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| Header |
| Program |
needle |
| Rundate |
Tue Mar 27 2007 18:19:36
|
| Align
format |
srspair |
| Report file |
temp_job2.needlep
|
| Results |
| |
#=======================================
#
# Aligned_sequences: 2
# 1: KPYK1_ECOLI
# 2: KPYK2_ECOLI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity: 144/357 (40.3%)
# Similarity: 212/357 (59.4%)
# Gaps: 22/357 ( 6.2%)
# Score: 668.0
#
#
#=======================================
KPYK1_ECOLI 1 -MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQN 49
:::||||.|:||.|:.:..|.|::.||.||:|:|||||...:|..|...
KPYK2_ECOLI 1 RLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADK 50
KPYK1_ECOLI 50 LRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSV 99
:|.:.:|.|:..|||.|.:||:||.. :.|.|:.|....||.:
KPYK2_ECOLI 51 VREIAAKLGRHVAILGDLQGPKIRVS--------TFKEGKVFLNIGDKFL 92
KPYK1_ECOLI 100 I--------GNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNK 141
: |:.|.|.:.|:|...|:..|:.:|:|||.:.::|..::|.|
KPYK2_ECOLI 93 LDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMK 142
KPYK1_ECOLI 142 VICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAA 191
|..:|...|.|..|||:|..|..::..||.||||.|:......|||::|.
KPYK2_ECOLI 143 VFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKADIKTAALIGVDYLAV 192
KPYK1_ECOLI 192 SFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGL---NNFDEILEASD 238
||.|...| :.....|....|.:..|::|:|..|.: :..|:|:.|||
KPYK2_ECOLI 193 SFPRCGED-LNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDIILASD 241
KPYK1_ECOLI 239 GIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNP 288
.:|||||||||||...|::..||.:|.:..:..:.|||||||::|||.||
KPYK2_ECOLI 242 VVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNP 291
KPYK1_ECOLI 289 RPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRV 338
.|||||..|||||:||||||||||.|:|.|:||.|.|:.||.:|...:::
KPYK2_ECOLI 292 MPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKI 341
KPYK1_ECOLI 339 MNSRLEF 345
.:..:.
KPYK2_ECOLI 342 PSINVS- 347
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