewed|Abrin-c| ( 141) LRFDGSYGDLERWAH 1 P98184|reviewed|Ribosome ( 126) LPYGGNYDGLETAAG 1 Q6H266|reviewed|Beta-gal ( 142) LPFNGSYADLERYAG 1 Q9M654|reviewed|Ribosome ( 155) LGFTGNYNSLENWAG 1 P24478|reviewed|Ribosome ( 128) LPYSGNYERLQIAAG 1 P22851|reviewed|Ribosome ( 105) IPYSGNYERLQNAAG 1 P16094|reviewed|Ribosome ( 128) LPYSGNYERLQIAAG 1 P11140|reviewed|Abrin-a| ( 107) LPFYGTYGDLERWAH 1 Q41391|reviewed|Ribosome ( 114) LEYTEDYQSIEKNAQ 1 Q41389|reviewed|Ribosome ( 114) LEYTEDYQSIEKNAQ 1 P27561|reviewed|Ribosome ( 138) LEYTEDYQSIEKNAQ 1 P27559|reviewed|Ribosome ( 138) LEYTEDYQSIEKNAQ 1 P20656|reviewed|Ribosome ( 138) LEYTEDYQSIEKNAQ 1 P84531|reviewed|Ribosome ( 103) LPYTGNYENLQTAAK 1 Q41358|reviewed|Ribosome ( 139) LNFTGNYTSLERQVG 1 P27560|reviewed|Ribosome ( 86) LEYTEDYQSIEKNAK 1 Q7M1Z2|reviewed|Ribosome ( 114) LEYTEDYHSIEKNAQ 1 Q9M653|reviewed|Ribosome ( 149) LSFTSNYVSLEHKAG 1 P23339|reviewed|Antivira ( 116) INYNGLYPTLEKKAG 1 O22415|reviewed|Ribosome ( 139) LNFTGNYISLERQVG 1 Q9FRX4|reviewed|Putative ( 130) LPYSGNYQKLQSVAR 1 P34967|reviewed|Protein ( 121) ISYDSSYPALENKAG 1 P21326|reviewed|Antivira ( 140) LTFTGSYGDLEKNGG 1 P10297|reviewed|Antivira ( 139) INFDSRYPTLESKAG 1 P56626|reviewed|Type ( 122) LPYSGNYDKLQSVVG 1 Q7M1L6|reviewed|rRNA ( 115) IQYGEDYQSIERNAQ 1 C0HM39|reviewed|rRNA ( 115) IQYGEDYQSIERNAQ 1 P33183|reviewed|Nigrin ( 135) LSFTGNYDNLETAAN 1 P24476|reviewed|Ribosome ( 138) LEYGEDYQAIEKNAK 1 Q9FBI2|reviewed|Shiga ( 130) LSGDSSYTTLQRVAG 1 Q779K4|reviewed|Shiga ( 130) LSGDSSYTTLQRVAG 1 Q32GM1|reviewed|Shiga ( 130) LSGDSSYTTLQRVAG 1 Q03464|reviewed|Antivira ( 141) INYDSSYPALEKKVG 1 P10149|reviewed|Shiga-li ( 130) LSGDSSYTTLQRVAG 1 P08026|reviewed|Shiga-li ( 130) LSGDSSYTTLQRVAG 1 P93543|reviewed|Ribosome ( 141) LNFKGDYTSLEHQVG 1 Q6EH50|reviewed|Heterote ( 139) INYDSRYPTLESKVG 1 P28522|reviewed|Ribosome ( 124) LGFGGRYQDLIGNKG 1 P25892|reviewed|Ribosome ( 124) LGFGGRYQDLIGNKG 1 P25891|reviewed|Ribosome ( 124) LGFGGRYQDLIGNKG 1 Q06077|reviewed|Abrin-b| ( 107) LRFNGSYIDLERLAR 1 P85101|reviewed|Ribosome ( 113) LPCASTYTDLQNKAG 1 P33186|reviewed|Ribosome ( 153) LHFGGSYPSLEGEKA 1 P02879|reviewed|Ricin|ta ( 152) FAFGGNYDRLEQLAG 1 P85208|reviewed|Dioicin- ( 115) IPYKKSYQSMESKGG 1 Q5F0I3|reviewed|Ribosome ( 130) LSYTGGYDDLERRGA 1 P84854|reviewed|Ribosome ( 116) INYNSQYSTLQNKAG 1 P06750|reviewed|Agglutin ( 141) FAFGGNYDRLEQLGG 1 Q70US9|reviewed|Volkensi ( 107) LPFGGGYPSMRNYAP 1 P84853|reviewed|Ribosome ( 116) INYNSLYSTLEKKAE 1 U3KRF8|reviewed|Seed ( 108) LNFDNTFKSLENAAG 1 Q40772|reviewed|Antivira ( 136) IPYEKSYKGMESKGG 1 P84786|reviewed|Ribosome ( 111) LEFGPSYEELAAAAQ 1 P09385|reviewed|Shiga-li ( 130) MTTDSSYTTLQRVAA 1 P22244|reviewed|Protein ( 112) VGFGGTYRDLLGDTD 1 P04399|reviewed|Protein ( 111) VGFGGTYRDLLGDTD 1 Q00531|reviewed|60 ( 125) AGFDGNYNTLVGGVN 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LPYTGNYQSLERAAG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 15 n= 23902 bayes= 8.52301 E= 2.3e-315 -241 -396 -648 -523 -53 -639 -406 123 -521 304 -10 -634 -528 -479 -514 -576 -516 -127 -469 -488 -113 -428 -303 157 -485 58 53 -493 -218 -459 -353 115 299 -31 -21 68 -122 -451 -499 -437 -718 24 -802 -762 338 15 -322 -682 -730 -607 -579 -708 -746 -669 -706 -713 -237 -687 -358 365 -223 -568 207 -133 -690 163 -296 -760 -61 -724 -644 76 -551 -449 -532 72 175 -718 -713 -135 -519 -567 -310 172 -711 314 -312 -783 -64 -755 -676 -156 -140 -467 -553 132 -528 -733 -720 -620 -526 -571 164 -381 -694 -105 -298 -767 -426 -165 -653 234 -554 -139 43 184 -6 -725 -717 -604 -792 -608 -821 -787 -104 -799 -341 -702 -750 -625 -599 -727 -766 -687 -724 -757 -788 -712 -374 470 -175 -409 92 184 -461 -20 55 -116 -29 -433 -325 -93 163 220 -66 -116 86 -212 -474 -414 -71 -481 221 -109 -552 -107 -230 -569 39 -535 -431 -1 -454 -318 90 166 115 -527 -567 -494 -673 -552 -910 -787 -395 -856 -617 118 -785 315 118 -881 -746 -689 -761 -833 -698 -464 -580 -620 -215 -693 -285 373 -729 -589 -411 -60 -372 -163 -526 -548 -534 275 -179 -541 -560 -228 -749 -686 -183 -428 -325 -214 -485 57 139 -116 198 -452 -345 66 -401 18 221 13 73 -446 -492 -435 136 -409 -66 -82 -461 -192 -170 -466 174 -104 -325 160 -379 19 -137 -307 -341 56 224 86 327 -240 -578 -499 -527 8 -437 -517 15 -511 -408 -575 -547 -536 -542 -303 -138 35 -551 -592 -74 -452 -71 -113 -535 310 282 -547 -2 -518 -410 -96 -140 154 -80 -357 -413 -504 -532 -484 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LPYTGNYQSLERAAG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 15 nsites= 68 E= 2.3e-315 0.014706 0.000000 0.000000 0.000000 0.029412 0.000000 0.000000 0.176471 0.000000 0.735294 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.029412 0.000000 0.000000 0.029412 0.000000 0.000000 0.132353 0.000000 0.102941 0.014706 0.000000 0.000000 0.000000 0.000000 0.147059 0.338235 0.029412 0.044118 0.132353 0.029412 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.426471 0.073529 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.470588 0.014706 0.000000 0.220588 0.014706 0.000000 0.205882 0.000000 0.000000 0.029412 0.000000 0.000000 0.102941 0.000000 0.000000 0.000000 0.132353 0.264706 0.000000 0.000000 0.014706 0.000000 0.000000 0.000000 0.147059 0.000000 0.588235 0.000000 0.000000 0.029412 0.000000 0.000000 0.014706 0.014706 0.000000 0.000000 0.205882 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.161765 0.000000 0.000000 0.029412 0.000000 0.000000 0.000000 0.029412 0.000000 0.323529 0.000000 0.014706 0.073529 0.294118 0.073529 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.985294 0.014706 0.000000 0.102941 0.161765 0.000000 0.058824 0.014706 0.029412 0.029412 0.000000 0.000000 0.029412 0.132353 0.205882 0.029412 0.029412 0.147059 0.014706 0.000000 0.000000 0.044118 0.000000 0.250000 0.014706 0.000000 0.029412 0.000000 0.000000 0.058824 0.000000 0.000000 0.058824 0.000000 0.000000 0.102941 0.264706 0.176471 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.147059 0.000000 0.808824 0.044118 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.588235 0.000000 0.000000 0.000000 0.044118 0.000000 0.029412 0.000000 0.000000 0.000000 0.294118 0.014706 0.000000 0.000000 0.014706 0.000000 0.000000 0.014706 0.000000 0.000000 0.000000 0.000000 0.102941 0.029412 0.029412 0.191176 0.000000 0.000000 0.102941 0.000000 0.044118 0.264706 0.088235 0.132353 0.000000 0.000000 0.000000 0.205882 0.000000 0.029412 0.014706 0.000000 0.014706 0.000000 0.000000 0.161765 0.044118 0.000000 0.205882 0.000000 0.044118 0.014706 0.000000 0.000000 0.117647 0.073529 0.073529 0.735294 0.000000 0.000000 0.000000 0.000000 0.073529 0.000000 0.000000 0.058824 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.029412 0.102941 0.000000 0.000000 0.044118 0.000000 0.029412 0.014706 0.000000 0.573529 0.088235 0.000000 0.044118 0.000000 0.000000 0.029412 0.014706 0.132353 0.029412 0.000000 0.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif LPYTGNYQSLERAAG MEME-4 regular expression -------------------------------------------------------------------------------- LP[YF][TDG][GS][NS]YQ[SD]L[EQ]R[AN]AG -------------------------------------------------------------------------------- Time 38.83 secs. ******************************************************************************** ******************************************************************************** MOTIF YSSFIESLRNALKDP MEME-5 width = 15 sites = 68 llr = 1347 E-value = 5.1e-255 ******************************************************************************** -------------------------------------------------------------------------------- Motif YSSFIESLRNALKDP MEME-5 Description -------------------------------------------------------------------------------- Simplified A :11::12:::311:: pos.-specific C ::::::::::::::: probability D ::1::21::11::3: matrix E :::::2:::21:::1 F :1:9::::::::::: G :1::::::::::113 H ::::::::::::::1 I ::::6::3:::11:: K :11::11::21:211 L ::::3::6:::4::: M ::::1:::::::::: N ::1::11::31::1: P ::::::::::::2:3 Q ::1::::::1::::: R ::1::1::a:1:1:: S :321::2::1::11: T :12::1::::::12: V :1::1:11:::4::: W ::::::::::::::: Y a:::::::::1:::: bits 6.5 5.8 5.2 4.5 * Relative 3.9 * * * Entropy 3.2 * * * (28.6 bits) 2.6 * ** * 1.9 * ** ** * * 1.3 * *** ****** * 0.6 *************** 0.0 --------------- Multilevel YSSFIXSLRNALKDP consensus L I V G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YSSFIESLRNALKDP MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- Q7M1Z2|reviewed|Ribosome 16 1.03e-13 LDLVNPTAGQ YSSFVDKIRNNVKDP NLKYGGTDIA Q41391|reviewed|Ribosome 16 1.03e-13 LDLVNPTAGQ YSSFVDKIRNNVKDP NLKYGGTDIA Q41389|reviewed|Ribosome 16 1.03e-13 LDLVNPTAGQ YSSFVDKIRNNVKDP NLKYGGTDIA P27561|reviewed|Ribosome 40 1.03e-13 LDLVNPTAGQ YSSFVDKIRNNVKDP NLKYGGTDIA P27559|reviewed|Ribosome 40 1.03e-13 LDLVNPTAGQ YSSFVDKIRNNVKDP NLKYGGTDIA P20656|reviewed|Ribosome 40 1.03e-13 LDLVNPTAGQ YSSFVDKIRNNVKDP NLKYGGTDIA P84854|reviewed|Ribosome 16 5.32e-13 FDVGNATINK YATFMESLRNEAKDP TLKCYGIPML P84853|reviewed|Ribosome 16 5.32e-13 YDAGNTTINK YATFMESLRNEAKDP SLQCYGIPML P23339|reviewed|Antivira 16 5.32e-13 FDAGNATINK YATFMESLRNEAKDP SLKCYGIPML Q6EH50|reviewed|Heterote 38 1.24e-12 YNVGSTTISK YATFLDDLRNEAKDP NLKCYGIPML P85208|reviewed|Dioicin- 14 1.24e-12 FDVENATPET YSSFLTSLREAVKDK KSTCHGMIMA P10297|reviewed|Antivira 38 3.95e-12 YNVGSTTISK YATFLNDLRNEAKDP SLKCYGIPML Q40772|reviewed|Antivira 39 6.77e-12 FDVENATPET YSNFLTSLREAVKDK KLTCHGMIMA P22851|reviewed|Ribosome 15 6.77e-12 FSLSGADSKS YSKFITALRKALPSK EKVSNIPLLL P11140|reviewed|Abrin-a| 17 6.77e-12 FSTEGATSQS YKQFIEALRERLRGG LIHDIPVLPD Q7M1L6|reviewed|rRNA 16 9.55e-12 LNLANPSKGQ YSSFVDRIRNNVRDP KLKYGGTDIA P34967|reviewed|Protein 16 9.55e-12 FDVGSATISK YTTFLESLRNQAKDP SLKCYGIPML C0HM39|reviewed|rRNA 16 9.55e-12 LNLANPSKGQ YSSFVDRIRNNVRDP KLKYGGTDIA Q06077|reviewed|Abrin-b| 17 3.42e-11 FTTEGATSQS YKQFIEALRQRLTGG LIHGIPVLPD Q06076|reviewed|Abrin-d| 17 3.42e-11 FTTEGATSQS YKQFIEALRQRLTGG LIHDIPVLPD P28590|reviewed|Abrin-c| 51 3.42e-11 FTTEGATSQS YKQFIEALRQRLTGG LIHDIPVLPD P84531|reviewed|Ribosome 14 6.13e-11 FDLSSATSSS YKTFIKNLREALPKD GKVYDIPVLL Q9M6E9|reviewed|Agglutin 36 9.30e-11 FTTGSATPAS YNQFIDALRERLTGG LIYGIPVLRD Q9M654|reviewed|Ribosome 62 1.39e-10 FNLKGATWQT YRDFIEKLREIVTRG ATTIAGTSIP P84530|reviewed|Ribosome 14 1.39e-10 FSLSGSSSTS YSKFIGALRKALPSN GTVYNITLLL P56626|reviewed|Type 33 1.39e-10 FDLSTATKKS YSSFITQLRDALPTQ GTVCGIPLLP Q00465|reviewed|Ribosome 34 1.58e-10 FSLSGSSSTS YSKFIGDLRKALPSN GTVYNITLLL P24476|reviewed|Ribosome 39 1.79e-10 LNLANPSASQ YSSFLDQIRNNVRDT SLIYGGTDVA P22244|reviewed|Protein 27 1.79e-10 TFNVQASSAD YATFIAGIRNKLRNP AHFSHNRPVL P04399|reviewed|Protein 26 1.79e-10 TFNVQASSAD YATFIAGIRNKLRNP AHFSHNEPVL P28522|reviewed|Ribosome 36 2.95e-10 IFPVEDANYP YSAFIASVRKDVIKH CTDHKGIFQP P25892|reviewed|Ribosome 36 2.95e-10 IFPVEDVNYP YSAFIASVRKDVIKH CTDHKGIFQP P25891|reviewed|Ribosome 36 2.95e-10 IFPVEDANYP YSAFIASVRKDVIKH CTDHKGIFQP P10593|reviewed|Albumin 36 2.95e-10 IFPVEDVNYP YSAFIASVRKDVIKH CTDHKGIFQP P33185|reviewed|Ribosome 37 3.32e-10 FRLSGATTTS YGVFIKNLREALPYE RKVYNIPLLR Q70US9|reviewed|Volkensi 17 4.21e-10 FDVPKATVES YTRFIRVLRDELAGG VSPQGIRRLR P85101|reviewed|Ribosome 13 4.21e-10 SWTVDSDSAK YSSFLDSLREEFGRG TPKVCNIPVT P16094|reviewed|Ribosome 37 7.41e-10 FRLSGADPRS YGMFIKDLRNALPFR EKVYNIPLLL Q9FRX4|reviewed|Putative 40 8.26e-10 FSLLGSNHKS YSKFITSMRNALPNA GDIYNIPLLV P09989|reviewed|Ribosome 37 9.21e-10 FRLSGATSSS YGVFISNLRKALPNE RKLYDIPLLR Q5F0I3|reviewed|Ribosome 37 1.02e-09 FSLAGADGQT YNTFIAKLRQELSIG TQKVANITVL P24478|reviewed|Ribosome 37 1.14e-09 FRLSGATSSS YGVFISNLRKALPYE RKLYDIPLLR P98184|reviewed|Ribosome 36 1.40e-09 FSLIGATGAT YKTFIRNLRTKLTVG TPRVYDIPVL Q6ITZ3|reviewed|Beta-gal 17 1.55e-09 DVTSQTTGEE YFRFITLLRDYVSSG SFSNEIPLLR Q03464|reviewed|Antivira 40 1.55e-09 FDVGNATINK YATFMKSIHNQAKDP TLKCYGIPML P82683|reviewed|Beta-gal 50 1.55e-09 RVTHQTTGDE YFRFITLLRDYVSSG SFSNEIPLLR P81446|reviewed|Beta-gal 50 1.55e-09 RVTHQTTGEE YFRFITLLRDYVSSG SFSNEIPLLR U3KRF8|reviewed|Seed 16 1.72e-09 LRLSEANSGT YKTFIGRVREELGSE TYRLYGIPVL P06750|reviewed|Agglutin 45 2.55e-09 FTTADATVES YTNFIRAVRSHLTTG ADVRHEIPVL Q9M653|reviewed|Ribosome 55 3.09e-09 IFFNILAGET YGDFIADLREIVTRT ADTKNGSIPV P33183|reviewed|Nigrin 43 3.39e-09 FNLDGAKSAT YRDFLSNLRKTVATG TYEVNGLPVL P21326|reviewed|Antivira 46 3.72e-09 ASLDLNNPTT YLSFITNIRTKVADK TEQCTIQKIS P02879|reviewed|Ricin|ta 56 5.37e-09 FTTAGATVQS YTNFIRAVRGRLTTG ADVRHEIPVL Q6H266|reviewed|Beta-gal 50 7.63e-09 RVTDKTTGDE YFRFITILRDYVSIG SFSNDIPLLR Q00531|reviewed|60 22 7.63e-09 VTPFNVMTDR YDEFIEKVRKALAGT AGAKVGPKPK Q9FBI2|reviewed|Shiga 35 2.05e-08 FTLDFSTAKT YVDSLNVIRSAIGTP LQTISSGGTS Q779K4|reviewed|Shiga 35 2.05e-08 FTLDFSTAKT YVDSLNVIRSAIGTP LQTISSGGTS Q32GM1|reviewed|Shiga 35 2.05e-08 FTLDFSTAKT YVDSLNVIRSAIGTP LQTISSGGTS P10149|reviewed|Shiga-li 35 2.05e-08 FTLDFSTAKT YVDSLNVIRSAIGTP LQTISSGGTS P08026|reviewed|Shiga-li 35 2.05e-08 FTLDFSTAKT YVDSLNVIRSAIGTP LQTISSGGTS P84786|reviewed|Ribosome 24 2.22e-08 LDIERLTGQT YTDFIKNLRRSLATW YLHGVPVLPL P09385|reviewed|Shiga-li 35 2.40e-08 FTIDFSTQQS YVSSLNSIRTEISTP LEHISQGTTS P29339|reviewed|Ribosome 37 2.80e-08 FDLSTATAKT YTKFIEDFRATLPFS HKVYDIPLLY P24817|reviewed|Ribosome 37 2.80e-08 FDLSTATAKT YTKFIEDFRATLPFS HKVYDIPLLY P33186|reviewed|Ribosome 63 3.02e-08 FSTKGATYIT YVNFLNELRVKLKPE GNSHGIPLLR O22415|reviewed|Ribosome 47 3.02e-08 VSFNLTGADT YGPFLRALQEKVILG NHTAFDLPVL P93543|reviewed|Ribosome 49 3.78e-08 FNLTEANSNE YRHFLQELRGKVILG SHRAFDLPVL Q41358|reviewed|Ribosome 47 5.46e-08 VSFNLTGADT YEPFLRALQEKVILG NHTAFDLPVL -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YSSFIESLRNALKDP MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- Q7M1Z2|reviewed|Ribosome 1e-13 15_[5]_223 Q41391|reviewed|Ribosome 1e-13 15_[5]_223 Q41389|reviewed|Ribosome 1e-13 15_[5]_223 P27561|reviewed|Ribosome 1e-13 39_[5]_103 P27559|reviewed|Ribosome 1e-13 39_[5]_238 P20656|reviewed|Ribosome 1e-13 39_[5]_245 P84854|reviewed|Ribosome 5.3e-13 15_[5]_231 P84853|reviewed|Ribosome 5.3e-13 15_[5]_231 P23339|reviewed|Antivira 5.3e-13 15_[5]_231 Q6EH50|reviewed|Heterote 1.2e-12 37_[5]_260 P85208|reviewed|Dioicin- 1.2e-12 13_[5]_238 P10297|reviewed|Antivira 4e-12 37_[5]_261 Q40772|reviewed|Antivira 6.8e-12 38_[5]_257 P22851|reviewed|Ribosome 6.8e-12 14_[5]_221 P11140|reviewed|Abrin-a| 6.8e-12 16_[5]_497 Q7M1L6|reviewed|rRNA 9.6e-12 15_[5]_224 P34967|reviewed|Protein 9.6e-12 15_[5]_235 C0HM39|reviewed|rRNA 9.6e-12 15_[5]_224 Q06077|reviewed|Abrin-b| 3.4e-11 16_[5]_496 Q06076|reviewed|Abrin-d| 3.4e-11 16_[5]_497 P28590|reviewed|Abrin-c| 3.4e-11 50_[5]_497 P84531|reviewed|Ribosome 6.1e-11 13_[5]_216 Q9M6E9|reviewed|Agglutin 9.3e-11 35_[5]_497 Q9M654|reviewed|Ribosome 1.4e-10 61_[5]_528 P84530|reviewed|Ribosome 1.4e-10 13_[5]_213 P56626|reviewed|Type 1.4e-10 32_[5]_247 Q00465|reviewed|Ribosome 1.6e-10 33_[5]_229 P24476|reviewed|Ribosome 1.8e-10 38_[5]_240 P22244|reviewed|Protein 1.8e-10 26_[5]_240 P04399|reviewed|Protein 1.8e-10 25_[5]_240 P28522|reviewed|Ribosome 2.9e-10 35_[5]_251 P25892|reviewed|Ribosome 2.9e-10 35_[5]_254 P25891|reviewed|Ribosome 2.9e-10 35_[5]_250 P10593|reviewed|Albumin 2.9e-10 35_[5]_253 P33185|reviewed|Ribosome 3.3e-10 36_[5]_239 Q70US9|reviewed|Volkensi 4.2e-10 16_[5]_492 P85101|reviewed|Ribosome 4.2e-10 12_[5]_207 P16094|reviewed|Ribosome 7.4e-10 36_[5]_235 Q9FRX4|reviewed|Putative 8.3e-10 39_[5]_232 P09989|reviewed|Ribosome 9.2e-10 36_[5]_238 Q5F0I3|reviewed|Ribosome 1e-09 36_[5]_249 P24478|reviewed|Ribosome 1.1e-09 36_[5]_238 P98184|reviewed|Ribosome 1.4e-09 35_[5]_232 Q6ITZ3|reviewed|Beta-gal 1.6e-09 16_[5]_489 Q03464|reviewed|Antivira 1.6e-09 39_[5]_240 P82683|reviewed|Beta-gal 1.6e-09 49_[5]_505 P81446|reviewed|Beta-gal 1.6e-09 49_[5]_500 U3KRF8|reviewed|Seed 1.7e-09 15_[5]_489 P06750|reviewed|Agglutin 2.5e-09 44_[5]_505 Q9M653|reviewed|Ribosome 3.1e-09 54_[5]_534 P33183|reviewed|Nigrin 3.4e-09 42_[5]_506 P21326|reviewed|Antivira 3.7e-09 45_[5]_218 P02879|reviewed|Ricin|ta 5.4e-09 55_[5]_506 Q6H266|reviewed|Beta-gal 7.6e-09 49_[5]_503 Q00531|reviewed|60 7.6e-09 21_[5]_524 Q9FBI2|reviewed|Shiga 2.1e-08 34_[5]_266 Q779K4|reviewed|Shiga 2.1e-08 34_[5]_266 Q32GM1|reviewed|Shiga 2.1e-08 34_[5]_266 P10149|reviewed|Shiga-li 2.1e-08 34_[5]_266 P08026|reviewed|Shiga-li 2.1e-08 34_[5]_266 P84786|reviewed|Ribosome 2.2e-08 23_[5]_219 P09385|reviewed|Shiga-li 2.4e-08 34_[5]_270 P29339|reviewed|Ribosome 2.8e-08 36_[5]_235 P24817|reviewed|Ribosome 2.8e-08 36_[5]_235 P33186|reviewed|Ribosome 3e-08 62_[5]_239 O22415|reviewed|Ribosome 3e-08 46_[5]_509 P93543|reviewed|Ribosome 3.8e-08 48_[5]_506 Q41358|reviewed|Ribosome 5.5e-08 46_[5]_509 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YSSFIESLRNALKDP MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YSSFIESLRNALKDP width=15 seqs=68 Q7M1Z2|reviewed|Ribosome ( 16) YSSFVDKIRNNVKDP 1 Q41391|reviewed|Ribosome ( 16) YSSFVDKIRNNVKDP 1 Q41389|reviewed|Ribosome ( 16) YSSFVDKIRNNVKDP 1 P27561|reviewed|Ribosome ( 40) YSSFVDKIRNNVKDP 1 P27559|reviewed|Ribosome ( 40) YSSFVDKIRNNVKDP 1 P20656|reviewed|Ribosome ( 40) YSSFVDKIRNNVKDP 1 P84854|reviewed|Ribosome ( 16) YATFMESLRNEAKDP 1 P84853|reviewed|Ribosome ( 16) YATFMESLRNEAKDP 1 P23339|reviewed|Antivira ( 16) YATFMESLRNEAKDP 1 Q6EH50|reviewed|Heterote ( 38) YATFLDDLRNEAKDP 1 P85208|reviewed|Dioicin- ( 14) YSSFLTSLREAVKDK 1 P10297|reviewed|Antivira ( 38) YATFLNDLRNEAKDP 1 Q40772|reviewed|Antivira ( 39) YSNFLTSLREAVKDK 1 P22851|reviewed|Ribosome ( 15) YSKFITALRKALPSK 1 P11140|reviewed|Abrin-a| ( 17) YKQFIEALRERLRGG 1 Q7M1L6|reviewed|rRNA ( 16) YSSFVDRIRNNVRDP 1 P34967|reviewed|Protein ( 16) YTTFLESLRNQAKDP 1 C0HM39|reviewed|rRNA ( 16) YSSFVDRIRNNVRDP 1 Q06077|reviewed|Abrin-b| ( 17) YKQFIEALRQRLTGG 1 Q06076|reviewed|Abrin-d| ( 17) YKQFIEALRQRLTGG 1 P28590|reviewed|Abrin-c| ( 51) YKQFIEALRQRLTGG 1 P84531|reviewed|Ribosome ( 14) YKTFIKNLREALPKD 1 Q9M6E9|reviewed|Agglutin ( 36) YNQFIDALRERLTGG 1 Q9M654|reviewed|Ribosome ( 62) YRDFIEKLREIVTRG 1 P84530|reviewed|Ribosome ( 14) YSKFIGALRKALPSN 1 P56626|reviewed|Type ( 33) YSSFITQLRDALPTQ 1 Q00465|reviewed|Ribosome ( 34) YSKFIGDLRKALPSN 1 P24476|reviewed|Ribosome ( 39) YSSFLDQIRNNVRDT 1 P22244|reviewed|Protein ( 27) YATFIAGIRNKLRNP 1 P04399|reviewed|Protein ( 26) YATFIAGIRNKLRNP 1 P28522|reviewed|Ribosome ( 36) YSAFIASVRKDVIKH 1 P25892|reviewed|Ribosome ( 36) YSAFIASVRKDVIKH 1 P25891|reviewed|Ribosome ( 36) YSAFIASVRKDVIKH 1 P10593|reviewed|Albumin ( 36) YSAFIASVRKDVIKH 1 P33185|reviewed|Ribosome ( 37) YGVFIKNLREALPYE 1 Q70US9|reviewed|Volkensi ( 17) YTRFIRVLRDELAGG 1 P85101|reviewed|Ribosome ( 13) YSSFLDSLREEFGRG 1 P16094|reviewed|Ribosome ( 37) YGMFIKDLRNALPFR 1 Q9FRX4|reviewed|Putative ( 40) YSKFITSMRNALPNA 1 P09989|reviewed|Ribosome ( 37) YGVFISNLRKALPNE 1 Q5F0I3|reviewed|Ribosome ( 37) YNTFIAKLRQELSIG 1 P24478|reviewed|Ribosome ( 37) YGVFISNLRKALPYE 1 P98184|reviewed|Ribosome ( 36) YKTFIRNLRTKLTVG 1 Q6ITZ3|reviewed|Beta-gal ( 17) YFRFITLLRDYVSSG 1 Q03464|reviewed|Antivira ( 40) YATFMKSIHNQAKDP 1 P82683|reviewed|Beta-gal ( 50) YFRFITLLRDYVSSG 1 P81446|reviewed|Beta-gal ( 50) YFRFITLLRDYVSSG 1 U3KRF8|reviewed|Seed ( 16) YKTFIGRVREELGSE 1 P06750|reviewed|Agglutin ( 45) YTNFIRAVRSHLTTG 1 Q9M653|reviewed|Ribosome ( 55) YGDFIADLREIVTRT 1 P33183|reviewed|Nigrin ( 43) YRDFLSNLRKTVATG 1 P21326|reviewed|Antivira ( 46) YLSFITNIRTKVADK 1 P02879|reviewed|Ricin|ta ( 56) YTNFIRAVRGRLTTG 1 Q6H266|reviewed|Beta-gal ( 50) YFRFITILRDYVSIG 1 Q00531|reviewed|60 ( 22) YDEFIEKVRKALAGT 1 Q9FBI2|reviewed|Shiga ( 35) YVDSLNVIRSAIGTP 1 Q779K4|reviewed|Shiga ( 35) YVDSLNVIRSAIGTP 1 Q32GM1|reviewed|Shiga ( 35) YVDSLNVIRSAIGTP 1 P10149|reviewed|Shiga-li ( 35) YVDSLNVIRSAIGTP 1 P08026|reviewed|Shiga-li ( 35) YVDSLNVIRSAIGTP 1 P84786|reviewed|Ribosome ( 24) YTDFIKNLRRSLATW 1 P09385|reviewed|Shiga-li ( 35) YVSSLNSIRTEISTP 1 P29339|reviewed|Ribosome ( 37) YTKFIEDFRATLPFS 1 P24817|reviewed|Ribosome ( 37) YTKFIEDFRATLPFS 1 P33186|reviewed|Ribosome ( 63) YVNFLNELRVKLKPE 1 O22415|reviewed|Ribosome ( 47) YGPFLRALQEKVILG 1 P93543|reviewed|Ribosome ( 49) YRHFLQELRGKVILG 1 Q41358|reviewed|Ribosome ( 47) YEPFLRALQEKVILG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YSSFIESLRNALKDP MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 15 n= 23902 bayes= 8.43635 E= 5.1e-255 -956 -775 -895 -939 -652 -827 -639 -992 -924 -900 -902 -946 -829 -906 -897 -951 -969 -982 -702 474 60 -408 -140 -82 42 35 -169 -466 115 -235 -325 -93 -379 -230 -19 183 38 37 -474 -414 -29 -409 127 -82 -461 -399 55 -467 96 -433 -41 -8 -42 83 45 127 122 -78 -474 -414 -745 -680 -868 -887 449 -769 -590 -874 -881 -792 -781 -885 -791 -854 -860 13 -854 -855 -638 -520 -631 -514 -900 -813 -464 -863 -699 309 -818 156 155 -882 -791 -771 -839 -840 -659 71 -661 -676 60 -415 167 196 -468 -58 -174 -474 73 -440 -332 84 -384 -97 69 -72 87 -432 -481 -420 103 -409 92 -20 -461 -110 -169 -204 147 -104 -325 83 -378 -27 -19 127 -340 16 -474 -414 -680 -558 -956 -841 -39 -885 -660 210 -841 262 -24 -921 -786 -733 -818 -875 -707 67 -603 -642 -415 -281 -496 -455 -521 -462 -10 -482 -158 -460 -404 -427 -388 -119 410 -445 -474 -548 -360 -485 -109 -410 72 196 -463 -110 -170 -469 174 -434 -327 210 -380 54 -137 14 -71 -212 -476 -415 170 -409 19 171 -461 -399 55 -116 132 -433 -325 99 -378 -27 69 -182 -71 -425 -474 55 42 -482 -866 -775 -138 -818 -675 54 -779 217 -358 -839 -769 -767 -814 -781 -621 236 -684 -676 -2 -444 -397 -282 -540 60 -240 60 229 -496 -394 -402 209 -295 74 13 74 -485 -538 -491 -302 -403 230 -194 2 57 -172 -115 73 -103 -321 -9 -129 -233 -19 34 99 -210 -472 -40 -175 -410 -140 82 -462 204 230 -469 46 -434 -326 -93 297 -96 -137 -116 -71 -426 -4 -415 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YSSFIESLRNALKDP MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 15 nsites= 68 E= 5.1e-255 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.117647 0.000000 0.014706 0.014706 0.058824 0.088235 0.000000 0.000000 0.102941 0.014706 0.000000 0.029412 0.000000 0.000000 0.044118 0.308824 0.102941 0.102941 0.000000 0.000000 0.058824 0.000000 0.132353 0.014706 0.000000 0.000000 0.014706 0.000000 0.088235 0.000000 0.014706 0.058824 0.029412 0.073529 0.073529 0.205882 0.191176 0.044118 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.911765 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.088235 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.558824 0.000000 0.264706 0.058824 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.117647 0.000000 0.000000 0.117647 0.000000 0.176471 0.176471 0.000000 0.044118 0.000000 0.000000 0.073529 0.000000 0.000000 0.117647 0.000000 0.014706 0.088235 0.044118 0.147059 0.000000 0.000000 0.000000 0.161765 0.000000 0.102941 0.029412 0.000000 0.029412 0.000000 0.014706 0.132353 0.044118 0.000000 0.117647 0.000000 0.029412 0.044118 0.205882 0.000000 0.088235 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.029412 0.000000 0.000000 0.279412 0.000000 0.558824 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.117647 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.029412 0.955882 0.000000 0.000000 0.000000 0.000000 0.000000 0.029412 0.000000 0.088235 0.176471 0.000000 0.029412 0.000000 0.000000 0.161765 0.000000 0.000000 0.294118 0.000000 0.058824 0.014706 0.088235 0.044118 0.014706 0.000000 0.000000 0.264706 0.000000 0.058824 0.147059 0.000000 0.000000 0.014706 0.029412 0.117647 0.000000 0.000000 0.132353 0.000000 0.029412 0.088235 0.014706 0.044118 0.000000 0.000000 0.058824 0.102941 0.000000 0.000000 0.000000 0.014706 0.000000 0.000000 0.088235 0.000000 0.411765 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.382353 0.000000 0.000000 0.073529 0.000000 0.000000 0.000000 0.000000 0.102941 0.000000 0.102941 0.235294 0.000000 0.000000 0.000000 0.176471 0.000000 0.088235 0.088235 0.132353 0.000000 0.000000 0.000000 0.000000 0.000000 0.279412 0.000000 0.044118 0.102941 0.000000 0.029412 0.073529 0.044118 0.000000 0.058824 0.014706 0.000000 0.044118 0.102941 0.161765 0.014706 0.000000 0.029412 0.014706 0.000000 0.014706 0.073529 0.000000 0.294118 0.058824 0.000000 0.058824 0.000000 0.000000 0.029412 0.338235 0.014706 0.014706 0.029412 0.044118 0.000000 0.014706 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YSSFIESLRNALKDP MEME-5 regular expression -------------------------------------------------------------------------------- YSSF[IL]XS[LI]RNA[LV]KD[PG] -------------------------------------------------------------------------------- Time 47.36 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- C0HM39|reviewed|rRNA 5.43e-44 15_[5(9.55e-12)]_32_[2(1.56e-13)]_\ 37_[4(2.92e-11)]_41_[1(3.71e-18)]_19_[3(5.42e-11)]_38 O22415|reviewed|Ribosome 5.97e-40 46_[5(3.02e-08)]_34_[2(2.49e-14)]_\ 28_[4(1.36e-11)]_39_[1(2.07e-18)]_21_[3(9.69e-11)]_330 P02879|reviewed|Ricin|ta 1.29e-40 55_[5(5.37e-09)]_34_[2(6.95e-15)]_\ 32_[4(4.72e-10)]_39_[1(6.08e-17)]_21_[3(3.70e-13)]_323 P04399|reviewed|Protein 1.58e-24 25_[5(1.79e-10)]_35_[2(7.08e-11)]_\ 20_[4(7.50e-07)]_42_[1(4.82e-10)]_25_[3(2.60e-07)]_61 P06750|reviewed|Agglutin 1.08e-38 44_[5(2.55e-09)]_34_[2(2.43e-13)]_\ 32_[4(3.14e-09)]_38_[1(6.08e-17)]_21_[3(3.70e-13)]_323 P08026|reviewed|Shiga-li 6.56e-30 34_[5(2.05e-08)]_39_[2(4.49e-11)]_\ 26_[4(5.43e-11)]_38_[1(2.69e-12)]_23_[3(1.00e-08)]_83 P09385|reviewed|Shiga-li 5.44e-26 34_[5(2.40e-08)]_39_[2(3.00e-10)]_\ 26_[4(4.18e-08)]_38_[1(2.69e-12)]_22_[3(2.11e-08)]_88 P09989|reviewed|Ribosome 3.77e-43 36_[5(9.21e-10)]_31_[2(2.18e-14)]_\ 30_[4(1.13e-13)]_34_[1(2.41e-14)]_19_[3(6.06e-13)]_67 P10149|reviewed|Shiga-li 6.56e-30 34_[5(2.05e-08)]_39_[2(4.49e-11)]_\ 26_[4(5.43e-11)]_38_[1(2.69e-12)]_23_[3(1.00e-08)]_83 P10297|reviewed|Antivira 1.32e-46 37_[5(3.95e-12)]_31_[2(7.58e-16)]_\ 40_[4(1.90e-11)]_38_[1(6.01e-19)]_19_[3(1.69e-10)]_76 P10593|reviewed|Albumin 1.08e-25 35_[5(2.95e-10)]_33_[2(2.18e-14)]_\ 102_[1(1.95e-10)]_21_[3(1.60e-08)]_55 P11140|reviewed|Abrin-a| 2.62e-42 16_[5(6.77e-12)]_32_[2(7.78e-14)]_\ 28_[4(1.36e-12)]_36_[1(1.56e-17)]_21_[3(9.79e-10)]_323 P16094|reviewed|Ribosome 2.49e-43 36_[5(7.41e-10)]_31_[2(2.18e-14)]_\ 30_[4(7.89e-13)]_34_[1(1.17e-16)]_19_[3(1.53e-11)]_64 P20656|reviewed|Ribosome 5.25e-47 39_[5(1.03e-13)]_31_[2(1.39e-13)]_\ 37_[4(1.55e-12)]_41_[1(3.71e-18)]_19_[3(3.43e-11)]_60 P21326|reviewed|Antivira 7.29e-40 45_[5(3.72e-09)]_29_[2(3.15e-12)]_\ 35_[4(1.90e-11)]_35_[1(1.00e-17)]_19_[3(4.66e-11)]_43 P22244|reviewed|Protein 1.60e-24 26_[5(1.79e-10)]_35_[2(7.08e-11)]_\ 20_[4(7.50e-07)]_42_[1(4.82e-10)]_25_[3(2.60e-07)]_61 P22851|reviewed|Ribosome 1.19e-39 14_[5(6.77e-12)]_31_[2(1.09e-14)]_\ 29_[4(7.89e-13)]_34_[1(2.92e-14)]_20_[3(1.79e-07)]_50 P23339|reviewed|Antivira 5.57e-51 15_[5(5.32e-13)]_31_[2(7.58e-16)]_\ 39_[4(1.36e-11)]_38_[1(6.01e-19)]_19_[3(1.38e-13)]_47 P24476|reviewed|Ribosome 2.04e-41 38_[5(1.79e-10)]_32_[2(1.56e-13)]_\ 37_[4(4.43e-11)]_41_[1(3.71e-18)]_19_[3(4.20e-10)]_54 P24478|reviewed|Ribosome 3.99e-43 36_[5(1.14e-09)]_31_[2(2.68e-15)]_\ 30_[4(7.89e-13)]_34_[1(2.41e-14)]_19_[3(6.06e-13)]_67 P24817|reviewed|Ribosome 1.04e-43 36_[5(2.80e-08)]_31_[2(8.08e-15)]_\ 28_[4(1.13e-13)]_34_[1(1.17e-16)]_19_[3(3.09e-12)]_66 P25891|reviewed|Ribosome 4.16e-33 35_[5(2.95e-10)]_33_[2(2.18e-14)]_\ 25_[4(1.59e-10)]_62_[1(4.71e-11)]_21_[3(1.60e-08)]_52 P25892|reviewed|Ribosome 4.44e-33 35_[5(2.95e-10)]_33_[2(2.18e-14)]_\ 25_[4(1.59e-10)]_63_[1(4.71e-11)]_21_[3(1.60e-08)]_55 P27559|reviewed|Ribosome 2.26e-44 39_[5(1.03e-13)]_31_[2(1.39e-13)]_\ 37_[4(1.55e-12)]_41_[1(3.97e-16)]_19_[3(1.93e-10)]_53 P27560|reviewed|Ribosome 2.01e-36 33_[2(3.36e-13)]_37_[4(6.10e-12)]_\ 41_[1(3.71e-18)]_19_[3(9.69e-11)]_49 P27561|reviewed|Ribosome 1.09e-26 39_[5(1.03e-13)]_31_[2(1.39e-13)]_\ 37_[4(1.55e-12)]_5 P28522|reviewed|Ribosome 4.23e-33 35_[5(2.95e-10)]_33_[2(2.18e-14)]_\ 25_[4(1.59e-10)]_62_[1(4.71e-11)]_21_[3(1.60e-08)]_53 P28590|reviewed|Abrin-c| 5.95e-40 50_[5(3.42e-11)]_32_[2(7.78e-14)]_\ 28_[4(1.82e-13)]_36_[1(2.95e-15)]_21_[3(1.55e-09)]_323 P29339|reviewed|Ribosome 1.04e-43 36_[5(2.80e-08)]_31_[2(8.08e-15)]_\ 28_[4(1.13e-13)]_34_[1(1.17e-16)]_19_[3(3.09e-12)]_66 P33183|reviewed|Nigrin 1.96e-40 42_[5(3.39e-09)]_34_[2(1.09e-14)]_\ 28_[4(3.60e-11)]_32_[1(2.07e-18)]_21_[3(2.52e-10)]_334 P33185|reviewed|Ribosome 2.35e-42 36_[5(3.32e-10)]_31_[2(9.86e-14)]_\ 30_[4(1.13e-13)]_34_[1(5.40e-13)]_19_[3(1.09e-13)]_68 P33186|reviewed|Ribosome 5.90e-35 62_[5(3.02e-08)]_32_[2(1.19e-10)]_\ 28_[4(4.72e-10)]_38_[1(2.38e-15)]_19_[3(1.70e-12)]_65 P34967|reviewed|Protein 7.66e-45 15_[5(9.55e-12)]_35_[2(2.25e-15)]_\ 40_[4(1.90e-11)]_37_[1(4.17e-17)]_19_[3(5.42e-11)]_47 P56626|reviewed|Type 9.90e-41 32_[5(1.39e-10)]_31_[2(5.85e-12)]_\ 28_[4(2.36e-11)]_5_[3(3.86e-05)]_17_[1(1.73e-15)]_19_[3(2.95e-13)]_78 P81446|reviewed|Beta-gal 8.26e-41 49_[5(1.55e-09)]_11_[1(4.48e-05)]_8_\ [2(1.33e-15)]_28_[4(4.95e-15)]_35_[1(3.53e-14)]_21_[3(7.73e-10)]_325 P82683|reviewed|Beta-gal 7.47e-41 49_[5(1.55e-09)]_11_[1(4.48e-05)]_8_\ [2(1.33e-15)]_28_[4(3.22e-15)]_35_[1(4.67e-14)]_21_[3(7.73e-10)]_330 P84530|reviewed|Ribosome 3.21e-44 13_[5(1.39e-10)]_31_[2(3.71e-15)]_\ 29_[4(1.82e-13)]_34_[1(5.12e-14)]_19_[3(1.40e-12)]_43 P84531|reviewed|Ribosome 9.91e-45 13_[5(6.13e-11)]_31_[2(1.37e-12)]_\ 28_[4(2.01e-12)]_34_[1(1.02e-16)]_19_[3(1.09e-13)]_47 P84786|reviewed|Ribosome 4.23e-22 23_[5(2.22e-08)]_30_[2(3.29e-08)]_\ 27_[4(2.27e-08)]_35_[1(1.02e-09)]_22_[3(4.25e-08)]_48 P84853|reviewed|Ribosome 1.46e-48 15_[5(5.32e-13)]_31_[2(7.58e-16)]_\ 39_[4(4.28e-09)]_38_[1(6.01e-19)]_19_[3(1.38e-13)]_47 P84854|reviewed|Ribosome 1.04e-47 15_[5(5.32e-13)]_31_[2(7.58e-16)]_\ 39_[4(1.20e-09)]_38_[1(6.01e-19)]_19_[3(3.73e-12)]_47 P85101|reviewed|Ribosome 4.36e-37 12_[5(4.21e-10)]_31_[2(3.45e-10)]_\ 39_[4(3.62e-10)]_36_[1(6.08e-17)]_20_[3(6.28e-11)]_24 P85208|reviewed|Dioicin- 3.92e-38 13_[5(1.24e-12)]_34_[2(5.85e-12)]_\ 37_[4(7.28e-10)]_40_[1(1.23e-14)]_21_[3(1.28e-10)]_49 P93543|reviewed|Ribosome 1.95e-35 48_[5(3.78e-08)]_34_[2(3.04e-11)]_\ 28_[4(6.01e-11)]_39_[1(5.23e-18)]_21_[3(2.87e-10)]_327 P98184|reviewed|Ribosome 1.03e-40 35_[5(1.40e-09)]_32_[2(1.95e-13)]_\ 28_[4(2.88e-13)]_6_[3(1.22e-05)]_18_[1(1.17e-16)]_19_[3(1.38e-09)]_60 Q00465|reviewed|Ribosome 1.40e-44 33_[5(1.58e-10)]_31_[2(2.18e-14)]_\ 29_[4(1.82e-13)]_34_[1(1.56e-15)]_19_[3(1.40e-12)]_59 Q00531|reviewed|60 8.59e-20 21_[5(7.63e-09)]_47_[2(2.80e-09)]_\ 26_[4(8.88e-07)]_55_[1(7.05e-10)]_20_[3(2.80e-07)]_319 Q03464|reviewed|Antivira 1.51e-45 39_[5(1.55e-09)]_31_[2(2.68e-15)]_\ 40_[4(5.43e-11)]_37_[1(6.01e-19)]_19_[3(7.34e-13)]_56 Q06076|reviewed|Abrin-d| 6.83e-39 16_[5(3.42e-11)]_32_[2(7.78e-14)]_\ 28_[4(1.82e-13)]_36_[1(5.12e-14)]_21_[3(1.55e-09)]_323 Q06077|reviewed|Abrin-b| 1.07e-34 16_[5(3.42e-11)]_32_[2(2.63e-12)]_\ 28_[4(3.62e-10)]_35_[1(1.81e-14)]_21_[3(1.55e-09)]_323 Q32GM1|reviewed|Shiga 6.56e-30 34_[5(2.05e-08)]_39_[2(4.49e-11)]_\ 26_[4(5.43e-11)]_38_[1(2.69e-12)]_23_[3(1.00e-08)]_83 Q40772|reviewed|Antivira 5.68e-35 38_[5(6.77e-12)]_30_[2(5.85e-12)]_\ 37_[4(2.12e-08)]_40_[1(3.63e-15)]_21_[3(2.40e-09)]_72 Q41358|reviewed|Ribosome 2.13e-40 46_[5(5.46e-08)]_34_[2(2.49e-14)]_\ 28_[4(2.59e-12)]_39_[1(2.07e-18)]_21_[3(9.69e-11)]_330 Q41389|reviewed|Ribosome 1.09e-44 15_[5(1.03e-13)]_31_[2(1.39e-13)]_\ 37_[4(1.55e-12)]_41_[1(3.97e-16)]_19_[3(1.93e-10)]_38 Q41391|reviewed|Ribosome 2.24e-47 15_[5(1.03e-13)]_31_[2(1.39e-13)]_\ 37_[4(1.55e-12)]_41_[1(3.71e-18)]_19_[3(3.43e-11)]_38 Q5F0I3|reviewed|Ribosome 2.19e-40 36_[5(1.02e-09)]_33_[2(1.02e-12)]_\ 30_[4(1.11e-09)]_33_[1(4.96e-16)]_21_[3(3.47e-14)]_75 Q6EH50|reviewed|Heterote 4.93e-41 37_[5(1.24e-12)]_31_[2(7.58e-16)]_\ 40_[4(1.45e-10)]_37_[1(3.96e-12)]_19_[3(6.47e-12)]_76 Q6H266|reviewed|Beta-gal 1.27e-38 49_[5(7.63e-09)]_11_[1(4.48e-05)]_8_\ [2(1.33e-15)]_28_[4(3.87e-13)]_35_[1(5.12e-14)]_21_[3(2.52e-10)]_328 Q6ITZ3|reviewed|Beta-gal 8.20e-40 16_[5(1.55e-09)]_33_[2(1.33e-15)]_\ 24_[4(8.14e-14)]_34_[1(3.53e-14)]_21_[3(7.73e-10)]_320 Q70US9|reviewed|Volkensi 3.14e-27 16_[5(4.21e-10)]_32_[2(1.37e-10)]_\ 28_[4(4.28e-09)]_34_[1(1.26e-13)]_24_[3(2.09e-06)]_317 Q779K4|reviewed|Shiga 6.56e-30 34_[5(2.05e-08)]_39_[2(4.49e-11)]_\ 26_[4(5.43e-11)]_38_[1(2.69e-12)]_23_[3(1.00e-08)]_83 Q7M1L6|reviewed|rRNA 5.43e-44 15_[5(9.55e-12)]_32_[2(1.56e-13)]_\ 37_[4(2.92e-11)]_41_[1(3.71e-18)]_19_[3(5.42e-11)]_38 Q7M1Z2|reviewed|Ribosome 1.21e-44 15_[5(1.03e-13)]_31_[2(1.39e-13)]_\ 37_[4(6.87e-12)]_41_[1(5.59e-16)]_19_[3(3.43e-11)]_38 Q9FBI2|reviewed|Shiga 6.56e-30 34_[5(2.05e-08)]_39_[2(4.49e-11)]_\ 26_[4(5.43e-11)]_38_[1(2.69e-12)]_23_[3(1.00e-08)]_83 Q9FRX4|reviewed|Putative 1.55e-40 39_[5(8.26e-10)]_31_[2(5.40e-14)]_\ 29_[4(1.70e-11)]_34_[1(1.12e-15)]_19_[3(2.13e-11)]_62 Q9M653|reviewed|Ribosome 4.08e-35 54_[5(3.09e-09)]_36_[2(8.24e-12)]_\ 28_[4(7.72e-12)]_38_[1(3.69e-17)]_25_[3(2.31e-08)]_350 Q9M654|reviewed|Ribosome 1.44e-37 61_[5(1.39e-10)]_34_[2(9.76e-12)]_\ 29_[4(7.89e-13)]_35_[1(4.96e-16)]_21_[3(8.70e-10)]_352 Q9M6E9|reviewed|Agglutin 4.05e-41 35_[5(9.30e-11)]_32_[2(3.77e-12)]_\ 28_[4(1.13e-16)]_36_[1(3.55e-16)]_21_[3(1.10e-08)]_323 U3KRF8|reviewed|Seed 4.71e-29 15_[5(1.72e-09)]_32_[2(2.11e-10)]_\ 30_[4(4.98e-09)]_34_[1(4.57e-13)]_21_[3(9.79e-10)]_315 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: kodomo ********************************************************************************