hmmsearch - search a sequence database with a profile HMM HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: 1.pr [podsem] Sequence database: align1.mfa per-sequence score cutoff: [none] per-domain score cutoff: [none] per-sequence Eval cutoff: <= 10 per-domain Eval cutoff: [none] - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query HMM: podsem Accession: [none] Description: [none] [HMM has been calibrated; E-values are empirical estimates] Scores for complete sequences (score includes all domains): Sequence Description Score E-value N -------- ----------- ----- ------- --- A8ELQ9_BURPE/549-582 52.4 1.5e-13 1 Q63L92_BURPS/549-582 52.4 1.5e-13 1 C6U364_BURPE/563-596 51.7 2.3e-13 1 C5ZL95_BURPE/549-582 51.7 2.3e-13 1 B1H6U8_BURPE/660-693 51.7 2.3e-13 1 A3P5B6_BURP0/549-582 51.7 2.3e-13 1 A2RWZ1_BURM9/553-586 51.7 2.3e-13 1 C0YAX4_BURPE/549-582 51.7 2.3e-13 1 A5TGG2_BURML/691-724 51.7 2.3e-13 1 A9JYS3_BURML/691-724 51.7 2.3e-13 1 A4MHC0_BURPE/549-582 51.7 2.3e-13 1 A5J2S5_BURML/691-724 51.7 2.3e-13 1 B7CEQ6_BURPE/563-596 51.7 2.3e-13 1 Q3JMG9_BURP1/665-698 51.7 2.3e-13 1 A8KSB2_BURPE/665-698 51.7 2.3e-13 1 C4I3A0_BURPE/587-620 51.7 2.3e-13 1 A3MDP8_BURM7/553-586 51.7 2.3e-13 1 A3NJQ2_BURP6/549-582 51.7 2.3e-13 1 A1UUJ2_BURMS/131-164 51.7 2.3e-13 1 Q62C70_BURMA/553-586 51.7 2.3e-13 1 A3RNT0_RALSL/435-482 3.1 0.43 1 B5SDI9_RALSL/450-497 3.1 0.43 1 F6GA27_RALS8/450-497 -0.6 1.6 1 B5S5R3_RALSL/435-482 -0.6 1.6 1 D8P5B0_RALSL/435-482 -0.6 1.6 1 D8NE79_RALSL/435-482 -1.2 1.9 1 G3AB95_9RALS/435-482 -1.2 1.9 1 Q8XQN5_RALSO/435-482 -1.4 2.1 1 D4X6V5_9BURK/438-485 -3.6 4.3 1 B3RBY2_CUPTR/437-494 -3.9 4.9 1 E2SSV5_9RALS/435-482 -4.5 5.9 1 C6BN90_RALP1/435-482 -4.5 5.9 1 G3YUE9_9RALS/435-482 -4.5 5.9 1 B2UI91_RALPJ/435-482 -4.5 5.9 1 D8N1N7_RALSL/435-482 -5.6 8.8 1 G2ZS20_9RALS/450-497 -5.6 8.8 1 Parsed for domains: Sequence Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- A8ELQ9_BURPE/549-582 1/1 35 85 .. 1 35 [] 52.4 1.5e-13 Q63L92_BURPS/549-582 1/1 35 85 .. 1 35 [] 52.4 1.5e-13 C6U364_BURPE/563-596 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 C5ZL95_BURPE/549-582 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 B1H6U8_BURPE/660-693 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A3P5B6_BURP0/549-582 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A2RWZ1_BURM9/553-586 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 C0YAX4_BURPE/549-582 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A5TGG2_BURML/691-724 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A9JYS3_BURML/691-724 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A4MHC0_BURPE/549-582 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A5J2S5_BURML/691-724 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 B7CEQ6_BURPE/563-596 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 Q3JMG9_BURP1/665-698 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A8KSB2_BURPE/665-698 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 C4I3A0_BURPE/587-620 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A3MDP8_BURM7/553-586 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A3NJQ2_BURP6/549-582 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A1UUJ2_BURMS/131-164 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 Q62C70_BURMA/553-586 1/1 35 85 .. 1 35 [] 51.7 2.3e-13 A3RNT0_RALSL/435-482 1/1 35 85 .. 1 35 [] 3.1 0.43 B5SDI9_RALSL/450-497 1/1 35 85 .. 1 35 [] 3.1 0.43 F6GA27_RALS8/450-497 1/1 35 85 .. 1 35 [] -0.6 1.6 B5S5R3_RALSL/435-482 1/1 35 85 .. 1 35 [] -0.6 1.6 D8P5B0_RALSL/435-482 1/1 35 85 .. 1 35 [] -0.6 1.6 D8NE79_RALSL/435-482 1/1 35 85 .. 1 35 [] -1.2 1.9 G3AB95_9RALS/435-482 1/1 35 85 .. 1 35 [] -1.2 1.9 Q8XQN5_RALSO/435-482 1/1 35 85 .. 1 35 [] -1.4 2.1 D4X6V5_9BURK/438-485 1/1 35 85 .. 1 35 [] -3.6 4.3 B3RBY2_CUPTR/437-494 1/1 35 67 .. 1 35 [] -3.9 4.9 E2SSV5_9RALS/435-482 1/1 35 85 .. 1 35 [] -4.5 5.9 C6BN90_RALP1/435-482 1/1 35 85 .. 1 35 [] -4.5 5.9 G3YUE9_9RALS/435-482 1/1 35 85 .. 1 35 [] -4.5 5.9 B2UI91_RALPJ/435-482 1/1 35 85 .. 1 35 [] -4.5 5.9 D8N1N7_RALSL/435-482 1/1 35 85 .. 1 35 [] -5.6 8.8 G2ZS20_9RALS/450-497 1/1 35 85 .. 1 35 [] -5.6 8.8 Alignments of top-scoring domains: A8ELQ9_BURPE/549-582: domain 1 of 1, from 35 to 85: score 52.4, E = 1.5e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA FvEGFG DtRRsGRFL A8ELQ9_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFVEGFGxxDTRRSGRFL 81 RAAa<-* RA a A8ELQ9_BUR 82 RAXA 85 Q63L92_BURPS/549-582: domain 1 of 1, from 35 to 85: score 52.4, E = 1.5e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA FvEGFG DtRRsGRFL Q63L92_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFVEGFGxxDTRRSGRFL 81 RAAa<-* RA a Q63L92_BUR 82 RAXA 85 C6U364_BURPE/563-596: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL C6U364_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a C6U364_BUR 82 RAXA 85 C5ZL95_BURPE/549-582: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL C5ZL95_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a C5ZL95_BUR 82 RAXA 85 B1H6U8_BURPE/660-693: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL B1H6U8_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a B1H6U8_BUR 82 RAXA 85 A3P5B6_BURP0/549-582: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A3P5B6_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A3P5B6_BUR 82 RAXA 85 A2RWZ1_BURM9/553-586: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A2RWZ1_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A2RWZ1_BUR 82 RAXA 85 C0YAX4_BURPE/549-582: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL C0YAX4_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a C0YAX4_BUR 82 RAXA 85 A5TGG2_BURML/691-724: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A5TGG2_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A5TGG2_BUR 82 RAXA 85 A9JYS3_BURML/691-724: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A9JYS3_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A9JYS3_BUR 82 RAXA 85 A4MHC0_BURPE/549-582: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A4MHC0_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A4MHC0_BUR 82 RAXA 85 A5J2S5_BURML/691-724: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A5J2S5_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A5J2S5_BUR 82 RAXA 85 B7CEQ6_BURPE/563-596: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL B7CEQ6_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a B7CEQ6_BUR 82 RAXA 85 Q3JMG9_BURP1/665-698: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL Q3JMG9_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a Q3JMG9_BUR 82 RAXA 85 A8KSB2_BURPE/665-698: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A8KSB2_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A8KSB2_BUR 82 RAXA 85 C4I3A0_BURPE/587-620: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL C4I3A0_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a C4I3A0_BUR 82 RAXA 85 A3MDP8_BURM7/553-586: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A3MDP8_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A3MDP8_BUR 82 RAXA 85 A3NJQ2_BURP6/549-582: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A3NJQ2_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A3NJQ2_BUR 82 RAXA 85 A1UUJ2_BURMS/131-164: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL A1UUJ2_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a A1UUJ2_BUR 82 RAXA 85 Q62C70_BURMA/553-586: domain 1 of 1, from 35 to 85: score 51.7, E = 2.3e-13 *->iAAtLvnGqLvY...........RDGA...FvEGFG..DtRRsGRFL iAAtLvnGqLvY + DGA F+EGFG DtRRsGRFL Q62C70_BUR 35 IAATLVNGQLVYxrxxxxxxxxxXDGAxxxFAEGFGxxDTRRSGRFL 81 RAAa<-* RA a Q62C70_BUR 82 RAXA 85 A3RNT0_RALSL/435-482: domain 1 of 1, from 35 to 85: score 3.1, E = 0.43 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ RR+GRFL A3RNT0_RAL 35 IAAVWVNGALAYxrxxxxxxxxxXDGAXXXXVqpxxxXXXRRAGRFL 81 RAAa<-* R A3RNT0_RAL 82 RRGX 85 B5SDI9_RALSL/450-497: domain 1 of 1, from 35 to 85: score 3.1, E = 0.43 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ RR+GRFL B5SDI9_RAL 35 IAAVWVNGALAYxrxxxxxxxxxXDGAXXXXVqpxxxXXXRRAGRFL 81 RAAa<-* R B5SDI9_RAL 82 RRGX 85 F6GA27_RALS8/450-497: domain 1 of 1, from 35 to 85: score -0.6, E = 1.6 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL F6GA27_RAL 35 IAAVWVNGALAYxrxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* R F6GA27_RAL 82 RRGX 85 B5S5R3_RALSL/435-482: domain 1 of 1, from 35 to 85: score -0.6, E = 1.6 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL B5S5R3_RAL 35 IAAVWVNGALAYxrxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* R B5S5R3_RAL 82 RRGX 85 D8P5B0_RALSL/435-482: domain 1 of 1, from 35 to 85: score -0.6, E = 1.6 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL D8P5B0_RAL 35 IAAVWVNGALAYxrxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* R D8P5B0_RAL 82 RRGX 85 D8NE79_RALSL/435-482: domain 1 of 1, from 35 to 85: score -1.2, E = 1.9 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL D8NE79_RAL 35 IAAVWVNGALSYxrxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* R D8NE79_RAL 82 RRGX 85 G3AB95_9RALS/435-482: domain 1 of 1, from 35 to 85: score -1.2, E = 1.9 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL G3AB95_9RA 35 IAAVWVNGTLSYxrxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* R G3AB95_9RA 82 RRGX 85 Q8XQN5_RALSO/435-482: domain 1 of 1, from 35 to 85: score -1.4, E = 2.1 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL i A vnG L Y + DGA ++ RR+GRFL Q8XQN5_RAL 35 IEAVWVNGALSYxrxxxxxxxxxXDGAXXXXVqpxxxXXXRRAGRFL 81 RAAa<-* R Q8XQN5_RAL 82 RRGX 85 D4X6V5_9BURK/438-485: domain 1 of 1, from 35 to 85: score -3.6, E = 4.3 *->iAAtLvnGqLv...........YRDGAFv.....EGFGDtRRsGRFL i A LvnGqLv+ + DGA +++ R GR L D4X6V5_9BU 35 IHAVLVNGQLVexqxxxxxxxxXXDGAXXxxptgXXXXXXARPGRLL 81 RAAa<-* R D4X6V5_9BU 82 RGXD 85 B3RBY2_CUPTR/437-494: domain 1 of 1, from 35 to 67: score -3.9, E = 4.9 *->iAAtLvnGqLvYRDGAFvEGFGDtRRsGRFLRAAa<-* i vnG v+ +G GDt +G A B3RBY2_CUP 35 IDGVWVNGARVWXQQSAQDGAGDT--AGSXXXXAL 67 E2SSV5_9RALS/435-482: domain 1 of 1, from 35 to 85: score -4.5, E = 5.9 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL E2SSV5_9RA 35 IAAVWVNGHLSYxqxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* + E2SSV5_9RA 82 KRXG 85 C6BN90_RALP1/435-482: domain 1 of 1, from 35 to 85: score -4.5, E = 5.9 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL C6BN90_RAL 35 IAAVWVNGHLSYxqxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* + C6BN90_RAL 82 KRXG 85 G3YUE9_9RALS/435-482: domain 1 of 1, from 35 to 85: score -4.5, E = 5.9 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL G3YUE9_9RA 35 IAAVWVNGHLSYxqxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* + G3YUE9_9RA 82 KRXG 85 B2UI91_RALPJ/435-482: domain 1 of 1, from 35 to 85: score -4.5, E = 5.9 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL B2UI91_RAL 35 IAAVWVNGHLSYxqxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* + B2UI91_RAL 82 KRXG 85 D8N1N7_RALSL/435-482: domain 1 of 1, from 35 to 85: score -5.6, E = 8.8 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL D8N1N7_RAL 35 IAAVWVNGTLSYxrxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* D8N1N7_RAL 82 QRXG 85 G2ZS20_9RALS/450-497: domain 1 of 1, from 35 to 85: score -5.6, E = 8.8 *->iAAtLvnGqLvY...........RDGAFvEGF.....GDtRRsGRFL iAA vnG L Y + DGA ++ R+GRFL G2ZS20_9RA 35 IAAVWVNGTLSYxrxxxxxxxxxXDGAXXXXVqpxxxXXXHRAGRFL 81 RAAa<-* G2ZS20_9RA 82 QRXG 85 Histogram of all scores: score obs exp (one = represents 2 sequences) ----- --- --- -31 3 0|== -30 10 0|===== -29 12 0|====== -28 32 0|================ -27 18 0|========= -26 39 0|==================== -25 47 2|*======================= -24 49 12|=====*=================== -23 65 34|================*================ -22 60 63|============================== * -21 60 90|============================== * -20 81 105|========================================= * -19 75 106|====================================== * -18 42 97|===================== * -17 53 82|=========================== * -16 31 66|================ * -15 51 51|=========================* -14 28 39|============== * -13 31 28|=============*== -12 12 21|====== * -11 8 15|==== * -10 11 11|=====* -9 1 7|= * -8 3 5|==* -7 1 4|=* -6 2 2|* -5 4 2|*= -4 2 1|* -3 0 1|* -2 3 0|== > -1 25 -|============= % Statistical details of theoretical EVD fit: mu = -18.9461 lambda = 0.3438 chi-sq statistic = 235.1155 P(chi-square) = 3.404e-42 Total sequences searched: 859 Whole sequence top hits: tophits_s report: Total hits: 62 Satisfying E cutoff: 36 Total memory: 22K Domain top hits: tophits_s report: Total hits: 62 Satisfying E cutoff: 62 Total memory: 38K