FastQCFastQC Report
Mon 14 Dec 2020
trim_u2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenametrim_u2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences659625
Sequences flagged as poor quality0
Sequence length50-75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)