RID: YZEBUNXP014 Job Title:GAG_MLVFF P26806 Gag polyprotein (Core Program: BLASTP Query: GAG_MLVFF P26806 Gag polyprotein (Core polyprotein) (Matrix protein p15) (RNA-binding phosphoprotein p12) (pp12) (Capsid protein p30) (Nucleocapsid protein p10-Gag) (NC-gag) ID: lcl|Query_4131500(amino acid) Length: 84 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Friend murin... NA 11797 165 165 100% 4e-49 100.00 538 P26806.3 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Friend murin... NA 11797 168 168 100% 5e-49 100.00 1738 P26809.2 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Friend murin... NA 11797 165 165 100% 1e-48 100.00 626 P0DOH5.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Friend murin... NA 11798 159 159 100% 5e-47 96.43 538 P26805.3 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Friend murin... NA 11798 162 162 100% 5e-47 96.43 1738 P26808.2 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Friend murin... NA 11798 159 159 100% 1e-46 96.43 626 P0DOH6.1 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Friend murin... NA 11796 136 136 100% 7e-38 94.05 1739 P26810.2 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Friend murin... NA 11796 134 134 100% 9e-38 94.05 539 P26807.3 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Friend murin... NA 11796 134 134 100% 2e-37 94.05 627 P0DOH0.1 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Radiation mu... NA 11787 104 104 100% 9e-27 65.88 1734 P11227.2 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Radiation mu... NA 11787 103 103 100% 2e-26 65.88 537 P11269.3 RecName: Full=Gag-pol polyprotein; Contains: RecName:... Murine leuke... NA 31687 102 102 100% 4e-26 64.71 1734 Q7SVK7.2 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Moloney muri... NA 11809 102 102 100% 4e-26 78.57 538 P03334.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Finkel-Biski... NA 353765 100 100 100% 5e-26 64.71 310 P29175.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Murine leuke... NA 31687 102 102 100% 6e-26 64.71 537 P29167.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Moloney muri... NA 31691 101 101 100% 6e-26 78.57 468 P32594.3 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Cas-Br-E mur... NA 11792 102 102 100% 7e-26 78.57 1733 P08361.2 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Cas-Br-E mur... NA 11792 101 101 100% 1e-25 78.57 536 P27460.3 RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix... Abelson muri... NA 11788 97.4 97.4 100% 1e-25 76.19 235 P03333.3 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Cas-Br-E mur... NA 11792 101 101 100% 1e-25 78.57 624 P0DOH4.1 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Moloney muri... NA 882209 100 100 100% 2e-25 77.38 626 Q8UN02.2 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Moloney muri... NA 928306 99.8 99.8 100% 5e-25 76.19 1738 P03355.5 RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Co... Moloney muri... NA 928306 99.0 99.0 100% 9e-25 76.19 538 P03332.4 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... AKR (endogen... NA 11791 95.5 95.5 100% 2e-23 61.18 1734 P03356.3 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... AKR (endogen... NA 11791 94.7 94.7 100% 3e-23 61.18 625 P0DOG8.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... AKR (endogen... NA 11791 94.7 94.7 100% 3e-23 61.18 537 P03336.3 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Xenotropic M... NA 356663 94.7 94.7 100% 3e-23 64.71 1733 Q2F7J3.1 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Xenotropic M... NA 373193 94.4 94.4 100% 5e-23 64.71 1733 A1Z651.1 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Xenotropic M... NA 356664 94.4 94.4 100% 5e-23 64.71 1733 Q2F7J0.1 RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Co... Xenotropic M... NA 356663 94.0 94.0 100% 5e-23 64.71 536 Q2F7J2.1 RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Co... Xenotropic M... NA 373193 93.2 93.2 100% 9e-23 64.71 536 Q27ID9.1 RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Co... Xenotropic M... NA 356664 93.2 93.2 100% 9e-23 64.71 536 Q2F7I9.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... HoMuLV murin... NA 11799 76.6 76.6 100% 6e-17 55.68 540 P21435.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Murine leuke... NA 31688 65.5 65.5 99% 5e-13 53.57 536 P29168.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Duplan murin... NA 11794 49.7 49.7 88% 2e-07 50.00 529 P23090.3 Alignments: >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Friend murine leukemia virus (ISOLATE FB29)] Sequence ID: P26806.3 Length: 538 Range 1: 132 to 215 Score:165 bits(417), Expect:4e-49, Method:Compositional matrix adjust., Identities:84/84(100%), Positives:84/84(100%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP Sbjct 132 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGRKEPPVADSTTSQAF Sbjct 192 SPMVSRLRGRKEPPVADSTTSQAF 215 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Friend murine leukemia virus (ISOLATE FB29)] Sequence ID: P26809.2 Length: 1738 Range 1: 132 to 215 Score:168 bits(425), Expect:5e-49, Method:Compositional matrix adjust., Identities:84/84(100%), Positives:84/84(100%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP Sbjct 132 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGRKEPPVADSTTSQAF Sbjct 192 SPMVSRLRGRKEPPVADSTTSQAF 215 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Friend murine leukemia virus (ISOLATE FB29)] Sequence ID: P0DOH5.1 Length: 626 Range 1: 220 to 303 Score:165 bits(417), Expect:1e-48, Method:Compositional matrix adjust., Identities:84/84(100%), Positives:84/84(100%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP Sbjct 220 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 279 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGRKEPPVADSTTSQAF Sbjct 280 SPMVSRLRGRKEPPVADSTTSQAF 303 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Friend murine leukemia virus (ISOLATE PVC-211)] Sequence ID: P26805.3 Length: 538 Range 1: 132 to 215 Score:159 bits(402), Expect:5e-47, Method:Compositional matrix adjust., Identities:81/84(96%), Positives:82/84(97%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDG GDSGEVAPTEGAPD Sbjct 132 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGKGDSGEVAPTEGAPDS 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGR+EPPVADSTTSQAF Sbjct 192 SPMVSRLRGRREPPVADSTTSQAF 215 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Friend murine leukemia virus (ISOLATE PVC-211)] Sequence ID: P26808.2 Length: 1738 Range 1: 132 to 215 Score:162 bits(410), Expect:5e-47, Method:Compositional matrix adjust., Identities:81/84(96%), Positives:82/84(97%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDG GDSGEVAPTEGAPD Sbjct 132 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGKGDSGEVAPTEGAPDS 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGR+EPPVADSTTSQAF Sbjct 192 SPMVSRLRGRREPPVADSTTSQAF 215 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Friend murine leukemia virus (ISOLATE PVC-211)] Sequence ID: P0DOH6.1 Length: 626 Range 1: 220 to 303 Score:159 bits(402), Expect:1e-46, Method:Compositional matrix adjust., Identities:81/84(96%), Positives:82/84(97%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDG GDSGEVAPTEGAPD Sbjct 220 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGKGDSGEVAPTEGAPDS 279 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGR+EPPVADSTTSQAF Sbjct 280 SPMVSRLRGRREPPVADSTTSQAF 303 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Friend murine leukemia virus (ISOLATE 57)] Sequence ID: P26810.2 Length: 1739 Range 1: 133 to 216 Score:136 bits(342), Expect:7e-38, Method:Compositional matrix adjust., Identities:79/84(94%), Positives:80/84(95%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGP S DGNG SGEVAPTEGAPD Sbjct 133 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPSSSDGNGGSGEVAPTEGAPDS 192 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGR+EPPVADSTTSQAF Sbjct 193 SPMVSRLRGRREPPVADSTTSQAF 216 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Friend murine leukemia virus (ISOLATE 57)] Sequence ID: P26807.3 Length: 539 Range 1: 133 to 216 Score:134 bits(338), Expect:9e-38, Method:Compositional matrix adjust., Identities:79/84(94%), Positives:80/84(95%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGP S DGNG SGEVAPTEGAPD Sbjct 133 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPSSSDGNGGSGEVAPTEGAPDS 192 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGR+EPPVADSTTSQAF Sbjct 193 SPMVSRLRGRREPPVADSTTSQAF 216 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Friend murine leukemia virus (ISOLATE 57)] Sequence ID: P0DOH0.1 Length: 627 Range 1: 221 to 304 Score:134 bits(338), Expect:2e-37, Method:Compositional matrix adjust., Identities:79/84(94%), Positives:80/84(95%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGP S DGNG SGEVAPTEGAPD Sbjct 221 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPSSSDGNGGSGEVAPTEGAPDS 280 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPMVSRLRGR+EPPVADSTTSQAF Sbjct 281 SPMVSRLRGRREPPVADSTTSQAF 304 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Radiation murine leukemia virus] Sequence ID: P11227.2 Length: 1734 Range 1: 130 to 214 Score:104 bits(260), Expect:9e-27, Method:Compositional matrix adjust., Identities:56/85(66%), Positives:66/85(77%), Gaps:1/85(1%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +P +PQVL D+GGPLIDLLTEDPPPY + GP SPDG+GD E T P Sbjct 130 PALTPSIKPRPSKPQVLSDNGGPLIDLLTEDPPPYGEQGPSSPDGDGDREEATYTSEIPA 189 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRG+++PP ADSTTS+AF Sbjct 190 PSPMVSRLRGKRDPPAADSTTSRAF 214 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Radiation murine leukemia virus] Sequence ID: P11269.3 Length: 537 Range 1: 130 to 214 Score:103 bits(258), Expect:2e-26, Method:Compositional matrix adjust., Identities:56/85(66%), Positives:66/85(77%), Gaps:1/85(1%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +P +PQVL D+GGPLIDLLTEDPPPY + GP SPDG+GD E T P Sbjct 130 PALTPSIKPRPSKPQVLSDNGGPLIDLLTEDPPPYGEQGPSSPDGDGDREEATYTSEIPA 189 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRG+++PP ADSTTS+AF Sbjct 190 PSPMVSRLRGKRDPPAADSTTSRAF 214 >RecName: Full=Gag-pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Murine leukemia virus (strain BM5 ECO)] Sequence ID: Q7SVK7.2 Length: 1734 Range 1: 130 to 214 Score:102 bits(255), Expect:4e-26, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:64/85(75%), Gaps:1/85(1%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PA T + +P +PQVL D GGPLIDLLTEDPPPY + GP SPDG+GD E T P Sbjct 130 PAFTPSIKPRPSKPQVLSDDGGPLIDLLTEDPPPYGEQGPSSPDGDGDREEATSTSEIPA 189 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRG+++PP ADSTTS+AF Sbjct 190 PSPMVSRLRGKRDPPAADSTTSRAF 214 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-gag; Short=NC-gag [Moloney murine sarcoma virus] Sequence ID: P03334.3 Length: 538 Range 1: 132 to 215 Score:102 bits(255), Expect:4e-26, Method:Compositional matrix adjust., Identities:66/84(79%), Positives:69/84(82%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVL DSGGPLIDLLTEDPPPYRDP PP D +GDSGE P APDP Sbjct 132 PALTPSLGAKPKPQVLSDSGGPLIDLLTEDPPPYRDPRPPPSDRDGDSGEATPAGEAPDP 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+EPPVADSTTSQAF Sbjct 192 SPMASRLRGRREPPVADSTTSQAF 215 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA [Finkel-Biskis-Jinkins murine sarcoma virus] Sequence ID: P29175.3 Length: 310 Range 1: 130 to 214 Score:100 bits(248), Expect:5e-26, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:64/85(75%), Gaps:1/85(1%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +P +PQVL D GGPLIDLLTEDPPPY + GP S DG+GD E T P Sbjct 130 PALTPSIKPRPSKPQVLSDDGGPLIDLLTEDPPPYGEQGPSSSDGDGDREEATSTSEIPA 189 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRG+++PP ADSTTS+AF Sbjct 190 PSPMVSRLRGKRDPPAADSTTSRAF 214 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Murine leukemia virus (strain BM5 ECO)] Sequence ID: P29167.3 Length: 537 Range 1: 130 to 214 Score:102 bits(253), Expect:6e-26, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:64/85(75%), Gaps:1/85(1%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PA T + +P +PQVL D GGPLIDLLTEDPPPY + GP SPDG+GD E T P Sbjct 130 PAFTPSIKPRPSKPQVLSDDGGPLIDLLTEDPPPYGEQGPSSPDGDGDREEATSTSEIPA 189 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRG+++PP ADSTTS+AF Sbjct 190 PSPMVSRLRGKRDPPAADSTTSRAF 214 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA [Moloney murine sarcoma virus (strain TS110)] Sequence ID: P32594.3 Length: 468 Range 1: 132 to 215 Score:101 bits(252), Expect:6e-26, Method:Compositional matrix adjust., Identities:66/84(79%), Positives:69/84(82%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVL DSGGPLIDLLTEDPPPYRDP PP D +GDSGE P APDP Sbjct 132 PALTPSLGAKPKPQVLSDSGGPLIDLLTEDPPPYRDPRPPPSDRDGDSGEATPAGEAPDP 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+EPPVADSTTSQAF Sbjct 192 SPMASRLRGRREPPVADSTTSQAF 215 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Cas-Br-E murine leukemia virus] Sequence ID: P08361.2 Length: 1733 Range 1: 130 to 213 Score:102 bits(253), Expect:7e-26, Method:Compositional matrix adjust., Identities:66/84(79%), Positives:69/84(82%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVLPDSGGPLIDLLTEDPPPYRDPGPP D + D GE AP APDP Sbjct 130 PALTPSLGAKPKPQVLPDSGGPLIDLLTEDPPPYRDPGPPPSDRDRDDGEAAPAGEAPDP 189 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+E PVADSTTSQAF Sbjct 190 SPMASRLRGRRELPVADSTTSQAF 213 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Cas-Br-E murine leukemia virus] Sequence ID: P27460.3 Length: 536 Range 1: 130 to 213 Score:101 bits(251), Expect:1e-25, Method:Compositional matrix adjust., Identities:66/84(79%), Positives:69/84(82%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVLPDSGGPLIDLLTEDPPPYRDPGPP D + D GE AP APDP Sbjct 130 PALTPSLGAKPKPQVLPDSGGPLIDLLTEDPPPYRDPGPPPSDRDRDDGEAAPAGEAPDP 189 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+E PVADSTTSQAF Sbjct 190 SPMASRLRGRRELPVADSTTSQAF 213 >RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; Contains: RecName: Full=Capsid protein p30; Short=CA [Abelson murine leukemia virus] Sequence ID: P03333.3 Length: 235 Range 1: 132 to 215 Score:97.4 bits(241), Expect:1e-25, Method:Compositional matrix adjust., Identities:64/84(76%), Positives:68/84(80%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVL DSGGPLIDLLTEDPPPYRDP PP D +G+ GE P APDP Sbjct 132 PALTPSLGAKPKPQVLSDSGGPLIDLLTEDPPPYRDPRPPPSDRDGNGGEATPAGEAPDP 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+EPPVADSTTSQAF Sbjct 192 SPMASRLRGRREPPVADSTTSQAF 215 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Cas-Br-E murine leukemia virus] Sequence ID: P0DOH4.1 Length: 624 Range 1: 218 to 301 Score:101 bits(251), Expect:1e-25, Method:Compositional matrix adjust., Identities:66/84(79%), Positives:69/84(82%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVLPDSGGPLIDLLTEDPPPYRDPGPP D + D GE AP APDP Sbjct 218 PALTPSLGAKPKPQVLPDSGGPLIDLLTEDPPPYRDPGPPPSDRDRDDGEAAPAGEAPDP 277 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+E PVADSTTSQAF Sbjct 278 SPMASRLRGRRELPVADSTTSQAF 301 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80; Contains: RecName: Full=Nextended-MA-p12; Contains: RecName: Full=CA-NC [Moloney murine leukemia virus neuropathogenic variant ts1-92b] Sequence ID: Q8UN02.2 Length: 626 Range 1: 220 to 303 Score:100 bits(249), Expect:2e-25, Method:Compositional matrix adjust., Identities:65/84(77%), Positives:69/84(82%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVL DS GPLIDLLTEDPPPYRDP PP DG+G+SGE P APDP Sbjct 220 PALTPSLGAKPKPQVLSDSEGPLIDLLTEDPPPYRDPRPPPSDGDGNSGEATPAGEAPDP 279 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+EPPVADSTTSQAF Sbjct 280 SPMASRLRGRREPPVADSTTSQAF 303 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Short=PR; AltName: Full=p14; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; AltName: Full=p80; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=p46 [Moloney murine leukemia virus isolate Shinnick] Sequence ID: P03355.5 Length: 1738 Range 1: 132 to 215 Score:99.8 bits(247), Expect:5e-25, Method:Compositional matrix adjust., Identities:64/84(76%), Positives:68/84(80%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVL DSGGPLIDLLTEDPPPYRDP PP D +G+ GE P APDP Sbjct 132 PALTPSLGAKPKPQVLSDSGGPLIDLLTEDPPPYRDPRPPPSDRDGNGGEATPAGEAPDP 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+EPPVADSTTSQAF Sbjct 192 SPMASRLRGRREPPVADSTTSQAF 215 >RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Moloney murine leukemia virus isolate Shinnick] Sequence ID: P03332.4 Length: 538 Range 1: 132 to 215 Score:99.0 bits(245), Expect:9e-25, Method:Compositional matrix adjust., Identities:64/84(76%), Positives:68/84(80%), Gaps:0/84(0%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 PALT L KP+PQVL DSGGPLIDLLTEDPPPYRDP PP D +G+ GE P APDP Sbjct 132 PALTPSLGAKPKPQVLSDSGGPLIDLLTEDPPPYRDPRPPPSDRDGNGGEATPAGEAPDP 191 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 SPM SRLRGR+EPPVADSTTSQAF Sbjct 192 SPMASRLRGRREPPVADSTTSQAF 215 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [AKR (endogenous) murine leukemia virus] Sequence ID: P03356.3 Length: 1734 Range 1: 130 to 214 Score:95.5 bits(236), Expect:2e-23, Method:Compositional matrix adjust., Identities:52/85(61%), Positives:63/85(74%), Gaps:1/85(1%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +P +PQVL D+GGPLIDLL+EDPPPY G S DG+GD E T P Sbjct 130 PALTPSIKPRPSKPQVLSDNGGPLIDLLSEDPPPYGGQGLSSSDGDGDREEATSTSEIPA 189 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSP+VSRLRG+++PP ADSTTS+AF Sbjct 190 PSPIVSRLRGKRDPPAADSTTSRAF 214 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [AKR (endogenous) murine leukemia virus] Sequence ID: P0DOG8.1 Length: 625 Range 1: 218 to 302 Score:94.7 bits(234), Expect:3e-23, Method:Compositional matrix adjust., Identities:52/85(61%), Positives:63/85(74%), Gaps:1/85(1%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +P +PQVL D+GGPLIDLL+EDPPPY G S DG+GD E T P Sbjct 218 PALTPSIKPRPSKPQVLSDNGGPLIDLLSEDPPPYGGQGLSSSDGDGDREEATSTSEIPA 277 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSP+VSRLRG+++PP ADSTTS+AF Sbjct 278 PSPIVSRLRGKRDPPAADSTTSRAF 302 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-gag; Short=NC-gag [AKR (endogenous) murine leukemia virus] Sequence ID: P03336.3 Length: 537 Range 1: 130 to 214 Score:94.7 bits(234), Expect:3e-23, Method:Compositional matrix adjust., Identities:52/85(61%), Positives:63/85(74%), Gaps:1/85(1%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +P +PQVL D+GGPLIDLL+EDPPPY G S DG+GD E T P Sbjct 130 PALTPSIKPRPSKPQVLSDNGGPLIDLLSEDPPPYGGQGLSSSDGDGDREEATSTSEIPA 189 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSP+VSRLRG+++PP ADSTTS+AF Sbjct 190 PSPIVSRLRGKRDPPAADSTTSRAF 214 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-pol; Contains: RecName: Full=Protease p14; Short=PR; Contains: RecName: Full=Reverse transcriptase/ribonuclease H p80; Short=RT; Contains: RecName: Full=Integrase p46; Short=IN [Xenotropic MuLV-related virus VP35] Sequence ID: Q2F7J3.1 Length: 1733 Range 1: 130 to 213 Score:94.7 bits(234), Expect:3e-23, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:61/85(71%), Gaps:2/85(2%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +KP +PQVLPDSGGPLIDLLTEDPPPY P S + E A T Sbjct 130 PALTLSIKSKPPKPQVLPDSGGPLIDLLTEDPPPY-GVQPSSSARENNEEEAATTSEVSP 188 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRGR++PP ADSTTSQAF Sbjct 189 PSPMVSRLRGRRDPPAADSTTSQAF 213 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-pol; Contains: RecName: Full=Protease p14; Short=PR; Contains: RecName: Full=Reverse transcriptase/ribonuclease H p80; Short=RT; Contains: RecName: Full=Integrase p46; Short=IN [Xenotropic MuLV-related virus VP62] Sequence ID: A1Z651.1 Length: 1733 Range 1: 130 to 213 Score:94.4 bits(233), Expect:5e-23, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:61/85(71%), Gaps:2/85(2%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +KP +PQVLPDSGGPLIDLLTEDPPPY P S + E A T Sbjct 130 PALTPSIKSKPPKPQVLPDSGGPLIDLLTEDPPPY-GAQPSSSARENNEEEAATTSEVSP 188 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRGR++PP ADSTTSQAF Sbjct 189 PSPMVSRLRGRRDPPAADSTTSQAF 213 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-pol; Contains: RecName: Full=Protease p14; Short=PR; Contains: RecName: Full=Reverse transcriptase/ribonuclease H p80; Short=RT; Contains: RecName: Full=Integrase p46; Short=IN [Xenotropic MuLV-related virus VP42] Sequence ID: Q2F7J0.1 Length: 1733 Range 1: 130 to 213 Score:94.4 bits(233), Expect:5e-23, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:61/85(71%), Gaps:2/85(2%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +KP +PQVLPDSGGPLIDLLTEDPPPY P S + E A T Sbjct 130 PALTPSIKSKPPKPQVLPDSGGPLIDLLTEDPPPY-GAQPSSSARENNEEEAATTSEVSP 188 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRGR++PP ADSTTSQAF Sbjct 189 PSPMVSRLRGRRDPPAADSTTSQAF 213 >RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-gag; Short=NC-gag [Xenotropic MuLV-related virus VP35] Sequence ID: Q2F7J2.1 Length: 536 Range 1: 130 to 213 Score:94.0 bits(232), Expect:5e-23, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:61/85(71%), Gaps:2/85(2%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +KP +PQVLPDSGGPLIDLLTEDPPPY P S + E A T Sbjct 130 PALTLSIKSKPPKPQVLPDSGGPLIDLLTEDPPPY-GVQPSSSARENNEEEAATTSEVSP 188 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRGR++PP ADSTTSQAF Sbjct 189 PSPMVSRLRGRRDPPAADSTTSQAF 213 >RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [Xenotropic MuLV-related virus VP62] Sequence ID: Q27ID9.1 Length: 536 Range 1: 130 to 213 Score:93.2 bits(230), Expect:9e-23, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:61/85(71%), Gaps:2/85(2%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +KP +PQVLPDSGGPLIDLLTEDPPPY P S + E A T Sbjct 130 PALTPSIKSKPPKPQVLPDSGGPLIDLLTEDPPPY-GAQPSSSARENNEEEAATTSEVSP 188 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRGR++PP ADSTTSQAF Sbjct 189 PSPMVSRLRGRRDPPAADSTTSQAF 213 >RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-gag; Short=NC-gag [Xenotropic MuLV-related virus VP42] Sequence ID: Q2F7I9.1 Length: 536 Range 1: 130 to 213 Score:93.2 bits(230), Expect:9e-23, Method:Compositional matrix adjust., Identities:55/85(65%), Positives:61/85(71%), Gaps:2/85(2%) Query 1 PALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPD 59 PALT + +KP +PQVLPDSGGPLIDLLTEDPPPY P S + E A T Sbjct 130 PALTPSIKSKPPKPQVLPDSGGPLIDLLTEDPPPY-GAQPSSSARENNEEEAATTSEVSP 188 Query 60 PSPMVSRLRGRKEPPVADSTTSQAF 84 PSPMVSRLRGR++PP ADSTTSQAF Sbjct 189 PSPMVSRLRGRRDPPAADSTTSQAF 213 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-gag; Short=NC-gag [HoMuLV murine leukemia virus] Sequence ID: P21435.3 Length: 540 Range 1: 130 to 217 Score:76.6 bits(187), Expect:6e-17, Method:Compositional matrix adjust., Identities:49/88(56%), Positives:58/88(65%), Gaps:4/88(4%) Query 1 PALTSPLNTKPRPQVLPDSGGPLIDLLTEDPPPYRDP--GPPSPDGNGDSGEV--APTEG 56 PALT + P+ QVL D GGPLIDLL++DPPPYR P PP+ E+ P + Sbjct 130 PALTPTKSPSPKTQVLSDDGGPLIDLLSDDPPPYRGPENQPPAGRPTTTMQEMPRLPLKV 189 Query 57 APDPSPMVSRLRGRKEPPVADSTTSQAF 84 +PSPM SRLRGR+E P ADSTTSQAF Sbjct 190 PQEPSPMASRLRGRREHPAADSTTSQAF 217 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-gag; Short=NC-gag [Murine leukemia virus (strain DEF27)] Sequence ID: P29168.3 Length: 536 Range 1: 131 to 213 Score:65.5 bits(158), Expect:5e-13, Method:Compositional matrix adjust., Identities:45/84(54%), Positives:54/84(64%), Gaps:2/84(2%) Query 2 ALTSPLNTKP-RPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDP 60 AL + TKP + +VLP +GGPLIDLLTE+PP + GPP P G P P Sbjct 131 ALIPSIKTKPPKSRVLPTNGGPLIDLLTENPPNLGEQGPPLPKGPVKK-RRPPPPRYSPP 189 Query 61 SPMVSRLRGRKEPPVADSTTSQAF 84 PMVSRLRG ++PP ADSTTS+AF Sbjct 190 GPMVSRLRGNRDPPAADSTTSRAF 213 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-gag; Short=NC-gag [Duplan murine leukemia virus] Sequence ID: P23090.3 Length: 529 Range 1: 138 to 206 Score:49.7 bits(117), Expect:2e-07, Method:Compositional matrix adjust., Identities:37/74(50%), Positives:46/74(62%), Gaps:5/74(6%) Query 11 PRPQVLPDSGGPLIDLLTEDPPPYRDPGPPSPDGNGDSGEVAPTEGAPDPSPMVSRLRGR 70 P+ +VLP +GGPLIDLLTE+ P PP G P P+PM SR+RGR Sbjct 138 PKSRVLPPNGGPLIDLLTENLPNL----PPLSKGPVKKRRPPPPR-YSPPNPMESRVRGR 192 Query 71 KEPPVADSTTSQAF 84 ++PP ADST+SQAF Sbjct 193 RDPPAADSTSSQAF 206