| Header | |||
| Program | needle | ||
| Rundate | Tue Mar 27 2007 18:45:15 | ||
| Align format | srspair | ||
| Report file | temp_job1.needlep | ||
| Results | |||
#=======================================
#
# Aligned_sequences: 2
# 1: IMPA1_HUMAN
# 2: IMPA2_HUMAN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity: 141/274 (51.5%)
# Similarity: 203/274 (74.1%)
# Gaps: 7/274 ( 2.6%)
# Score: 804.0
#
#
#=======================================
IMPA1_HUMAN 1 -WQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKM 49
|:||...||.||.:||:::.:|:..|..|..|:|..||||.||..||.:
IMPA2_HUMAN 1 PWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDL 50
IMPA1_HUMAN 50 LISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFP 99
:||.::|::|||.||.||:.|:|.|.:||.:|||||||||||.|||||||
IMPA2_HUMAN 51 IISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFP 100
IMPA1_HUMAN 100 FVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQED 149
.|||||||||.:::||||:|.|.|.::||.|:|:|||||||:|:||.:.|
IMPA2_HUMAN 101 TVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETD 150
IMPA1_HUMAN 150 ITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLV 199
::|:|::||:|..|.|.|:::.|||||:|.....||:|.:|::.:.:|.:
IMPA2_HUMAN 151 LSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHL 200
IMPA1_HUMAN 200 ATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAA 249
|:|.|||||:.|:||||:|.|.:|:.||||:::|.:|||.|||:.||:||
IMPA2_HUMAN 201 ASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAA 250
IMPA1_HUMAN 250 NNRILAERIAKEIQVIPLQRDDED 273
:.|.:|..||:.:|.|..
IMPA2_HUMAN 251 STREMAMLIAQALQTINY------ 268
|
|||
| Additional Information | |||
| Header | |||
| Program | needle | ||
| Rundate | Tue Mar 27 2007 18:49:55 | ||
| Align format | srspair | ||
| Report file | temp_job2.needlep | ||
| Results | |||
#=======================================
#
# Aligned_sequences: 2
# 1: IMPA1_HUMAN
# 2: SUHB_ECOLI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity: 88/278 (31.7%)
# Similarity: 147/278 (52.9%)
# Gaps: 20/278 ( 7.2%)
# Score: 383.0
#
#
#=======================================
IMPA1_HUMAN 1 WQECMDYAVTLARQAGEVVCEAIK--NEMNVMLKSSPVDLVTATDQKVEK 48
....::.||..||:||.::.:..: :.:....|.|. |.||..|:..|.
SUHB_ECOLI 1 MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSN-DFVTNVDKAAEA 49
IMPA1_HUMAN 49 MLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRF 98
::|.:|::.||.|:.|.||| ||......:..|:|||:||||||:.|.
SUHB_ECOLI 50 VIIDTIRKSYPQHTIITEES---GELEGTDQDVQWVIDPLDGTTNFIKRL 96
IMPA1_HUMAN 99 PFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQE 148
|..||||...:..:.|..|||..:..:::||.:|:||..||.:|:.|...
SUHB_ECOLI 97 PHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTAR 146
IMPA1_HUMAN 149 DITKSLLVTELGSSRTPETVRMVLSNMEKLF--CIPVHGIRSVGTAAVNM 196
|:..::|.|.. ..:..:.....::.:.||| |. ..|..|:||:::
SUHB_ECOLI 147 DLDGTILATGF-PFKAKQYATTYINIVGKLFNECA---DFRRTGSAALDL 192
IMPA1_HUMAN 197 CLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRV 246
..||.|..|.::|:|:..||.|...::|.||||::.|.|||...:::..:
SUHB_ECOLI 193 AYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNI 242
IMPA1_HUMAN 247 IAANNRILAERIAKEIQVIPLQRDDED- 273
:|.|.|::...:|. .||:..
SUHB_ECOLI 243 VAGNPRVVKAMLAN-------MRDELSD 263
|
|||
| Additional Information | |||
| Header | |||
| Program | needle | ||
| Rundate | Tue Mar 27 2007 18:51:05 | ||
| Align format | srspair | ||
| Report file | temp_job3.needlep | ||
| Results | |||
#=======================================
#
# Aligned_sequences: 2
# 1: IMPA1_HUMAN
# 2: SUHB_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity: 70/292 (24.0%)
# Similarity: 126/292 (43.2%)
# Gaps: 63/292 (21.6%)
# Score: 223.5
#
#
#=======================================
IMPA1_HUMAN 1 -WQECMDYAVTLARQAGEVVCEAIKNEM---------NVMLKSSPVDLVT 40
|.| .|:.:.:.|:.|: :.::.:|| :
SUHB_METJA 1 KWDE-----------IGKNIAKEIEKEILPYFGRKDKSYVVGTSP----S 35
IMPA1_HUMAN 41 ATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTW--IIDPI 88
..:.::...:...|..||.....: ::.:.|..::.::..| :||||
SUHB_METJA 36 GDETEIFDKISEDIALKYLKSLNV---NIVSEELGVIDNSSEWTVVIDPI 82
IMPA1_HUMAN 89 DGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCN 138
||:.||::..||.|...|...|.:..:|:.|..:....|.|.|||||:.|
SUHB_METJA 83 DGSFNFINGIPFFAFCFGVFKNNEPYYGLTYEFLTKSFYEAYKGKGAYLN 132
IMPA1_HUMAN 139 GQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRS 188
|:|::| :|...:.:|.....|:. .::||| ...|..:|.
SUHB_METJA 133 GRKIKV---KDFNPNNIVISYYPSKK--------IDLEKL-RNKVKRVRI 170
IMPA1_HUMAN 189 VGTAAVNMCLVATGGADAYYEM--GIHCWDVAGAGIIVTEAGGVLMDVTG 236
.|...:.||.||.|..||.::: .:...|:|.:.||..|||.::.|..|
SUHB_METJA 171 FGAFGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENG 220
IMPA1_HUMAN 237 G--PFDLMSR---RVIAANNRILAERIAKEIQVIPLQRDDED 273
. .|||.:. .:|.||::.:.:.|.
SUHB_METJA 221 DELKFDLNATDRLNIIVANSKEMLDIIL-------------- 248
|
|||
| Additional Information | |||
| Header | |||
| Program | needle | ||
| Rundate | Tue Mar 27 2007 18:52:09 | ||
| Align format | srspair | ||
| Report file | temp_job4.needlep | ||
| Results | |||
#=======================================
#
# Aligned_sequences: 2
# 1: IMPA2_HUMAN
# 2: SUHB_ECOLI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity: 88/272 (32.4%)
# Similarity: 134/272 (49.3%)
# Gaps: 13/272 ( 4.8%)
# Score: 359.0
#
#
#=======================================
IMPA2_HUMAN 1 PWEECFQAAVQLALRAGQIIRKAL-TEEKRVSTKTSAADLVTETDHLVED 49
.......||:.|.:||.:|.|.. |.:...:::..:.|.||..|...|.
SUHB_ECOLI 1 -MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEA 49
IMPA2_HUMAN 50 LIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRF 99
:||..:|:.:|.|..|.|| ||..........|:|||:|||.||:.|.
SUHB_ECOLI 50 VIIDTIRKSYPQHTIITEE---SGELEGTDQDVQWVIDPLDGTTNFIKRL 96
IMPA2_HUMAN 100 PTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGET 149
|..||||...::...|..|:|......|:|..||:||..||.|||.|...
SUHB_ECOLI 97 PHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTAR 146
IMPA2_HUMAN 150 DLSKALVLTEIGPKRDPATLKLFLS---NMERLLHAKAHGVRVIGSSTLA 196
||...::.|.. |...|.:.: |:...|..:....|..||:.|.
SUHB_ECOLI 147 DLDGTILATGF-----PFKAKQYATTYINIVGKLFNECADFRRTGSAALD 191
IMPA2_HUMAN 197 LCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACR 246
|.::|:|..|.:::.||..||.||..:::|||||||.|.:||...::...
SUHB_ECOLI 192 LAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGN 241
IMPA2_HUMAN 247 VVAASTREMAMLIAQALQTINY 268
:||.:.|.:..::|.....::.
SUHB_ECOLI 242 IVAGNPRVVKAMLANMRDELSD 263
|
|||
| Additional Information | |||
| Header | |||
| Program | needle | ||
| Rundate | Tue Mar 27 2007 18:53:50 | ||
| Align format | srspair | ||
| Report file | temp_job5.needlep | ||
| Results | |||
#=======================================
#
# Aligned_sequences: 2
# 1: IMPA2_HUMAN
# 2: SUHB_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity: 72/288 (25.0%)
# Similarity: 130/288 (45.1%)
# Gaps: 59/288 (20.5%)
# Score: 231.5
#
#
#=======================================
IMPA2_HUMAN 1 -PWEECFQAAVQLALRAGQIIRKALTEE---------KRVSTKTSAADLV 40
.|:| .|:.|.|.:.:| |.....||.:...
SUHB_METJA 1 MKWDE-----------IGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDE 39
IMPA2_HUMAN 41 TET-DHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTW--IID 87
||. |.:.||:.:..|:.. :...::||.. |:.:|..| :||
SUHB_METJA 40 TEIFDKISEDIALKYLKSL--NVNIVSEELG------VIDNSSEWTVVID 81
IMPA2_HUMAN 88 PIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAF 137
||||:.||::..|..|...|.....|..:|:.|....:..|...:|:||:
SUHB_METJA 82 PIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTYEFLTKSFYEAYKGKGAY 131
IMPA2_HUMAN 138 CNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGV 187
.||::::|. |.:...::....|.: |: ::|:|.: |...|
SUHB_METJA 132 LNGRKIKVK---DFNPNNIVISYYPSK-----KI---DLEKLRN-KVKRV 169
IMPA2_HUMAN 188 RVIGSSTLALCHLASGAADAYYQF--GLHCWDLAAATVIIREAGGIVIDT 235
|:.|:..|.:|::|.|..||.:.. .:...|:|::.:|.:|||.::.|.
SUHB_METJA 170 RIFGAFGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDE 219
IMPA2_HUMAN 236 SGGPL--DLMA---CRVVAASTREMAMLIAQALQTINY 268
:|..| ||.| ..::.|:::||..:|.
SUHB_METJA 220 NGDELKFDLNATDRLNIIVANSKEMLDIIL-------- 249
|
|||
| Additional Information | |||
| Header | |||
| Program | needle | ||
| Rundate | Tue Mar 27 2007 18:55:23 | ||
| Align format | srspair | ||
| Report file | temp_job6.needlep | ||
| Results | |||
#=======================================
#
# Aligned_sequences: 2
# 1: SUHB_ECOLI
# 2: SUHB_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity: 66/280 (23.6%)
# Similarity: 113/280 (40.4%)
# Gaps: 49/280 (17.5%)
# Score: 197.0
#
#
#=======================================
SUHB_ECOLI 1 MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAV 50
...:.|..|||..|........:|..:..|.......|..
SUHB_METJA 1 ----------KWDEIGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETE 40
SUHB_ECOLI 51 IIDTIRKSYP-------QHTIITEESGELEGTDQDVQW--VIDPLDGTTN 91
|.|.|.:... ...|::||.|.: |...:| ||||:||:.|
SUHB_METJA 41 IFDKISEDIALKYLKSLNVNIVSEELGVI---DNSSEWTVVIDPIDGSFN 87
SUHB_ECOLI 92 FIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLR 141
||..:|.||....|.........:.|:.:....:.|.:|:||.|||.:::
SUHB_METJA 88 FINGIPFFAFCFGVFKNNEPYYGLTYEFLTKSFYEAYKGKGAYLNGRKIK 137
SUHB_ECOLI 142 GSTARDLD-GTILATGFPFKAKQYATTYINIVGKLFNECADFRRTGSAAL 190
.:|.: ..|:.:.:|.|... :.||.|:....|..|:..|
SUHB_METJA 138 ---VKDFNPNNIVISYYPSKKID--------LEKLRNKVKRVRIFGAFGL 176
SUHB_ECOLI 191 DLAYVAAGRVDGFFEI--GLRPWDFAAGELLVREAGGIVSDFTGGH-NYM 237
::.|||.|.:|..|:: .:|..|.|:..::.:|||.:::|..|.. .:.
SUHB_METJA 177 EMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFD 226
SUHB_ECOLI 238 LTG----NIVAGNPRVVKAMLANMRDELSD 263
|.. ||:..|.:.:..::.
SUHB_METJA 227 LNATDRLNIIVANSKEMLDIIL-------- 248
|
|||
| Additional Information | |||