Quick SearchSelect Databanks to SearchCreate your QueryUse Analysis ToolsManage your Query ResultsManage your ProjectsCreate Custom ViewsDataBanks Information PageHelp Page All jobs complete
Reset     Query  found 1 entries
  Apply Options to:  
     
 
 selected results only
 unselected results only
 

  Result Options  
     
 
Launch analysis tool:
Launch selected tool
Show tools relevant to these
results: Tools available for these results
Link to related information:
  Find related information
Save results: Select options to save data
 

  Display Options  
     
 
View results using:
Show results
per page
Printer friendly view
Apply Display Options
 
Header
Program needle
Rundate Tue Mar 27 2007 19:03:01
Align format srspair
Report file temp_job1.needlep
Results
 
#=======================================
#
# Aligned_sequences: 2
# 1: KPYK1_ECOLI
# 2: KPYM_HUMAN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity:     185/357 (51.8%)
# Similarity:   235/357 (65.8%)
# Gaps:          15/357 ( 4.2%)
# Score: 862.5
# 
#
#=======================================

KPYK1_ECOLI        1 -MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQN     49
                      .:.|.|:|||||.:.|.|.|.:|:.:||||.|||||||.:..|.:.|:|
KPYM_HUMAN         1 TARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKN     50

KPYK1_ECOLI       50 LRNVMSKTG------KTAAILLDTKGPEIRT--MKLEGGNDVSLKAGQTF     91
                     :|.......      :..|:.||||||||||  :|..|..:|.||.|.|.
KPYM_HUMAN        51 VRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATL    100

KPYK1_ECOLI       92 TFTTDKSVIG--NSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEG    139
                     ..|.|.:.:.  :..::.:.|:.....:.||:.:.||||||.::|.....
KPYM_HUMAN       101 KITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGA    150

KPYK1_ECOLI      140 NKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFV    189
                     :.::.:|.|.|.||..|||||||.::.|||::|||.|||.||.||.||.|
KPYM_HUMAN       151 DFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV    200

KPYK1_ECOLI      190 AASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDG    239
                     .||||||.|||.|:|:.| ...|:||.|||||||.||:..||||||||||
KPYM_HUMAN       201 FASFIRKASDVHEVRKVL-GEKGKNIKIISKIENHEGVRRFDEILEASDG    249

KPYK1_ECOLI      240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPR    289
                     |||||||||:|||.|:|..||||||.:|.||.|.||.|||||:||||.||
KPYM_HUMAN       250 IMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPR    299

KPYK1_ECOLI      290 PTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTD-RV    338
                     |||||..|||||:|||.|.:|||||:|||.||||||.:...|....: .:
KPYM_HUMAN       300 PTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAI    349

KPYK1_ECOLI      339 MNSRLEF    345
                     .:.:|  
KPYM_HUMAN       350 YHLQL--    354


Additional Information