RID: AE2DMD3E016 Job Title:>Guanine-N7 methyltransferase PRO_0000037320 Program: BLASTP Query: >Guanine-N7 methyltransferase PRO_0000037320 ID: lcl|Query_24254(amino acid) Length: 527 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Max Total Query E Per. Description Score Score cover Value Ident Accession RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 1135 1135 100% 0.0 100.00 P0C6X7.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 1130 1130 100% 0.0 99.24 P0C6W6.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 1118 1118 100% 0.0 98.29 P0C6V9.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 1118 1118 100% 0.0 98.10 P0C6W2.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 717 717 100% 0.0 62.38 K9N7C7.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 716 716 100% 0.0 62.19 P0C6W4.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 712 712 100% 0.0 62.38 P0C6W1.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 711 711 100% 0.0 62.19 P0C6W3.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 679 679 100% 0.0 59.93 P0C6W5.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 672 672 99% 0.0 58.21 P0C6X8.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 668 668 99% 0.0 58.02 P0C6X9.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 666 666 99% 0.0 57.82 P0C6W8.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 666 666 99% 0.0 57.82 P0C6W7.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 661 661 99% 0.0 57.44 P0C6X6.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 660 660 99% 0.0 57.44 P0C6X0.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 658 658 99% 0.0 57.82 P0C6Y0.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 658 658 99% 0.0 57.25 P0C6X2.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 658 658 99% 0.0 57.25 P0C6X4.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 658 658 99% 0.0 57.25 P0C6W9.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 657 657 99% 0.0 58.02 P0C6X3.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 592 592 99% 0.0 52.38 P0C6Y3.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 590 590 99% 0.0 52.19 P0C6Y1.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 590 590 99% 0.0 52.19 P0C6Y2.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 566 566 98% 2e-180 53.85 Q98VG9.2 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 566 566 98% 3e-180 53.65 P0C6Y5.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 563 563 100% 3e-179 52.08 P0C6X1.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 561 561 98% 1e-178 51.64 P0C6Y4.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 559 559 100% 5e-178 52.64 P0C6X5.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 558 558 98% 1e-177 51.64 P0C6W0.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 52.4 52.4 18% 9e-06 34.65 P0C6V8.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 52.0 52.0 19% 1e-05 33.93 Q008X6.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... 50.1 50.1 18% 5e-05 35.92 P0C6V7.1 RecName: Full=Nucleoprotein; AltName: Full=Nucleocapsid protei... 34.7 34.7 18% 1.3 28.57 P36294.1 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;... 34.3 34.3 7% 2.6 45.95 A8GAD4.1 RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName:... 33.5 33.5 19% 4.5 28.57 A2YII8.1 RecName: Full=Multiple epidermal growth factor-like domains... 33.9 33.9 15% 5.0 27.91 Q7Z7M0.2 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;... 33.1 33.1 7% 5.2 45.95 Q6D1I4.1 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;... 33.1 33.1 7% 5.7 45.95 P17857.1 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;... 32.7 32.7 7% 7.8 45.95 C6DCX4.1 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;... 32.7 32.7 7% 8.4 45.95 A4TPK0.1 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;... 32.7 32.7 7% 8.6 45.95 A7FLI1.1 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;... 32.3 32.3 7% 9.2 45.95 A1JNX6.1 RecName: Full=Ubiquinone/menaquinone biosynthesis... 32.0 32.0 7% 9.5 35.71 Q7W0H1.1 RecName: Full=Baeyer-Villiger monooxygenase; Short=BVMO... 32.7 32.7 16% 9.6 31.18 Q9RL17.1 RecName: Full=Transmembrane 9 superfamily member 5; AltName:... 32.3 32.3 15% 10.0 28.24 F4HW17.1 Alignments: >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO; AltName: Full=SARS coronavirus main proteinase; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Severe acute respiratory syndrome-related coronavirus] Sequence ID: P0C6X7.1 Length: 7073 Range 1: 5903 to 6429 Score:1135 bits(2936), Expect:0.0, Method:Compositional matrix adjust., Identities:527/527(100%), Positives:527/527(100%), Gaps:0/527(0%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGF 60 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGF Sbjct 5903 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGF 5962 Query 61 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV 120 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV Sbjct 5963 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV 6022 Query 121 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR 180 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR Sbjct 6023 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR 6082 Query 181 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF 240 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF Sbjct 6083 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF 6142 Query 241 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG 300 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG Sbjct 6143 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG 6202 Query 301 DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKA 360 DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKA Sbjct 6203 DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKA 6262 Query 361 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY 420 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY Sbjct 6263 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY 6322 Query 421 VNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG 480 VNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG Sbjct 6323 VNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG 6382 Query 481 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ Sbjct 6383 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 6429 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Bat SARS CoV Rp3/2004] Sequence ID: P0C6W6.1 Length: 7071 Range 1: 5901 to 6427 Score:1130 bits(2924), Expect:0.0, Method:Compositional matrix adjust., Identities:523/527(99%), Positives:526/527(99%), Gaps:0/527(0%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGF 60 AENVTGLFKDCSKIITGLHPTQAPTHLSVD KFKTEGLCVDIPGIPKDMTYRRLISMMGF Sbjct 5901 AENVTGLFKDCSKIITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGF 5960 Query 61 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV 120 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA+ Sbjct 5961 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAI 6020 Query 121 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR 180 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR Sbjct 6021 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR 6080 Query 181 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF 240 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF Sbjct 6081 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF 6140 Query 241 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG 300 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG Sbjct 6141 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG 6200 Query 301 DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKA 360 DEL++NSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKA Sbjct 6201 DELKINSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKA 6260 Query 361 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY 420 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY Sbjct 6261 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY 6320 Query 421 VNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG 480 VNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG Sbjct 6321 VNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG 6380 Query 481 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ Sbjct 6381 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 6427 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Bat CoV 279/2005] Sequence ID: P0C6V9.1 Length: 7079 Range 1: 5909 to 6435 Score:1118 bits(2892), Expect:0.0, Method:Compositional matrix adjust., Identities:518/527(98%), Positives:523/527(99%), Gaps:0/527(0%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGF 60 AENVTGLFKDCSKIITGLHPTQAPTHLSVD KFKTEGLCVDIPGIPKDMTYRRLISMMGF Sbjct 5909 AENVTGLFKDCSKIITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGF 5968 Query 61 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV 120 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV Sbjct 5969 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV 6028 Query 121 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR 180 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR Sbjct 6029 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR 6088 Query 181 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF 240 VVFVLWAHGFELTSMKYFVKIGPERTCCLCD+RATCFSTSSDTYACWNHSVGFDYVYNPF Sbjct 6089 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRATCFSTSSDTYACWNHSVGFDYVYNPF 6148 Query 241 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG 300 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG Sbjct 6149 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG 6208 Query 301 DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKA 360 DEL++N+ACRKVQHMVVKSALLADKF VLHDIGNPKAIKCVPQAEV+WKFYDAQPCSDKA Sbjct 6209 DELKINAACRKVQHMVVKSALLADKFSVLHDIGNPKAIKCVPQAEVDWKFYDAQPCSDKA 6268 Query 361 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY 420 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY Sbjct 6269 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY 6328 Query 421 VNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG 480 VNKHAFHTPAFDKSAFT LKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG Sbjct 6329 VNKHAFHTPAFDKSAFTYLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG 6388 Query 481 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 GAVCR HANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ Sbjct 6389 GAVCRRHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 6435 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Bat SARS coronavirus HKU3] Sequence ID: P0C6W2.1 Length: 7067 Range 1: 5897 to 6423 Score:1118 bits(2891), Expect:0.0, Method:Compositional matrix adjust., Identities:517/527(98%), Positives:525/527(99%), Gaps:0/527(0%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGF 60 AENVTGLFKDCSKIITGLHPTQAPTHLSVD KFKTEGLCVDIPGIPKDMTYRRLISMMGF Sbjct 5897 AENVTGLFKDCSKIITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGF 5956 Query 61 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV 120 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV Sbjct 5957 KMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAV 6016 Query 121 PTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR 180 PTGYVDTEN+TEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR Sbjct 6017 PTGYVDTENSTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDR 6076 Query 181 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF 240 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF Sbjct 6077 VVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPF 6136 Query 241 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG 300 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG Sbjct 6137 MIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG 6196 Query 301 DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKA 360 DEL++N+ACRKVQHMVVKSALLADKF VLHDIGNPKAI+CVPQAEV+WKFYDAQPCSDKA Sbjct 6197 DELKINAACRKVQHMVVKSALLADKFTVLHDIGNPKAIRCVPQAEVDWKFYDAQPCSDKA 6256 Query 361 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY 420 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY Sbjct 6257 YKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLY 6316 Query 421 VNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG 480 VNKHAFHTPAFDKSAFT+LKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG Sbjct 6317 VNKHAFHTPAFDKSAFTHLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLG 6376 Query 481 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFT+LQ Sbjct 6377 GAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTKLQ 6423 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Betacoronavirus England 1] Sequence ID: K9N7C7.1 Length: 7078 Range 1: 5909 to 6432 Score:717 bits(1851), Expect:0.0, Method:Compositional matrix adjust., Identities:330/529(62%), Positives:409/529(77%), Gaps:7/529(1%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMG 59 ++ VTGLFKDCS+ +GL P APT++SVD K+KT + LCV++ +P ++ Y R+IS MG Sbjct 5909 SQIVTGLFKDCSRETSGLSPAYAPTYVSVDDKYKTSDELCVNL-NLPANVPYSRVISRMG 5967 Query 60 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA 119 FK++ V GYP +FITREEA+R VR+WIGFDVEG HA+R+A GTN+PLQLGFSTGVN V Sbjct 5968 FKLDATVPGYPKLFITREEAVRQVRSWIGFDVEGAHASRNACGTNVPLQLGFSTGVNFVV 6027 Query 120 VPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSD 179 P G VDTE T + A+PPPG+QFKHL+PLM+KG W +VR +IVQMLSDTL LSD Sbjct 6028 QPVGVVDTEWGNMLTGIAARPPPGEQFKHLVPLMHKGAAWPIVRRRIVQMLSDTLDKLSD 6087 Query 180 RVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNP 239 FV WAHGFELTS YF KIG E+ CC+C++RA +S+ +YACW HS G+DYVYNP Sbjct 6088 YCTFVCWAHGFELTSASYFCKIGKEQKCCMCNRRAAAYSSPLQSYACWTHSCGYDYVYNP 6147 Query 240 FMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPII 299 F +DVQQWG+ GNL +NHD++C VH AHVAS DAIMTRCLA+H CF++RVDW +EYP I Sbjct 6148 FFVDVQQWGYVGNLATNHDRYCSVHQGAHVASNDAIMTRCLAIHSCFIERVDWDIEYPYI 6207 Query 300 GDELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDK 359 E ++NS CR V+ VV++ALLA F ++DIGNPK I V V+W ++DAQP + Sbjct 6208 SHEKKLNSCCRIVERNVVRAALLAGSFDKVYDIGNPKGIPIVDDPVVDWHYFDAQPLTR- 6266 Query 360 AYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSL 419 K+++LFY+ +F DG+CLFWNCNV +YP NAIVCRFDTRV S NLPGCDGGSL Sbjct 6267 --KVQQLFYT-EDMASRFADGLCLFWNCNVPKYPNNAIVCRFDTRVHSEFNLPGCDGGSL 6323 Query 420 YVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGK-QVVSDIDYVPLKSATCITRCN 478 YVNKHAFHTPA+D SAF +LK LPFFYYS +PCE HG ++ DIDYVPLKSA CIT CN Sbjct 6324 YVNKHAFHTPAYDVSAFRDLKPLPFFYYSTTPCEVHGNGSMIEDIDYVPLKSAVCITACN 6383 Query 479 LGGAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 LGGAVCR HA EYR+Y++AYN++ ++GF LW YK FD YNLW+TFT++Q Sbjct 6384 LGGAVCRKHATEYREYMEAYNLVSASGFRLWCYKTFDIYNLWSTFTKVQ 6432 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Pipistrellus bat coronavirus HKU5] Sequence ID: P0C6W4.1 Length: 7182 Range 1: 6000 to 6523 Score:716 bits(1849), Expect:0.0, Method:Compositional matrix adjust., Identities:329/529(62%), Positives:412/529(77%), Gaps:7/529(1%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMG 59 ++ VTGL+KDCS+ +GLHP APT++SVD K+KT + LCV++ +P ++ Y R+IS MG Sbjct 6000 SQIVTGLYKDCSRESSGLHPAYAPTYVSVDDKYKTSDELCVNL-NVPANVPYSRVISRMG 6058 Query 60 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA 119 FK++ + YP +FITR+EAIR VR+WIGFDVEG HA+R+A GTN+PLQLGFSTGVN V Sbjct 6059 FKLDASIPNYPKLFITRDEAIRQVRSWIGFDVEGAHASRNACGTNVPLQLGFSTGVNFVV 6118 Query 120 VPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSD 179 P G VDTE + T + A+PPPG+QFKHL+PLM KG W +VR +IVQMLSDTL LSD Sbjct 6119 QPVGVVDTEWGSMLTSIAARPPPGEQFKHLVPLMNKGAAWPIVRRRIVQMLSDTLDKLSD 6178 Query 180 RVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNP 239 FV WAHGFELTS YF KIG E+ CC+C++RA+ +S+ +YACW+HS G+DYVYNP Sbjct 6179 YCTFVCWAHGFELTSASYFCKIGKEQRCCMCNRRASTYSSPLHSYACWSHSSGYDYVYNP 6238 Query 240 FMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPII 299 F +DVQQWG+ GNL +NHD++C VH AHVAS DA+MTRCLA+H+CF++RV+W + YP I Sbjct 6239 FFVDVQQWGYIGNLATNHDRYCSVHQGAHVASNDAVMTRCLAIHDCFIERVEWDITYPYI 6298 Query 300 GDELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDK 359 E R+NS CR V+ VV++ALLA +F ++DIGNPK I V V+W +YDAQP S Sbjct 6299 SHEKRLNSCCRAVERNVVRAALLAGRFERVYDIGNPKGIPIVDDPVVDWHYYDAQPLSK- 6357 Query 360 AYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSL 419 K+++LFY+ + F+DG+CLFWNCNV RYP NAIVCRFDTRV S NLPGCDGGSL Sbjct 6358 --KVQQLFYTEDCAKN-FSDGLCLFWNCNVPRYPNNAIVCRFDTRVHSEFNLPGCDGGSL 6414 Query 420 YVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGK-QVVSDIDYVPLKSATCITRCN 478 YVNKHAFHTPA+D SAF +LK LPFFYYS +PCE HG ++ DIDYVPLKSA CIT CN Sbjct 6415 YVNKHAFHTPAYDASAFRDLKPLPFFYYSTTPCEVHGNGNMLEDIDYVPLKSAVCITACN 6474 Query 479 LGGAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 LGGAVCR HA EYR Y++AYN++ ++GF LW YK FD YNLW+TFT++Q Sbjct 6475 LGGAVCRKHAAEYRDYMEAYNLVSASGFRLWCYKTFDVYNLWSTFTKIQ 6523 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Bat coronavirus (BtCoV/133/2005)] Sequence ID: P0C6W1.1 Length: 7126 Range 1: 5960 to 6482 Score:712 bits(1838), Expect:0.0, Method:Compositional matrix adjust., Identities:330/529(62%), Positives:413/529(78%), Gaps:8/529(1%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMG 59 ++ VTGLFKDCS+ GL P APT+LSVD K+KT + LCV++ I ++TY R+IS MG Sbjct 5960 SQIVTGLFKDCSREDVGLPPAYAPTYLSVDAKYKTTDELCVNL-NITPNVTYSRVISRMG 6018 Query 60 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA 119 FK++ + GYP +FITR+EAIR VR+WIGFDVEG HA+R+A GTN+PLQLGFSTGVN V Sbjct 6019 FKLDATIPGYPKLFITRDEAIRQVRSWIGFDVEGAHASRNACGTNVPLQLGFSTGVNFVV 6078 Query 120 VPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSD 179 P G VDTE + T ++A+PPPG+QFKHL+PLM KG W +VR +IVQMLSDTL LSD Sbjct 6079 QPVGVVDTEWGSMLTTISARPPPGEQFKHLVPLMNKGATWPIVRRRIVQMLSDTLDKLSD 6138 Query 180 RVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNP 239 FV WAHGFELTS YF KIG E+ CC+C +RA+ FS+ +YACW+HS G+DYVYNP Sbjct 6139 YCTFVCWAHGFELTSASYFCKIGKEQRCCMCSRRASTFSSPLQSYACWSHSSGYDYVYNP 6198 Query 240 FMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPII 299 F +DVQQWG+ GNL +NHD++C +H AHVAS DAIMTRCLA+++CF++RVDW V YP I Sbjct 6199 FFVDVQQWGYVGNLATNHDRYCGIHAGAHVASSDAIMTRCLAIYDCFIERVDWDVTYPYI 6258 Query 300 GDELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDK 359 E ++NS CR V+ VV+SA+L+ KF ++DIGNPK I + + VEW FYDAQP S+ Sbjct 6259 SHEQKLNSCCRTVERNVVRSAVLSGKFDKIYDIGNPKGIPIISEP-VEWHFYDAQPLSN- 6316 Query 360 AYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSL 419 K+++LFY+ +F DG+CLFWNCNV +YP+NA+VCRFDTRV S NLPGC+GGSL Sbjct 6317 --KVKKLFYTDDVAK-QFEDGLCLFWNCNVSKYPSNAVVCRFDTRVHSEFNLPGCNGGSL 6373 Query 420 YVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGK-QVVSDIDYVPLKSATCITRCN 478 YVNKHAFHTPA+D +AF +LK LPFFYYS +PCE HG ++ DIDYVPLKSA CIT CN Sbjct 6374 YVNKHAFHTPAYDINAFRDLKPLPFFYYSTTPCEVHGSGNMLEDIDYVPLKSAVCITACN 6433 Query 479 LGGAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 LGGAVCR HA EYR Y++AYN++ +AGF LW+YK FD YNLW+TF ++Q Sbjct 6434 LGGAVCRKHAAEYRDYMEAYNIVSAAGFRLWVYKTFDIYNLWSTFVKVQ 6482 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Tylonycteris bat coronavirus HKU4] Sequence ID: P0C6W3.1 Length: 7119 Range 1: 5953 to 6475 Score:711 bits(1834), Expect:0.0, Method:Compositional matrix adjust., Identities:329/529(62%), Positives:413/529(78%), Gaps:8/529(1%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMG 59 ++ VTGLFKDCS+ TGL P APT+LSVD K+KT + LCV++ I ++TY R+IS MG Sbjct 5953 SQIVTGLFKDCSREDTGLPPAYAPTYLSVDAKYKTTDELCVNL-NITPNVTYSRVISRMG 6011 Query 60 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA 119 FK++ + GYP +FITR+EAIR VR+W+GFDVEG HA+R+A GTN+PLQLGFSTGVN V Sbjct 6012 FKLDATIPGYPKLFITRDEAIRQVRSWVGFDVEGAHASRNACGTNVPLQLGFSTGVNFVV 6071 Query 120 VPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSD 179 P G VDTE + T ++A+PPPG+QFKHL+PLM KG W +VR +IVQMLSDTL LSD Sbjct 6072 QPVGVVDTEWGSMLTTISARPPPGEQFKHLVPLMNKGATWPIVRRRIVQMLSDTLDKLSD 6131 Query 180 RVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNP 239 FV WAHGFELTS YF KIG E+ C +C +RA+ FS+ +YACW+HS G+DYVYNP Sbjct 6132 YCTFVCWAHGFELTSASYFCKIGKEQRCSMCSRRASTFSSPLQSYACWSHSSGYDYVYNP 6191 Query 240 FMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPII 299 F +DVQQWG+ GNL +NHD++C +H AHVAS DAIMTRCLA+++CF++RVDW V YP I Sbjct 6192 FFVDVQQWGYVGNLATNHDRYCGIHAGAHVASSDAIMTRCLAIYDCFIERVDWDVTYPYI 6251 Query 300 GDELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDK 359 E ++NS CR V+ VV+SA+L+ KF ++DIGNPK I + + VEW FYDAQP S+ Sbjct 6252 SHEQKLNSCCRTVERNVVRSAVLSGKFEKIYDIGNPKGIAIISEP-VEWHFYDAQPLSN- 6309 Query 360 AYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSL 419 K+++LFY+ +F DG+CLFWNCNV +YP+NA+VCRFDTRV S NLPGC+GGSL Sbjct 6310 --KVKKLFYTDDVSK-QFEDGLCLFWNCNVSKYPSNAVVCRFDTRVHSEFNLPGCNGGSL 6366 Query 420 YVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGK-QVVSDIDYVPLKSATCITRCN 478 YVNKHAFHTPA+D +AF +LK LPFFYYS +PCE HG ++ DIDYVPLKSA CIT CN Sbjct 6367 YVNKHAFHTPAYDINAFRDLKPLPFFYYSTTPCEVHGSGNMLEDIDYVPLKSAVCITACN 6426 Query 479 LGGAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 LGGAVCR HA EYR Y++AYN++ +AGF LW+YK FD YNLW+TF ++Q Sbjct 6427 LGGAVCRKHAAEYRDYMEAYNIVSAAGFRLWVYKTFDIYNLWSTFVKVQ 6475 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Rousettus bat coronavirus HKU9] Sequence ID: P0C6W5.1 Length: 6930 Range 1: 5767 to 6296 Score:679 bits(1751), Expect:0.0, Method:Compositional matrix adjust., Identities:320/534(60%), Positives:390/534(73%), Gaps:11/534(2%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFK-TEGLCVDIPGIPKDMTYRRLISMMG 59 +E GLFKDC+K L P APT +SV+ KFK E LCV M Y RLIS MG Sbjct 5767 SEVTVGLFKDCAKA-EPLGPAYAPTFVSVNDKFKLNESLCVHFDTTELQMPYNRLISKMG 5825 Query 60 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA 119 FK + + GY +FITRE+AIR VR W+GFDVEG HA +GTNLPLQ+GFSTGVN V Sbjct 5826 FKFDLNIPGYSKLFITREQAIREVRGWVGFDVEGAHACGPNIGTNLPLQIGFSTGVNFVV 5885 Query 120 VPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSD 179 P+GY+DTE+ + V +K PPGDQFKHLIPLM KG PW+VVR +IV+ML DTL G+SD Sbjct 5886 TPSGYIDTESGSRLANVVSKAPPGDQFKHLIPLMRKGEPWSVVRKRIVEMLCDTLDGVSD 5945 Query 180 RVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSV---GFDYV 236 V FV WAHGFELT++ YF K+GPER C +C +RAT FS+ Y+CW+H G D+V Sbjct 5946 TVTFVTWAHGFELTTLHYFAKVGPERKCFMCPRRATLFSSVYGAYSCWSHHRHIGGADFV 6005 Query 237 YNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEY 296 YNPF++DVQQWG+ GNLQ NHD C VH AHVASCDAIMTRCLA+H+CF V+W VEY Sbjct 6006 YNPFLVDVQQWGYVGNLQVNHDNVCDVHKGAHVASCDAIMTRCLAIHDCFCGEVNWDVEY 6065 Query 297 PIIGDELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPC 356 PII +EL +N ACR VQ +V+K+A+ A ++DIGNPKAIK W FYD P Sbjct 6066 PIIANELAINRACRSVQRVVLKAAVKALHIETIYDIGNPKAIKVYGVNVNNWNFYDTNPV 6125 Query 357 SDKAYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDG 416 + +++L Y Y H D+F DG+ +FWNCNVD YP NA+VCRFDTRVLS LNL GC+G Sbjct 6126 VE---GVKQLHYVYDVHRDQFKDGLAMFWNCNVDCYPHNALVCRFDTRVLSKLNLAGCNG 6182 Query 417 GSLYVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESH---GKQVVSDIDYVPLKSATC 473 GSLYVN+HAFHT AF+K+AF NLK LPFFYYSD+ CE+ VS++DYVPLKS C Sbjct 6183 GSLYVNQHAFHTDAFNKNAFVNLKPLPFFYYSDTACENATGVSTNYVSEVDYVPLKSNVC 6242 Query 474 ITRCNLGGAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 ITRCNLGGAVC+ HA+EYR +L++YN M+SAGF+LW+ K FD +NLW+TF +LQ Sbjct 6243 ITRCNLGGAVCKKHADEYRNFLESYNTMVSAGFTLWVDKTFDVFNLWSTFVKLQ 6296 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Murine hepatitis virus strain 2] Sequence ID: P0C6X8.1 Length: 7124 Range 1: 5933 to 6451 Score:672 bits(1733), Expect:0.0, Method:Compositional matrix adjust., Identities:305/524(58%), Positives:389/524(74%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEG-LCVDIPGIPKDMTYRRLISMMGFKMN 63 T LFKDCS+ G HP AP+ L+VD K+K G L V + +TY RLIS+MGFK++ Sbjct 5933 TNLFKDCSRSYAGYHPAHAPSFLAVDDKYKVGGDLAVCLNVADSAVTYSRLISLMGFKLD 5992 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FITR+EAIR VRAW+GFD EG HATRD++GTN PLQLGFSTG++ V TG Sbjct 5993 LTLDGYCKLFITRDEAIRRVRAWVGFDAEGAHATRDSIGTNFPLQLGFSTGIDFVVEATG 6052 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + A+ PPG+QFKHL+PLM +G W+VVRI+IVQMLSD L L+D VV Sbjct 6053 MFAERDGYVFKKAVARAPPGEQFKHLVPLMSRGQKWDVVRIRIVQMLSDHLVDLADSVVL 6112 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 V WA FELT ++YF K+G E C +C+KRATCF++ + Y CW HS DY+YNP ++D Sbjct 6113 VTWAASFELTCLRYFAKVGKEVVCSVCNKRATCFNSRTGYYGCWRHSYSCDYLYNPLIVD 6172 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+TG+L SNHD C VH AHVAS DAIMTRCLAVH+CF K V+WS+EYPII +E+ Sbjct 6173 IQQWGYTGSLTSNHDLICSVHKGAHVASSDAIMTRCLAVHDCFCKSVNWSLEYPIISNEV 6232 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 VN++CR +Q ++ ++A+L +++ V +DIGNPK + CV ++KFYDA P + Sbjct 6233 SVNTSCRLLQRVMFRAAMLCNRYDVCYDIGNPKGLACVKG--YDFKFYDASPV---VKSV 6287 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 ++ Y Y H D+F DG+C+FWNCNVD+YPANA+VCRFDTRVL+ LNLPGC+GGSLYVNK Sbjct 6288 KQFVYKYEAHKDQFLDGLCMFWNCNVDKYPANAVVCRFDTRVLNKLNLPGCNGGSLYVNK 6347 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++AF NLK +PFFYYSD+PC +DYVPL+SATCITRCNLGGAV Sbjct 6348 HAFHTSPFTRAAFENLKPMPFFYYSDTPCVYMEGMESKQVDYVPLRSATCITRCNLGGAV 6407 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA +YR+YL++YN +AGF+ W+YK FD YNLWNTFTRLQ Sbjct 6408 CLKHAEDYREYLESYNTATTAGFTFWVYKTFDFYNLWNTFTRLQ 6451 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Murine hepatitis virus strain A59] Sequence ID: P0C6X9.1 Length: 7176 Range 1: 5985 to 6503 Score:668 bits(1724), Expect:0.0, Method:Compositional matrix adjust., Identities:304/524(58%), Positives:387/524(73%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEG-LCVDIPGIPKDMTYRRLISMMGFKMN 63 T LFKDCS+ G HP AP+ L+VD K+K G L V + +TY RLIS+MGFK++ Sbjct 5985 TNLFKDCSRSYVGYHPAHAPSFLAVDDKYKVGGDLAVCLNVADSAVTYSRLISLMGFKLD 6044 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FITR+EAI+ VRAW+GFD EG HA RD++GTN PLQLGFSTG++ V TG Sbjct 6045 LTLDGYCKLFITRDEAIKRVRAWVGFDAEGAHAIRDSIGTNFPLQLGFSTGIDFVVEATG 6104 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + A+ PPG+QFKHLIPLM +G W+VVRI+IVQMLSD L L+D VV Sbjct 6105 MFAERDGYVFKKAAARAPPGEQFKHLIPLMSRGQKWDVVRIRIVQMLSDHLVDLADSVVL 6164 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 V WA FELT ++YF K+G E C +C KRATCF++ + Y CW HS DY+YNP ++D Sbjct 6165 VTWAASFELTCLRYFAKVGREVVCSVCTKRATCFNSRTGYYGCWRHSYSCDYLYNPLIVD 6224 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+TG+L SNHD C VH AHVAS DAIMTRCLAVH+CF K V+W++EYPII +E+ Sbjct 6225 IQQWGYTGSLTSNHDPICSVHKGAHVASSDAIMTRCLAVHDCFCKSVNWNLEYPIISNEV 6284 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 VN++CR +Q ++ ++A+L +++ V +DIGNPK + CV ++KFYDA P + Sbjct 6285 SVNTSCRLLQRVMFRAAMLCNRYDVCYDIGNPKGLACVKG--YDFKFYDASPV---VKSV 6339 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 ++ Y Y H D+F DG+C+FWNCNVD+YPANA+VCRFDTRVL+ LNLPGC+GGSLYVNK Sbjct 6340 KQFVYKYEAHKDQFLDGLCMFWNCNVDKYPANAVVCRFDTRVLNKLNLPGCNGGSLYVNK 6399 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++AF NLK +PFFYYSD+PC +DYVPL+SATCITRCNLGGAV Sbjct 6400 HAFHTSPFTRAAFENLKPMPFFYYSDTPCVYMEGMESKQVDYVPLRSATCITRCNLGGAV 6459 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EYR+YL++YN +AGF+ W+YK FD YNLWNTFTRLQ Sbjct 6460 CLKHAEEYREYLESYNTATTAGFTFWVYKTFDFYNLWNTFTRLQ 6503 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Bovine respiratory coronavirus (strain 98TXSF-110-LUN)] Sequence ID: P0C6W8.1 Length: 7094 Range 1: 5903 to 6421 Score:666 bits(1719), Expect:0.0, Method:Compositional matrix adjust., Identities:303/524(58%), Positives:390/524(74%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKD-MTYRRLISMMGFKMN 63 T LFKDCSK +G HP AP+ L+VD K+K G GI +TY RLIS+MGFK++ Sbjct 5903 TNLFKDCSKSYSGYHPAHAPSFLAVDDKYKATGDLAVCLGIGDSAVTYSRLISLMGFKLD 5962 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FIT+EEA++ VRAW+GFD EG HATRD++GTN PLQLGFSTG++ V TG Sbjct 5963 VTLDGYCKLFITKEEAVKRVRAWVGFDAEGAHATRDSIGTNFPLQLGFSTGIDFVVEATG 6022 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + AK PPG+QFKHLIPLM +G W+VVR +IVQM +D L LSD VV Sbjct 6023 LFADRDGYSFKKAVAKAPPGEQFKHLIPLMTRGQRWDVVRPRIVQMFADHLIDLSDCVVL 6082 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 V WA FELT ++YF K+G E +C +C KRAT +++ + Y CW HSV DY+YNP ++D Sbjct 6083 VTWAANFELTCLRYFAKVGREISCNVCTKRATAYNSRTGYYGCWRHSVTCDYLYNPLIVD 6142 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+ G+L SNHD +C VH AHVAS DAIMTRCLAV++CF ++W+VEYPII +EL Sbjct 6143 IQQWGYIGSLSSNHDLYCSVHKGAHVASSDAIMTRCLAVYDCFCNNINWNVEYPIISNEL 6202 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 +N++CR +Q +++K+A+L +++ + +DIGNPKAI CV + ++KFYDAQP + Sbjct 6203 SINTSCRVLQRVMLKAAMLCNRYTLCYDIGNPKAIACVK--DFDFKFYDAQPI---VKSV 6257 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 + L YS+ H D F DG+C+FWNCNVD+YP NA+VCRFDTRVL+NLNLPGC+GGSLYVNK Sbjct 6258 KTLLYSFEAHKDSFKDGLCMFWNCNVDKYPPNAVVCRFDTRVLNNLNLPGCNGGSLYVNK 6317 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++AF +LK +PFFYYSD+PC +DYVPLKSATCITRCNLGGAV Sbjct 6318 HAFHTKPFSRAAFEHLKPMPFFYYSDTPCVYMDGMDAKQVDYVPLKSATCITRCNLGGAV 6377 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EYR+YL++YN +AGF+ W+YK FD YNLWNTFT+LQ Sbjct 6378 CLKHAEEYREYLESYNTATTAGFTFWVYKTFDFYNLWNTFTKLQ 6421 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Bovine enteric coronavirus (strain 98TXSF-110-ENT)] Sequence ID: P0C6W7.1 Length: 7094 Range 1: 5903 to 6421 Score:666 bits(1718), Expect:0.0, Method:Compositional matrix adjust., Identities:303/524(58%), Positives:390/524(74%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKD-MTYRRLISMMGFKMN 63 T LFKDCSK +G HP AP+ L+VD K+K G GI +TY RLIS+MGFK++ Sbjct 5903 TNLFKDCSKSYSGYHPAHAPSFLAVDDKYKATGDLAVCLGIGDSAVTYSRLISLMGFKLD 5962 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FIT+EEA++ VRAW+GFD EG HATRD++GTN PLQLGFSTG++ V TG Sbjct 5963 VTLDGYCKLFITKEEAVKRVRAWVGFDAEGAHATRDSIGTNFPLQLGFSTGIDFVVEATG 6022 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + AK PPG+QFKHLIPLM +G W+VVR +IVQM +D L LSD VV Sbjct 6023 LFADRDGYSFKKAVAKAPPGEQFKHLIPLMTRGQRWDVVRPRIVQMFADHLIDLSDCVVL 6082 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 V WA FELT ++YF K+G E +C +C KRAT +++ + Y CW HSV DY+YNP ++D Sbjct 6083 VTWAANFELTCLRYFAKVGREISCNVCTKRATAYNSRTGYYGCWRHSVTCDYLYNPLIVD 6142 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+ G+L SNHD +C VH AHVAS DAIMTRCLAV++CF ++W+VEYPII +EL Sbjct 6143 IQQWGYIGSLSSNHDLYCSVHKGAHVASSDAIMTRCLAVYDCFCNNINWNVEYPIISNEL 6202 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 +N++CR +Q +++K+A+L +++ + +DIGNPKAI CV + ++KFYDAQP + Sbjct 6203 SINTSCRVLQRVMLKAAMLCNRYTLCYDIGNPKAIACVK--DFDFKFYDAQPI---VKSV 6257 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 + L YS+ H D F DG+C+FWNCNVD+YP NA+VCRFDTRVL+NLNLPGC+GGSLYVNK Sbjct 6258 KTLLYSFEAHKDSFKDGLCMFWNCNVDKYPPNAVVCRFDTRVLNNLNLPGCNGGSLYVNK 6317 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++AF +LK +PFFYYSD+PC +DYVPLKSATCITRCNLGGAV Sbjct 6318 HAFHTKPFSRAAFEHLKPMPFFYYSDTPCVYMDGMDAKQVDYVPLKSATCITRCNLGGAV 6377 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EYR+YL++YN +AGF+ W+YK FD YNLWNTFT+LQ Sbjct 6378 CLKHAEEYREYLESYNTATTAGFTFWVYKTFDFYNLWNTFTKLQ 6421 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Human coronavirus OC43] Sequence ID: P0C6X6.1 Length: 7095 Range 1: 5903 to 6421 Score:661 bits(1706), Expect:0.0, Method:Compositional matrix adjust., Identities:301/524(57%), Positives:388/524(74%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKD-MTYRRLISMMGFKMN 63 T LFKDCSK +G HP AP+ L+VD K+K G GI +TY RLIS+MGFK++ Sbjct 5903 TNLFKDCSKSYSGYHPAHAPSFLAVDDKYKATGDLAVCLGIGDSAVTYSRLISLMGFKLD 5962 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FIT+EEA++ VRAW+GFD EG HAT D++GTN PLQLGFSTG++ V TG Sbjct 5963 VTLDGYCKLFITKEEAVKRVRAWVGFDAEGAHATLDSIGTNFPLQLGFSTGIDFVVEATG 6022 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + AK PPG+QFKHLIPLM +G W+VVR +IVQM +D L LSD VV Sbjct 6023 LFADRDGYSFKKAVAKAPPGEQFKHLIPLMTRGHRWDVVRPRIVQMFADHLIDLSDCVVL 6082 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 V WA FELT ++YF K+G E +C +C KRAT +++ + Y CW HSV DY+YNP ++D Sbjct 6083 VTWAANFELTCLRYFAKVGREISCNVCTKRATVYNSRTGYYGCWRHSVTCDYLYNPLIVD 6142 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+ G+L SNHD +C VH AHVAS DAIMTRCLAV++CF ++W+VEYPII +EL Sbjct 6143 IQQWGYIGSLSSNHDLYCSVHKGAHVASSDAIMTRCLAVYDCFCNNINWNVEYPIISNEL 6202 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 +N++CR +Q +++K+A+L +++ + +DIGNPK I CV + ++KFYDAQP + Sbjct 6203 SINTSCRVLQRVILKAAMLCNRYTLCYDIGNPKGIACVK--DFDFKFYDAQPI---VKSV 6257 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 + L YS+ H D F DG+C+FWNCNVD+YP NA+VCRFDTRVL+NLNLPGC+GGSLYVNK Sbjct 6258 KTLLYSFEAHKDSFKDGLCMFWNCNVDKYPPNAVVCRFDTRVLNNLNLPGCNGGSLYVNK 6317 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++AF +LK +PFFYYSD+PC +DYVPLKSATCITRCNLGGAV Sbjct 6318 HAFHTKPFARAAFEHLKPMPFFYYSDTPCVYMDGMDAKQVDYVPLKSATCITRCNLGGAV 6377 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EYR+YL++YN +AGF+ W+YK FD YNLWNTFT+LQ Sbjct 6378 CLKHAEEYREYLESYNTATTAGFTFWVYKTFDFYNLWNTFTKLQ 6421 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Bovine coronavirus strain Quebec] Sequence ID: P0C6X0.1 Length: 7059 Range 1: 5903 to 6421 Score:660 bits(1702), Expect:0.0, Method:Compositional matrix adjust., Identities:301/524(57%), Positives:388/524(74%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKD-MTYRRLISMMGFKMN 63 T LFKDCSK +G HP AP+ L+VD K+K G GI +TY RLIS+MGFK++ Sbjct 5903 TNLFKDCSKSYSGYHPAHAPSFLAVDDKYKATGDLAVCLGIGDSAVTYSRLISLMGFKLD 5962 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FIT+EEA++ VRAW+GFD EG HATRD++GTN PLQLGFSTG++ V TG Sbjct 5963 VTLDGYCKLFITKEEAVKRVRAWVGFDAEGAHATRDSIGTNFPLQLGFSTGIDFVVEATG 6022 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + AK PPG+QFKHLIPLM +G W+VVR +IVQM +D L LSD VV Sbjct 6023 LFADRDGYSFKKAVAKAPPGEQFKHLIPLMTRGQRWDVVRPRIVQMFADHLIDLSDCVVL 6082 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 V WA FELT ++YF K+G E +C + KRAT +++ + Y CW HSV DY+YNP ++D Sbjct 6083 VTWAANFELTCLRYFAKVGREISCNVSTKRATAYNSRTGYYGCWRHSVTCDYLYNPLIVD 6142 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+ G+L SNHD +C VH AHVAS DAIMTRCLAV++CF ++W+VEYPII +EL Sbjct 6143 IQQWGYIGSLSSNHDLYCSVHKGAHVASSDAIMTRCLAVYDCFCNNINWNVEYPIISNEL 6202 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 +N++CR +Q +++K+A+L +++ + +DIGNPKAI CV + ++KFYDAQP + Sbjct 6203 SINTSCRVLQRVMLKAAMLCNRYTLCYDIGNPKAIACVK--DFDFKFYDAQPI---VKSV 6257 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 + L Y + H D F DG+C+FWNCNVD+YP NA+VCRFDTRVL+NLNLPGC+GGSLYVNK Sbjct 6258 KTLLYFFEAHKDSFKDGLCMFWNCNVDKYPPNAVVCRFDTRVLNNLNLPGCNGGSLYVNK 6317 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++AF +LK +PFFYYSD+PC +DYVPLKSATCITRCNLGGAV Sbjct 6318 HAFHTKPFSRAAFEHLKPMPFFYYSDTPCVYMDGMDAKQVDYVPLKSATCITRCNLGGAV 6377 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EYR+YL++YN +AGF+ W+YK FD YNLWNTFT+LQ Sbjct 6378 CLKHAEEYREYLESYNTATTAGFTFWVYKTFDFYNLWNTFTKLQ 6421 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyl transferase; AltName: Full=nsp16 [Murine hepatitis virus strain JHM] Sequence ID: P0C6Y0.1 Length: 7180 Range 1: 5991 to 6507 Score:658 bits(1698), Expect:0.0, Method:Compositional matrix adjust., Identities:303/524(58%), Positives:386/524(73%), Gaps:8/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEG-LCVDIPGIPKDMTYRRLISMMGFKMN 63 T LFKDCSK G+ P L+VD K+K G L V + +TY RLIS+MGFK++ Sbjct 5991 TNLFKDCSKSYVGIPP--CAFLLAVDDKYKVSGNLAVCLNVADSAVTYSRLISLMGFKLD 6048 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FITR+EAI+ VRAW+GFD EG HATRD++GTN PLQLGFSTG++ V TG Sbjct 6049 LTLDGYCKLFITRDEAIKRVRAWVGFDAEGAHATRDSIGTNFPLQLGFSTGIDFVVEATG 6108 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + A+ PPG+QFKHL+PLM +G W+VVRI+IVQMLSD L L+D VV Sbjct 6109 MFAERDGYVFKKAAARAPPGEQFKHLVPLMSRGQKWDVVRIRIVQMLSDHLVDLADSVVL 6168 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 V WA FELT ++YF K+G E C +C+KRATCF++ + Y CW HS DY+YNP ++D Sbjct 6169 VTWAASFELTCLRYFAKVGKEVVCSVCNKRATCFNSRTGYYGCWRHSYSCDYLYNPLIVD 6228 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+TG+L SNHD C VH AHVAS DAIMTRCLAVH+CF K V+W++EYPII +E+ Sbjct 6229 IQQWGYTGSLTSNHDPICSVHKGAHVASSDAIMTRCLAVHDCFCKSVNWNLEYPIISNEV 6288 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 VN++CR +Q ++ ++A+L +++ V +DIGNPK + CV ++KFYDA P + Sbjct 6289 SVNTSCRLLQRVMFRAAMLCNRYDVCYDIGNPKGLACVKG--YDFKFYDASPV---VKSV 6343 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 ++ Y Y H D+F DG+C+FWNCNVD+YPANA+VCRFDTRVLS LNLPGC+GGSLYVNK Sbjct 6344 KQFVYKYEAHKDQFLDGLCMFWNCNVDKYPANAVVCRFDTRVLSKLNLPGCNGGSLYVNK 6403 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++AF NLK +PFFYYSD+PC +DYVPL+SATCITRCNLGGAV Sbjct 6404 HAFHTNPFTRAAFENLKPMPFFYYSDTPCVYMEGMESKQVDYVPLRSATCITRCNLGGAV 6463 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EYR+YL++YN +AGF+ W+YK FD YNLWNTFTRLQ Sbjct 6464 CLKHAEEYREYLESYNTATTAGFTFWVYKTFDFYNLWNTFTRLQ 6507 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Human coronavirus HKU1 (isolate N1)] Sequence ID: P0C6X2.1 Length: 7182 Range 1: 5991 to 6509 Score:658 bits(1698), Expect:0.0, Method:Compositional matrix adjust., Identities:300/524(57%), Positives:390/524(74%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMGFKMN 63 T LFKDCSK G HP AP+ L+VD K+K E L V++ +TY RLIS+MGFK++ Sbjct 5991 TNLFKDCSKSCLGYHPAHAPSFLAVDDKYKVNENLAVNLNICEPVLTYSRLISLMGFKLD 6050 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FIT++EAI+ VR W+GFDVEG HATR+ +GTN PLQ+GFSTGV+ V TG Sbjct 6051 LTLDGYSKLFITKDEAIKRVRGWVGFDVEGAHATRENIGTNFPLQIGFSTGVDFVVEATG 6110 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + AK PPG++FKHLIPLM KG W++VRI+IVQMLSD L LSD VVF Sbjct 6111 LFAERDCYTFKKTVAKAPPGEKFKHLIPLMSKGQKWDIVRIRIVQMLSDYLLDLSDSVVF 6170 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 + W+ FELT ++YF K+G E C +C RATC+++ + Y CW HS DYVYNP ++D Sbjct 6171 ITWSASFELTCLRYFAKLGRELNCNVCSNRATCYNSRTGYYGCWRHSYTCDYVYNPLIVD 6230 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+TG+L SNHD C VH AHVAS DAIMTRCLA+++CF K V+W++EYPII +E+ Sbjct 6231 IQQWGYTGSLTSNHDIICNVHKGAHVASADAIMTRCLAIYDCFCKSVNWNLEYPIISNEV 6290 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 +N++CR +Q +++K+A+L +++ + +DIGNPK + CV + E+KFYDA P A + Sbjct 6291 SINTSCRLLQRVMLKAAMLCNRYNLCYDIGNPKGLACVK--DYEFKFYDAFPV---AKSV 6345 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 ++LFY Y H D F DG+C+FWNCNVD+YP+N+IVCRFDTRVL+ LNLPGC+GGSLYVNK Sbjct 6346 KQLFYVYDVHKDNFKDGLCMFWNCNVDKYPSNSIVCRFDTRVLNKLNLPGCNGGSLYVNK 6405 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++ F NLK +PFFYYSD+PC +DYVPL+SATCITRCNLGGAV Sbjct 6406 HAFHTNPFTRTVFENLKPMPFFYYSDTPCVYVDGLESKQVDYVPLRSATCITRCNLGGAV 6465 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EY YL++YN++ +AGF+ W+YK FD YNLWNTFT LQ Sbjct 6466 CSKHAEEYCNYLESYNIVTTAGFTFWVYKNFDFYNLWNTFTTLQ 6509 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Human coronavirus HKU1 (isolate N5)] Sequence ID: P0C6X4.1 Length: 7132 Range 1: 5941 to 6459 Score:658 bits(1698), Expect:0.0, Method:Compositional matrix adjust., Identities:300/524(57%), Positives:390/524(74%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMGFKMN 63 T LFKDCSK G HP AP+ L+VD K+K E L V++ +TY RLIS+MGFK++ Sbjct 5941 TNLFKDCSKSCLGYHPAHAPSFLAVDDKYKVNENLAVNLNICEPVLTYSRLISLMGFKLD 6000 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FIT++EAI+ VR W+GFDVEG HATR+ +GTN PLQ+GFSTGV+ V TG Sbjct 6001 LTLDGYSKLFITKDEAIKRVRGWVGFDVEGAHATRENIGTNFPLQIGFSTGVDFVVEATG 6060 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + AK PPG++FKHLIPLM KG W++VRI+IVQMLSD L LSD VVF Sbjct 6061 LFAERDCYTFKKTVAKAPPGEKFKHLIPLMSKGQKWDIVRIRIVQMLSDYLLDLSDSVVF 6120 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 + W+ FELT ++YF K+G E C +C RATC+++ + Y CW HS DYVYNP ++D Sbjct 6121 ITWSASFELTCLRYFAKLGRELNCNVCSNRATCYNSRTGYYGCWRHSYTCDYVYNPLIVD 6180 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+TG+L SNHD C VH AHVAS DAIMTRCLA+++CF K V+W++EYPII +E+ Sbjct 6181 IQQWGYTGSLTSNHDIICNVHKGAHVASADAIMTRCLAIYDCFCKSVNWNLEYPIISNEV 6240 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 +N++CR +Q +++K+A+L +++ + +DIGNPK + CV + E+KFYDA P A + Sbjct 6241 SINTSCRLLQRVMLKAAMLCNRYNLCYDIGNPKGLACVK--DYEFKFYDAFPV---AKSV 6295 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 ++LFY Y H D F DG+C+FWNCNVD+YP+N+IVCRFDTRVL+ LNLPGC+GGSLYVNK Sbjct 6296 KQLFYVYDVHKDNFKDGLCMFWNCNVDKYPSNSIVCRFDTRVLNKLNLPGCNGGSLYVNK 6355 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++ F NLK +PFFYYSD+PC +DYVPL+SATCITRCNLGGAV Sbjct 6356 HAFHTNPFTRTVFENLKPMPFFYYSDTPCVYVDGLESKQVDYVPLRSATCITRCNLGGAV 6415 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EY YL++YN++ +AGF+ W+YK FD YNLWNTFT LQ Sbjct 6416 CSKHAEEYCNYLESYNIVTTAGFTFWVYKTFDFYNLWNTFTTLQ 6459 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Bovine coronavirus Mebus] Sequence ID: P0C6W9.1 Length: 7094 Range 1: 5903 to 6421 Score:658 bits(1697), Expect:0.0, Method:Compositional matrix adjust., Identities:300/524(57%), Positives:387/524(73%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKD-MTYRRLISMMGFKMN 63 T LFKDCSK +G HP AP+ L+VD K+K G GI +TY RL S+MGFK++ Sbjct 5903 TNLFKDCSKSYSGYHPAHAPSFLAVDDKYKATGDLAVCLGIGDSAVTYSRLTSLMGFKLD 5962 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY +FIT+EEA++ VRAW+GFD EG HATRD++GTN PLQLGFSTG++ V TG Sbjct 5963 VTLDGYCKLFITKEEAVKRVRAWVGFDAEGAHATRDSIGTNFPLQLGFSTGIDFVVEATG 6022 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F + AK PPG+QFKHLIPLM +G W+VVR +IVQM +D L LSD VV Sbjct 6023 LFADRDGYSFKKAVAKAPPGEQFKHLIPLMTRGQRWDVVRPRIVQMFADHLIDLSDCVVL 6082 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 V WA FELT ++YF K+G E +C +C KRAT +++ + Y CW HSV DY+YNP ++D Sbjct 6083 VTWAANFELTCLRYFAKVGREISCNVCTKRATAYNSRTGYYGCWRHSVTCDYLYNPLIVD 6142 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+ G+L SNHD +C VH AHVAS DAIMTRCLAV++CF ++W+VEYPII +EL Sbjct 6143 IQQWGYIGSLSSNHDLYCSVHKGAHVASSDAIMTRCLAVYDCFCNNINWNVEYPIISNEL 6202 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 +N++CR +Q +++K+A+L +++ + +DIGNPKAI CV + ++KFYDAQP + Sbjct 6203 SINTSCRVLQRVMLKAAMLCNRYTLCYDIGNPKAIACVK--DFDFKFYDAQPI---VKSV 6257 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 + L Y + H D F DG+C+FWNCNVD+YP NA+VCRFDTRVL+NLNLPGC+GGSLYVNK Sbjct 6258 KTLLYFFEAHKDSFKDGLCMFWNCNVDKYPPNAVVCRFDTRVLNNLNLPGCNGGSLYVNK 6317 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++AF +LK +PFFYYSD+PC +DYVPLKSATCITRCNL GAV Sbjct 6318 HAFHTKPFSRAAFEHLKPMPFFYYSDTPCVYMDGMDAKQVDYVPLKSATCITRCNLVGAV 6377 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA EYR+YL++YN +AGF+ W+YK FD YNLWNTFT+LQ Sbjct 6378 CLKHAEEYREYLNSYNTATTAGFTFWVYKTFDFYNLWNTFTKLQ 6421 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=p28; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65; Contains: RecName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=p210; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p44; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p22; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p15; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p67; Contains: RecName: Full=Guanine-N7 methyltransferase; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p35; Contains: RecName: Full=2'-O-methyltransferase; AltName: Full=nsp16 [Human coronavirus HKU1 (isolate N2)] Sequence ID: P0C6X3.1 Length: 7152 Range 1: 5961 to 6479 Score:657 bits(1695), Expect:0.0, Method:Compositional matrix adjust., Identities:304/524(58%), Positives:386/524(73%), Gaps:6/524(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMGFKMN 63 T LFKDCSK G HP AP+ LSVD K+K E L V + +TY RLIS+MGFK++ Sbjct 5961 TNLFKDCSKNFLGYHPAHAPSFLSVDDKYKVNEDLAVCLNICEPVLTYSRLISLMGFKLD 6020 Query 64 YQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTG 123 ++GY FIT++EAI+ VR W+GFDVEG HATRD +GTN PLQ+GFSTGV+ V TG Sbjct 6021 LTLDGYSKFFITKDEAIKRVRGWVGFDVEGAHATRDNIGTNFPLQIGFSTGVDFVVEATG 6080 Query 124 YVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVF 183 + F R AK PPGD FKHLIPLM KG W+VVRI+IVQMLSD L LSD VVF Sbjct 6081 LFAERDCYIFKRTVAKAPPGDNFKHLIPLMSKGQKWDVVRIRIVQMLSDYLLDLSDSVVF 6140 Query 184 VLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 + W+ FELT ++YF K+G E C +C RATC+++ + Y CW HS DYVYNP ++D Sbjct 6141 ITWSASFELTCLRYFAKLGRELNCDVCPNRATCYNSRTGYYGCWRHSYTCDYVYNPLIVD 6200 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+TG+L SNHD C VH AHVAS DAIMTRCLA+++CF K V+W++EYPII +E+ Sbjct 6201 IQQWGYTGSLTSNHDIICNVHKGAHVASSDAIMTRCLAIYDCFCKSVNWNLEYPIISNEV 6260 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 +N++CR +Q +++K+A+L +++ + +DIGNPK I CV + E+KFYDA P + Sbjct 6261 SINTSCRLLQRVMLKAAMLCNRYNLCYDIGNPKGIACVK--DYEFKFYDASPV---VKSV 6315 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 ++LFY Y H D F DG+C+FWNCNVD+YP+N+IVCRFDTRVL+ LNLPGC+GGSLYVNK Sbjct 6316 KQLFYVYDVHKDNFKDGLCMFWNCNVDKYPSNSIVCRFDTRVLNKLNLPGCNGGSLYVNK 6375 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHT F ++ F NLK +PFFYYSD+PC +DYVPL+SATCITRCNLGGAV Sbjct 6376 HAFHTNPFTRTVFENLKPMPFFYYSDTPCVYVDGLESKQVDYVPLRSATCITRCNLGGAV 6435 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 C HA +Y +YL++YN+ +AGF+ W+YK FD YNLWNTFT LQ Sbjct 6436 CSKHAEDYCKYLESYNVATTAGFTFWVYKTFDFYNLWNTFTMLQ 6479 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p87; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p41; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p33; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; AltName: Full=p34; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p9; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p24; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p16; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p68; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; AltName: Full=p58; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p39; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16; AltName: Full=p35 [Avian infectious bronchitis virus (strain M41)] Sequence ID: P0C6Y3.1 Length: 6631 Range 1: 5472 to 5991 Score:592 bits(1527), Expect:0.0, Method:Compositional matrix adjust., Identities:275/525(52%), Positives:363/525(69%), Gaps:7/525(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIP--KDMTYRRLISMMGFKM 62 TGLFK C+K +G+HP A T ++ +K + + ++TY+ LIS++GFKM Sbjct 5472 TGLFKICNKEFSGVHPAYAVTTKALAATYKVNDELAALVNVEAGSEITYKHLISLLGFKM 5531 Query 63 NYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPT 122 + V G NMFITR+EAIR+VR W+GFDVE HA +GTNLP Q+GFSTG + V P Sbjct 5532 SVNVEGCHNMFITRDEAIRNVRGWVGFDVEATHACGTNIGTNLPFQVGFSTGADFVVTPE 5591 Query 123 GYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVV 182 G VDT F VN+K PPG+QF HL L PW+VVR +IVQML+D L +SD VV Sbjct 5592 GLVDTSIGNNFEPVNSKAPPGEQFNHLRALFKSAKPWHVVRPRIVQMLADNLCNVSDCVV 5651 Query 183 FVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMI 242 FV W HG ELT+++YFVKIG ++ C C RAT F++ + YACW H +GFD+VYNP ++ Sbjct 5652 FVTWCHGLELTTLRYFVKIGKDQVCS-CGSRATTFNSHTQAYACWKHCLGFDFVYNPLLV 5710 Query 243 DVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDE 302 D+QQWG++GNLQ NHD HC VHG+AHVAS DAIMTRCLA++ F + V+W + YP I +E Sbjct 5711 DIQQWGYSGNLQFNHDLHCNVHGHAHVASADAIMTRCLAINNAFCQDVNWDLTYPHIANE 5770 Query 303 LRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYK 362 VNS+CR +Q M + + + A K V++DIGNPK IKCV + ++ ++FYD P + Sbjct 5771 DEVNSSCRYLQRMYLNACVDALKVNVVYDIGNPKGIKCVRRGDLNFRFYDKNPIVPNVKQ 5830 Query 363 IEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVN 422 E Y Y H DKF DG+C+FWNCNVD YP N++VCR+DTR LS NLPGC+GGSLYVN Sbjct 5831 FE---YDYNQHKDKFADGLCMFWNCNVDCYPDNSLVCRYDTRNLSVFNLPGCNGGSLYVN 5887 Query 423 KHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGA 482 KHAFHTP FD+++F NLK +PFF+Y SPCE+ V+ D V L + CIT+CN+GGA Sbjct 5888 KHAFHTPKFDRTSFRNLKAMPFFFYDSSPCETIQLDGVAQ-DLVSLATKDCITKCNIGGA 5946 Query 483 VCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 VC+ HA Y ++ +YN ++AGF+ W+ F+ YNLW +F+ LQ Sbjct 5947 VCKKHAQMYADFVTSYNAAVTAGFTFWVTNNFNPYNLWKSFSALQ 5991 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p87; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p41; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p33; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; AltName: Full=p34; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p9; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p24; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p16; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p68; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; AltName: Full=p58; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p39; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16; AltName: Full=p35 [Avian infectious bronchitis virus (strain Beaudette)] Sequence ID: P0C6Y1.1 Length: 6629 Range 1: 5470 to 5989 Score:590 bits(1520), Expect:0.0, Method:Compositional matrix adjust., Identities:274/525(52%), Positives:363/525(69%), Gaps:7/525(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIP--KDMTYRRLISMMGFKM 62 TGLFK C+K +G+HP A T ++ +K + + ++TY+ LIS++GFKM Sbjct 5470 TGLFKICNKEFSGVHPAYAVTTKALAATYKVNDELAALVNVEAGSEITYKHLISLLGFKM 5529 Query 63 NYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPT 122 + V G NMFITR+EAIR+VR W+GFDVE HA +GTNLP Q+GFSTG + V P Sbjct 5530 SVNVEGCHNMFITRDEAIRNVRGWVGFDVEATHACGTNIGTNLPFQVGFSTGADFVVTPE 5589 Query 123 GYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVV 182 G VDT F VN+K PPG+QF HL L PW+V+R +IVQML+D L +SD VV Sbjct 5590 GLVDTSIGNNFEPVNSKAPPGEQFNHLRVLFKSAKPWHVIRPRIVQMLADNLCNVSDCVV 5649 Query 183 FVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMI 242 FV W HG ELT+++YFVKIG E+ C C RAT F++ + YACW H +GFD+VYNP ++ Sbjct 5650 FVTWCHGLELTTLRYFVKIGKEQVCS-CGSRATTFNSHTQAYACWKHCLGFDFVYNPLLV 5708 Query 243 DVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDE 302 D+QQWG++GNLQ NHD HC VHG+AHVAS DAIMTRCLA++ F + V+W + YP I +E Sbjct 5709 DIQQWGYSGNLQFNHDLHCNVHGHAHVASVDAIMTRCLAINNAFCQDVNWDLTYPHIANE 5768 Query 303 LRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYK 362 VNS+CR +Q M + + + A K V++DIGNPK IKCV + +V ++FYD P + Sbjct 5769 DEVNSSCRYLQRMYLNACVDALKVNVVYDIGNPKGIKCVRRGDVNFRFYDKNPIVRNVKQ 5828 Query 363 IEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVN 422 E Y Y H DKF DG+C+FWNCNVD YP N++VCR+DTR LS NLPGC+GGSLYVN Sbjct 5829 FE---YDYNQHKDKFADGLCMFWNCNVDCYPDNSLVCRYDTRNLSVFNLPGCNGGSLYVN 5885 Query 423 KHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGA 482 KHAF+TP FD+ +F NLK +PFF+Y SPCE+ V+ D V L + CIT+CN+GGA Sbjct 5886 KHAFYTPKFDRISFRNLKAMPFFFYDSSPCETIQVDGVAQ-DLVSLATKDCITKCNIGGA 5944 Query 483 VCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 VC+ HA Y +++ +YN ++AGF+ W+ + + YNLW +F+ LQ Sbjct 5945 VCKKHAQMYAEFVTSYNAAVTAGFTFWVTNKLNPYNLWKSFSALQ 5989 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p87; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=Papain-like proteinase; Short=PL-PRO; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; AltName: Full=p41; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p33; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; AltName: Full=p34; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p9; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p24; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p10; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p16; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p68; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; AltName: Full=p58; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p39; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16; AltName: Full=p35 [Avian infectious bronchitis virus (strain Beaudette CK)] Sequence ID: P0C6Y2.1 Length: 6629 Range 1: 5470 to 5989 Score:590 bits(1520), Expect:0.0, Method:Compositional matrix adjust., Identities:274/525(52%), Positives:363/525(69%), Gaps:7/525(1%) Query 5 TGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIP--KDMTYRRLISMMGFKM 62 TGLFK C+K +G+HP A T ++ +K + + ++TY+ LIS++GFKM Sbjct 5470 TGLFKICNKEFSGVHPAYAVTTKALAATYKVNDELAALVNVEAGSEITYKHLISLLGFKM 5529 Query 63 NYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPT 122 + V G NMFITR+EAIR+VR W+GFDVE HA +GTNLP Q+GFSTG + V P Sbjct 5530 SVNVEGCHNMFITRDEAIRNVRGWVGFDVEATHACGTNIGTNLPFQVGFSTGADFVVTPE 5589 Query 123 GYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVV 182 G VDT F VN+K PPG+QF HL L PW+V+R +IVQML+D L +SD VV Sbjct 5590 GLVDTSIGNNFEPVNSKAPPGEQFNHLRVLFKSAKPWHVIRPRIVQMLADNLCNVSDCVV 5649 Query 183 FVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMI 242 FV W HG ELT+++YFVKIG E+ C C RAT F++ + YACW H +GFD+VYNP ++ Sbjct 5650 FVTWCHGLELTTLRYFVKIGKEQVCS-CGSRATTFNSHTQAYACWKHCLGFDFVYNPLLV 5708 Query 243 DVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDE 302 D+QQWG++GNLQ NHD HC VHG+AHVAS DAIMTRCLA++ F + V+W + YP I +E Sbjct 5709 DIQQWGYSGNLQFNHDLHCNVHGHAHVASVDAIMTRCLAINNAFCQDVNWDLTYPHIANE 5768 Query 303 LRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYK 362 VNS+CR +Q M + + + A K V++DIGNPK IKCV + +V ++FYD P + Sbjct 5769 DEVNSSCRYLQRMYLNACVDALKVNVVYDIGNPKGIKCVRRGDVNFRFYDKNPIVRNVKQ 5828 Query 363 IEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVN 422 E Y Y H DKF DG+C+FWNCNVD YP N++VCR+DTR LS NLPGC+GGSLYVN Sbjct 5829 FE---YDYNQHKDKFADGLCMFWNCNVDCYPDNSLVCRYDTRNLSVFNLPGCNGGSLYVN 5885 Query 423 KHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGA 482 KHAF+TP FD+ +F NLK +PFF+Y SPCE+ V+ D V L + CIT+CN+GGA Sbjct 5886 KHAFYTPKFDRISFRNLKAMPFFFYDSSPCETIQVDGVAQ-DLVSLATKDCITKCNIGGA 5944 Query 483 VCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 VC+ HA Y +++ +YN ++AGF+ W+ + + YNLW +F+ LQ Sbjct 5945 VCKKHAQMYAEFVTSYNAAVTAGFTFWVTNKLNPYNLWKSFSALQ 5989 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL1-PRO/PL2-PRO; AltName: Full=PLP1/PLP2; AltName: Full=Papain-like proteinases 1/2; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; Contains: RecName: Full=Non-structural protein 11; Short=nsp11; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16 [Feline infectious peritonitis virus (strain 79-1146)] Sequence ID: Q98VG9.2 Length: 6709 Range 1: 5558 to 6063 Score:566 bits(1459), Expect:2e-180, Method:Compositional matrix adjust., Identities:280/520(54%), Positives:356/520(68%), Gaps:16/520(3%) Query 6 GLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMGFKMNY 64 GLFKDCSK + P A T++S+ FKT +GL V+I KD+ Y +IS MGF+ Sbjct 5558 GLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIG--TKDVKYANVISYMGFRFEA 5615 Query 65 QVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTGY 124 + GY +F TR+ A+R+VRAW+GFDVEG H D VGTN+PLQLGFS GV+ V G Sbjct 5616 NIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGC 5675 Query 125 VDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFV 184 V TE V A+ PPG+QF HLIPLM KG PW++VR +IVQM+ D GLSD ++FV Sbjct 5676 VVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFV 5735 Query 185 LWAHGFELTSMKYFVKIG-PERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 LWA G ELT+M+YFVKIG P++ C C K ATC+S+S YAC+ H++G DY+YNP+ ID Sbjct 5736 LWAGGLELTTMRYFVKIGRPQK--CECGKSATCYSSSQCVYACFKHALGCDYLYNPYCID 5793 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+TG+L NH + C +H N HVAS DAIMTRCLA+H+CFVKRVDWS+ YP I +E Sbjct 5794 IQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEE 5853 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 ++N A R VQ V+K+AL +HD+GNPK I+C + W YD P ++ + Sbjct 5854 KINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA-TTPIPWFCYDRDPINNNVRCL 5912 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 E Y Y H +G+ LFWNCNVD YP +IVCRFDTR S L+L GC+GG+LYVN Sbjct 5913 E---YDYMVHGQ--MNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNN 5967 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHTPA+D+ AF LK +PFFYY DS CE Q +YVPLKS CIT+CN+GGAV Sbjct 5968 HAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQP----NYVPLKSNVCITKCNIGGAV 6023 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTF 523 C+ HA YR Y++ YNM + AGF++W + FDTY LW+ F Sbjct 6024 CKKHAALYRAYVEDYNMFMQAGFTIWCPQNFDTYMLWHGF 6063 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; AltName: Full=p9; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p87; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL1-PRO/PL2-PRO; AltName: Full=PLP1/PLP2; AltName: Full=Papain-like proteinases 1/2; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p34; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p5; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p23; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p14; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p66; AltName: Full=p66-HEL; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p41; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16 [Porcine transmissible gastroenteritis coronavirus strain Purdue] Sequence ID: P0C6Y5.1 Length: 6684 Range 1: 5533 to 6038 Score:566 bits(1458), Expect:3e-180, Method:Compositional matrix adjust., Identities:279/520(54%), Positives:356/520(68%), Gaps:16/520(3%) Query 6 GLFKDCSKIITGLHPTQAPTHLSVDIKFKT-EGLCVDIPGIPKDMTYRRLISMMGFKMNY 64 GLFKDCSK + P A T++S+ FKT +GL V+I KD+ Y +IS MGF+ Sbjct 5533 GLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIG--TKDVKYANVISYMGFRFEA 5590 Query 65 QVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTGY 124 + GY +F TR+ A+R+VRAW+GFDVEG H D VGTN+PLQLGFS GV+ V G Sbjct 5591 NIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGC 5650 Query 125 VDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFV 184 V TE V A+ PPG+QF HLIPLM KG PW++VR +IVQM+ D GLSD ++FV Sbjct 5651 VITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFV 5710 Query 185 LWAHGFELTSMKYFVKIG-PERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMID 243 LWA G ELT+M+YFVKIG P++ C C K ATC+S+S YAC+ H++G DY+YNP+ ID Sbjct 5711 LWAGGLELTTMRYFVKIGRPQK--CECGKSATCYSSSQSVYACFKHALGCDYLYNPYCID 5768 Query 244 VQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDEL 303 +QQWG+TG+L NH + C +H N HVAS DAIMTRCLA+H+CFVKRVDWS+ YP I +E Sbjct 5769 IQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEE 5828 Query 304 RVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKI 363 ++N A R VQ V+K+AL +HD+GNPK I+C + W YD P ++ + Sbjct 5829 KINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA-TTPIPWFCYDRDPINN---NV 5884 Query 364 EELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNK 423 L Y Y H +G+ LFWNCNVD YP +IVCRFDTR S L+L GC+GG+LYVN Sbjct 5885 RCLDYDYMVHGQ--MNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNN 5942 Query 424 HAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAV 483 HAFHTPA+D+ AF LK +PFFYY DS CE Q +YVPLKS CIT+CN+GGAV Sbjct 5943 HAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQP----NYVPLKSNVCITKCNIGGAV 5998 Query 484 CRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTF 523 C+ HA YR Y++ YN+ + AGF++W + FDTY LW+ F Sbjct 5999 CKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGF 6038 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; AltName: Full=p9; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p87; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL1-PRO/PL2-PRO; AltName: Full=PLP1/PLP2; AltName: Full=Papain-like proteinases 1/2; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p34; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p5; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p23; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p16; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p66; AltName: Full=p66-HEL; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p41; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16 [Human coronavirus 229E] Sequence ID: P0C6X1.1 Length: 6758 Range 1: 5593 to 6108 Score:563 bits(1451), Expect:3e-179, Method:Compositional matrix adjust., Identities:275/528(52%), Positives:357/528(67%), Gaps:13/528(2%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEG-LCVDIPGIPKDMTYRRLISMMG 59 +E+ GLFKDC++ L P+ A T+LS+ +FKT G L V I G TY +IS MG Sbjct 5593 SESSCGLFKDCARNPIDLPPSHATTYLSLSDRFKTSGDLAVQI-GNNNVCTYEHVISYMG 5651 Query 60 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA 119 F+ + + G ++F TR+ A+RHVR W+G DVEG H T D VGTN+PLQ+GFS GV+ VA Sbjct 5652 FRFDVSMPGSHSLFCTRDFAMRHVRGWLGMDVEGAHVTGDNVGTNVPLQVGFSNGVDFVA 5711 Query 120 VPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSD 179 P G V T + V A+ PPG+QF H++PL+ KG PW+V+R +IVQM++D L G SD Sbjct 5712 QPEGCVLTNTGSVVKPVRARAPPGEQFTHIVPLLRKGQPWSVLRKRIVQMIADFLAGSSD 5771 Query 180 RVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNP 239 +VFVLWA G ELT+M+YFVKIG + C C ATC+++ S+ Y C+ H++G DYVYNP Sbjct 5772 VLVFVLWAGGLELTTMRYFVKIGAVKH-CQCGTVATCYNSVSNDYCCFKHALGCDYVYNP 5830 Query 240 FMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPII 299 ++ID+QQWG+ G+L +NH C VH N HVAS DAIMTRCLAV++CFVK VDWS+ YP+I Sbjct 5831 YVIDIQQWGYVGSLSTNHHAICNVHRNEHVASGDAIMTRCLAVYDCFVKNVDWSITYPMI 5890 Query 300 GDELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDK 359 +E +N R VQ ++++A+ +HDIGNPK I+C + +W YD P + Sbjct 5891 ANENAINKGGRTVQSHIMRAAIKLYNPKAIHDIGNPKGIRCAV-TDAKWYCYDKNPINSN 5949 Query 360 AYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSL 419 +E Y Y TH DG+CLFWNCNVD YP +IVCRFDTR S LNL G +GGSL Sbjct 5950 VKTLE---YDYMTHGQ--MDGLCLFWNCNVDMYPEFSIVCRFDTRTRSTLNLEGVNGGSL 6004 Query 420 YVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNL 479 YVN HAFHTPA+DK A LK PFFYY D CE QV +YVPL++ CIT+CN+ Sbjct 6005 YVNNHAFHTPAYDKRAMAKLKPAPFFYYDDGSCEVVHDQV----NYVPLRATNCITKCNI 6060 Query 480 GGAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTRLQ 527 GGAVC HAN YR Y+++YN+ AGF++W+ FD YNLW TFT + Sbjct 6061 GGAVCSKHANLYRAYVESYNIFTQAGFNIWVPTTFDCYNLWQTFTEVN 6108 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; AltName: Full=p9; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p87; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL1-PRO/PL2-PRO; AltName: Full=PLP1/PLP2; AltName: Full=Papain-like proteinases 1/2; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p34; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p5; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p23; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p14; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p66; AltName: Full=p66-HEL; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16 [Porcine epidemic diarrhea virus CV777] Sequence ID: P0C6Y4.1 Length: 6781 Range 1: 5630 to 6137 Score:561 bits(1445), Expect:1e-178, Method:Compositional matrix adjust., Identities:268/519(52%), Positives:352/519(67%), Gaps:11/519(2%) Query 6 GLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQ 65 GLFKDCS+ L P+ A T +S+ FKT+ G+ + Y +IS MGF+ + Sbjct 5630 GLFKDCSRGDDLLPPSHANTFMSLADNFKTDQYLAVQIGVNGPIKYEHVISFMGFRFDIN 5689 Query 66 VNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTGYV 125 + + +F TR+ A+R+VR W+GFDVEG H VGTN+PLQLGFS GV+ V P G V Sbjct 5690 IPNHHTLFCTRDFAMRNVRGWLGFDVEGAHVVGSNVGTNVPLQLGFSNGVDFVVRPEGCV 5749 Query 126 DTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFVL 185 TE+ V A+ PPG+QF HL+PL+ +G PW+VVR +IVQM SD L LSD ++FVL Sbjct 5750 VTESGDYIKPVRARAPPGEQFAHLLPLLKRGQPWDVVRKRIVQMCSDYLANLSDILIFVL 5809 Query 186 WAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQ 245 WA G ELT+M+YFVKIGP ++ C C K ATC++++ TY C+ H++G DY+YNP+ ID+Q Sbjct 5810 WAGGLELTTMRYFVKIGPSKS-CDCGKVATCYNSALHTYCCFKHALGCDYLYNPYCIDIQ 5868 Query 246 QWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDELRV 305 QWG+ G+L NH +HC VH N HVAS DAIMTRCLA+H+CFVK VDWS+ YP IG+E + Sbjct 5869 QWGYKGSLSLNHHEHCNVHRNEHVASGDAIMTRCLAIHDCFVKNVDWSITYPFIGNEAVI 5928 Query 306 NSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIEE 365 N + R VQ ++S L ++DIGNPK I+C + +W +D P + +E Sbjct 5929 NKSGRIVQSHTMRSVLKLYNPKAIYDIGNPKGIRCA-VTDAKWFCFDKNPTNSNVKTLE- 5986 Query 366 LFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNKHA 425 Y Y TH DG+CLFWNCNVD YP ++VCRFDTR S LNL GC+GGSLYVN HA Sbjct 5987 --YDYITHGQ--FDGLCLFWNCNVDMYPEFSVVCRFDTRCRSPLNLEGCNGGSLYVNNHA 6042 Query 426 FHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCR 485 FHTPAFDK AF LK +PFF+Y D+ C+ ++ I+YVPL+++ CIT+CN+GGAVC Sbjct 6043 FHTPAFDKRAFAKLKPMPFFFYDDTECD----KLQDSINYVPLRASNCITKCNVGGAVCS 6098 Query 486 HHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFT 524 H Y Y++AYN SAGF++W+ FDTYNLW TF+ Sbjct 6099 KHCAMYHSYVNAYNTFTSAGFTIWVPTSFDTYNLWQTFS 6137 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; AltName: Full=p9; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p87; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL1-PRO/PL2-PRO; AltName: Full=PLP1/PLP2; AltName: Full=Papain-like proteinases 1/2; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p34; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p5; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p23; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p14; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p66; AltName: Full=p66-HEL; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; AltName: Full=p41; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16 [Human coronavirus NL63] Sequence ID: P0C6X5.1 Length: 6729 Range 1: 5568 to 6085 Score:559 bits(1441), Expect:5e-178, Method:Compositional matrix adjust., Identities:279/530(53%), Positives:356/530(67%), Gaps:15/530(2%) Query 1 AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEG-LCVDIPGIPKDMTYRRLISMMG 59 + V GLFK+C++ L PT A T LS+ +FKT G L V I G TY +IS MG Sbjct 5568 SSQVCGLFKNCTRTPLNLPPTHAHTFLSLSDQFKTTGDLAVQI-GSNNVCTYEHVISFMG 5626 Query 60 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA 119 F+ + + G ++F TR+ AIR+VR W+G DVE H D +GTN+PLQ+GFS GVN V Sbjct 5627 FRFDISIPGSHSLFCTRDFAIRNVRGWLGMDVESAHVCGDNIGTNVPLQVGFSNGVNFVV 5686 Query 120 VPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSD 179 G V T V AK PPG+QF+HLIPL+ KG PW +VR +IVQM+SD L LSD Sbjct 5687 QTEGCVSTNFGDVIKPVCAKSPPGEQFRHLIPLLRKGQPWLIVRRRIVQMISDYLSNLSD 5746 Query 180 RVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNP 239 +VFVLWA ELT+M+YFVKIGP + C C ATC+++ S+ Y C+ H++G DYVYNP Sbjct 5747 ILVFVLWAGSLELTTMRYFVKIGPIKY-CYCGNSATCYNSVSNEYCCFKHALGCDYVYNP 5805 Query 240 FMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPII 299 + D+QQWG+ G+L NH C +H N H AS DA+MTRCLAVH+CFVK VDW+V YP I Sbjct 5806 YAFDIQQWGYVGSLSQNHHTFCNIHRNEHDASGDAVMTRCLAVHDCFVKNVDWTVTYPFI 5865 Query 300 GDELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDK 359 +E +N R VQ VV++AL K V+HDIGNPK ++C + +W YD QP + Sbjct 5866 ANEKFINGCGRNVQGHVVRAALKLYKPSVIHDIGNPKGVRC-AVTDAKWYCYDKQPVNS- 5923 Query 360 AYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSL 419 ++ L Y YATH DG+CLFWNCNVD YP +IVCRFDTR S NL G +GGSL Sbjct 5924 --NVKLLDYDYATHGQ--LDGLCLFWNCNVDMYPEFSIVCRFDTRTRSVFNLEGVNGGSL 5979 Query 420 YVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNL 479 YVNKHAFHTPA+DK AF LK +PFFY+ DS C+ +QV +YVPL++++C+TRCN+ Sbjct 5980 YVNKHAFHTPAYDKRAFVKLKPMPFFYFDDSDCDVVQEQV----NYVPLRASSCVTRCNI 6035 Query 480 GGAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTF--TRLQ 527 GGAVC HAN Y++Y++AYN AGF++W+ FD YNLW F T LQ Sbjct 6036 GGAVCSKHANLYQKYVEAYNTFTQAGFNIWVPHSFDVYNLWQIFIETNLQ 6085 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; AltName: Full=p9; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p87; Contains: RecName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL1-PRO/PL2-PRO; AltName: Full=PLP1/PLP2; AltName: Full=Papain-like proteinases 1/2; AltName: Full=p195; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; AltName: Full=Peptide HD2; Contains: RecName: Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp; AltName: Full=M-PRO; AltName: Full=nsp5; AltName: Full=p34; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; AltName: Full=p5; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; AltName: Full=p23; Contains: RecName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; AltName: Full=p14; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp12; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13; AltName: Full=p66; AltName: Full=p66-HEL; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp16 [Scotophilus bat coronavirus 512] Sequence ID: P0C6W0.1 Length: 6793 Range 1: 5641 to 6147 Score:558 bits(1437), Expect:1e-177, Method:Compositional matrix adjust., Identities:268/519(52%), Positives:351/519(67%), Gaps:13/519(2%) Query 6 GLFKDCSKIITGLHPTQAPTHLSVDIKFKTE-GLCVDIPGIPKDMTYRRLISMMGFKMNY 64 GLFKDC K L P+ APT +S+ FKT+ L V I G+ + Y +IS MGF+ + Sbjct 5641 GLFKDCYKGEDNLPPSHAPTFMSLSDNFKTDKDLAVQI-GVNGPVKYEHVISFMGFRFDI 5699 Query 65 QVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTGY 124 V +F TR+ A+R+ R W+GFDVEG H VGTN+PLQLGFS GV+ V P G Sbjct 5700 NVPNQHTLFCTRDFAMRNARGWLGFDVEGAHVIGSNVGTNVPLQLGFSNGVDFVVRPEGC 5759 Query 125 VDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFV 184 V TE V A+ PPGDQF HL+PL+ KG PW+V+R +IVQM SD L LSD ++FV Sbjct 5760 VSTEVGDVIQPVRARAPPGDQFTHLLPLLRKGQPWSVIRRRIVQMCSDYLANLSDTLIFV 5819 Query 185 LWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDV 244 LW+ G ELT+M+YFVK+GP +T C C KRATC+++++ T++C+ H++G DY+YN + ID+ Sbjct 5820 LWSGGLELTTMRYFVKLGPVQT-CDCGKRATCYNSTNHTFSCFRHALGSDYIYNCYCIDI 5878 Query 245 QQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDELR 304 QQWG+TG+L NH + C +H N HVAS DA MTRCLA+H+CFVK VDWS+ YP I +E Sbjct 5879 QQWGYTGSLSMNHHEVCNIHRNEHVASGDAAMTRCLAIHDCFVKNVDWSITYPFIANEQA 5938 Query 305 VNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIE 364 +N + R VQ V+++ L +HD+GNPK I+CV + W YD P + +E Sbjct 5939 INKSGRLVQSHVMRAVLKLYNPKAIHDVGNPKGIRCVV-TDASWYCYDKNPTNTNVKMLE 5997 Query 365 ELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVNKH 424 Y Y TH DG+CLFWNCNVD YP ++VCRFDTR+ S LNL GC+GGSLYVN H Sbjct 5998 ---YDYITHGQ--LDGLCLFWNCNVDMYPEFSVVCRFDTRMRSTLNLEGCNGGSLYVNNH 6052 Query 425 AFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVC 484 AFHTPA+DK AF LK +PFF+Y DS CE ++ ++YVPL+++ CITRCN+GGAVC Sbjct 6053 AFHTPAYDKRAFAKLKAMPFFFYDDSECE----KLQDAVNYVPLRASNCITRCNVGGAVC 6108 Query 485 RHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTF 523 H Y Y+ AYN +AGF++W+ FD +NLW TF Sbjct 6109 SKHCALYHNYVMAYNTFTTAGFTIWVPNSFDMFNLWQTF 6147 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; AltName: Full=Papain-like proteinase; Short=PL-PRO; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; Contains: RecName: Full=3C-like serine proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName: Full=nsp3; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=Non-structural protein 5; Short=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp10; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp11; AltName: Full=p67; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp12; Contains: RecName: Full=Non-structural protein 13; Short=nsp13; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp14; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp15 [Breda virus serotype 1] Sequence ID: P0C6V8.1 Length: 6733 Range 1: 5953 to 6049 Score:52.4 bits(124), Expect:9e-06, Method:Compositional matrix adjust., Identities:35/101(35%), Positives:53/101(52%), Gaps:7/101(6%) Query 183 FVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWN--HSVGFDYVYNPF 240 F+L++ +L S+K++V+ G C C + A C Y C N ++ + N Sbjct 5953 FILYSCSNDLKSLKFYVEFGTNYFCS-CGELAICL-MRDGLYKCRNCYGNMSISKLVNCK 6010 Query 241 MIDVQQWGFTGNLQSNHDQHCQ-VHGNAHVASCDAIMTRCL 280 +DVQ+ LQ HD CQ HG++H A CDA+MT+CL Sbjct 6011 YLDVQKERI--KLQDAHDAICQQFHGDSHEALCDAVMTKCL 6049 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; Contains: RecName: Full=3C-like serine proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName: Full=nsp3; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=Non-structural protein 5; Short=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp9; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp10; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp11; Contains: RecName: Full=Non-structural protein 12; Short=nsp12; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp13; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp14 [White bream virus (strain DF24/00)] Sequence ID: Q008X6.1 Length: 6872 Range 1: 6074 to 6182 Score:52.0 bits(123), Expect:1e-05, Method:Compositional matrix adjust., Identities:38/112(34%), Positives:56/112(50%), Gaps:12/112(10%) Query 179 DRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACW-NHSVGFDY-- 235 +RVV+VL+ G +L ++ +G + TC C K AT ++ + + NH + Sbjct 6074 NRVVYVLYGAGNDLRALTNLNIVG-DYTCEKCTKEATFYTIHREIVHTFCNHHAPSQFPL 6132 Query 236 --VYNPFMIDVQQWGFTGNLQSNHDQHCQV----HGNAHVASCDAIMTRCLA 281 N ID+Q + N QS + H +V HG+AH AS D IMT CLA Sbjct 6133 MGTINAQAIDIQHA--SANKQSLTNTHAEVCNQQHGDAHTASADTIMTGCLA 6182 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; Contains: RecName: Full=3C-like serine proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName: Full=nsp3; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=Non-structural protein 5; Short=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=nsp10; AltName: Full=p100; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=nsp11; AltName: Full=p67; Contains: RecName: Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp12; Contains: RecName: Full=Non-structural protein 13; Short=nsp13; Contains: RecName: Full=Uridylate-specific endoribonuclease; AltName: Full=NendoU; AltName: Full=nsp14; Contains: RecName: Full=Putative 2'-O-methyl transferase; AltName: Full=nsp15 [Berne virus] Sequence ID: P0C6V7.1 Length: 6857 Range 1: 6077 to 6173 Score:50.1 bits(118), Expect:5e-05, Method:Compositional matrix adjust., Identities:37/103(36%), Positives:54/103(52%), Gaps:11/103(10%) Query 183 FVLWAHGFELTSMKYFVKIGPERTC--CLCDKRATCFSTSSDTYACWNHSVGF--DYVYN 238 F+L++ +L S+K++V+ TC C C + A C + Y C N G + N Sbjct 6077 FILYSCSNDLKSLKFYVEFD---TCYFCSCGEMAICLMRDGN-YKCRNCYGGMLISKLVN 6132 Query 239 PFMIDVQQWGFTGNLQSNHDQHCQ-VHGNAHVASCDAIMTRCL 280 +DVQ+ LQ HD CQ HG++H A CDA+MT+CL Sbjct 6133 CKYLDVQKERV--KLQDAHDAICQQFHGDSHEALCDAVMTKCL 6173 >RecName: Full=Nucleoprotein; AltName: Full=Nucleocapsid protein; Short=Protein N [Groundnut ringspot virus] Sequence ID: P36294.1 Length: 258 Range 1: 88 to 191 Score:34.7 bits(78), Expect:1.3, Method:Compositional matrix adjust., Identities:30/105(29%), Positives:49/105(46%), Gaps:8/105(7%) Query 46 PKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRH--VRAWIGFDVEGCHATRDAV-- 101 KDMT+RRL SM+ K+ + N+ I + + H V+A+ G ++ + R A+ Sbjct 88 AKDMTFRRLDSMIRVKLIEETANNENLAIIKAKIASHPLVQAY-GLPLDDAKSVRLAIML 146 Query 102 GTNLPLQLGFSTGVNLVAVPTGYVDT---ENNTEFTRVNAKPPPG 143 G ++PL + + V Y D+ E E T+ N K G Sbjct 147 GGSIPLIASVDSLEMISVVLAIYQDSQVQELGIEPTKYNTKEALG 191 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Serratia proteamaculans 568] Sequence ID: A8GAD4.1 Length: 417 Range 1: 332 to 365 Score:34.3 bits(77), Expect:2.6, Method:Compositional matrix adjust., Identities:17/37(46%), Positives:22/37(59%), Gaps:3/37(8%) Query 260 HCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEY 296 H + HG +H DAI+TR L+ E FV+ VD S Y Sbjct 332 HIRTHGTSH---SDAILTRSLSSAEHFVRAVDSSAVY 365 >RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing]; AltName: Full=NAD(+) synthetase [Oryza sativa Indica Group] Sequence ID: A2YII8.1 Length: 735 >RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing]; AltName: Full=NAD(+) synthetase [Oryza sativa Japonica Group] Sequence ID: Q0D8D4.2 Length: 735 Range 1: 134 to 240 Score:33.5 bits(75), Expect:4.5, Method:Compositional matrix adjust., Identities:32/112(29%), Positives:46/112(41%), Gaps:14/112(12%) Query 318 KSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIEELFYSYATHHDKF 377 K AL+ + P+ DI + VP +F D S+ EELF + A D Sbjct 134 KDALVDFQLPL--DISEVTSQDTVPFGYGFIQFLDVSLASETC---EELFTANAPRIDLA 188 Query 378 TDGVCLFWNCNVDRYPANAIVCRFDTRVLSNL---------NLPGCDGGSLY 420 +GV +F N + + + R D+ + L N GCDGG LY Sbjct 189 LNGVEVFVNASGSHHQLRKLSLRIDSMRNATLACGGVYMYANQQGCDGGRLY 240 >RecName: Full=Multiple epidermal growth factor-like domains protein 8; Short=Multiple EGF-like domains protein 8; AltName: Full=Epidermal growth factor-like protein 4; Short=EGF-like protein 4; Flags: Precursor [Homo sapiens] Sequence ID: Q7Z7M0.2 Length: 2845 Range 1: 943 to 1021 Score:33.9 bits(76), Expect:5.0, Method:Composition-based stats., Identities:24/86(28%), Positives:34/86(39%), Gaps:10/86(11%) Query 203 PERTCCLCDKRATCFSTSSDTYAC-WNHSVGFDYVYNPFMIDVQQWGFTGNLQSNHDQHC 261 PE LC +R TC +++ C W S +++ ++ G G S Sbjct 943 PEECPPLCSQRLTCEDCLANSSQCAWCQSTHTCFLFAAYLARYPHGGCRGWDDS------ 996 Query 262 QVHGNAHVASCDAIMT--RCLAVHEC 285 VH SCD +T CL HEC Sbjct 997 -VHSEPRCRSCDGFLTCHECLQSHEC 1021 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Pectobacterium atrosepticum SCRI1043] Sequence ID: Q6D1I4.1 Length: 417 Range 1: 332 to 365 Score:33.1 bits(74), Expect:5.2, Method:Compositional matrix adjust., Identities:17/37(46%), Positives:21/37(56%), Gaps:3/37(8%) Query 260 HCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEY 296 H + HG H DAI+TR L+ E FV+ VD S Y Sbjct 332 HIREHGTQH---SDAILTRSLSNAERFVREVDSSAVY 365 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Serratia marcescens] Sequence ID: P17857.1 Length: 417 Range 1: 332 to 365 Score:33.1 bits(74), Expect:5.7, Method:Compositional matrix adjust., Identities:17/37(46%), Positives:21/37(56%), Gaps:3/37(8%) Query 260 HCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEY 296 H + HG H DAI+TR L+ E FV+ VD S Y Sbjct 332 HIRTHGTNH---SDAILTRSLSSAEHFVRAVDSSAVY 365 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Pectobacterium carotovorum subsp. carotovorum PC1] Sequence ID: C6DCX4.1 Length: 417 Range 1: 332 to 365 Score:32.7 bits(73), Expect:7.8, Method:Compositional matrix adjust., Identities:17/37(46%), Positives:20/37(54%), Gaps:3/37(8%) Query 260 HCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEY 296 H + HG H DAI+TR L E FV+ VD S Y Sbjct 332 HIREHGTQH---SDAILTRSLTNAERFVREVDSSAVY 365 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pestis Pestoides F] Sequence ID: A4TPK0.1 Length: 419 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pestis Angola] Sequence ID: A9R2X0.1 Length: 419 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pestis Antiqua] Sequence ID: Q1C4E7.1 Length: 419 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pestis Nepal516] Sequence ID: Q1CLC6.1 Length: 419 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pestis] Sequence ID: Q8ZC09.1 Length: 419 Range 1: 334 to 367 Score:32.7 bits(73), Expect:8.4, Method:Compositional matrix adjust., Identities:17/37(46%), Positives:22/37(59%), Gaps:3/37(8%) Query 260 HCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEY 296 H + HG +H DAI+TR L+ E FV+ VD S Y Sbjct 334 HIREHGTSH---SDAILTRSLSHAEYFVRAVDSSAVY 367 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pseudotuberculosis IP 31758] Sequence ID: A7FLI1.1 Length: 419 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pseudotuberculosis YPIII] Sequence ID: B1JIH2.1 Length: 419 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pseudotuberculosis PB1/+] Sequence ID: B2K6Q4.1 Length: 419 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia pseudotuberculosis IP 32953] Sequence ID: Q66DY8.1 Length: 419 Range 1: 334 to 367 Score:32.7 bits(73), Expect:8.6, Method:Compositional matrix adjust., Identities:17/37(46%), Positives:22/37(59%), Gaps:3/37(8%) Query 260 HCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEY 296 H + HG +H DAI+TR L+ E FV+ VD S Y Sbjct 334 HIREHGTSH---SDAILTRSLSHAEYFVRAVDSSAVY 367 >RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase [Yersinia enterocolitica subsp. enterocolitica 8081] Sequence ID: A1JNX6.1 Length: 419 Range 1: 334 to 367 Score:32.3 bits(72), Expect:9.2, Method:Compositional matrix adjust., Identities:17/37(46%), Positives:21/37(56%), Gaps:3/37(8%) Query 260 HCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEY 296 H + HG +H DAI+TR L E FV+ VD S Y Sbjct 334 HIREHGTSH---SDAILTRSLGNAEHFVRAVDSSAVY 367 >RecName: Full=Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; AltName: Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; AltName: Full=Demethylmenaquinone methyltransferase [Bordetella pertussis Tohama I] Sequence ID: Q7W0H1.1 Length: 258 >RecName: Full=Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; AltName: Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; AltName: Full=Demethylmenaquinone methyltransferase [Bordetella parapertussis 12822] Sequence ID: Q7W3N6.1 Length: 258 >RecName: Full=Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; AltName: Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; AltName: Full=Demethylmenaquinone methyltransferase [Bordetella bronchiseptica RB50] Sequence ID: Q7WF12.1 Length: 258 Range 1: 9 to 50 Score:32.0 bits(71), Expect:9.5, Method:Compositional matrix adjust., Identities:15/42(36%), Positives:24/42(57%), Gaps:1/42(2%) Query 339 KCVPQAEVEWKF-YDAQPCSDKAYKIEELFYSYATHHDKFTD 379 + PQ E F + + P +DKA K+ E+F+S A+ +D D Sbjct 9 ESAPQGEQSTHFGFQSVPEADKARKVAEVFHSVASRYDVMND 50 >RecName: Full=Baeyer-Villiger monooxygenase; Short=BVMO [Streptomyces coelicolor A3(2)] Sequence ID: Q9RL17.1 Length: 603 Range 1: 132 to 223 Score:32.7 bits(73), Expect:9.6, Method:Compositional matrix adjust., Identities:29/93(31%), Positives:37/93(39%), Gaps:8/93(8%) Query 347 EWKFYDAQPCSDKAYKIEELFYSY-----ATHHDKFT-DGVCLFWNCNVDRYPA-NAIVC 399 EWK+ + A +I E F Y +T + D W DR+ A A Sbjct 132 EWKYAPGEEIRRHAMRIAETFDLYTDVLFSTAVTSLSWDDTTGEWIVETDRHDAFRATYV 191 Query 400 RFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFD 432 T VLS L LPG G + H FHT +D Sbjct 192 ITATGVLSELKLPGIPGIERF-KGHTFHTSRWD 223 >RecName: Full=Transmembrane 9 superfamily member 5; AltName: Full=Endomembrane protein 11; AltName: Full=Transmembrane nine protein 5; Short=AtTMN5; Flags: Precursor [Arabidopsis thaliana] Sequence ID: F4HW17.1 Length: 589 Range 1: 77 to 156 Score:32.3 bits(72), Expect:10.0, Method:Compositional matrix adjust., Identities:24/85(28%), Positives:40/85(47%), Gaps:6/85(7%) Query 188 HGFELTSMKYFVKIGPERT-CCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQ 246 +G L S Y +K ++T LC KR T SSD A + + DY + + D+ Sbjct 77 NGDRLMSSLYKLKFREDKTHFVLCRKRLT----SSDI-ARFRDIIAQDYYFQMYYDDLPL 131 Query 247 WGFTGNLQSNHDQHCQVHGNAHVAS 271 WGF G ++ ++ + H ++ S Sbjct 132 WGFVGKVEGDYFGQGEKHTKYYIFS 156