FastQCFastQC Report
Пт 13 мар 2015
Ath_tae_CTTGTA_L003_R1_010.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameAth_tae_CTTGTA_L003_R1_010.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2439795
Sequences flagged as poor quality0
Sequence length101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCCGTC5700.022.89249448-49
TATGCCG6250.021.25733446-47
CGTATGC6950.020.48091944-45
GAGCACA11300.018.9246869
TCGGAAG12050.018.501743
AGAGCAC12400.016.8626428
GGCCCGG2406.1750216E-515.8263666
ATGCCGT5900.015.68243146-47
CACACGT8350.015.36639212-13
GCCGTCT5900.014.87835748-49
GATCGGA15000.014.5581661
GTATGCC6750.014.4099744-45
GCACACG6950.014.35916310-11
CGTCTGA9050.014.17404816-17
CACGTCT10000.013.30438114-15
AGCACAC10950.013.23671910-11
AGTCACC9450.013.07161328-29
CGGAAGA16500.012.9369024
ATCGGAA17400.012.8129862
CCGTCTT9900.012.69928250-51
Produced by FastQC (version 0.11.2)