RID: 3NTEWU8301N Job Title:Putative RNA-directed RNA polymerase/helicase... Program: BLASTP Query: Putative RNA-directed RNA polymerase/helicase from POLG_ASGVP P36309 Genome polyprotein ID: lcl|Query_306458(amino acid) Length: 1868 Database: nr All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession 241k polyprotein [Apple stem grooving virus] Apple stem g... NA 28347 3876 3876 100% 0.0 100.00 2105 NP_044335.1 replicase [Diuris virus B] Diuris virus B NA 1247116 578 578 86% 3e-168 30.26 2225 YP_006905848.1 polyprotein [Cherry virus A] Cherry virus A NA 42882 551 551 84% 2e-158 28.75 2344 ARQ83882.1 polyprotein [Cherry virus A] Cherry virus A NA 42882 550 550 84% 5e-158 28.79 2344 ARQ83888.1 polyprotein [Apple stem grooving virus] Apple stem g... NA 28347 494 494 15% 3e-157 86.97 284 AFM37535.1 polyprotein [Cherry virus A] Cherry virus A NA 42882 543 543 84% 1e-155 28.52 2342 ARQ83946.1 polyprotein [Cherry virus A] Cherry virus A NA 42882 538 538 84% 7e-154 28.43 2342 BCA25827.1 replicase-associated protein [Apple stem grooving virus] Apple stem g... NA 28347 477 477 12% 9e-152 96.98 232 UVV38559.1 Alignments: >241k polyprotein [Apple stem grooving virus] Sequence ID: NP_044335.1 Length: 2105 >RecName: Full=Genome polyprotein; AltName: Full=241 kDa polyprotein; AltName: Full=ORF1 polyprotein; Contains: RecName: Full=Putative RNA-directed RNA polymerase/helicase; Contains: RecName: Full=Coat protein [Apple stem grooving virus (strain P-209)] Sequence ID: P36309.1 Length: 2105 >241k polyprotein [Apple stem grooving virus] Sequence ID: BAA03639.1 Length: 2105 Range 1: 1 to 1868 Score:3876 bits(10052), Expect:0.0, Method:Compositional matrix adjust., Identities:1868/1868(100%), Positives:1868/1868(100%), Gaps:0/1868(0%) Query 1 MAFTYRNPLEIAINKLPSKQSDQLLSLTTDEIEKTLEVTNRFFSFSITPEDQELLTKHGL 60 MAFTYRNPLEIAINKLPSKQSDQLLSLTTDEIEKTLEVTNRFFSFSITPEDQELLTKHGL Sbjct 1 MAFTYRNPLEIAINKLPSKQSDQLLSLTTDEIEKTLEVTNRFFSFSITPEDQELLTKHGL 60 Query 61 TLAPIGFKSHSHPISKMIENHLLYICVPSLLSSFKSVAFFSLRENKVDSFLKMHSVFSHG 120 TLAPIGFKSHSHPISKMIENHLLYICVPSLLSSFKSVAFFSLRENKVDSFLKMHSVFSHG Sbjct 61 TLAPIGFKSHSHPISKMIENHLLYICVPSLLSSFKSVAFFSLRENKVDSFLKMHSVFSHG 120 Query 121 KIKSLGMYNAIIDGKDKYRYGDVEFSSFRDRVIGLRDQCLTRNKFPKVLFLHDELHFLSP 180 KIKSLGMYNAIIDGKDKYRYGDVEFSSFRDRVIGLRDQCLTRNKFPKVLFLHDELHFLSP Sbjct 121 KIKSLGMYNAIIDGKDKYRYGDVEFSSFRDRVIGLRDQCLTRNKFPKVLFLHDELHFLSP 180 Query 181 FDMAFLFETIPEIDRVVATTVFPIELLFGDKVSKEPRVYTYKVHGSSFSFYPDGVASECY 240 FDMAFLFETIPEIDRVVATTVFPIELLFGDKVSKEPRVYTYKVHGSSFSFYPDGVASECY Sbjct 181 FDMAFLFETIPEIDRVVATTVFPIELLFGDKVSKEPRVYTYKVHGSSFSFYPDGVASECY 240 Query 241 EQNLANSKWPFTCSGIQWANRKIRVTKLQSLFAHHVFSFDRGRACNEFNHFDKPSCLLAE 300 EQNLANSKWPFTCSGIQWANRKIRVTKLQSLFAHHVFSFDRGRACNEFNHFDKPSCLLAE Sbjct 241 EQNLANSKWPFTCSGIQWANRKIRVTKLQSLFAHHVFSFDRGRACNEFNHFDKPSCLLAE 300 Query 301 EMRLLTKRFDKAVINRSTVSSLSTYMACLKTANAASAVAKLRQLEKRDLYPDELNFVYSF 360 EMRLLTKRFDKAVINRSTVSSLSTYMACLKTANAASAVAKLRQLEKRDLYPDELNFVYSF Sbjct 301 EMRLLTKRFDKAVINRSTVSSLSTYMACLKTANAASAVAKLRQLEKRDLYPDELNFVYSF 360 Query 361 GEHFKNFGMRDDFDVSVLQWVKDKFCQVMPHFIAASFFEPTEFHLNMRKLLNDLATKGIE 420 GEHFKNFGMRDDFDVSVLQWVKDKFCQVMPHFIAASFFEPTEFHLNMRKLLNDLATKGIE Sbjct 361 GEHFKNFGMRDDFDVSVLQWVKDKFCQVMPHFIAASFFEPTEFHLNMRKLLNDLATKGIE 420 Query 421 VPLSVIILDKVNFIETRFHARMFDIAQAIGVNLDLLGKRFDYEAESEEYFSENGYIFMPS 480 VPLSVIILDKVNFIETRFHARMFDIAQAIGVNLDLLGKRFDYEAESEEYFSENGYIFMPS Sbjct 421 VPLSVIILDKVNFIETRFHARMFDIAQAIGVNLDLLGKRFDYEAESEEYFSENGYIFMPS 480 Query 481 KSNPERNWILNSGSLKIDYSRLVRARRFRLRRDFLDPISKGKSPRKQLFLESTGNIKSNP 540 KSNPERNWILNSGSLKIDYSRLVRARRFRLRRDFLDPISKGKSPRKQLFLESTGNIKSNP Sbjct 481 KSNPERNWILNSGSLKIDYSRLVRARRFRLRRDFLDPISKGKSPRKQLFLESTGNIKSNP 540 Query 541 NAEKNSESGEIKIEGSAENDQPHEVSHTSMETEDGQGFEGSIPVDLINCFEPEEIKLPKR 600 NAEKNSESGEIKIEGSAENDQPHEVSHTSMETEDGQGFEGSIPVDLINCFEPEEIKLPKR Sbjct 541 NAEKNSESGEIKIEGSAENDQPHEVSHTSMETEDGQGFEGSIPVDLINCFEPEEIKLPKR 600 Query 601 RRKNDCVFKAISAHLGIDSQDLLNFLVNEDISDELLDCIEEDKGLSHEMIEEVLITKGLS 660 RRKNDCVFKAISAHLGIDSQDLLNFLVNEDISDELLDCIEEDKGLSHEMIEEVLITKGLS Sbjct 601 RRKNDCVFKAISAHLGIDSQDLLNFLVNEDISDELLDCIEEDKGLSHEMIEEVLITKGLS 660 Query 661 MVYTSDFKEMAVLNRKYGVNGKMYCTIKGNHCELSSKECFIRLLKEGGEAQMSNENLNAD 720 MVYTSDFKEMAVLNRKYGVNGKMYCTIKGNHCELSSKECFIRLLKEGGEAQMSNENLNAD Sbjct 661 MVYTSDFKEMAVLNRKYGVNGKMYCTIKGNHCELSSKECFIRLLKEGGEAQMSNENLNAD 720 Query 721 SLFDLGRFVHNRDRAVKLAKSMARGTTGLLNEFDLEFCKNMVTLSELFPENFSSVVGLRL 780 SLFDLGRFVHNRDRAVKLAKSMARGTTGLLNEFDLEFCKNMVTLSELFPENFSSVVGLRL Sbjct 721 SLFDLGRFVHNRDRAVKLAKSMARGTTGLLNEFDLEFCKNMVTLSELFPENFSSVVGLRL 780 Query 781 GFAGSGKTHKVLQWINYTPSVKRMFISPRRMLADEVEPQLKGTACQVHTWETALKKIDGT 840 GFAGSGKTHKVLQWINYTPSVKRMFISPRRMLADEVEPQLKGTACQVHTWETALKKIDGT Sbjct 781 GFAGSGKTHKVLQWINYTPSVKRMFISPRRMLADEVEPQLKGTACQVHTWETALKKIDGT 840 Query 841 FMEVFVDEIGLYPPGYLTLLQMCAFRKIVKGQSENFLKGKLLELSKTCLNIRCFGDPLQL 900 FMEVFVDEIGLYPPGYLTLLQMCAFRKIVKGQSENFLKGKLLELSKTCLNIRCFGDPLQL Sbjct 841 FMEVFVDEIGLYPPGYLTLLQMCAFRKIVKGQSENFLKGKLLELSKTCLNIRCFGDPLQL 900 Query 901 RYYSAEDTNLLDKTHDIDLMIKTIKHKYLFQGYRFGQWFQELVNMPTRVDESKFSRKFFA 960 RYYSAEDTNLLDKTHDIDLMIKTIKHKYLFQGYRFGQWFQELVNMPTRVDESKFSRKFFA Sbjct 901 RYYSAEDTNLLDKTHDIDLMIKTIKHKYLFQGYRFGQWFQELVNMPTRVDESKFSRKFFA 960 Query 961 DISSVKTEDYGLILVAKREDKGVFAGRVPVATVSESQGMTISKRVLICLDQNLFAGGANA 1020 DISSVKTEDYGLILVAKREDKGVFAGRVPVATVSESQGMTISKRVLICLDQNLFAGGANA Sbjct 961 DISSVKTEDYGLILVAKREDKGVFAGRVPVATVSESQGMTISKRVLICLDQNLFAGGANA 1020 Query 1021 AIVAITRSKVGFDFILKGNSLKEVQRMAQKTIWQFIIEGKSIPMERIVNMNPGASFYESP 1080 AIVAITRSKVGFDFILKGNSLKEVQRMAQKTIWQFIIEGKSIPMERIVNMNPGASFYESP Sbjct 1021 AIVAITRSKVGFDFILKGNSLKEVQRMAQKTIWQFIIEGKSIPMERIVNMNPGASFYESP 1080 Query 1081 LDVGNSSIQDKASNDLFIMPFINLAEEEVDPEEVVGDVIQPVEWFKCHVPVFDTDPTLAE 1140 LDVGNSSIQDKASNDLFIMPFINLAEEEVDPEEVVGDVIQPVEWFKCHVPVFDTDPTLAE Sbjct 1081 LDVGNSSIQDKASNDLFIMPFINLAEEEVDPEEVVGDVIQPVEWFKCHVPVFDTDPTLAE 1140 Query 1141 IFDKVAAKEKREFQSVLGLSNQFLDMEKNGCKIDILPFARQNVFPHHQASDDVTFWAGVQ 1200 IFDKVAAKEKREFQSVLGLSNQFLDMEKNGCKIDILPFARQNVFPHHQASDDVTFWAGVQ Sbjct 1141 IFDKVAAKEKREFQSVLGLSNQFLDMEKNGCKIDILPFARQNVFPHHQASDDVTFWAGVQ 1200 Query 1201 KRIRKSNWRREKSKFEEFESQGKELLQEFISMLPFEFKVNIKEIEDGEKSFLEKRKLKSE 1260 KRIRKSNWRREKSKFEEFESQGKELLQEFISMLPFEFKVNIKEIEDGEKSFLEKRKLKSE Sbjct 1201 KRIRKSNWRREKSKFEEFESQGKELLQEFISMLPFEFKVNIKEIEDGEKSFLEKRKLKSE 1260 Query 1261 KMWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACFQHIVLFRFGPMLR 1320 KMWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACFQHIVLFRFGPMLR Sbjct 1261 KMWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACFQHIVLFRFGPMLR 1320 Query 1321 AIESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVFDGFSIESDYTAFDSSQDHVILAFE 1380 AIESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVFDGFSIESDYTAFDSSQDHVILAFE Sbjct 1321 AIESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVFDGFSIESDYTAFDSSQDHVILAFE 1380 Query 1381 MALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNTFANMLFTQLKYKI 1440 MALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNTFANMLFTQLKYKI Sbjct 1381 MALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNTFANMLFTQLKYKI 1440 Query 1441 DPRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFSLTAVEEVRKFPMFCGWYLSPYGII 1500 DPRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFSLTAVEEVRKFPMFCGWYLSPYGII Sbjct 1441 DPRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFSLTAVEEVRKFPMFCGWYLSPYGII 1500 Query 1501 KSPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKEEDFEYHYLVIRFFV 1560 KSPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKEEDFEYHYLVIRFFV Sbjct 1501 KSPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKEEDFEYHYLVIRFFV 1560 Query 1561 RNSKLLTGLSKSLIFEIGEGIGSKWLSSTSTASSRRSNLQTSKLMLSRPQSFTRMQPFSN 1620 RNSKLLTGLSKSLIFEIGEGIGSKWLSSTSTASSRRSNLQTSKLMLSRPQSFTRMQPFSN Sbjct 1561 RNSKLLTGLSKSLIFEIGEGIGSKWLSSTSTASSRRSNLQTSKLMLSRPQSFTRMQPFSN 1620 Query 1621 QTCLIASKGLNQTSRFPLDLVTASSCLISNCLMTPKLIQSGRKATSTNTYTMESSWLGSK 1680 QTCLIASKGLNQTSRFPLDLVTASSCLISNCLMTPKLIQSGRKATSTNTYTMESSWLGSK Sbjct 1621 QTCLIASKGLNQTSRFPLDLVTASSCLISNCLMTPKLIQSGRKATSTNTYTMESSWLGSK 1680 Query 1681 QCCQTLEAWKGESLYMMEPAWIRKEATFARIFSSLSLTVATLVSGQSTVCLPQTQIWPKG 1740 QCCQTLEAWKGESLYMMEPAWIRKEATFARIFSSLSLTVATLVSGQSTVCLPQTQIWPKG Sbjct 1681 QCCQTLEAWKGESLYMMEPAWIRKEATFARIFSSLSLTVATLVSGQSTVCLPQTQIWPKG 1740 Query 1741 LDFVWTLIVHNMNRTLSCLLLTLELHTDASTLQGFWKPKLAIQDGLHRQSAAVKHLNSMR 1800 LDFVWTLIVHNMNRTLSCLLLTLELHTDASTLQGFWKPKLAIQDGLHRQSAAVKHLNSMR Sbjct 1741 LDFVWTLIVHNMNRTLSCLLLTLELHTDASTLQGFWKPKLAIQDGLHRQSAAVKHLNSMR 1800 Query 1801 KSRWPSWIADPRCFWKKVHQTCTLKRDCSEVTRLEGHAQFPLKGGQTQGCKKREDLGPSR 1860 KSRWPSWIADPRCFWKKVHQTCTLKRDCSEVTRLEGHAQFPLKGGQTQGCKKREDLGPSR Sbjct 1801 KSRWPSWIADPRCFWKKVHQTCTLKRDCSEVTRLEGHAQFPLKGGQTQGCKKREDLGPSR 1860 Query 1861 LELKDLEK 1868 LELKDLEK Sbjct 1861 LELKDLEK 1868 >replicase [Diuris virus B] Sequence ID: YP_006905848.1 Length: 2225 >replicase [Diuris virus B] Sequence ID: AFV57240.1 Length: 2225 Range 1: 1 to 1694 Score:578 bits(1491), Expect:3e-168, Method:Compositional matrix adjust., Identities:531/1755(30%), Positives:809/1755(46%), Gaps:205/1755(11%) Query 1 MAFTYRNPLEIAINKLPSKQSDQLLSLTTDEIEKTLEVTNRFFSFSITPEDQELLTKHGL 60 MA +YR P E+ IN+LP++ +D L D ++ + +F +FS+T + ++ L + G+ Sbjct 1 MALSYRTPTELLINQLPARLTDNLAVKQVDILQSEEDSYGQFLNFSLTKDQRKFLVEKGV 60 Query 61 TLAPIGFKSHSHPISKMIENHLLYICVPSLLSSF---KSVAFFSLRENKVDSFLKMHSVF 117 L+P +K HSHP K IEN LLY + + + ++AF SLRE K+++ K+H F Sbjct 61 YLSPYSWKHHSHPACKTIENWLLYKEIGNHVKHVCKDATIAFISLREGKLNALKKIH--F 118 Query 118 SHGKIKSLG----MYNAIIDGKDKYRY---GDVE--FSSFRDRVIGLRDQCLTRNKFPKV 168 S + K L +N GKDK RY GD E +SSF DQ + Sbjct 119 SGKEDKKLSEKITSFNRYYCGKDKLRYRNSGDREVIYSSF--------DQIRQKTGPNAS 170 Query 169 LFLHDELHFLSPFDM-AFLFETIPEIDRVVATTVFPIELLFGDKVSKEPRVYTYKVHGSS 227 ++HDE H+ SP D+ AFL +T + ++AT + P E G S P +Y ++V + Sbjct 171 YYIHDECHYWSPQDLGAFLGKT--QASSILATIIHPTEYEAGKDTSHLPFLYQFEVENNK 228 Query 228 FSFYPDGVASECYEQNLANSKWPFTCSGIQWANRKIRVTKLQSLFAHHVFSFDRG----- 282 F+PDG SE YEQ + + W S + +T L+S+ H+ +G Sbjct 229 LFFFPDGNRSEGYEQP-STAGWWLRMSRFFFDGEVYSITLLRSIGPFHLVYLSKGSLTIE 287 Query 283 --RACNEFNHFDKPSCLLAEEMRLLTKRFDKA--VINRSTVSSLSTYMACLKTANAASAV 338 R ++FN D P + KA ++ + + +Y+ LK + SAV Sbjct 288 TKRFFDDFNILDIPVKFYKNNI------VGKANLILRTGFMIKIVSYLKSLKKPDRESAV 341 Query 339 AKLRQLEKRDLYPDELNFVYSFGEHFKNFGMRDDFDVSVLQWVKDKFCQVMP-------- 390 AKLR + + D +EL FV + + G R ++ +W+ MP Sbjct 342 AKLRMMSEEDFSVEELMFVEGLAQTLMSDGYRSIWEQGWNEWIISGLRDCMPDAIHQGIF 401 Query 391 --HFIAASFFE-------------PTEFH----LNMRKLL-----NDLATKGIEVPLSVI 426 HF A FE +++ L RK L +D + K + +I Sbjct 402 RKHFKAKQNFELLANLKSLKVVLRTDDYNDKSVLTQRKFLLSFGEHDNSQKANDKICDII 461 Query 427 ILDKVN-----------FIETRFHARMFDIA-QAIGVNLDLLGKRFDYE--AESEEYFSE 472 VN F+E +MF I + ++L ++ YE E Sbjct 462 RSQSVNDYLGGPNVSEYFLEKDTRGQMFFIFFEKRQKPVELRTEKMTYEDCIELTMKNDS 521 Query 473 NGYIFMPS--KSNPERNWILNSGSLKIDYSRLVRA----RRFRL------------RRDF 514 + YI+ S K NP+R I + K++ S+ R R F++ F Sbjct 522 DNYIYRKSVFKQNPKRFDI----ACKLNISKAKRIKDTYRIFKISCIPDFYRSKIFESKF 577 Query 515 LDPISKGKSPRKQL-FLESTGNIKSNPNAEKNSESGEIKIEGSAENDQPHEVSHTSMETE 573 + ++ G + K + FL S N + N + E K E S N+ E + SM Sbjct 578 VMMLADGFNMDKLIVFLISGANTEKNKIKWSTDQVQEEKAESSKRNELKEE--YFSM--- 632 Query 574 DGQGFEGSIPVDLINCFEPEEIKLPKRRR------------------KNDCVFKAISAHL 615 FE + L E EE+ L ++ + KN C F++I Sbjct 633 ----FEKEEEIILSETDEEEEVPLQRKSQEMELKESNEIDEKAFCNLKNKCCFESIMQSQ 688 Query 616 GIDSQDLLNFLVNEDISDELLDCIEEDKGLSHEMIEEVLITKGLSMVYTSDFKEMAVLNR 675 +LL+ + +++D DKGL + + E++ +++ ++ LN+ Sbjct 689 NWSYDNLLDAMKGTVFIQKMID----DKGLLVDELVELIKKININVNVVDSAGKLIELNK 744 Query 676 KYGVNGKMYCTIKGNHCELSSKECFIRLLKEGGEAQMSNENLNADSLFDLGRFVHNRDRA 735 + + NHC+ ++ + + + NE +N + + + +RA Sbjct 745 ----GAEKVLLLSSNHCKFTTMDSVNHW--KLNDCSFLNEIMNTNYII---KETAVYERA 795 Query 736 VKLAKSMARGTTGLL--------NEFDLEFCKNMV--TLSELFPE---NFS-------SV 775 KL KS++ G TG++ +E D KN V L LF + NF+ + Sbjct 796 SKLYKSISSGNTGVMLHEMLKKNSETDRTNKKNRVLEVLKLLFDDENDNFNRTCQSKGPI 855 Query 776 VGLRLGFAGSGKTHKVLQWINYTPSVKRMF--ISPRRMLADEVEPQLKGTACQVH--TWE 831 G+ GFAGSGK+ V +I + + MF ISPR L + + ++ V T+E Sbjct 856 YGI-FGFAGSGKSKGVQDYILKPENDENMFTLISPRNELLADWKKKIGEEKKNVRFLTYE 914 Query 832 TALKKIDGTFMEVFVDEIGLYPPGYLTLLQMCAFRKIVKGQSENFLKGKLLE--LSKTCL 889 AL V VDE+ LYPPGY++LLQ+ K K L + + + Sbjct 915 KALASSYDENELVIVDELSLYPPGYISLLQVVTKIKTDKISGNIRLSKRNYSNYMGDRNV 974 Query 890 NIRCFGDPLQLRYYSAEDTNLLDKTHDIDLMIKTIKHKYLFQGYRFGQ-WFQELVNMPTR 948 +I GD LQ RYY+ DT L + +ID +++ + YL R + F + Sbjct 975 SIMVLGDHLQNRYYNESDTRKLSQVDEIDFIMENEEIIYLNYSLRLCKDHFYKPGIKKLG 1034 Query 949 VDESKFSRKFFADISSVKTEDYGLILVAKREDKGVFAGRVPVATVSESQGMTISKRVLIC 1008 ++K SR+F + K +LVA R D+ + + V T ESQG+T V+I Sbjct 1035 EGKAKTSRRFQNVYVAKKAMPDAQLLVASR-DEAIRFKNLDVKTFGESQGLTFDD-VIIT 1092 Query 1009 LDQNLFAGGANAAIVAITRSKVGFDFILKG-NSLKEVQRMAQKTIWQFIIEGKSIPMERI 1067 L VA+TR++ G F L G +++ + + T +I G + + Sbjct 1093 LSPPAVNCSLQMWNVAMTRARYGVHFALNGFDTVDDFLNKVKGTPINAMILGVNFDIHNN 1152 Query 1068 VNMNPGASF---YESPLDVGNSSIQDKASNDLFIMPFINLAEEEVDPEEVVGDVIQPVEW 1124 V + G ++ Y + + ++ K D F+ I + + E D+ Sbjct 1153 V-ITKGKNYNLIYVDKMGLNLEEVELKLQGDPFLKSIIPSLDNGLPVEMEYQDITLESPV 1211 Query 1125 FKCHVPVFDTDPTLAEIFDKVAAKEKREFQSVLGLSNQFLDMEKNGCKIDILPFAR--QN 1182 K H+P+ +A I + + +REF +S QF D K G +L + Q+ Sbjct 1212 PKIHLPIESIQGQVAFISSNLKERMQREFIGDGIISEQFPDFWKAGEPGYLLSQSERFQS 1271 Query 1183 VFPHHQASDDVTFWAGVQKRIRKSNWRREKSKFEEFESQGKELLQEFISMLPFEFKVNIK 1242 +FP H SD +TF+A V+KR++ S+ + E+ KFE+ G+E+L+ F+ KV + Sbjct 1272 IFPKHSNSDTLTFFAAVKKRLKFSSPQIEREKFEKVRHLGQEMLELFLE------KVKVS 1325 Query 1243 EIEDGE------KSFLEKRKLKSEKMWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFT 1296 D + ++EK+ K+ A HS RS+ DW L+ FLFMK+Q CTK K F Sbjct 1326 NHYDKQMELMSYNEYIEKKVAKTGNTIAAHSNRSEPDWNLNEIFLFMKTQLCTKYEKRFC 1385 Query 1297 EAKAGQTLACFQHIVLFRFGPMLRAIESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVF 1356 EAKAGQTLACF HIVL RF R IE ++YYIH KNF L+ +V +N F Sbjct 1386 EAKAGQTLACFSHIVLNRFAGPTRYIEKKISSYLPNNYYIHQKKNFDKLNEWVIENK--F 1443 Query 1357 DGFSIESDYTAFDSSQDHVILAFEMALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRF 1416 G S+ESDY AFDSSQD +ILAFE LL YLG ++ DYL +K LGCRLG+LA+MRF Sbjct 1444 TGESLESDYEAFDSSQDCIILAFEYELLSYLGWNQSLLDDYLTIKFNLGCRLGNLAVMRF 1503 Query 1417 TGEFCTFLFNTFANMLFTQLKYKIDPRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFS 1476 TGEF TFLFNT ANM FT + Y +D + I FAGDDMC +K+R R ++K + Sbjct 1504 TGEFGTFLFNTLANMTFTFMSYDLDD-KEAICFAGDDMCCNKPVKKRSDGRYDHILKRLT 1562 Query 1477 LTAVEEVRKFPMFCGWYLSPYGIIKSPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRL 1536 L A + P FCGW L+ +GI K P+L+ R + E+ LKE +D+Y E +AY L Sbjct 1563 LKAKVSYTREPTFCGWRLTKHGIFKKPELVLERFLIAMEKGRLKEVIDSYFIECSYAYNL 1622 Query 1537 GERLYTILKEEDFEYHYLVIRFFVRNSKLLTGLSKSLIFEIGEGIGSKWLSSTSTASSRR 1596 GERLY E+DF HY +R NS LL G+S S + EG G + S+ TA S Sbjct 1623 GERLYECFSEKDFIAHYCCVRIVHENSSLLKGVSLS---KFNEGTGYRLSCSSQTAPSSL 1679 Query 1597 SNLQTSKLMLSRPQS 1611 NL + LS S Sbjct 1680 KNLIMERETLSASSS 1694 >polyprotein [Cherry virus A] Sequence ID: ARQ83882.1 Length: 2344 Range 1: 1 to 1639 Score:551 bits(1420), Expect:2e-158, Method:Compositional matrix adjust., Identities:493/1715(29%), Positives:802/1715(46%), Gaps:209/1715(12%) Query 1 MAFTYRNPLEIAINKLPSKQSDQLLSLTTDEIEKTLEVTNRFFSFSITPEDQELLTKHGL 60 MAF + E N LPS +D L + E +R F+F++ P + L G+ Sbjct 1 MAFVAKFAEENYFNSLPSNVTDAFLRDGFNAEHNRFETLSRHFAFALKPSQRNYLNDCGI 60 Query 61 TLAPIGFKSHSHPISKMIENHLLYICVPSLLSSFKSVAFFSLRENKVDSFLKMHSVFSHG 120 LAPI K+H HP+SK IENHLLY V +++S FK + F S++E K + ++ + Sbjct 61 QLAPIASKTHPHPVSKTIENHLLYCVVSNMISDFKFLVFLSIKETKAEYIWNKNTPNTVR 120 Query 121 KIKSLGMYNAIIDGKDKYRYGDVE-----FSSFRDRVIGLRDQCLTRNKFPKVLFLHDEL 175 +I N I+D KD +RY ++F L + +R P F+HDE+ Sbjct 121 EIS-----NRILDIKDAFRYSQTNTVNGGLNNFSFFCANLARRFNSRAIKPDCFFIHDEV 175 Query 176 HFLSPFDMA-FLFETIPEIDRVVATTVFPIELLFGDKVSKEPRVYTYKVHGSSFSFYPDG 234 HF SP ++ FLF P+ V+AT V P EL+ G S Y ++ G + ++PD Sbjct 176 HFWSPSELCEFLFTIEPK--NVLATVVIPPELVEGLDYSFNSVAYDFQKVGGNLYYFPDK 233 Query 235 VASECYEQNLANSKWPFTCSGIQWANR----KIRVTKLQSLFAHHVFSFDRGRACNEFNH 290 + Y+Q + W +C+ I + L+S+ A+H+FSF R + Sbjct 234 SKGKPYQQPI--DSWLLSCNKISMVKNGETFSYSIGLLESIGANHLFSFQRNKVVESTRF 291 Query 291 FDKPSCLLAEEMR-LLTKRFDKAVINRSTVSS-----LSTYMACLKTANAASAVAKLRQL 344 F+ CL +MR LL + I + + + +Y+ CLK ++ S++AKLRQL Sbjct 292 FNDFDCL---DMRKLLPVNVENGKIRGYNIRTWVFRKILSYIVCLKKGDSESSLAKLRQL 348 Query 345 EKRDLYPDELNFVYSFGE---HFKNFGMRDDFDV------SVLQWV-------------K 382 PDEL + F + K F R +D + WV Sbjct 349 SDSSPSPDELLLIGDFFDLMTRVKVFNKRSPWDFLSDVRNYIDSWVIQSPFLRRIFPVGS 408 Query 383 DKFCQVMPHFIAASFFEPTEFHLNMRKLL-----NDLATKGIEVPLSVIILDKV--NFIE 435 +++ +IA + E +N + L+ + + T I +S IL+ V NF+ Sbjct 409 RAITELIRDWIANA--ESLRIQVNCKSLVFSSTFDQINTDCIS-SVSNSILNNVADNFLS 465 Query 436 T-----------RFHARMFDIAQAIGVNLDLLGKRFDYEAE----------SEEYFSENG 474 RF+ + + G+ +D ++ Y E ++S++ Sbjct 466 VIEACRNWTTRKRFNGGGYSMVSRNGLLVDSASQKISYSPEVYTDLFPSIVRPAFYSDSA 525 Query 475 YIFMPSKSNPERNWILNSGSLKIDYSRLVRARRFRLRRDFLDPISKGKSPRKQLFLESTG 534 + P + E W SGS D+ R+ RL + +ST Sbjct 526 F---PMLESFEPKWNYLSGSWVFDF------RQLRL-----------------CYQQSTS 559 Query 535 NIKSNPNAEKNSESGEIKIEGSAENDQPHEVSHTSMETEDGQGFEGSIPVDLINCFEPEE 594 + S + ++ S + + E +E+ P ++ E E G E S+ + E +E Sbjct 560 DDTSMKDDDEFSANNLKEKEEISESPNPSPFLNS--EVEKG---ETSLESKEVADSEQDE 614 Query 595 IKLPKRRRKNDCVFKAISAHLGIDSQDLLNFLVNEDISDELLDCIEE---DKGLSHEMIE 651 K RKN C F+A+ +G+ + ++N ++ ++ L +E+ D +S +++E Sbjct 615 ----KNVRKNACFFEAVGETIGVSANSMINKILCSNLP-ALQPVVEQLMLDHPMSSKLLE 669 Query 652 --------EVLITKGLSMVYTSDFKEMAVLNRKYGVNGKMYCTIKGNHCELSSKE----- 698 V I G S++ +D M ++ G G ++C K L + Sbjct 670 ICCEFLGYRVHIYYGDSIIKLNDNANMHAIHIG-GKPGHLFCINKEGIRTLRDGQLKDPE 728 Query 699 ---------CFIRLLKEGGEAQMSNENLNADSLFDLGRFVHNRDRAVKLAKSMARGTTGL 749 F + G A ++ ++ L + + V++ + + Sbjct 729 VGPQVFIGSIFSKTYGMGSSAPINLSEIDISKSLTLISAFESMNLGVRVDRKAILEGQLI 788 Query 750 LNEFDLEFCKNMVTLSELFPENFSSV------VGLRLGFAGSGKTHKVL-QWINYTPSVK 802 N+F L F K E F S+ V +GFAGSGK+ ++ Q I+ S Sbjct 789 SNDF-LAFLKRKGN------EGFKSIKIQPIPVFPFIGFAGSGKSFGLIEQLIDGDCSQN 841 Query 803 RMFISPRRMLADEVEPQLKGTACQ----------VHTWETALKKIDGTFMEVFVDEIGLY 852 +F +PR+ + ++ ++ + T+E L + + V +DE L Sbjct 842 FIFTAPRKKIIGQIHDKIDSRQYEDKMKISRKKNFSTFENTLLSLINKPL-VVIDECSLN 900 Query 853 PPGYLTLLQMCAFRKIVKGQSENF---------LKGKLLELSKTCLNIRCFGDPLQLRYY 903 PPG++ LL + + I++ +++F +G + ++ + GD LQ +Y Sbjct 901 PPGFIDLLLLKSLDSIIRKSNKDFDFFFSSSILSEGIIANIASPVACLAATGDVLQSSFY 960 Query 904 SAEDTNLLDKTHDIDLM--IKTIKHKYLFQGYRFGQWFQELVNMP--TRVDESKFSRKFF 959 S L+ +D+ + + ++ YLF RFG +F + + +++ F+ Sbjct 961 SESCGKLMQCKNDLKTICSLSHLRLPYLFGSKRFG-YFSGFLKLGYYNQLESKAFTIDNM 1019 Query 960 ADI-SSVKT--EDYGLILVAKREDKGVFAGRVP-VATVSESQGMTISKRVLICLDQNLFA 1015 + +V T + +G +LV R DK F P V T++ESQG T + +LI + ++ F+ Sbjct 1020 GTLLKAVGTSMDKFG-VLVTSRADKSDFELDFPNVCTINESQGSTFNSVILI-VTRDFFS 1077 Query 1016 GGANAAIVAITRSKVGFDFILKGNSLKEVQRMAQK--TIWQFIIEGKSIPMERIVN-MNP 1072 IVAITR + E+ + ++ +++ SI + I + +NP Sbjct 1078 NPIETIIVAITRHQKNLLIYFPAAIKNEMDFLERRFPIHSNVVLKNFSILDDLIKDKLNP 1137 Query 1073 GASFYESPLDVGNSSIQDKASNDLFIMPFINLAEEEVDPEEVVGDVIQPVEWFKCHVPVF 1132 E P + K D F+ ++L E P+ + ++++ E K H+P+ Sbjct 1138 FQLVQEDPF---GHDFEIKLEGDPFLKSELSLVNEIKLPQ-IEENLVEVKENLKTHLPIS 1193 Query 1133 DTDPTLAEIFDKVAAKEKREFQSV-LGLSNQFLDMEKNGCKID----ILPFARQNVFPHH 1187 + EI ++ A+E+REF+ +G S QF D + +++ +LP A VFP H Sbjct 1194 YSGLWNLEI-SEMRAREEREFKKYGVGWSKQFKDEPNSRDQVEDNCAMLPEA---VFPRH 1249 Query 1188 QASDDVTFWAGVQKRIRKSNWRREKSKFEEFESQGKELLQEFISMLPFEFKVNIKEIEDG 1247 A+DD+TFW+ V+KR+ N FE+ + GKELL F+ +P + K +D Sbjct 1250 FANDDLTFWSAVKKRLIFKNPLSNAHDFEKAKPFGKELLDIFLKKVPLIPSFDQKMYDDS 1309 Query 1248 EKSFLEKRKLKSEKMWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACF 1307 F EK+ K+ M H +RS DW ++ FLF+KSQ CTK+ KMF +AKAGQTLACF Sbjct 1310 ITEFEEKKISKNAAMIGAHHDRSTTDWPINEIFLFIKSQLCTKKEKMFCDAKAGQTLACF 1369 Query 1308 QHIVLFRFGPMLRAIESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVFDGFSIESDYTA 1367 H++L +F P+ R IE +S ++YIH KNF L+ +V + F G ESDY A Sbjct 1370 SHLILCKFAPLNRYIEKKVTQSLPGNFYIHQKKNFDELEKWVKSHD--FSGVCTESDYEA 1427 Query 1368 FDSSQDHVILAFEMALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNT 1427 +D+SQD LAFE LL+YLGVS DYL LK+ L C+LG+LAIMRFTGEFCTFLFNT Sbjct 1428 YDASQDCYTLAFEYELLRYLGVSNNLIEDYLYLKMHLNCKLGNLAIMRFTGEFCTFLFNT 1487 Query 1428 FANMLFTQLKYKIDPRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFSLTAVEEVRKFP 1487 NMLFT +KY + + H I FAGDDMC ++++ + + L+K FSL A + + P Sbjct 1488 LTNMLFTFMKYDVR-KTHAICFAGDDMC--ANVRLPENQLHSNLLKKFSLKAKVDFTRSP 1544 Query 1488 MFCGWYLSPYGIIKSPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKEE 1547 FCGW LS YGI+K P+L+ AR+ + ++ + +D+Y E ++AY G+ L+ IL E+ Sbjct 1545 TFCGWNLSKYGIVKKPELIAARLAVAKQKGEVNLVLDSYFLEHLYAYNKGDHLFEILSEK 1604 Query 1548 DFEYHYLVIRFFVRNSKLLTGLSKSLIFEIGEGIG 1582 + E+HY + RFFVRN +LL G SK E E G Sbjct 1605 ELEHHYNLTRFFVRNGRLLKGESKRKFMETKEVEG 1639 >polyprotein [Cherry virus A] Sequence ID: ARQ83888.1 Length: 2344 Range 1: 1 to 1639 Score:550 bits(1418), Expect:5e-158, Method:Compositional matrix adjust., Identities:494/1716(29%), Positives:799/1716(46%), Gaps:211/1716(12%) Query 1 MAFTYRNPLEIAINKLPSKQSDQLLSLTTDEIEKTLEVTNRFFSFSITPEDQELLTKHGL 60 MAF + E N LPS +D L + E +R F+F++ P + L G+ Sbjct 1 MAFVAKFAEENYFNSLPSNVTDAFLRDGFNAEHNRFETLSRHFAFALKPSQRNYLNDCGI 60 Query 61 TLAPIGFKSHSHPISKMIENHLLYICVPSLLSSFKSVAFFSLRENKVDSFLKMHSVFSHG 120 LAPI K+H HP+SK IENHLLY V +++S FK + F S++E K + ++ + Sbjct 61 QLAPIASKTHPHPVSKTIENHLLYCVVSNMISDFKFLVFLSIKETKAEYIWNKNTPDTVR 120 Query 121 KIKSLGMYNAIIDGKDKYRYGDVE-----FSSFRDRVIGLRDQCLTRNKFPKVLFLHDEL 175 +I N I+D KD +RY ++F L + +R P F+HDE+ Sbjct 121 EIS-----NRILDIKDAFRYSQTNTVNGGLNNFSFFCANLARRFNSRAIKPDCFFIHDEV 175 Query 176 HFLSPFDMA-FLFETIPEIDRVVATTVFPIELLFGDKVSKEPRVYTYKVHGSSFSFYPDG 234 HF SP ++ FLF P+ V+AT V P EL+ G S Y ++ G + ++PD Sbjct 176 HFWSPSELCEFLFTIEPK--NVLATVVIPPELVEGLDYSFNSVAYDFQKVGGNLYYFPDK 233 Query 235 VASECYEQNLANSKWPFTCSGIQWANR----KIRVTKLQSLFAHHVFSFDRGRACNEFNH 290 + Y+Q + W +C+ I + L+S+ A+H+FSF R + Sbjct 234 SKGKPYQQPI--DSWLLSCNKISMVKNGETFSYSIGLLESIGANHLFSFQRNKVVESTRF 291 Query 291 FDKPSCLLAEEMR-LLTKRFDKAVINRSTVSS-----LSTYMACLKTANAASAVAKLRQL 344 F+ CL +MR LL + I + + + +Y+ CLK ++ S++AKLRQL Sbjct 292 FNDFDCL---DMRKLLPVNVENGKIRGYNIRTWVFRKILSYIVCLKKGDSESSLAKLRQL 348 Query 345 EKRDLYPDELNFVYSFGE---HFKNFGMRDDFDV------SVLQWV-------------K 382 PDEL + F + K F R +D + WV Sbjct 349 SDSSPSPDELLLIGDFFDLMTRVKVFNKRSPWDFLSDVRNYIDSWVIQSPFLRRIFPVGS 408 Query 383 DKFCQVMPHFIAASFFEPTEFHLNMRKLL-----NDLATKGIEVPLSVIILDKV--NFIE 435 +++ +IA + E +N + L+ + + T I +S IL+ V NF+ Sbjct 409 RAITELIRDWIANA--ESLRIQVNCKSLVFSSTFDQINTDCIS-SVSNSILNNVANNFLS 465 Query 436 T-----------RFHARMFDIAQAIGVNLDLLGKRFDYEAE----------SEEYFSENG 474 RF + + G+ +D ++ Y E ++S++ Sbjct 466 VIEACRNWTTRKRFDGGGYSMVSRNGLLVDSASQKISYSPEVYTDLFPSIVRPAFYSDSA 525 Query 475 YIFMPSKSNPERNWILNSGSLKIDYSRLVRARRFRLRRDFLDPISKGKSPRKQLFLESTG 534 + P + E W SGS D+ R+ RL + +ST Sbjct 526 F---PMLESFEPKWNYLSGSWVFDF------RQLRL-----------------CYQQSTS 559 Query 535 NIKSNPNAEKNSESGEIKIEGSAENDQPHEVSHTSMETEDGQGFEGSIPVDLINCFEPEE 594 + S + ++ S + + E +E+ P ++ E E G E S+ + E +E Sbjct 560 DDTSMKDDDEFSANNLEEKEEISESPNPSPFLNS--EVEKG---ETSLESKEVADSEQDE 614 Query 595 IKLPKRRRKNDCVFKAISAHLGIDSQDLLNFLVNEDISDELLDCIEEDKGLSHEMIEEVL 654 K RKN C F+A+ +G+ + ++N ++ ++ L + E L H M ++L Sbjct 615 ----KNVRKNACFFEAVGETIGVSANSMINKILCSNLPT--LQPVVEQLMLDHPMSSKLL 668 Query 655 ------------ITKGLSMVYTSDFKEMAVLNRKYGVNGKMYCTIKGN-----HCELSSK 697 I G S++ +D M ++ G G ++C K +L Sbjct 669 EICCEFLGYRVHIYYGNSIIKLNDNANMHAIHIG-GKPGHLFCINKEGIRTPRDGQLKDP 727 Query 698 EC---------FIRLLKEGGEAQMSNENLNADSLFDLGRFVHNRDRAVKLAKSMARGTTG 748 E F + G A ++ ++ L + + V++ + Sbjct 728 EVGPQVFIGSIFSKTYGMGSSAPINLSEIDISKSLTLISAFESMNLGVRVDRKAILEGQL 787 Query 749 LLNEFDLEFCKNMVTLSELFPENFSSV------VGLRLGFAGSGKTHKVL-QWINYTPSV 801 + N+F L F K E F S+ V +GFAGSGK+ ++ Q I+ S Sbjct 788 ISNDF-LAFLKRKGN------EGFKSIKIQPIPVFPFIGFAGSGKSFGLIEQLIDGDCSQ 840 Query 802 KRMFISPRRMLADEVEPQLKGTACQ----------VHTWETALKKIDGTFMEVFVDEIGL 851 +F +PR+ + ++ ++ + T+E L + + V +DE L Sbjct 841 NFIFTAPRKKIIGQIHDKIDSRQYEDKMKISRKKNFSTFENTLLSLINKPL-VVIDECSL 899 Query 852 YPPGYLTLLQMCAFRKIVKGQSENF---------LKGKLLELSKTCLNIRCFGDPLQLRY 902 PPG++ LL + + I++ +++F +G + ++ + GD LQ + Sbjct 900 NPPGFIDLLLLKSLDSIIRKSNKDFDFFFSSSVLSEGIIANIASPVACLAATGDVLQSSF 959 Query 903 YSAEDTNLLDKTHDIDLM--IKTIKHKYLFQGYRFGQWFQELVNMP--TRVDESKFSRKF 958 YS L+ +D+ + + ++ YLF RFG +F + + +++ F+ Sbjct 960 YSESCGKLMQCKNDLKTICSLSHLRLPYLFGSKRFG-YFSGFLKLGYYNQLESKAFTIDN 1018 Query 959 FADI-SSVKT--EDYGLILVAKREDKGVFAGRVP-VATVSESQGMTISKRVLICLDQNLF 1014 + +V T + +G +LV R DK F P V T++ESQG T + +LI + ++ F Sbjct 1019 MGTLLKAVGTSMDKFG-VLVTSRADKSDFELDFPNVCTINESQGSTFNSVILI-VTRDFF 1076 Query 1015 AGGANAAIVAITRSKVGFDFILKGNSLKEVQRMAQK--TIWQFIIEGKSIPMERIVN-MN 1071 + IVAITR + E+ + ++ +++ SI + I + +N Sbjct 1077 SNPIETIIVAITRHQKNLLIYFPAAIKNEMDFLERRFPIHSNVVLKNFSILDDLIKDKLN 1136 Query 1072 PGASFYESPLDVGNSSIQDKASNDLFIMPFINLAEEEVDPEEVVGDVIQPVEWFKCHVPV 1131 P E P + K D F+ ++L E P+ + ++++ E K H+P+ Sbjct 1137 PFQLVQEDPF---GHDFEIKLEGDPFLKSELSLVNEIKLPQ-IEENLVEVKENLKTHLPI 1192 Query 1132 FDTDPTLAEIFDKVAAKEKREFQSV-LGLSNQFLDMEKNGCKID----ILPFARQNVFPH 1186 + EI ++ A+E+REF+ +G S QF D + +++ +LP A VFP Sbjct 1193 SYSGLWNLEI-SEMRAREEREFKKYGVGWSKQFKDEPNSRDQVEDNCAMLPEA---VFPR 1248 Query 1187 HQASDDVTFWAGVQKRIRKSNWRREKSKFEEFESQGKELLQEFISMLPFEFKVNIKEIED 1246 H A+DD+TFW+ V+KR+ N FE+ + GKELL F+ +P + K +D Sbjct 1249 HFANDDLTFWSAVKKRLIFKNPLSNAHDFEKAKPFGKELLDIFLKKVPLIPSFDQKMYDD 1308 Query 1247 GEKSFLEKRKLKSEKMWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLAC 1306 F EK+ K+ M H +RS DW ++ FLF+KSQ CTK+ KMF +AKAGQTLAC Sbjct 1309 SITEFEEKKISKNAAMIGAHHDRSTTDWPINEIFLFIKSQLCTKKEKMFCDAKAGQTLAC 1368 Query 1307 FQHIVLFRFGPMLRAIESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVFDGFSIESDYT 1366 F H++L +F P+ R IE +S ++YIH KNF L+ +V + F G ESDY Sbjct 1369 FSHLILCKFAPLNRYIEKKVTQSLPGNFYIHQKKNFDELEKWVKSHD--FSGVCTESDYE 1426 Query 1367 AFDSSQDHVILAFEMALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFN 1426 A+D+SQD LAFE LL+YLGVS DYL LK+ L C+LG+LAIMRFTGEFCTFLFN Sbjct 1427 AYDASQDCYTLAFEYELLRYLGVSNNLIEDYLYLKMHLNCKLGNLAIMRFTGEFCTFLFN 1486 Query 1427 TFANMLFTQLKYKIDPRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFSLTAVEEVRKF 1486 T NMLFT +KY + + H I FAGDDMC ++++ + + L+K FSL A + + Sbjct 1487 TLTNMLFTFMKYDVR-KTHAICFAGDDMC--ANVRLPENQLHSNLLKKFSLKAKVDFTRS 1543 Query 1487 PMFCGWYLSPYGIIKSPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKE 1546 P FCGW LS YGI+K P+L+ AR+ + ++ + +D+Y E ++AY G+ L+ IL E Sbjct 1544 PTFCGWNLSKYGIVKKPELIAARLAVAKQKGEVNLVLDSYFLEHLYAYNKGDHLFEILSE 1603 Query 1547 EDFEYHYLVIRFFVRNSKLLTGLSKSLIFEIGEGIG 1582 ++ E+HY + RFFVRN +LL G SK E E G Sbjct 1604 KELEHHYNLTRFFVRNGRLLKGESKRKFMETKEVEG 1639 >polyprotein, partial [Apple stem grooving virus] Sequence ID: AFM37535.1 Length: 284 Range 1: 1 to 284 Score:494 bits(1272), Expect:3e-157, Method:Compositional matrix adjust., Identities:247/284(87%), Positives:258/284(90%), Gaps:0/284(0%) Query 1585 WLSSTSTASSRRSNLQTSKLMLSRPQSFTRMQPFSNQTCLIASKGLNQTSRFPLDLVTAS 1644 WLSSTST SSR+SNL+TSKLM SRPQSFTRMQPFS+QTC IA KGL+QTSRFPLDLVTA Sbjct 1 WLSSTSTTSSRKSNLRTSKLMPSRPQSFTRMQPFSSQTCSIALKGLSQTSRFPLDLVTAL 60 Query 1645 SCLISNCLMTPKLIQSGRKATSTNTYTMESSWLGSKQCCQTLEAWKGESLYMMEPAWIRK 1704 SCLISNC MTPK IQSGRKA STNT ESSWLGSK+CCQTLEAWKGESLYMMEPAWI+K Sbjct 61 SCLISNCSMTPKSIQSGRKAASTNTCITESSWLGSKRCCQTLEAWKGESLYMMEPAWIQK 120 Query 1705 EATFARIFSSLSLTVATLVSGQSTVCLPQTQIWPKGLDFVWTLIVHNMNRTLSCLLLTLE 1764 AT ARIFSSLSLT ATLVSGQSTVCLPQTQIW KGLDFVWTLI+HNMNRT S LL LE Sbjct 121 GATSARIFSSLSLTAATLVSGQSTVCLPQTQIWRKGLDFVWTLIIHNMNRTPSYSLLILE 180 Query 1765 LHTDASTLQGFWKPKLAIQDGLHRQSAAVKHLNSMRKSRWPSWIADPRCFWKKVHQTCTL 1824 LHTDASTLQGFWKPKL IQ GLHRQSAAVKH NSM+KSRWPSWI +PRCFW+KVHQTCTL Sbjct 181 LHTDASTLQGFWKPKLVIQGGLHRQSAAVKHSNSMKKSRWPSWITNPRCFWRKVHQTCTL 240 Query 1825 KRDCSEVTRLEGHAQFPLKGGQTQGCKKREDLGPSRLELKDLEK 1868 KRD SEVTRLE HAQFPLKGGQTQGCKKREDLGPS+LE KDLEK Sbjct 241 KRDYSEVTRLEDHAQFPLKGGQTQGCKKREDLGPSQLESKDLEK 284 >polyprotein [Cherry virus A] Sequence ID: ARQ83946.1 Length: 2342 Range 1: 1 to 1636 Score:543 bits(1399), Expect:1e-155, Method:Compositional matrix adjust., Identities:488/1711(29%), Positives:788/1711(46%), Gaps:207/1711(12%) Query 1 MAFTYRNPLEIAINKLPSKQSDQLLSLTTDEIEKTLEVTNRFFSFSITPEDQELLTKHGL 60 MAF + E N LPS +D L + E ++ F+F++ P + L G+ Sbjct 1 MAFVAKFAEENYFNSLPSNVTDAFLRDGFNAEHNRFETLSKHFAFALKPSQRNYLNDCGI 60 Query 61 TLAPIGFKSHSHPISKMIENHLLYICVPSLLSSFKSVAFFSLRENKVDSFLKMHSVFSHG 120 LAPI K+H HP+SK IENHLLY V +++S+FK + F S++E K + ++ + Sbjct 61 QLAPIASKTHPHPVSKTIENHLLYCVVSNMVSNFKFLVFLSIKETKAEYIWNKNTPDTVR 120 Query 121 KIKSLGMYNAIIDGKDKYRYGDVE-----FSSFRDRVIGLRDQCLTRNKFPKVLFLHDEL 175 +I N I+D KD +RY ++F L + +R P F+HDE+ Sbjct 121 EIS-----NRILDIKDAFRYNPTNTVNGGLNNFSFFCANLARRFNSRAIKPDCFFIHDEV 175 Query 176 HFLSPFDMA-FLFETIPEIDRVVATTVFPIELLFGDKVSKEPRVYTYKVHGSSFSFYPDG 234 HF SP ++ FLF P+ V+AT V P EL+ G S Y ++ ++ ++PD Sbjct 176 HFWSPSELCEFLFTIEPK--NVLATVVIPPELIEGLDYSFNSVAYDFQKVENNLYYFPDK 233 Query 235 VASECYEQNLANSKWPFTCSGIQWANR----KIRVTKLQSLFAHHVFSFDRGRACNEFNH 290 + Y+Q W C+ I + ++S+ A+H+FSF R + Sbjct 234 SKGKPYQQ--PTDPWLLRCNKISMIKNGETFSYSIGLIESVGANHLFSFQRNKVVESTRF 291 Query 291 FDKPSCLLAEEMR-LLTKRFDKAVINRSTVSS-----LSTYMACLKTANAASAVAKLRQL 344 F+ CL +MR LL + +I + + + +Y+ CLK ++ S++AKLRQL Sbjct 292 FNDFDCL---DMRKLLPVNVENGMIRGYNIRTWVFRKILSYIVCLKKGDSESSLAKLRQL 348 Query 345 EKRDLYPDELNFVYSFGE---HFKNFGMRD--DFDVSVLQWVKDKFCQ------------ 387 PDEL + F + K F R DF V +V Q Sbjct 349 SDSSPSPDELLLIGDFFDLMTRVKVFNKRSPWDFLSDVRNYVDSWIIQSPFLRRIFPVGS 408 Query 388 -----VMPHFIAASFFEPTEFHLNMRKL----------------LNDLATKGIEVPLSVI 426 ++ +IA + E + + + L + + I LS + Sbjct 409 RAITELIRDWIANA--ESLKIQITCQSLTFSDSFDQMDSGSISSIGNFVFNNIADNLSSV 466 Query 427 ILDKVNFIET-RFHARMFDIAQAIGVNLDLLGKRFDYEAE----------SEEYFSENGY 475 + N+I RF + + G+ +D + ++ Y E ++S++ + Sbjct 467 VKACKNWITCERFTGGSYSMVNRNGLLVDSMSQKISYSPEVYIDIFPSVVRTAFYSDSAF 526 Query 476 IFMPSKSNPERNWILNSGSLKIDYSRLVRARRFRLRRDFLDPISKGKSPRKQLFLESTGN 535 + S E W SGS D+ R +R ++ D D I K + G Sbjct 527 SRLESF---EPRWDYLSGSWIFDH-RQLRLCHQQITSD--DAIEKNDDELFNKDFQEDGE 580 Query 536 IKSNPNAEKNSESGEIKIEGSAENDQPHEVSHTSMETEDGQGFEGSIPVDLINCFEPEEI 595 I + N+ S S +K E S E+ + + +DG+ Sbjct 581 INVSLNSSPFSNSEMVKGENSQESKE------LEILEQDGE------------------- 615 Query 596 KLPKRRRKNDCVFKAISAHLGIDSQDLLNFLVNEDISDELLDCIEE---DKGLSHEMIE- 651 RKN C F+A+ +G+ + ++N ++ ++ + L IE+ D +S +++ Sbjct 616 ----IARKNACFFEAVGETIGVPANSMINKILCSELPN-LQPVIEQLMLDHPISSKLLNV 670 Query 652 -------EVLITKGLSMVYTSDFKEMAVLNRKYGVNGKMYCTIK-----GNHCELSSKEC 699 V I G S++ +D M ++ G G ++C K +L E Sbjct 671 CCEFLGYRVHIYYGNSIIKLNDNANMHAIHIG-GKPGHLFCINKEGIKIPKDSQLKDPEV 729 Query 700 ---------FIRLLKEGGEAQMSNENLNADSLFDLGRFVHNRDRAVKLAKSMARGTTGLL 750 F + G A ++ ++ L + + V++ + + Sbjct 730 GPQAFIGSIFSKTYGMGSSAPVNLSEIDISKSLTLISAFESMNLGVRVDRKAILEGQLIS 789 Query 751 NEFDLEFCKNMVTLSELFPENFSSV------VGLRLGFAGSGKTHKVL-QWINYTPSVKR 803 ++F L F K E F S+ V +GFAGSGK+ ++ Q IN + Sbjct 790 SDF-LTFLKRKRN------EGFKSIKIQSIPVFPFIGFAGSGKSFGLIEQLINGDCNQNF 842 Query 804 MFISPRRMLADEV---------EPQLKGTACQ-VHTWETALKKIDGTFMEVFVDEIGLYP 853 +F +PR+ + ++ E +LK + + T+E L + + V +DE L P Sbjct 843 IFTAPRKKIIGQIHDKIDSRQYEDKLKISGKKNFSTFENTLLSLINKPL-VVIDECSLNP 901 Query 854 PGYLTLLQMCAFRKIVKGQSENF---------LKGKLLELSKTCLNIRCFGDPLQLRYYS 904 PG++ LL + + I++ +++F +G + ++ I GD LQ +YS Sbjct 902 PGFIDLLLLKSLDSIIRKSNKDFDFFFSSSVLSEGIIANVASPIACIAATGDILQSSFYS 961 Query 905 AEDTNLLDKTHDIDLM--IKTIKHKYLFQGYRFGQ--------WFQELVNMPTRVDESKF 954 L+ +D+ + + ++ YLF RFG ++ +L + +D + Sbjct 962 ESCGKLMQCKNDLKTICSLSHLRLPYLFGSKRFGYFTGFLKLGYYNQLESKAFTIDNMET 1021 Query 955 SRKFFADISSVKTEDYGLILVAKREDKGVFAGRVP-VATVSESQGMTISKRVLICLDQNL 1013 K + +G +LV R DK F P V T++ESQG T + +LI + ++ Sbjct 1022 LLKAVG----TSMDKFG-VLVTSRADKSDFELDFPNVCTINESQGCTFNSVILI-VTRDF 1075 Query 1014 FAGGANAAIVAITRSKVGFDFILKGNSLKEVQRMAQKTIWQFIIEGKSIPMERIVNMNPG 1073 F+ A IVAITR + E+ + ++ + K+ + + + Sbjct 1076 FSNPIEAIIVAITRHQKNLLIYFPAAIQGEMDFLGRRFPIHLNVVLKNFSVLDDLIKDKL 1135 Query 1074 ASFYESPLDVGNSSIQDKASNDLFIMPFINLAEEEVDPEEVVGDVIQPVEWFKCHVPVFD 1133 SF D + K D F+ ++L E P+ + ++I+ E K H+P+ Sbjct 1136 NSFQLIQEDPFGHDFEIKLEGDPFLKSELSLVNEIKTPQ-IEENLIEMKENLKTHLPISY 1194 Query 1134 TDPTLAEIFDKVAAKEKREFQSV-LGLSNQFLDMEKNGCKID----ILPFARQNVFPHHQ 1188 EI ++ A+E+REF+ +G S QF D N +++ +LP A VFP H Sbjct 1195 CGLWNLEI-SEMRAREEREFKKYGVGWSKQFKDEPNNRDQVEDNCAMLPEA---VFPRHF 1250 Query 1189 ASDDVTFWAGVQKRIRKSNWRREKSKFEEFESQGKELLQEFISMLPFEFKVNIKEIEDGE 1248 A+DD+TFW+ V+KR+ N FE+ + GKELL F+ +P + K +D Sbjct 1251 ANDDLTFWSAVKKRLVFKNPLSNAHDFEKAKPFGKELLDIFLKKIPLIPSFDQKMYDDSI 1310 Query 1249 KSFLEKRKLKSEKMWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACFQ 1308 F EK+ K+ M H +RS DW ++ FLF+KSQ CTK+ KMF +AKAGQTLACF Sbjct 1311 SEFEEKKISKNAAMIGAHHDRSTTDWPINEIFLFIKSQLCTKKEKMFCDAKAGQTLACFS 1370 Query 1309 HIVLFRFGPMLRAIESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVFDGFSIESDYTAF 1368 H++L +F P+ R IE +S ++YIH KNF L+ +V + F G ESDY A+ Sbjct 1371 HLILCKFAPLNRYIEKKVTQSLPGNFYIHQKKNFDELEKWV--KSYDFSGVCTESDYEAY 1428 Query 1369 DSSQDHVILAFEMALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNTF 1428 D+SQD LAFE LL+YLGVS DYL LK+ L C+LG+LAIMRFTGEFCTFLFNT Sbjct 1429 DASQDSYTLAFEYELLRYLGVSNSLIEDYLYLKMHLNCKLGNLAIMRFTGEFCTFLFNTL 1488 Query 1429 ANMLFTQLKYKIDPRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFSLTAVEEVRKFPM 1488 NMLFT +KY + + H I FAGDDMC ++++ ++ + L+K FSL A + + P Sbjct 1489 TNMLFTFMKYDVR-KTHAICFAGDDMC--ANVRLPENQQHSSLLKKFSLKAKVDFTRSPT 1545 Query 1489 FCGWYLSPYGIIKSPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKEED 1548 FCGW LS YGI+K P+L+ AR+ + ++ + +D+Y E ++AY G+ L+ IL E++ Sbjct 1546 FCGWNLSRYGIVKKPELIAARLAVAKQKGEVNLVLDSYFLEHLYAYNKGDHLFEILSEKE 1605 Query 1549 FEYHYLVIRFFVRNSKLLTGLSKSLIFEIGE 1579 E+HY + RFFV+N K L G SK E E Sbjct 1606 LEHHYNLTRFFVKNGKHLKGESKKKFMETKE 1636 >polyprotein [Cherry virus A] Sequence ID: BCA25827.1 Length: 2342 Range 1: 1 to 1632 Score:538 bits(1386), Expect:7e-154, Method:Compositional matrix adjust., Identities:487/1713(28%), Positives:789/1713(46%), Gaps:218/1713(12%) Query 1 MAFTYRNPLEIAINKLPSKQSDQLLSLTTDEIEKTLEVTNRFFSFSITPEDQELLTKHGL 60 MAF + E N LPS +D L + E ++ F+F++ P + L G+ Sbjct 1 MAFVAKFAEENYFNSLPSNVTDAFLRDGFNAEHNRFETLSKHFAFALKPSQRNYLNDCGI 60 Query 61 TLAPIGFKSHSHPISKMIENHLLYICVPSLLSSFKSVAFFSLRENKVDSFLKMHSVFSHG 120 LAPI K+H HP+SK+IENHLLY V +++S+FK + F S++E+K + ++ + Sbjct 61 QLAPIASKTHPHPVSKIIENHLLYCVVSNMVSNFKFLVFLSIKESKAEYIWNKNTPDTVR 120 Query 121 KIKSLGMYNAIIDGKDKYRYGDVE-----FSSFRDRVIGLRDQCLTRNKFPKVLFLHDEL 175 +I N I+D KD +RY V ++F L + +R P F+HDE+ Sbjct 121 EIS-----NRILDIKDAFRYSPVNTVNGGLNNFSFFCANLARRFNSRAIKPDCFFIHDEV 175 Query 176 HFLSPFDMA-FLFETIPEIDRVVATTVFPIELLFGDKVSKEPRVYTY-KVHGSSFSFYPD 233 HF +P ++ FLF P+ V+AT V P EL+ G S Y + KV G+ + ++PD Sbjct 176 HFWTPSNLCEFLFTIEPK--NVLATVVIPPELIEGLNYSFNSVAYDFMKVDGNLY-YFPD 232 Query 234 GVASECYEQNLANSKWPFTCSGIQWANR----KIRVTKLQSLFAHHVFSFDRGRACNEFN 289 + Y+Q + W +C+ I + L+S+ A+H+FSF R + Sbjct 233 KSKGKPYQQ--PSDPWLLSCNKISMIKNGETFSYSIGLLESIGANHLFSFQRNKVVESIR 290 Query 290 HFDKPSCLLAEEMR-LLTKRFDKAVINRSTVSS-----LSTYMACLKTANAASAVAKLRQ 343 F+ CL +MR LL + +I + + + +Y+ CLK ++ S++AKLRQ Sbjct 291 FFNDFDCL---DMRNLLPINVENKMIKGYNIRTWVFKKILSYIVCLKKGDSESSLAKLRQ 347 Query 344 LEKRDLYPDELNFV------------------YSFGEHFKNFG---------MRDDFDVS 376 L DEL + +SF KN+ +R F V Sbjct 348 LSDSSPSSDELLLIGDFFDLMTRVKIFNKRSPWSFLSDAKNYVDSWVIQSPFLRRIFPVG 407 Query 377 -------VLQWVKD----KFCQVMPHFIAASFFEPTEFHLNMRKLLNDLATKGIEVPLSV 425 + W+ + K + + FEP + +N + D + + S Sbjct 408 SKAITELIRDWIANAESLKIQTTCSSLVFSDSFEPIK--INDFSSVYDGILESVSDSFSK 465 Query 426 IILDKVNF-IETRFHARMFDIAQAIGVNLDLLGKRFDYEAESEEYFSENGYIFMPSKSNP 484 I N+ I RF + + GV +D ++ Y S E F + PS P Sbjct 466 TIKACRNWLICPRFDGGSYSMVSRHGVLVDSTRQKISY---SSEVFVD----LFPSSVRP 518 Query 485 --------------ERNWILNSGSLKIDYSRLVRARRFRLRRDFLDPISKGKSPRKQLFL 530 E W GS D R+ RL DF Sbjct 519 AFYSDPAFSQLESFEPKWNYLHGSWDYD------QRQLRLCYDF---------------- 556 Query 531 ESTGNIKSNPNAEKNSESGEIKIEGSAENDQPHEVSHTSMETEDGQGFEGSIPVDLINCF 590 N S+ + E E+ + + + D P E++ + ++E G+ Sbjct 557 ----NSSSDSSKEVVVEATKTPLLEPKDGDAPSELNFLASKSEKGETSR----------- 601 Query 591 EPEEIKLPKRR----RKNDCVFKAISAHLGIDSQDLLNFLVNEDISDELLDCIEE---DK 643 E E K++ RKN C F A+ +G+ ++ ++N ++ D+ L IE+ D Sbjct 602 ETESTGESKQKKQITRKNACFFNAVGETIGVSAESMINKILCSDLP-ALKPVIEQLVLDN 660 Query 644 GLSHEMIE--------EVLITKGLSMVYTSDFKEMAVLNRKYGVNGKMYCTIKGN----- 690 ++ +++E V I G S++ +D M ++ G G ++C K + Sbjct 661 PINSKLLEVCCVFLGYRVHIYYGDSIIKLNDDPNMHAIHIG-GKPGHLFCIQKEDAEIPH 719 Query 691 HCELSSKE---------CFIRLLKEGGEAQMSNENLNADSLFDLGRFVHNRDRAVKLAKS 741 L + E F + G A + ++ L + + V++ + Sbjct 720 DSRLKTPEMGPQSFIGSIFSKTYGMGSSAPIHLSKIDITKALTLIAAFESMNLGVRVDRK 779 Query 742 MARGTTGLLNEFDLEFCKNMVTLSELFPENFSSVVGLRLGFAGSGKTHKVLQ-WINYTPS 800 + N F L F K S V +GFAGSGK+ +++ I+ S Sbjct 780 AILEGNLISNSF-LAFLKRKSNEGHKDISIQSLPVYPFIGFAGSGKSFGLIEKLIDGDCS 838 Query 801 VKRMFISPRRMLADEVEPQLKGTACQVHTWETALKKIDGTFME----------VFVDEIG 850 +F +PR+ + ++ ++ + +T+ K+ TF + +DE Sbjct 839 QNFIFTAPRKKIIGQIHDKIDSRQYE-DKLKTSRKRNFSTFENTLLSLINKPLIVMDECS 897 Query 851 LYPPGYLTLLQMCAFRKIVKGQSENF---------LKGKLLELSKTCLNIRCFGDPLQLR 901 L PPG++ L+ + + I++ +++F +G + ++ I GD LQ Sbjct 898 LNPPGFIDLVLLKSLDSIIRKSNKDFDYFFSSSSVSEGIIANVASPIACIAVTGDTLQSS 957 Query 902 YYSAEDTNLLDKTHDIDLM--IKTIKHKYLFQGYRFGQWFQELVNMP--TRVDESKFSRK 957 +YS L+ +D+ + + ++ YLF RFG +F + + +++ F+ Sbjct 958 FYSESCGKLMQHRNDLKTLCALSHLRLPYLFGSKRFG-YFTGFLKLGYYNQMESKAFTID 1016 Query 958 FFADI-SSVKT--EDYGLILVAKREDKGVFAGRVP-VATVSESQGMTISKRVLICLDQNL 1013 + +V T + +G +LV R DK F P V T++ESQG T + +LI + ++ Sbjct 1017 NMGTLLKAVDTSMDKFG-VLVTSRADKSDFELDFPNVCTINESQGSTFNSVILI-VTRDF 1074 Query 1014 FAGGANAAIVAITRSKVGFDFILKGNSLKEVQRMAQK--TIWQFIIEGKSIPMERIVN-M 1070 F+ + IVAITR + E+ ++++ +++ S+ + I + + Sbjct 1075 FSNPIESIIVAITRHQKNLLIYFPAAIQGEMDFLSRRFPVHSNVVLKNFSVLDDLIKDKL 1134 Query 1071 NPGASFYESPLDVGNSSIQDKASNDLFIMPFINLAEEEVDP--EEVVGDVIQPVEWFKCH 1128 NP E P + K D F+ ++L + P EEV I+ E K H Sbjct 1135 NPFQLIQEDPF---GHDFEIKLEGDPFLKSELSLVNDIKLPQIEEVS---IEMRENLKTH 1188 Query 1129 VPVFDTDPTLAEIFDKVAAKEKREFQSV-LGLSNQFLDMEKNGCKID----ILPFARQNV 1183 +P+ EI ++ A+E REF+ G S QF D +I+ +LP A V Sbjct 1189 LPISYCGLWNLEI-SEMRARENREFKKFGSGWSKQFKDEPNQRDQIEDNCAMLPEA---V 1244 Query 1184 FPHHQASDDVTFWAGVQKRIRKSNWRREKSKFEEFESQGKELLQEFISMLPFEFKVNIKE 1243 FP H A+DD+TFW+ V+KR+ N FE+ + GKE+L F+ +P + + Sbjct 1245 FPRHFANDDLTFWSAVKKRLVFKNPLNNVHDFEKAKPFGKEMLDIFLKKVPLIPSFDQRM 1304 Query 1244 IEDGEKSFLEKRKLKSEKMWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQT 1303 E+ F EK+ K+ M H +RS DW ++ FLF+KSQ CTK+ KMF +AKAGQT Sbjct 1305 YEESISEFEEKKISKNAAMIGAHHDRSTTDWPINEIFLFIKSQLCTKKEKMFCDAKAGQT 1364 Query 1304 LACFQHIVLFRFGPMLRAIESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVFDGFSIES 1363 LACF H++L +F P+ R IE + ++YIH KNF L+ +V + F G ES Sbjct 1365 LACFSHLILCKFAPLNRYIEKKVTQCLPGNFYIHQKKNFDELEKWV--KSYDFSGVCTES 1422 Query 1364 DYTAFDSSQDHVILAFEMALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTF 1423 DY A+D+SQD LAFE L++YLG+S DYL LK+ L C+LG+LAIMRFTGEFCTF Sbjct 1423 DYEAYDASQDSYTLAFEYELMKYLGISNSMIEDYLYLKMHLNCKLGNLAIMRFTGEFCTF 1482 Query 1424 LFNTFANMLFTQLKYKIDPRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFSLTAVEEV 1483 LFNT NMLFT +KY + + H I FAGDDMC ++++ + + L+K FSL A + Sbjct 1483 LFNTLTNMLFTFMKYDVR-KTHAICFAGDDMC--ANVRLPENLQHSNLLKKFSLKAKVDF 1539 Query 1484 RKFPMFCGWYLSPYGIIKSPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTI 1543 + P FCGW LS YGI+K P+L+ AR+ + ++ + +D+Y E ++AY G+ L+ I Sbjct 1540 TRSPTFCGWNLSRYGIVKKPELIAARLAVAKQKGEVNLVLDSYFLEHLYAYNKGDHLFEI 1599 Query 1544 LKEEDFEYHYLVIRFFVRNSKLLTGLSKSLIFE 1576 L E++ E+HY + RFFV++ KLL G SK E Sbjct 1600 LSEKELEHHYNLTRFFVKHEKLLKGESKKKFME 1632 >replicase-associated protein, partial [Apple stem grooving virus] Sequence ID: UVV38559.1 Length: 232 Range 1: 1 to 232 Score:477 bits(1227), Expect:9e-152, Method:Compositional matrix adjust., Identities:225/232(97%), Positives:230/232(99%), Gaps:0/232(0%) Query 1262 MWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACFQHIVLFRFGPMLRA 1321 MWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACFQHIVLFRFGPMLRA Sbjct 1 MWANHSERSDIDWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACFQHIVLFRFGPMLRA 60 Query 1322 IESAFLRSCGDSYYIHSGKNFFCLDSFVTKNASVFDGFSIESDYTAFDSSQDHVILAFEM 1381 IE AFLRSCG+SYYIHSGKNFFCLDSFVTKNA VFDGFSIESDYTAFDSSQDHVILAFEM Sbjct 61 IERAFLRSCGESYYIHSGKNFFCLDSFVTKNAEVFDGFSIESDYTAFDSSQDHVILAFEM 120 Query 1382 ALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNTFANMLFTQLKYKID 1441 ALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNTFANMLFTQLKYKID Sbjct 121 ALLQYLGVSKEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNTFANMLFTQLKYKID 180 Query 1442 PRRHRILFAGDDMCSLSSLKRRRGERATRLMKSFSLTAVEEVRKFPMFCGWY 1493 PR+HRILFAGDDMCSLSSLKRR+GE+ATRL+KSFSLTAVEEVRKFPMFCGWY Sbjct 181 PRKHRILFAGDDMCSLSSLKRRKGEKATRLLKSFSLTAVEEVRKFPMFCGWY 232