Program: needle
Rundate: Tue Mar 28 2006 14:06:37
Align_format: srspair
Report_file: 1to3_1_1.needle


Aligned_sequences: 2
1: DPO3X_ECOLI
2: third
Matrix: EBLOSUM62
Gap_penalty: 1.0
Extend_penalty: 1.0

Length: 647
Identity:      17/647 ( 2.6%)
Similarity:    18/647 ( 2.8%)
Gaps:         627/647 (96.9%)
Score: 78.0

DPO3X_ECOLI        1 MSYQVLARKWRP--QTFADVV--GQEHVLTALANGLSLGRIHHAYLFSGT     46
                     ||||||||||||  .| | |:  .|  |                      
third              1 MSYQVLARKWRPVAPT-A-VMTPTQ--V----------------------     24

DPO3X_ECOLI       47 RGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAA     96
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI       97 SRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP    146
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      147 PEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHI    196
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      197 AHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDD    246
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      247 DQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ    296
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      297 LSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRR    346
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      347 MGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSA    396
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      397 PQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAA    446
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      447 LERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKA    496
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      497 LKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE    546
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      547 ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV    596
                                                                       
third             25 --------------------------------------------------     24

DPO3X_ECOLI      597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI    643
                                                                    
third             25 -----------------------------------------------     24