Quick SearchSelect Databanks to SearchCreate your QueryUse Analysis ToolsManage your Query ResultsManage your ProjectsCreate Custom ViewsDataBanks Information PageHelp Page All jobs complete
Reset     Query  found 1 entries
  Apply Options to:  
     
 
 selected results only
 unselected results only
 

  Result Options  
     
 
Launch analysis tool:
Launch selected tool
Show tools relevant to these
results: Tools available for these results
Link to related information:
  Find related information
Save results: Select options to save data
 

  Display Options  
     
 
View results using:
Show results
per page
Printer friendly view
Apply Display Options
 
Header
Program needle
Rundate Tue Mar 27 2007 18:23:34
Align format srspair
Report file temp_job3.needlep
Results
 
#=======================================
#
# Aligned_sequences: 2
# 1: KPYK1_ECOLI
# 2: KPYK_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity:      99/348 (28.4%)
# Similarity:   145/348 (41.7%)
# Gaps:         121/348 (34.8%)
# Score: 471.0
# 
#
#=======================================

KPYK1_ECOLI        1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNL     50
                                                                       
KPYK_METJA         0 --------------------------------------------------      0

KPYK1_ECOLI       51 RNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVI    100
                                                                       
KPYK_METJA         0 --------------------------------------------------      0

KPYK1_ECOLI      101 GNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNG    150
                                  ...:..|:.:|::||.|.:.|.. :.:|:|..|...|
KPYK_METJA         1 -------------IDTIEEGHFILINDGKIKLRVVE-KTDKIIAVVEVGG     36

KPYK1_ECOLI      151 DLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDV    200
                     ::.|..|||||...|.||.:.|.|.:::.|..|:..:::|.||:|.:.||
KPYK_METJA        37 EIKEGMGVNLPDTRIELPIIDETDLKNIKFAVEKDFEYIALSFVRNKEDV     86

KPYK1_ECOLI      201 IEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVE    250
                     .|:::.:..:.|: ..:|||||.:|||.|..||...|||:||||||||||
KPYK_METJA        87 KELKDIISEYKGD-CEVISKIETKEGLKNIKEIARESDGVMVARGDLGVE    135

KPYK1_ECOLI      251 IPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVAN    300
                     :|:|.:...||.::....|...:.|||||:|||||.||.|||||..|:||
KPYK_METJA       136 VPIENIPIEQKNILRIANRYGILSITATQILDSMINNPFPTRAEVTDIAN    185

KPYK1_ECOLI      301 AILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEF---    345
                     ||.||||.:|||.|:..||||:||:.::..:.:..|....   ||   
KPYK_METJA       186 AIYDGTDCLMLSNETTIGKYPIEAIKVLNKVAKVADEHYE---EFGDR    230


Additional Information