TBLASTN 2.8.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: X5.fasta 1,868 sequences; 23,962,143 total letters Query= RS31_YEAST P05759 Ubiquitin-40S ribosomal protein S31 (Ubiquitin) (40S ribosomal protein S31 {ECO:0000303|PubMed:9559554}) (CEP76) (S37) (Small ribosomal subunit protein eS31 {ECO:0000303|PubMed:24524803}) (YS24) (Precursor) Length=152 Score E Sequences producing significant alignments: (Bits) Value scaffold-17 204 7e-62 scaffold-451 204 8e-62 scaffold-378 130 2e-40 scaffold-105 137 3e-38 scaffold-693 132 1e-36 scaffold-157 132 1e-36 scaffold-123 71.2 4e-15 scaffold-6 67.8 6e-14 scaffold-287 60.8 1e-11 scaffold-44 57.4 2e-10 scaffold-423 42.7 3e-05 scaffold-51 30.4 0.38 scaffold-444 28.5 1.6 > scaffold-17 Length=2125590 Score = 204 bits (520), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 130/148 (88%), Positives = 137/148 (93%), Gaps = 0/148 (0%) Frame = -3 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 MQIFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN Sbjct 1261753 MQIFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1261574 Query 61 IQKESTLHlvlrlrgggkkrkkkvYTTPkkikhkhkkvkLAVLSYYKVDAEGKVTKLRRE 120 I KESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKHKKVKLAVL YYKVD +GKVT+LRRE Sbjct 1261573 I*KESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKHKKVKLAVLKYYKVDDDGKVTRLRRE 1261394 Query 121 CSNPTCGAGVFLANHKDRLYCGKCHSVY 148 C TCGAG+F+A HKDR YCG+CH Y Sbjct 1261393 CPAETCGAGIFMAMHKDR*YCGRCHLTY 1261310 Score = 129 bits (325), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 64/68 (94%), Positives = 66/68 (97%), Gaps = 0/68 (0%) Frame = +2 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 M IFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQ RLIFAGKQLEDGRTLSDYN Sbjct 1362203 M*IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ*RLIFAGKQLEDGRTLSDYN 1362382 Query 61 IQKESTLH 68 IQKESTLH Sbjct 1362383 IQKESTLH 1362406 Score = 129 bits (325), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 64/68 (94%), Positives = 66/68 (97%), Gaps = 0/68 (0%) Frame = +2 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 MQIFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQ RLIFAGKQLEDGRTLSDYN Sbjct 1361747 MQIFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQ*RLIFAGKQLEDGRTLSDYN 1361926 Query 61 IQKESTLH 68 IQKESTLH Sbjct 1361927 IQKESTLH 1361950 Score = 126 bits (316), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 63/68 (93%), Positives = 65/68 (96%), Gaps = 0/68 (0%) Frame = +2 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 M IFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQ RLIFAGKQLEDGRTLSDYN Sbjct 1361975 M*IFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQ*RLIFAGKQLEDGRTLSDYN 1362154 Query 61 IQKESTLH 68 IQKESTLH Sbjct 1362155 IQKESTLH 1362178 Score = 126 bits (316), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 63/68 (93%), Positives = 65/68 (96%), Gaps = 0/68 (0%) Frame = +2 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 M IFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQ RLIFAGKQLEDGRTLSDYN Sbjct 1362431 M*IFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQ*RLIFAGKQLEDGRTLSDYN 1362610 Query 61 IQKESTLH 68 IQKESTLH Sbjct 1362611 IQKESTLH 1362634 Score = 126 bits (316), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 63/68 (93%), Positives = 65/68 (96%), Gaps = 0/68 (0%) Frame = +2 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 M IFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQQRLIFAGK LEDGRTLSDYN Sbjct 1362659 M*IFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQQRLIFAGK*LEDGRTLSDYN 1362838 Query 61 IQKESTLH 68 IQKESTLH Sbjct 1362839 IQKESTLH 1362862 Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust. Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 0/24 (0%) Frame = -3 Query 39 DQQRLIFAGKQLEDGRTLSDYNIQ 62 D +LIF+GK LE+ + LSDY ++ Sbjct 1118605 DL*KLIFSGKILENEKLLSDYGVK 1118534 Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust. Identities = 14/23 (61%), Positives = 16/23 (70%), Gaps = 0/23 (0%) Frame = -2 Query 1 MQIFVKTLTGKTITLEVESSDTI 23 M+I VKTL KT EVE SDT+ Sbjct 1118804 MKITVKTLQ*KTFNFEVELSDTV 1118736 > scaffold-451 Length=486760 Score = 204 bits (519), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 130/148 (88%), Positives = 137/148 (93%), Gaps = 0/148 (0%) Frame = -2 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 MQIFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN Sbjct 389460 MQIFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQQRLIFAGKQLEDGRTLSDYN 389281 Query 61 IQKESTLHlvlrlrgggkkrkkkvYTTPkkikhkhkkvkLAVLSYYKVDAEGKVTKLRRE 120 I KESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKHKKVKLAVL YYKVD +GKVT+LRRE Sbjct 389280 I*KESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKHKKVKLAVLKYYKVDDDGKVTRLRRE 389101 Query 121 CSNPTCGAGVFLANHKDRLYCGKCHSVY 148 C TCGAG+F+A HKDR YCG+CH Y Sbjct 389100 CPAETCGAGIFMAMHKDR*YCGRCHLTY 389017 > scaffold-378 Length=253 Score = 130 bits (326), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 64/68 (94%), Positives = 66/68 (97%), Gaps = 0/68 (0%) Frame = +3 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 MQIFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN Sbjct 6 MQIFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185 Query 61 IQKESTLH 68 I KESTLH Sbjct 186 I*KESTLH 209 > scaffold-105 Length=655906 Score = 137 bits (344), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 66/68 (97%), Positives = 68/68 (100%), Gaps = 0/68 (0%) Frame = -3 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN Sbjct 655664 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 655485 Query 61 IQKESTLH 68 IQKESTLH Sbjct 655484 IQKESTLH 655461 Score = 136 bits (343), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 66/68 (97%), Positives = 68/68 (100%), Gaps = 0/68 (0%) Frame = -3 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN Sbjct 655208 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 655029 Query 61 IQKESTLH 68 IQKESTLH Sbjct 655028 IQKESTLH 655005 Score = 133 bits (335), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 65/68 (96%), Positives = 67/68 (99%), Gaps = 0/68 (0%) Frame = -3 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 M IFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN Sbjct 655436 M*IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 655257 Query 61 IQKESTLH 68 IQKESTLH Sbjct 655256 IQKESTLH 655233 > scaffold-693 Length=1268102 Score = 132 bits (333), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 65/68 (96%), Positives = 67/68 (99%), Gaps = 0/68 (0%) Frame = +2 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 MQIFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN Sbjct 1146728 MQIFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1146907 Query 61 IQKESTLH 68 IQKESTLH Sbjct 1146908 IQKESTLH 1146931 > scaffold-157 Length=706690 Score = 132 bits (332), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 65/68 (96%), Positives = 67/68 (99%), Gaps = 0/68 (0%) Frame = +1 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 MQIFVKTLTGKTITLEVESSDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN Sbjct 197338 MQIFVKTLTGKTITLEVESSDTIENVKAKI*DKEGIPPDQQRLIFAGKQLEDGRTLSDYN 197517 Query 61 IQKESTLH 68 IQKESTLH Sbjct 197518 IQKESTLH 197541 > scaffold-123 Length=442268 Score = 71.2 bits (173), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 33/68 (49%), Positives = 51/68 (75%), Gaps = 0/68 (0%) Frame = -3 Query 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 + +KTLTGK+I++ ++ S T++ +K ++ KEGIP Q RLIF+G+QLED +TL DY+ Sbjct 211392 ISFIIKTLTGKSISVTLKQSSTVERLKCELFLKEGIPTRQ*RLIFSGRQLEDPKTLQDYH 211213 Query 61 IQKESTLH 68 I+ +S LH Sbjct 211212 IENDSVLH 211189 Score = 57.8 bits (138), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/64 (47%), Positives = 41/64 (64%), Gaps = 0/64 (0%) Frame = -3 Query 5 VKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64 + TLTG+ + V + T++ +K KI +EG+P QRLIFA LEDGRTL YNI+ Sbjct 212445 ITTLTGRKFNVFV*DNSTVEALKQKIYIREGLPGKDQRLIFAD**LEDGRTL*SYNIKDH 212266 Query 65 STLH 68 S +H Sbjct 212265 SVVH 212254 > scaffold-6 Length=53904 Score = 67.8 bits (164), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 0/66 (0%) Frame = -2 Query 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62 +FVKTLTG T + + S T++ +K KI G P +QRLIF G+QL+D RTL ++I+ Sbjct 52322 LFVKTLTGMTYNISLRDSSTVETLKKKISQVAGTPTWKQRLIF*GRQLDDERTLRSFDIR 52143 Query 63 KESTLH 68 + STLH Sbjct 52142 QHSTLH 52125 > scaffold-287 Length=687983 Score = 60.8 bits (146), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 27/56 (48%), Positives = 38/56 (68%), Gaps = 0/56 (0%) Frame = +3 Query 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68 I ++VE +D I +K +I++KE IPP QRLIF GKQ+ D +T DY ++ S LH Sbjct 204873 IEIDVEPADKIVRIKERIEEKEAIPPQ*QRLIFGGKQMSDDKTAKDYGVEGGSVLH 205040 > scaffold-44 Length=398337 Score = 57.4 bits (137), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 0/56 (0%) Frame = -3 Query 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68 I ++VE +D I +K +I++KE IPP RLIF GKQ+ D +T DY ++ S LH Sbjct 285664 IEIDVEPADKIVRIKERIEEKEAIPPQ**RLIFGGKQMSDDKTAKDYGVEGGSVLH 285497 > scaffold-423 Length=1446679 Score = 42.7 bits (99), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 35/54 (65%), Gaps = 0/54 (0%) Frame = +3 Query 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68 +E+E + T+ +K KI ++ IP ++ RLI++G+ L+D TL Y I+ T+H Sbjct 1002927 VEIEKTSTVLQLKEKIASEKEIPANE*RLIYSGRVLKDPDTLETYKIEDGHTIH 1003088 Score = 41.6 bits (96), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 35/54 (65%), Gaps = 0/54 (0%) Frame = -3 Query 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68 +E+E + T+ +K KI ++ IP ++ RLI++G+ L+D TL Y I+ T+H Sbjct 297215 VEIEKTSTVL*LKEKIASEKEIPANE*RLIYSGRVLKDPDTLETYKIEDGHTIH 297054 > scaffold-51 Length=57241 Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +1 Query 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNI 61 I L+ + +T+ ++K K+ + P QRL GK+LE + RTL Y++ Sbjct 29350 IKLQFDLDNTVRDLKVKLMNLVDASPINQRLFLLGKELEANERTLRSYDV 29499 > scaffold-444 Length=851481 Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust. Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 0/24 (0%) Frame = -1 Query 39 DQQRLIFAGKQLEDGRTLSDYNIQ 62 D +LIF+GK LE+ + LSDY ++ Sbjct 408522 DL*KLIFSGKILENEKLLSDYGVK 408451 Lambda K H a alpha 0.316 0.133 0.384 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 492731127 Database: X5.fasta Posted date: Dec 26, 2021 5:01 PM Number of letters in database: 23,962,143 Number of sequences in database: 1,868 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40