Мнемоника: SALTY
Аннотированных записей с ключевым словом "Purine biosynthesis" : 10
AC записи EMBL: AE006468; AE008693-AE008916
| Entry | Entry name | Status | Protein names | Gene names | Organism | Length | |
|---|---|---|---|---|---|---|---|
| P74881 | PUR4_SALTY | reviewed | Phosphoribosylformylglycinamidine synthase (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribonucleotide amidotransferase) (FGAR amidotransferase) (FGAR-AT) | purL STM2565 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 1295 | complement(2708255..2712142) |
| Q8ZNW5 | PURT_SALTY | reviewed | Formate-dependent phosphoribosylglycinamide formyltransferase (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (EC 2.1.2.-) (GAR transformylase 2) (GART 2) (Non-folate glycinamide ribonucleotide transformylase) (Phosphoribosylglycinamide formyltransferase 2) | purT STM1883 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 392 | 1975661..1976839 |
| P65882 | PURA_SALTY | reviewed | Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase) | purA STM4366 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 432 | 4609047..4610409 |
| P58688 | FOLD_SALTY | reviewed | Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] | folD STM0542 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 288 | complement(602705..603588) |
| P26977 | PUR2_SALTY | reviewed | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) | purD STM4175 STMF1.31 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 429 | complement(4391174..4392475) |
| Q8ZN60 | GUAA_SALTY | reviewed | GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase) | guaA STM2510 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 525 | complement(2622804..2624396) |
| O68446 | PURR_SALTY | reviewed | HTH-type transcriptional repressor PurR (Pur regulon repressor) (Purine nucleotide synthesis repressor) | purR STM1430 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 341 | complement(1507911..1509032) |
| P26978 | PUR9_SALTY | reviewed | Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)] | purH STM4176 STMF1.30 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 529 | complement(4392475..4394201) |
| P74883 | PUR5_SALTY | reviewed | Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) | purM STM2499 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 345 | 2613008..2614109 |
| P65889 | PUR7_SALTY | reviewed | Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase) | purC STM2487 | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) | 237 | complement(2602103..2602982) |
Fasta-файл c вырезанными Upstream-регионами
Была использована команда ememe upstream.fasta meme -nmotifs 3 -revcomp
Вывод программы meme в формате html
Нашлось всего 3 хороших мотива. Представленность мотивов в последовательностях отражена на картинке(каждый мотив изображен своим цветом):
