MAST - Motif Alignment and Search Tool
MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)
For further information on how to interpret these results or to get
a copy of the MAST software please access http://meme.nbcr.net.
REFERENCE
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
DATABASE AND MOTIFS
DATABASE ./seed.fasta (peptide)
Last updated on Wed May 22 10:44:04 2013
Database contains 33 sequences, 7043 residues
MOTIFS ./memeout.txt (peptide)
MOTIF WIDTH BEST POSSIBLE MATCH
----- ----- -------------------
1 35 AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
2 21 PNTYVPGRNTVFLSMALSWAE
3 18 CGHCDSCRLRRRGFEEAG
PAIRWISE MOTIF CORRELATIONS:
MOTIF 1 2
----- ----- -----
2 0.21
3 0.17 0.06
No overly similar pairs (correlation > 0.60) found.
Random model letter frequencies (from non-redundant database):
A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
W 0.013 Y 0.033
SECTION I: HIGH-SCORING SEQUENCES
- Each of the following 33 sequences has E-value less than 10.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
- finding the score of the single best match of each motif
to the sequence (best matches may overlap),
- calculating the sequence p-value of each score,
- forming the product of the p-values,
- taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
| Links | Sequence Name | Description | E-value | Length
|
|---|
|
| QUEC_OCEIH/5-213
|
| 8.2e-56
| 209
|
|
| QUEC_LEPIN/27-238
|
| 3.7e-55
| 212
|
|
| QUEC_BACTN/5-214
|
| 5e-55
| 210
|
|
| QUEC_BACSU/5-212
|
| 6e-53
| 208
|
|
| QUEC_PSESM/7-218
|
| 5.7e-50
| 212
|
|
| QUEC_THEEB/6-220
|
| 1.1e-47
| 215
|
|
| QUEC_BACHD/7-215
|
| 3.2e-47
| 209
|
|
| QUEC_SYNY3/4-215
|
| 3.1e-46
| 212
|
|
| QUEC_RALSO/4-216
|
| 4.5e-46
| 213
|
|
| QUEC_HALSA/5-215
|
| 1e-45
| 211
|
|
| QUEC_XANAC/3-213
|
| 3e-45
| 211
|
|
| QUEC_CHLTE/2-212
|
| 6.4e-45
| 211
|
|
| QUEC_THEVO/4-214
|
| 1.8e-43
| 211
|
|
| QUEC_STAES/10-217
|
| 1.1e-42
| 208
|
|
| QUEC_ECOLI/3-214
|
| 2.8e-40
| 212
|
|
| QUEC_CAMJE/4-215
|
| 1.5e-39
| 212
|
|
| QUEC_HAEIN/11-220
|
| 8.7e-38
| 210
|
|
| QUEC_RICPR/3-219
|
| 1.2e-37
| 217
|
|
| QUEC_RICCN/4-220
|
| 1.9e-37
| 217
|
|
| QUEC_STRMU/5-211
|
| 3.1e-36
| 207
|
|
| QUEC_VIBVU/3-213
|
| 1.9e-34
| 211
|
|
| QUEC_METTH/2-213
|
| 2.1e-34
| 212
|
|
| QUEC_BRAJA/9-234
|
| 2.7e-34
| 226
|
|
| QUEC_CLOAB/9-218
|
| 1.1e-33
| 210
|
|
| QUEC_CAUCR/8-233
|
| 1.1e-33
| 226
|
|
| QUEC_HELPY/5-222
|
| 6.3e-32
| 218
|
|
| QUEC_BUCAP/3-214
|
| 6.4e-30
| 212
|
|
| QUEC_AQUAE/6-218
|
| 8.3e-29
| 213
|
|
| QUEC_METJA/2-223
|
| 5.8e-25
| 222
|
|
| QUEC_ARCFU/2-209
|
| 1.5e-20
| 208
|
|
| QUEC_PYRFU/4-226
|
| 3.4e-16
| 223
|
|
| QUEC_PYRHO/3-225
|
| 2e-15
| 223
|
|
| QUEC2_SULTO/240-451
|
| 3.9e-13
| 212
|
SECTION II: MOTIF DIAGRAMS
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- occurrence of motif `n' with p-value less than 0.0001.
- Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.
| Links | Name | Expect | Motifs
|
|---|
|
| QUEC_OCEIH/5-213
| 8.2e-56
|
|
|
| QUEC_LEPIN/27-238
| 3.7e-55
|
|
|
| QUEC_BACTN/5-214
| 5e-55
|
|
|
| QUEC_BACSU/5-212
| 6e-53
|
|
|
| QUEC_PSESM/7-218
| 5.7e-50
|
|
|
| QUEC_THEEB/6-220
| 1.1e-47
|
|
|
| QUEC_BACHD/7-215
| 3.2e-47
|
|
|
| QUEC_SYNY3/4-215
| 3.1e-46
|
|
|
| QUEC_RALSO/4-216
| 4.5e-46
|
|
|
| QUEC_HALSA/5-215
| 1e-45
|
|
|
| QUEC_XANAC/3-213
| 3e-45
|
|
|
| QUEC_CHLTE/2-212
| 6.4e-45
|
|
|
| QUEC_THEVO/4-214
| 1.8e-43
|
|
|
| QUEC_STAES/10-217
| 1.1e-42
|
|
|
| QUEC_ECOLI/3-214
| 2.8e-40
|
|
|
| QUEC_CAMJE/4-215
| 1.5e-39
|
|
|
| QUEC_HAEIN/11-220
| 8.7e-38
|
|
|
| QUEC_RICPR/3-219
| 1.2e-37
|
|
|
| QUEC_RICCN/4-220
| 1.9e-37
|
|
|
| QUEC_STRMU/5-211
| 3.1e-36
|
|
|
| QUEC_VIBVU/3-213
| 1.9e-34
|
|
|
| QUEC_METTH/2-213
| 2.1e-34
|
|
|
| QUEC_BRAJA/9-234
| 2.7e-34
|
|
|
| QUEC_CLOAB/9-218
| 1.1e-33
|
|
|
| QUEC_CAUCR/8-233
| 1.1e-33
|
|
|
| QUEC_HELPY/5-222
| 6.3e-32
|
|
|
| QUEC_BUCAP/3-214
| 6.4e-30
|
|
|
| QUEC_AQUAE/6-218
| 8.3e-29
|
|
|
| QUEC_METJA/2-223
| 5.8e-25
|
|
|
| QUEC_ARCFU/2-209
| 1.5e-20
|
|
|
| QUEC_PYRFU/4-226
| 3.4e-16
|
|
|
| QUEC_PYRHO/3-225
| 2e-15
|
|
|
| QUEC2_SULTO/240-451
| 3.9e-13
|
|
| SCALE
|
| | |
| |
| |
| |
| |
| |
| |
| |
| |
| 1 |
25 |
50 |
75 |
100 |
125 |
150 |
175 |
200 |
|
|---|
SECTION III: ANNOTATED SEQUENCES
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
- the motif number of the occurrence,
- the position p-value of the occurrence,
- the best possible match to the motif, and
- columns whose match to the motif has a positive score (indicated
by a plus sign).
QUEC_OCEIH/5-213
LENGTH = 209 COMBINED P-VALUE = 2.48e-57 E-VALUE = 8.2e-56
DIAGRAM: 88-[2]-3-[1]-44-[3]
[2] [1]
6.0e-23 3.1e-27
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++++++ ++ ++++++++++++++++++++++++++++ +++
76 SMEVSQEGVGEDVPNTYVPGRNTIFLSIAASYAEAIGAEKIYVGVSAVDYSGYPDCRPEFIEAMQQTIYQGTNAN
[3]
2.1e-19
CGHCDSCRLRRRGFEEAG
++++++++++++++++++
151 PAMTIEAPLIDLSKGDTVKLGMKLNVPYHLTTSCYLGGEEACGECDSCRLRLQGFEEAG
QUEC_LEPIN/27-238
LENGTH = 212 COMBINED P-VALUE = 1.13e-56 E-VALUE = 3.7e-55
DIAGRAM: 87-[2]-3-[1]-48-[3]
[2] [1]
2.0e-20 4.5e-31
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++ +++++++++++ + ++++++++++++++++++++++++++++++++
76 HVPKNSLRKEEIPNTYVPGRNILFLSFAVSLAEGTGSDSIYIGVNSMDYSGYPDCRPEFIKMFEMAIQLGTKKGS
[3]
2.0e-17
CGHCDSCRLRRRGFEEAG
++ +++++++++++++ +
151 QGPSIKILTPLQNLSKKEIVLLGNQLKVPFHLTFSCYDPKNGKACGKCDACLLRKKGFQETG
QUEC_BACTN/5-214
LENGTH = 210 COMBINED P-VALUE = 1.53e-56 E-VALUE = 5e-55
DIAGRAM: 87-[2]-3-[1]-46-[3]
[2] [1]
3.0e-20 8.8e-31
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++++++ +++++++++++++++++++++++++++++++++++
76 MVMDQEKPAGSVPNTFVPGRNLFFLSIAAVYARERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQF
[3]
9.3e-18
CGHCDSCRLRRRGFEEAG
++++++++++++++++++
151 VIHTPLMWIDKAETWALADELGVLDLIRNETLTCYNGIQGDGCGHCPACTLRREGLEKYL
QUEC_BACSU/5-212
LENGTH = 208 COMBINED P-VALUE = 1.81e-54 E-VALUE = 6e-53
DIAGRAM: 85-[2]-3-[1]-46-[3]
[2] [1]
3.7e-19 1.9e-31
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++ +++ +++++++++++++++++++++++++++++++++++
76 IEIEVKDGELPSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVI
[3]
4.5e-16
CGHCDSCRLRRRGFEEAG
++++++++++ +++++++
151 HTPLMWLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECPACHLRSKGYEEYM
QUEC_PSESM/7-218
LENGTH = 212 COMBINED P-VALUE = 1.72e-51 E-VALUE = 5.7e-50
DIAGRAM: 86-[2]-3-[1]-49-[3]
[2] [1]
2.2e-21 9.7e-30
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++ +++ ++++++++++++++++++++++++++++ ++++++
76 IAVPESPSEGIPVTYVPARNTVFLSLALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVE
[3]
1.5e-12
CGHCDSCRLRRRGFEEAG
++ +++++++ ++++ +
151 GQGFTIRAPLQNLSKSDIVKAGIALGVDYALTVSCYQADDQGRACGKCDSCRLRAEGFTASG
QUEC_THEEB/6-220
LENGTH = 215 COMBINED P-VALUE = 3.25e-49 E-VALUE = 1.1e-47
DIAGRAM: 91-[2]-3-[1]-47-[3]
[2] [1]
5.6e-21 4.0e-24
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
++++++++++++++ ++++++ ++ + +++++++++++++++++++ +++++ ++++
76 IDLPRDRDLATMSQEIPVTYVPARNTIFLSVALAYAEALEARSVHIGVNALDYSGYPDCRPDYIAAMQEVYRLGT
[3]
2.8e-16
CGHCDSCRLRRRGFEEAG
+++++++++++ ++ + +
151 KQGREGQPIEIVTPLIDLHKTDIIRLGHGYGVPWEKTWSCYSDGQQACGRCDACRLRLAAFAELG
QUEC_BACHD/7-215
LENGTH = 209 COMBINED P-VALUE = 9.56e-49 E-VALUE = 3.2e-47
DIAGRAM: 86-[2]-3-[1]-46-[3]
[2] [1]
1.6e-16 1.4e-27
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
++++++++++++++++++++ +++++++++++++++++++++ +++++++++++++
76 IAVKDGENGELPSTFVPGRNQLFLSFAAVYAKQIGARHLVTGVCETDYSGYPDCRDVFIKSLNVTLNLAMDDQFV
[3]
9.3e-17
CGHCDSCRLRRRGFEEAG
++++++++++++++++++
151 IHTPLMWLDKAETWKLADELGALDFVREKTLTCYHGIRGDGCGECPACMLRRRGLELYL
QUEC_SYNY3/4-215
LENGTH = 212 COMBINED P-VALUE = 9.28e-48 E-VALUE = 3.1e-46
DIAGRAM: 88-[2]-3-[1]-47-[3]
[2] [1]
2.7e-19 3.3e-23
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++ +++++ ++++++++++ +++++++++++++ +++++ +++
76 QTLPQTGVEPDIIPSTYVPGRNTVFIALGLSLAEAKGAEAVFLGINAIDYSGYPDCRPEYLATYQQLAALSSKVG
[3]
2.3e-17
CGHCDSCRLRRRGFEEAG
++++++++++++++++++
151 VEGRPIQLLAPLIELSKVDIVHKALELGVPIAQTWSCYAGGEEPCGRCDSCRLRDQALIEAG
QUEC_RALSO/4-216
LENGTH = 213 COMBINED P-VALUE = 1.37e-47 E-VALUE = 4.5e-46
DIAGRAM: 87-[2]-3-[1]-49-[3]
[2] [1]
1.1e-16 2.8e-30
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++ +++++ +++ ++++++++++++++++++++++++ ++++++++++
76 LEVPTTGVQEGIPITYVPARNTIMLSLALGWAEAVGARDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGV
[3]
9.5e-13
CGHCDSCRLRRRGFEEAG
+++++++++++ +++ +
151 EGDHIRVNAPIIAMTKAEIIQAGARLGVDYSLTVSCYQADDEGRACGVCDSCRIRRAGFEAAA
QUEC_HALSA/5-215
LENGTH = 211 COMBINED P-VALUE = 3.03e-47 E-VALUE = 1e-45
DIAGRAM: 90-[2]-3-[1]-44-[3]
[2] [1]
8.7e-19 7.4e-25
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++++++ +++++++++++++++++++ +++++++++++ ++
76 DEMAVADADMESDEIPTSYVPFRNANLLAMATSYAEANDCEAVFIGAHSEDFSGYPDCQPAFFEAFQQTVAAGTK
[3]
1.0e-15
CGHCDSCRLRRRGFEEAG
++++++++++++++++ +
151 PDTEISINAPFVDWSKTDIAERGLELGVPYEHTWSCYRAEAPACGTCDACAFRLQAFQNLG
QUEC_XANAC/3-213
LENGTH = 211 COMBINED P-VALUE = 9.18e-47 E-VALUE = 3e-45
DIAGRAM: 85-[2]-3-[1]-49-[3]
[2] [1]
7.4e-17 7.6e-26
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++ +++++ +++ +++++ ++++++++++++++++++ ++++++++++
76 EVPDAGGDGIPVTYVPARNTIMLSLALGWAEVIGANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEG
[3]
3.7e-16
CGHCDSCRLRRRGFEEAG
++++++++++ ++ +++
151 AGLRVHAPLQFLSKADIVREGVRLGVDFGVTVSCYRADADGRACGHCDACRLRAAGFADAG
QUEC_CHLTE/2-212
LENGTH = 211 COMBINED P-VALUE = 1.94e-46 E-VALUE = 6.4e-45
DIAGRAM: 90-[2]-3-[1]-44-[3]
[2] [1]
2.3e-20 8.4e-24
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++++ + +++++++++++++++++++++ +++++++++ ++
76 ATIPVGPADLAGTDIPTSYVPFRNANFLSMAVSWSEVIGANRIYIGAVEEDSSGYPDCRKVFYDAFNQVIEHGTR
[3]
2.3e-14
CGHCDSCRLRRRGFEEAG
++++++++++++++ +
151 PETRIEIVTPLIAMSKAEIVRRGMELDAPFHFSWSCYKSEGKACGVCDSCARRLRAFASVG
QUEC_THEVO/4-214
LENGTH = 211 COMBINED P-VALUE = 5.44e-45 E-VALUE = 1.8e-43
DIAGRAM: 88-[2]-3-[1]-46-[3]
[2] [1]
1.2e-21 4.7e-22
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++++++ + +++++++ ++++++++++++++++++++ +++
76 VPSRDISTIEEEIPVTYVPARNTIFLSIAAAYAESLGTNEVFIGANAIDYSGYPDCRPEYFNAMENALSLGTKIG
[3]
2.4e-13
CGHCDSCRLRRRGFEEAG
+++++++ ++++++ +++
151 LKEKFHINVPLQYLSKADIVKLGVKLNVPYELTWSCYKGEEEACGECDSCQLRLKGFMEAG
QUEC_STAES/10-217
LENGTH = 208 COMBINED P-VALUE = 3.45e-44 E-VALUE = 1.1e-42
DIAGRAM: 85-[2]-3-[1]-46-[3]
[2] [1]
2.7e-16 1.9e-26
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
++++++++++++++++ ++++ +++++++++++++++++++++ +++++++++ +++
76 LSIEDNDDGIPNTFVPARNLLFLSFAGALAYQIHAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVI
[3]
1.8e-13
CGHCDSCRLRRRGFEEAG
++++++++++ +++ ++
151 HTPLMWLDKAQTWALSDKLGVLDYIRHNTLTCYNGIIGDGCGECPACHLRARGLKHYL
QUEC_ECOLI/3-214
LENGTH = 212 COMBINED P-VALUE = 8.61e-42 E-VALUE = 2.8e-40
DIAGRAM: 89-[2]-3-[1]-46-[3]
[2] [1]
2.4e-17 2.9e-26
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++ +++++++ +++ +++++++++++++++++++++++++++++++ +++
76 SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAK
[3]
3.4e-10
CGHCDSCRLRRRGFEEAG
++++ +++++ ++ ++
151 DIRFETPLMWIDKAETWALADYYGKLDLVRNETLTCYNGFKGDGCGHCAACNLRANGLNHYL
QUEC_CAMJE/4-215
LENGTH = 212 COMBINED P-VALUE = 4.54e-41 E-VALUE = 1.5e-39
DIAGRAM: 91-[2]-3-[1]-44-[3]
[2] [1]
2.3e-15 2.7e-18
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++ ++++++ ++++ ++ +++++++++ ++++++ +++++ ++ ++ ++
76 KSIDIPKNELCTSDTPPITYVPFRNGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGT
[3]
2.1e-19
CGHCDSCRLRRRGFEEAG
++++++++++++++++++
151 SKNFKVCIKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKAG
QUEC_HAEIN/11-220
LENGTH = 210 COMBINED P-VALUE = 2.63e-39 E-VALUE = 8.7e-38
DIAGRAM: 87-[2]-3-[1]-46-[3]
[2] [1]
4.9e-12 3.4e-27
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++ +++++++ +++ ++ +++++++++++++++++++++ +++++++++++++
76 EQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPI
[3]
5.1e-12
CGHCDSCRLRRRGFEEAG
+ +++++++ +++ +++
151 PISKTPLMYLTKAQTWQLADELGVLDYVQKHTHTCYEGIEGGCRKCPSCILRNKGLKKYL
QUEC_RICPR/3-219
LENGTH = 217 COMBINED P-VALUE = 3.49e-39 E-VALUE = 1.2e-37
DIAGRAM: 91-[2]-3-[1]-49-[3]
[2] [1]
3.0e-19 1.0e-21
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++ +++ ++++++++ ++ ++++ +++++++++++++++
76 IDVPYYHGINALPEIVPVTYVPARNTIFLSYAVGFAEVIGSQDIFIGVHTSDSANYPDCCPEYIQSFEKMVNLAT
[3]
3.4e-10
CGHCDSCRLRRRGFEEAG
++ + ++++++ ++ ++
151 NMGVQGKKITIHAPLIDMTKEQIIRTGLKLGVDYKNTISCYSPTEDDLSCGNCLACIIRLDAFKKNN
QUEC_RICCN/4-220
LENGTH = 217 COMBINED P-VALUE = 5.76e-39 E-VALUE = 1.9e-37
DIAGRAM: 91-[2]-3-[1]-49-[3]
[2] [1]
4.6e-19 4.9e-23
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++++ ++ +++++++++ ++ ++++++++++++++++++++
76 IDVPKFQNTDQLPSDIPVTYVPARNTIFLSYALGVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLAT
[3]
7.3e-09
CGHCDSCRLRRRGFEEAG
++ + +++ ++ ++ ++
151 RVGVNGEKITIHAPLINMTKEQIIKKGLELGVDYSKTISCYDPTEDGLSCGQCLSCIARLDAFKKNN
QUEC_STRMU/5-211
LENGTH = 207 COMBINED P-VALUE = 9.33e-38 E-VALUE = 3.1e-36
DIAGRAM: 84-[2]-3-[1]-46-[3]
[2] [1]
1.8e-12 8.5e-27
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++ +++ ++++++++++ +++++++++++++++++++++ +++++++++++++
76 AIETKDGEVPNTFVDGRNHLFLSFAAVLAKQRKIRDIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIQ
[3]
2.2e-10
CGHCDSCRLRRRGFEEAG
+ +++++++ ++++++
151 TPLMWLDKAETWELADQLGKFDYVRQKTLTCYNGIRGTGCRQCPACHLRQAGLEKYL
QUEC_VIBVU/3-213
LENGTH = 211 COMBINED P-VALUE = 5.85e-36 E-VALUE = 1.9e-34
DIAGRAM: 88-[2]-3-[1]-46-[3]
[2] [1]
4.2e-15 5.6e-22
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++ ++++++ +++ ++ +++++++++++++++++++++++++ ++ ++
76 DIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGAQTIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKP
[3]
9.3e-11
CGHCDSCRLRRRGFEEAG
++ ++++++++ ++ +++
151 LVIQTPLMWLNKTETWALADQNNALQLVREKTLTCYNGIIGDGCGDCPSCHLRKVGLNDYL
QUEC_METTH/2-213
LENGTH = 212 COMBINED P-VALUE = 6.47e-36 E-VALUE = 2.1e-34
DIAGRAM: 93-[2]-3-[1]-42-[3]
[2] [1]
1.0e-14 4.7e-15
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANL
+++++++++ ++ +++++ + ++++++ + ++++ +++++++ ++ +
76 DIPSPSNLDDTVECLETARKVWVPGRNLVFTSIGVSFAEAMDAGAVIVGWDLEEAETFPDNSEEFLDAFNRLLEI
[3]
5.0e-18
GM CGHCDSCRLRRRGFEEAG
++ ++++++++++++++++++
151 GTLDGVRVVAPVIGMTKREIVEAGHEVGLPFELTYSCYAGDRVHCGVCESCMRRRRAFELAG
QUEC_BRAJA/9-234
LENGTH = 226 COMBINED P-VALUE = 8.30e-36 E-VALUE = 2.7e-34
DIAGRAM: 94-[2]-3-[1]-55-[3]
[2] [1]
6.4e-19 8.7e-20
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMAN
+++++++++++++++++++++ + +++ + ++++++++++++++ + ++++++
76 ISDTALTRDVAIAMGADGLPNTFVPGRNLVFLTFAAALAYRRGITHIVGGMCETDYSGYPDCRDETVRAMQAALS
[3]
4.5e-09
LGM CGHCDSCRLRRRGFEEA
+++ +++++++ ++ ++ ++
151 LGMARKFELHTPLMWIDKAATWKLAHDLGGEGLVDLIREQSHTCYLGERGAQHEWGYGCGECPACSLRAKGWNEY
G
226 V
QUEC_CLOAB/9-218
LENGTH = 210 COMBINED P-VALUE = 3.34e-35 E-VALUE = 1.1e-33
DIAGRAM: 87-[2]-3-[1]-46-[3]
[2] [1]
6.8e-14 8.7e-23
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++ ++++++++++++++ ++ +++++++ ++++++++++ +++++++++++++
76 MKVDEDAPKDGPPNTFVDGRNLLFLSFAAVFAKQRGINNIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQF
[3]
2.2e-10
CGHCDSCRLRRRGFEEAG
+++++++ +++ ++ ++
151 VLITPLMWIDKAETWKLADDLGVLDIVKNETLTCYNGIKGNGCGECPACKLRKNGYVEFK
QUEC_CAUCR/8-233
LENGTH = 226 COMBINED P-VALUE = 3.45e-35 E-VALUE = 1.1e-33
DIAGRAM: 94-[2]-3-[1]-55-[3]
[2] [1]
3.3e-18 6.5e-21
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMAN
++++++++++++++++++++ +++++ + ++++++++++++ + +++++++++
76 VAQSALTADRAIEMTERGLPSTFVPGRNLVFLTYAAALADRRGIDALVGGMCETDFSGYPDCRRDTLDAMQAALN
[3]
4.9e-08
LGM CGHCDSCRLRRRGFEEA
+++ +++++++ ++ +++ +
151 LGMDRNFRIETPLMWLTKAQTWGLSKQLGGEALVSLIVEESHTCYQGERGQLHAWGHGCGTCPACELREKGYVEW
G
226 D
QUEC_HELPY/5-222
LENGTH = 218 COMBINED P-VALUE = 1.92e-33 E-VALUE = 6.3e-32
DIAGRAM: 89-[2]-3-[1]-52-[3]
[2] [1]
2.1e-15 3.4e-19
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++++++++ +++++ + + +++++ ++++++++ +++++ ++++++++
76 NDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNT
[3]
1.0e-10
CGHCDSCRLRRRGFEEAG
+ ++++ +++++++++
151 AIKILTPLMFLNKAQEFQMAKDLGVLDLVIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQ
QUEC_BUCAP/3-214
LENGTH = 212 COMBINED P-VALUE = 1.93e-31 E-VALUE = 6.4e-30
DIAGRAM: 89-[2]-3-[1]-46-[3]
[2] [1]
9.0e-17 1.5e-19
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++ +++++ + +++ ++ +++++++ +++++++++ ++++ ++ ++++++
76 KISILDNHPLNFSLPSTFVPGRNILFLTLSSIYAFNHQINSIVLGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNC
[3]
7.0e-07
CGHCDSCRLRRRGFEEAG
++ + +++++ ++ +
151 KINFQSPLINLSKAEIWALSDYWNSTQFILNNTVTCYQGIQGKGCGQCQSCILRNDGFNKWK
QUEC_AQUAE/6-218
LENGTH = 213 COMBINED P-VALUE = 2.50e-30 E-VALUE = 8.3e-29
DIAGRAM: 89-[2]-2-[1]-48-[3]
[2] [1]
5.6e-16 2.4e-13
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++ ++++++++++++++++ + ++ ++++++++++++ +++++ ++
76 SVEVPKGEYPENEPPVTTVPMRNLIFLSIASAFADNLEVNYIGIGVHALDTPYPDCRPEFITAAEAAINAGSTFV
[3]
9.1e-13
CGHCDSCRLRRRGFEEAG
++++++++++ ++++ +
151 AKKKERMHVYAPFLGMSKRDIALLGKELGVPFEKTYSCYMGTEPPCGECPTCIQREEALRGIL
QUEC_METJA/2-223
LENGTH = 222 COMBINED P-VALUE = 1.76e-26 E-VALUE = 5.8e-25
DIAGRAM: 95-[2]-3-[1]-50-[3]
[2] [1]
1.7e-10 4.3e-15
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMA
++++++ + +++ +++ ++ ++++++ + ++++ ++++++++++
76 KEIPTLKMEELDSEKAYETMKAVWVPARNVIMFGIASGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVL
[3]
1.3e-12
NLGM CGHCDSCRLRRRGFEEAG
++ ++ +++++++++++ ++
151 EYGTLNKVKIEAPLYDKTKEEIVKLGAELEKKLGVEVLKYSYSCYHDNGEDFLHCGKCESCMRRKRAFLMAG
QUEC_ARCFU/2-209
LENGTH = 208 COMBINED P-VALUE = 4.46e-22 E-VALUE = 1.5e-20
DIAGRAM: 88-[2]-3-[1]-43-[3]
[2] [1]
1.2e-11 2.4e-13
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+ +++++++++++++ ++ ++ + + ++ +++ ++++++++++++ +++ ++
76 EEVPKAFYSEEVQRRTIVPNRNMILLSIAAGYAVKIGAKEVHYAAHLSDYSIYPDCRKEFVKALDTAVYLANIWT
[3]
1.5e-08
CGHCDSCRLRRRGFEEAG
+ ++ +++ + +++ ++
151 PVEVRAPFVDMTKADIVRLGLKLGVPYELTWSCYEGGDRPCLSCGTCLERTEAFLANG
QUEC_PYRFU/4-226
LENGTH = 223 COMBINED P-VALUE = 1.04e-17 E-VALUE = 3.4e-16
DIAGRAM: 98-[2]-3-[1]-66
[2] [1]
9.1e-12 1.1e-13
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQ
+ + +++++++++ ++++ +++++ +++ ++++ ++++ ++
76 VGGEVPRVTAEELEDIEKASETARSVWIPARNLVLISVAASLLDALGGGDIIVGFNAEEATTFPDNSREFVEKLN
VMANLGM
++++ ++
151 EALRFATLNPVKVVAPLIDLDKRGIAKLLKELNAKYEYSNSCYNPKGFTEDGRPIHCGECESCVRRHKGLIEG
QUEC_PYRHO/3-225
LENGTH = 223 COMBINED P-VALUE = 6.05e-17 E-VALUE = 2e-15
DIAGRAM: 98-[2]-3-[1]-66
[2] [1]
5.4e-14 1.3e-10
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQ
+ ++++++++++++++++ +++++ + + ++++ +++++ +
76 VEGNVPRVSASELEVIERAKETARSVWVPARNLVLISIAASLLDALGGGDIIVGFNKEEGETFPDNTKEFVERVN
VMANLGM
+++ ++
151 KALEYATMNKVRVVAPLIELDKRGIARLLKELGAKYEYSNSCYDPKGFTEDGKPIHCGRCESCVRRHRGLMEG
QUEC2_SULTO/240-451
LENGTH = 212 COMBINED P-VALUE = 1.19e-14 E-VALUE = 3.9e-13
DIAGRAM: 91-[2]-3-[1]-44-[3]
[2] [1]
9.8e-11 1.5e-07
PNTYVPGRNTVFLSMALSWAE AQHIFIGVNQTDYSGYPDCRPEFIQAFQVMANLGM
+++++++++ + ++++++ +++ +++ + ++++ +++ + ++ ++
76 GGEIVKDRLGEEGAEFAHEWVPARNLIFYSVALALAEAYGYDAIASGINLEEAGAYPDNEMEFVRLFAKLSPYAT
[3]
1.6e-07
CGHCDSCRLRRRGFEEAG
++ + + ++ +++ ++
151 GPNKKVEVMMPVGNLVKHEIVKLGVEIGAPLHLTWSCYEGGQKHCGKCGPCYMRKMAFRING
Debugging Information
CPU: kodomo.fbb.msu.ru
Time 0.012000 secs.
mast ./memeout.txt -d ./seed.fasta -ev 10.000000 -mt 0.000100
Button Help
Links to Entrez database at NCBI
Links to sequence scores (section I)
Links to motif diagrams (section II)
Links to sequence/motif annotated alignments (section III)
This information