Program: needle
Rundate: Tue Mar 28 2006 13:57:09
Align_format: srspair
Report_file: 1to3.needle
Aligned_sequences: 2
1: DPO3X_ECOLI
2: third
Matrix: EBLOSUM62
Gap_penalty: 10.0
Extend_penalty: 0.5
Length: 643
Identity: 14/643 ( 2.2%)
Similarity: 17/643 ( 2.6%)
Gaps: 619/643 (96.3%)
Score: 64.0
DPO3X_ECOLI 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVG 50
third 1 -------------------------------------------------- 0
DPO3X_ECOLI 51 KTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTK 100
third 1 -------------------------------------------------- 0
DPO3X_ECOLI 101 VEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHV 150
third 1 -------------------------------------------------- 0
DPO3X_ECOLI 151 KFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP 200
third 1 -------------------------------------------------- 0
DPO3X_ECOLI 201 RALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQAL 250
third 1 -------------------------------------------------- 0
DPO3X_ECOLI 251 SLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300
third 1 -------------------------------------------------- 0
DPO3X_ECOLI 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVE 350
third 1 -------------------------------------------------- 0
DPO3X_ECOLI 351 MTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQA 400
...:|..:.:.|||||||||||||
third 1 ---------------MSYQVLARKWRPVAPTAVMTPTQV----------- 24
DPO3X_ECOLI 401 PTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERL 450
third 25 -------------------------------------------------- 24
DPO3X_ECOLI 451 ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKA 500
third 25 -------------------------------------------------- 24
DPO3X_ECOLI 501 LEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDN 550
third 25 -------------------------------------------------- 24
DPO3X_ECOLI 551 AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600
third 25 -------------------------------------------------- 24
DPO3X_ECOLI 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643
third 25 ------------------------------------------- 24
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