#1
seqret '*.fasta' file.fasta
#2
seqretsplit seq.fasta -auto
#4
transeq seq.fasta -frame 1 -table 0 -out protein.fasta
#5
getorf seq.fasta seq.orf -minsize 100 -auto
#6
seqret name.fasta -outseq msf::new.msf
#8
featcopy chromosome.gb new.gff