BLASTN 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= U00096 U00096.2 Escherichia coli K12 MG1655, complete genome. (76 letters) Database: Pm 173 sequences; 1,918,246 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE010289 AE009950 |AE010289| Pyrococcus furiosus DSM 3638, secti... 24 5.9 AE010274 AE009950 |AE010274| Pyrococcus furiosus DSM 3638, secti... 24 5.9 AE010244 AE009950 |AE010244| Pyrococcus furiosus DSM 3638, secti... 24 5.9 AE010187 AE009950 |AE010187| Pyrococcus furiosus DSM 3638, secti... 24 5.9 AE010167 AE009950 |AE010167| Pyrococcus furiosus DSM 3638, secti... 24 5.9 AE010153 AE009950 |AE010153| Pyrococcus furiosus DSM 3638, secti... 24 5.9 AE010152 AE009950 |AE010152| Pyrococcus furiosus DSM 3638, secti... 24 5.9 AE010148 AE009950 |AE010148| Pyrococcus furiosus DSM 3638, secti... 24 5.9 >AE010289 AE009950 |AE010289| Pyrococcus furiosus DSM 3638, section 164 of 173 of the complete genome. Length = 11338 Score = 24.3 bits (12), Expect = 5.9 Identities = 12/12 (100%) Strand = Plus / Plus Query: 8 gatacccagagt 19 |||||||||||| Sbjct: 9981 gatacccagagt 9992 >AE010274 AE009950 |AE010274| Pyrococcus furiosus DSM 3638, section 149 of 173 of the complete genome. Length = 10545 Score = 24.3 bits (12), Expect = 5.9 Identities = 12/12 (100%) Strand = Plus / Plus Query: 54 tctaccaactga 65 |||||||||||| Sbjct: 8017 tctaccaactga 8028 >AE010244 AE009950 |AE010244| Pyrococcus furiosus DSM 3638, section 119 of 173 of the complete genome. Length = 10692 Score = 24.3 bits (12), Expect = 5.9 Identities = 12/12 (100%) Strand = Plus / Plus Query: 21 gaactggggacc 32 |||||||||||| Sbjct: 1830 gaactggggacc 1841 >AE010187 AE009950 |AE010187| Pyrococcus furiosus DSM 3638, section 62 of 173 of the complete genome. Length = 11444 Score = 24.3 bits (12), Expect = 5.9 Identities = 12/12 (100%) Strand = Plus / Minus Query: 48 gtgcgctctacc 59 |||||||||||| Sbjct: 3725 gtgcgctctacc 3714 >AE010167 AE009950 |AE010167| Pyrococcus furiosus DSM 3638, section 42 of 173 of the complete genome. Length = 12511 Score = 24.3 bits (12), Expect = 5.9 Identities = 12/12 (100%) Strand = Plus / Minus Query: 1 tggtgctgatac 12 |||||||||||| Sbjct: 6017 tggtgctgatac 6006 >AE010153 AE009950 |AE010153| Pyrococcus furiosus DSM 3638, section 28 of 173 of the complete genome. Length = 10790 Score = 24.3 bits (12), Expect = 5.9 Identities = 12/12 (100%) Strand = Plus / Plus Query: 59 caactgagccat 70 |||||||||||| Sbjct: 3413 caactgagccat 3424 >AE010152 AE009950 |AE010152| Pyrococcus furiosus DSM 3638, section 27 of 173 of the complete genome. Length = 11457 Score = 24.3 bits (12), Expect = 5.9 Identities = 12/12 (100%) Strand = Plus / Plus Query: 36 cccttaccaagg 47 |||||||||||| Sbjct: 3468 cccttaccaagg 3479 >AE010148 AE009950 |AE010148| Pyrococcus furiosus DSM 3638, section 23 of 173 of the complete genome. Length = 14913 Score = 24.3 bits (12), Expect = 5.9 Identities = 12/12 (100%) Strand = Plus / Plus Query: 18 gtcgaactgggg 29 |||||||||||| Sbjct: 4459 gtcgaactgggg 4470 Database: Pm Posted date: Dec 27, 2007 11:53 PM Number of letters in database: 1,918,246 Number of sequences in database: 173 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 173 Number of Hits to DB: 697 Number of extensions: 29 Number of successful extensions: 8 Number of sequences better than 10.0: 8 Number of HSP's gapped: 8 Number of HSP's successfully gapped: 8 Length of query: 76 Length of database: 1,918,246 Length adjustment: 13 Effective length of query: 63 Effective length of database: 1,915,997 Effective search space: 120707811 Effective search space used: 120707811 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 12 (24.3 bits) S2: 12 (24.3 bits)