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| Header |
| Program |
needle
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| Rundate |
Tue Mar 27 2007 19:21:43
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| Align format |
srspair
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| Report file |
temp_job2.needlep
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| Results |
| |
#=======================================
#
# Aligned_sequences: 2
# 1: KPYK2_ECOLI
# 2: KPYK_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 353
# Identity: 84/353 (23.8%)
# Similarity: 133/353 (37.7%)
# Gaps: 129/353 (36.5%)
# Score: 358.5
#
#
#=======================================
KPYK2_ECOLI 1 RLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADK 50
KPYK_METJA 0 -------------------------------------------------- 0
KPYK2_ECOLI 51 VREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKG 100
KPYK_METJA 0 -------------------------------------------------- 0
KPYK2_ECOLI 101 EGDKEKVGIDYKGLPADVV-PGDILLLDDGRVQLKVLEVQGMKVFTEVTV 149
.|.: .|..:|::||:::|:|:| :..|:...|.|
KPYK_METJA 1 ---------------IDTIEEGHFILINDGKIKLRVVE-KTDKIIAVVEV 34
KPYK2_ECOLI 150 GGPLSNNKGINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGE 199
||.:....|:|.....:....:.|.|..:||.|.....:|:|:||.|..|
KPYK_METJA 35 GGEIKEGMGVNLPDTRIELPIIDETDLKNIKFAVEKDFEYIALSFVRNKE 84
KPYK2_ECOLI 200 DLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDIILASDVVMVARGD 249
|:...:.:..:...|.::::|:|..|.:.: :.:|...||.|||||||
KPYK_METJA 85 DVKELKDIISEYKGDCEVISKIETKEGLKN---IKEIARESDGVMVARGD 131
KPYK2_ECOLI 250 LGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVM 299
||||:....:...||.::|.|.:.....|||||:::|||.||.||||||.
KPYK_METJA 132 LGVEVPIENIPIEQKNILRIANRYGILSITATQILDSMINNPFPTRAEVT 181
KPYK2_ECOLI 300 DVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVS-- 347
|:|||:.||||.:|||.||..|:||.|.:..:.:|. |:...:..
KPYK_METJA 182 DIANAIYDGTDCLMLSNETTIGKYPIEAIKVLNKVA----KVADEHYEEF 227
KPYK2_ECOLI 347 --- 347
KPYK_METJA 228 GDR 230
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| Additional Information |
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