BLASTN 2.15.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: ../cat.fna
           70 sequences; 2,425,730,029 total letters



Query= CP014225.1:complement(926804-928359)|16S_rRNA|Escherichia coli str.
K-12 substr. MG1655 strain K-12

Length=1556
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

CM031425.1 Felis catus isolate Fca126 chromosome E1, whole genome...  56.3    8e-05


>CM031425.1 Felis catus isolate Fca126 chromosome E1, whole genome 
shotgun sequence
Length=61876196

 Score = 56.3 bits (61),  Expect = 8e-05
 Identities = 38/43 (88%), Gaps = 0/43 (0%)
 Strand=Plus/Plus

Query  1494      AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA  1536
                 |||||||||||||||  ||||||| ||||||||||  ||||||
Sbjct  12962018  AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA  12962060


 Score = 56.3 bits (61),  Expect = 8e-05
 Identities = 38/43 (88%), Gaps = 0/43 (0%)
 Strand=Plus/Minus

Query  1494      AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA  1536
                 |||||||||||||||  ||||||| ||||||||||  ||||||
Sbjct  13026270  AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA  13026228


 Score = 56.3 bits (61),  Expect = 8e-05
 Identities = 38/43 (88%), Gaps = 0/43 (0%)
 Strand=Plus/Plus

Query  1494      AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA  1536
                 |||||||||||||||  ||||||| ||||||||||  ||||||
Sbjct  13048823  AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA  13048865


 Score = 56.3 bits (61),  Expect = 8e-05
 Identities = 38/43 (88%), Gaps = 0/43 (0%)
 Strand=Plus/Plus

Query  1494      AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA  1536
                 |||||||||||||||  ||||||| ||||||||||  ||||||
Sbjct  13093985  AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA  13094027



Lambda      K        H
   0.634    0.408    0.912 

Gapped
Lambda      K        H
   0.625    0.410    0.780 

Effective search space used: 3694383316037


  Database: ../cat.fna
    Posted date:  Dec 25, 2023  7:49 PM
  Number of letters in database: 2,425,730,029
  Number of sequences in database:  70



Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2