#my_colors
384B60
set_color dark_bg, [56, 75, 96]
FF7677
set_color red_ox, [255, 118, 119]
3483CA
set_color blue_nitro, [52, 131, 202]
C5E9EA
set_color blue_sky, [197, 233, 234]
F8F1E0
set_color vanilla_ice, [248, 241, 224]
1A2839
set_color darkest, [26, 40, 57]

#zadanie_1
fetch 5rew
select site, byres all within 5 of resn T4M
show sticks, site
color grey, all
set_color blue_sky, [197, 233, 234]
set_color red_ox, [255, 118, 119]
set_color blue_nitro, [52, 131, 202]
set_color vanilla_ice, [248, 241, 224]
color vanilla_ice, site
color blue_sky, resn T4M
color blue_nitro, name N*
color red_ox, name O*
hide cartoon, resi 17-33
set cartoon_transparency, 0.5
set ray_trace_mode, 1
set label_bg_color, white
set label_connector, 0
set label_bg_transparency, 0 

#zadanie_2
fetch 5yce
fetch 108m
fetch 5yce, type=2fofc
fetch 108m, type=2fofc
select 5_better_bb, 5yce and resi 122-125 and backbone
show sticks, 5_better_bb
select 1_worse_bb, 108m and resi 122-125 and backbone
show sticks, 1_worse_bb
isomesh 5yce_side, 5yce_2fofc, 1, 5_better_bb, carve=1
isomesh 108m_side, 108m_2fofc, 1, 1_worse_bb, carve=1.5
color black, 5yce_side
color black, 108m_side

#zadanie_3
fetch 5rew
fetch 5rew, type=2fofc
hide everything
show sticks, backbone
isomesh map1, 5rew_2fofc, 1, backbone, carve=1.2
isomesh map2, 5rew_2fofc, 2, backbone, carve=1
isomesh map3, 5rew_2fofc, 3, backbone, carve=1 

bg_color dark_bg
color black, map1
color black, map2
color black, map3
spectrum b, blue_nitro vanilla red_ox, maximum = 50

#zadanie_4
show sticks, resn T4M
isomesh lig1, 5rew_2fofc, 1, resn T4M, carve=2
isomesh lig2, 5rew_2fofc, 2, resn T4M, carve=2
isomesh lig3, 5rew_2fofc, 3, resn T4M, carve=2
color black, lig1
color white, lig2
color yellow, lig3
color blue_sky, resn T4M
color blue_nitro, name N*
color red_ox, name O*