########################################
# Program: needle
# Rundate: Sat Apr 14 2007 12:10:34
# Commandline: needle
#    [-asequence] 1OKC.fasta
#    [-bsequence] P02722.fasta
#    [-outfile] compare.needle
#    -auto
# Align_format: srspair
# Report_file: compare.needle
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: 1OKC
# 2: P02722
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     297/298 (99.7%)
# Similarity:   297/298 (99.7%)
# Gaps:           1/298 ( 0.3%)
# Score: 1542.0
# 
#
#=======================================

1OKC               1 -SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQ     49
                      |||||||||||||||||||||||||||||||||||||||||||||||||
P02722             1 MSDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQ     50

1OKC              50 YKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFL     99
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
P02722            51 YKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFL    100

1OKC             100 GGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAA    149
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
P02722           101 GGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAA    150

1OKC             150 QREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKG    199
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
P02722           151 QREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKG    200

1OKC             200 MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIM    249
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
P02722           201 MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIM    250

1OKC             250 YTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV    297
                     ||||||||||||||||||||||||||||||||||||||||||||||||
P02722           251 YTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV    298


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