REM -------------------------------------------------------------------- 5O5S REM 5O5S REM STRIDE: Knowledge-based secondary structure assignment 5O5S REM Please cite: D.Frishman & P.Argos, Proteins XX, XXX-XXX, 1995 5O5S REM 5O5S REM Residue accessible surface area calculation 5O5S REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 5O5S REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 5O5S REM 5O5S REM ------------------------ General information ----------------------- 5O5S REM 5O5S HDR CHAPERONE 02-JUN-17 5O5S 5O5S CMP MOL_ID: 1; 5O5S CMP MOLECULE: RNASE ADAPTER PROTEIN RAPZ; 5O5S CMP CHAIN: A; 5O5S CMP FRAGMENT: C-TERMINAL DOMAIN, UNP RESIDUES 154-284; 5O5S CMP ENGINEERED: YES 5O5S SRC MOL_ID: 1; 5O5S SRC ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; 5O5S SRC ORGANISM_TAXID: 562; 5O5S SRC GENE: RAPZ, YHBJ, B3205, JW3172; 5O5S SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); 5O5S SRC EXPRESSION_SYSTEM_TAXID: 469008; 5O5S SRC EXPRESSION_SYSTEM_VARIANT: ROSETTA 5O5S AUT G.M.GONZALEZ,S.DURICA-MITIC,S.W.HARDWICK,M.MONCRIEFFE,M.RESCH 5O5S AUT P.NEUMANN,R.FICNER,B.GORKE,B.F.LUISI 5O5S REM 5O5S REM -------------------- Secondary structure summary ------------------- 5O5S REM 5O5S CHN /home/proj/stride/tmp/tmpw6VAm5pdb A 5O5S REM 5O5S REM . . . . . 5O5S SEQ 1 ELTMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAF 50 5O5S STR EEEEEEEEGGG TTTTTEEEETTTT TTTTTTTTTTTTTTHHHHHH 5O5S REM 5O5S REM . . . . . 5O5S SEQ 51 LDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIA 100 5O5S STR HHH HHHHHHHHHHHHHHHHHHHHHHTTTT EEEEEEEETTT HHHHHHH 5O5S REM 5O5S REM . . 5O5S SEQ 101 EQLADYFRSRGKNVQSRHRTLEK 123 5O5S STR HHHHHHHHHH EEEEETTTT 5O5S REM 5O5S REM 5O5S REM 5O5S LOC AlphaHelix LYS 203 A ARG 211 A 5O5S LOC AlphaHelix THR 213 A GLU 234 A 5O5S LOC AlphaHelix HIS 252 A ARG 268 A 5O5S LOC 310Helix PHE 169 A HIS 171 A 5O5S LOC Strand THR 161 A GLY 168 A 5O5S LOC Strand TYR 179 A ASP 182 A 5O5S LOC Strand TYR 240 A CYS 247 A 5O5S LOC Strand VAL 272 A HIS 276 A 5O5S LOC TurnI PRO 174 A ALA 177 A 5O5S LOC TurnVIII ALA 177 A VAL 180 A 5O5S LOC TurnI VAL 183 A LEU 186 A 5O5S LOC TurnI PRO 189 A ASP 192 A 5O5S LOC TurnI ASP 192 A LEU 195 A 5O5S LOC TurnI PRO 193 A ARG 196 A 5O5S LOC TurnIV LYS 194 A PRO 197 A 5O5S LOC TurnI LEU 195 A MET 198 A 5O5S LOC TurnI THR 199 A ASP 202 A 5O5S LOC TurnIV THR 235 A ARG 238 A 5O5S LOC TurnI CYS 247 A GLY 250 A 5O5S LOC TurnI HIS 276 A LEU 279 A 5O5S LOC TurnI ARG 277 A GLU 280 A 5O5S REM 5O5S REM --------------- Detailed secondary structure assignment------------- 5O5S REM 5O5S REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 5O5S ASG GLU A 159 1 C Coil 360.00 156.52 131.7 5O5S ASG LEU A 160 2 C Coil -53.34 130.45 15.1 5O5S ASG THR A 161 3 E Strand -96.68 122.22 23.3 5O5S ASG MET A 162 4 E Strand -91.98 117.18 2.2 5O5S ASG VAL A 163 5 E Strand -103.65 129.31 14.4 5O5S ASG PHE A 164 6 E Strand -114.29 115.92 0.0 5O5S ASG GLU A 165 7 E Strand -124.66 140.42 0.2 5O5S ASG SER A 166 8 E Strand -97.36 153.08 0.0 5O5S ASG PHE A 167 9 E Strand -157.91 167.47 3.6 5O5S ASG GLY A 168 10 E Strand -104.37 128.32 0.4 5O5S ASG PHE A 169 11 G 310Helix -55.70 -28.56 47.0 5O5S ASG LYS A 170 12 G 310Helix -63.49 -19.54 123.2 5O5S ASG HIS A 171 13 G 310Helix -100.93 -2.49 102.2 5O5S ASG GLY A 172 14 C Coil 95.93 157.28 37.8 5O5S ASG ILE A 173 15 C Coil -75.53 133.45 94.1 5O5S ASG PRO A 174 16 T Turn -60.55 137.71 13.7 5O5S ASG ILE A 175 17 T Turn -73.23 -14.34 174.3 5O5S ASG ASP A 176 18 T Turn -91.41 4.95 58.4 5O5S ASG ALA A 177 19 T Turn -72.84 140.74 26.1 5O5S ASG ASP A 178 20 T Turn -102.49 -42.89 75.7 5O5S ASG TYR A 179 21 E Strand -115.74 143.06 61.4 5O5S ASG VAL A 180 22 E Strand -130.21 128.34 58.5 5O5S ASG PHE A 181 23 E Strand -121.53 123.58 36.6 5O5S ASG ASP A 182 24 E Strand -86.19 124.44 66.3 5O5S ASG VAL A 183 25 T Turn -112.54 19.69 0.0 5O5S ASG ARG A 184 26 T Turn -67.51 -7.31 103.6 5O5S ASG PHE A 185 27 T Turn -88.58 -10.20 132.4 5O5S ASG LEU A 186 28 T Turn -78.42 162.57 4.3 5O5S ASG PRO A 187 29 C Coil -53.28 135.59 21.1 5O5S ASG ASN A 188 30 C Coil -106.12 115.78 55.3 5O5S ASG PRO A 189 31 T Turn -82.30 9.29 0.8 5O5S ASG HIS A 190 32 T Turn -63.23 -25.37 106.9 5O5S ASG TRP A 191 33 T Turn -101.06 -8.65 191.7 5O5S ASG ASP A 192 34 T Turn -77.96 109.41 67.3 5O5S ASG PRO A 193 35 T Turn -61.03 -30.22 104.5 5O5S ASG LYS A 194 36 T Turn -67.05 -31.28 70.6 5O5S ASG LEU A 195 37 T Turn -86.30 -26.59 6.4 5O5S ASG ARG A 196 38 T Turn -50.00 -50.21 38.2 5O5S ASG PRO A 197 39 T Turn -75.52 -9.19 92.6 5O5S ASG MET A 198 40 T Turn -83.82 176.52 54.0 5O5S ASG THR A 199 41 T Turn -123.89 173.28 23.5 5O5S ASG GLY A 200 42 T Turn -72.76 0.50 3.4 5O5S ASG LEU A 201 43 T Turn -80.50 -15.36 79.2 5O5S ASG ASP A 202 44 T Turn -92.14 141.67 62.8 5O5S ASG LYS A 203 45 H AlphaHelix -58.46 -38.68 170.6 5O5S ASG PRO A 204 46 H AlphaHelix -65.30 -32.62 61.9 5O5S ASG VAL A 205 47 H AlphaHelix -74.18 -42.63 0.0 5O5S ASG ALA A 206 48 H AlphaHelix -58.61 -41.68 24.2 5O5S ASG ALA A 207 49 H AlphaHelix -66.85 -40.22 52.2 5O5S ASG PHE A 208 50 H AlphaHelix -57.51 -41.56 33.3 5O5S ASG LEU A 209 51 H AlphaHelix -75.53 -47.38 2.2 5O5S ASG ASP A 210 52 H AlphaHelix -69.61 -13.23 86.9 5O5S ASG ARG A 211 53 H AlphaHelix -72.59 -4.40 173.1 5O5S ASG HIS A 212 54 C Coil -107.09 126.90 58.9 5O5S ASG THR A 213 55 H AlphaHelix -61.75 -30.07 118.6 5O5S ASG GLU A 214 56 H AlphaHelix -69.18 -18.52 77.7 5O5S ASG VAL A 215 57 H AlphaHelix -71.41 -53.33 0.4 5O5S ASG HIS A 216 58 H AlphaHelix -59.55 -39.45 111.9 5O5S ASG ASN A 217 59 H AlphaHelix -64.48 -38.99 74.8 5O5S ASG PHE A 218 60 H AlphaHelix -59.30 -43.81 29.8 5O5S ASG ILE A 219 61 H AlphaHelix -63.04 -49.72 17.6 5O5S ASG TYR A 220 62 H AlphaHelix -61.32 -45.90 98.1 5O5S ASG GLN A 221 63 H AlphaHelix -70.08 -34.44 96.3 5O5S ASG THR A 222 64 H AlphaHelix -71.60 -42.13 8.9 5O5S ASG ARG A 223 65 H AlphaHelix -65.56 -32.33 58.5 5O5S ASG SER A 224 66 H AlphaHelix -68.74 -41.63 26.9 5O5S ASG TYR A 225 67 H AlphaHelix -60.64 -46.90 105.5 5O5S ASG LEU A 226 68 H AlphaHelix -61.04 -38.28 1.1 5O5S ASG GLU A 227 69 H AlphaHelix -61.87 -21.84 58.4 5O5S ASG LEU A 228 70 H AlphaHelix -63.18 -35.02 102.9 5O5S ASG TRP A 229 71 H AlphaHelix -104.40 -14.31 89.4 5O5S ASG LEU A 230 72 H AlphaHelix -56.91 -42.74 5.2 5O5S ASG PRO A 231 73 H AlphaHelix -59.10 -38.21 81.3 5O5S ASG MET A 232 74 H AlphaHelix -75.93 -28.11 119.8 5O5S ASG LEU A 233 75 H AlphaHelix -75.47 -35.93 11.2 5O5S ASG GLU A 234 76 H AlphaHelix -63.97 -1.27 76.5 5O5S ASG THR A 235 77 T Turn -144.15 50.99 114.3 5O5S ASG ASN A 236 78 T Turn -125.84 35.59 81.8 5O5S ASG ASN A 237 79 T Turn 47.70 47.25 117.1 5O5S ASG ARG A 238 80 T Turn -129.98 127.48 77.8 5O5S ASG SER A 239 81 C Coil -88.37 -28.04 83.9 5O5S ASG TYR A 240 82 E Strand -137.31 143.39 131.9 5O5S ASG LEU A 241 83 E Strand -121.48 111.65 0.4 5O5S ASG THR A 242 84 E Strand -110.49 120.03 5.4 5O5S ASG VAL A 243 85 E Strand -108.43 117.45 0.8 5O5S ASG ALA A 244 86 E Strand -108.97 129.21 0.0 5O5S ASG ILE A 245 87 E Strand -110.73 122.83 0.0 5O5S ASG GLY A 246 88 E Strand -118.73 134.09 0.0 5O5S ASG CYS A 247 89 E Strand -118.84 -166.80 5.2 5O5S ASG THR A 248 90 T Turn -71.84 -50.83 71.7 5O5S ASG GLY A 249 91 T Turn -101.88 -13.70 27.8 5O5S ASG GLY A 250 92 T Turn 76.41 25.04 0.0 5O5S ASG LYS A 251 93 C Coil -110.51 -33.39 70.7 5O5S ASG HIS A 252 94 H AlphaHelix -116.06 -78.01 23.9 5O5S ASG ARG A 253 95 H AlphaHelix -60.02 -51.60 14.8 5O5S ASG SER A 254 96 H AlphaHelix -62.99 -41.45 0.0 5O5S ASG VAL A 255 97 H AlphaHelix -56.93 -51.12 0.0 5O5S ASG TYR A 256 98 H AlphaHelix -59.68 -47.98 16.8 5O5S ASG ILE A 257 99 H AlphaHelix -64.67 -45.38 1.0 5O5S ASG ALA A 258 100 H AlphaHelix -57.66 -41.75 0.0 5O5S ASG GLU A 259 101 H AlphaHelix -59.51 -46.63 48.1 5O5S ASG GLN A 260 102 H AlphaHelix -67.30 -38.48 61.5 5O5S ASG LEU A 261 103 H AlphaHelix -63.97 -47.83 0.0 5O5S ASG ALA A 262 104 H AlphaHelix -56.61 -42.85 6.6 5O5S ASG ASP A 263 105 H AlphaHelix -64.84 -39.79 88.3 5O5S ASG TYR A 264 106 H AlphaHelix -62.16 -49.37 45.2 5O5S ASG PHE A 265 107 H AlphaHelix -69.39 -34.36 0.0 5O5S ASG ARG A 266 108 H AlphaHelix -55.30 -45.03 155.6 5O5S ASG SER A 267 109 H AlphaHelix -61.02 -23.01 65.8 5O5S ASG ARG A 268 110 H AlphaHelix -89.25 6.09 150.8 5O5S ASG GLY A 269 111 C Coil 82.25 11.54 69.7 5O5S ASG LYS A 270 112 C Coil -80.59 155.19 70.7 5O5S ASG ASN A 271 113 C Coil -77.28 119.02 84.0 5O5S ASG VAL A 272 114 E Strand -134.67 157.46 39.9 5O5S ASG GLN A 273 115 E Strand -150.59 145.49 121.7 5O5S ASG SER A 274 116 E Strand -114.98 154.61 56.0 5O5S ASG ARG A 275 117 E Strand -152.87 138.01 88.6 5O5S ASG HIS A 276 118 E Strand -118.08 101.36 22.0 5O5S ASG ARG A 277 119 T Turn -62.59 -37.88 61.7 5O5S ASG THR A 278 120 T Turn -76.97 -41.81 27.6 5O5S ASG LEU A 279 121 T Turn -66.70 -29.57 50.9 5O5S ASG GLU A 280 122 T Turn -71.43 -16.26 107.2 5O5S ASG LYS A 281 123 C Coil -85.84 360.00 155.9 5O5S