########################################
# Program: needle
# Rundate: Wed  5 Mar 2008 00:25:08
# Commandline: needle
#    -asequence prot.txt
#    -bsequence prot1.txt
#    -outfile 1
# Align_format: srspair
# Report_file: 1
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: 
# 2: 
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 470
# Identity:     407/470 (86.6%)
# Similarity:   436/470 (92.8%)
# Gaps:           0/470 ( 0.0%)
# Score: 2057.0
# 
#
#=======================================

                   1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNL     50
                     ||||||||||||||||||||..:|:||||||||||||||||||||||:||
                   1 mkktkivctigpkteseemltnllnagmnvmrlnfshgdyaehgqriknl     50

                  51 RNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVI    100
                     |.||:||||.||||||||||||||||||||.|.:|.||||||||||:||:
                  51 ravmaktgkkaailldtkgpeirtmkleggkdaalvagqtftfttdqsvv    100

                 101 GNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNG    150
                     ||.::|||||.||..||.:|||||||||||||||..:..:.|:|||||:|
                 101 gndkivavtypgfaadlkigntvlvddgligmevievtehtvvckvlnsg    150

                 151 DLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDV    200
                     |||||||||||||||.|||||||||.||||||||||||||||||||||||
                 151 dlgenkgvnlpgvsiqlpalaekdkgdlifgceqgvdfvaasfirkrsdv    200

                 201 IEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVE    250
                     :||||||||||||:|.||||||||||||||||||||||||||||||||||
                 201 leirehlkahggehiqiiskienqeglnnfdeileasdgimvargdlgve    250

                 251 IPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVAN    300
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
                 251 ipveevifaqkmmiekcnrarkvvitatqmldsmiknprptraeagdvan    300

                 301 AILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNR    350
                     |||||||||||||||||||||||:|:|||||||||||||.||:|..||||
                 301 aildgtdavmlsgesakgkyplesvtimaticertdrvmpsrieslndnr    350

                 351 KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALT    400
                     |:|||||||||||||||||:|.:|||||.|||||::||||||.|||||||
                 351 kmriteavcrgavetaekleakvivvatgggksaksvrkyfptatilalt    400

                 401 TNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV    450
                     |||.|||||:|:|||:.|||.||.|||||||||||.||.||||.|||||:
                 401 tnemtahqliltkgvitqlvdeiastddfyrlgkeaalasglaqkgdvvi    450

                 451 MVSGALVPSGTTNTASVHVL    470
                     ||||||||||||||:|||||
                 451 mvsgalvpsgttntssvhvl    470


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