Dataset and Motifs High-scoring Sequences Motif Diagrams Annotated Sequences Debugging Information


MAST - Motif Alignment and Search Tool

MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)

For further information on how to interpret these results or to get a copy of the MAST software please access http://meme.nbcr.net.


REFERENCE

If you use this program in your research, please cite:

Timothy L. Bailey and Michael Gribskov, "Combining evidence using p-values: application to sequence homology searches", Bioinformatics, 14(48-54), 1998.


DATABASE AND MOTIFS

	DATABASE ./ADK.fasta (peptide)
	Last updated on Fri May 10 16:53:16 2013
	Database contains 23 sequences, 4098 residues

	MOTIFS memeout/meme.txt (peptide)
	MOTIF WIDTH BEST POSSIBLE MATCH
	----- ----- -------------------
	  1    21   CKNGFILDGFPRTVPQAEWLD
	  2    21   IFLGPPGAGKGTQAPFIAEKY
	  3    29   ERITGRWVHPNCGRSYHVEFNPPKVPMKC

	PAIRWISE MOTIF CORRELATIONS:
	MOTIF     1     2
	----- ----- -----
	   2   0.11
	   3   0.10  0.16
	No overly similar pairs (correlation > 0.60) found.

	Random model letter frequencies (from non-redundant database):
	A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058 
	L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064 
	W 0.013 Y 0.033 

SECTION I: HIGH-SCORING SEQUENCES

LinksSequence NameDescriptionE-valueLength
D A ?
KAD1_YEAST/11-198 5.1e-44 188
D A ?
KAD2_BOVIN/22-208 3.6e-43 187
D A ?
KAD1_SCHPO/8-195 5.9e-43 188
D A ?
KAD1_ORYSJ/33-219 4.4e-42 187
D A ?
KAD_HAEIN/5-187 5.2e-39 183
D A ?
KAD_ECOLI/5-187 1.5e-38 183
D A ?
KAD_BACSU/5-191 4.5e-38 187
D A ?
KAD_GEOSE/5-191 1.1e-37 187
D A ?
KAD2_CAEEL/31-217 4.5e-30 187
D A ?
KAD3_BOVIN/12-192 4.6e-30 181
D A ?
KAD_BORPE/5-187 7.1e-30 183
D A ?
KAD_LACLC/5-193 3.8e-27 189
D A ?
KAD4_HUMAN/10-190 3.6e-24 181
D A ?
KAD_PARDE/7-192 7.5e-23 186
D A ?
KAD_MYCCT/5-189 3.5e-21 185
D A ?
KADC_MAIZE/10-189 8.2e-17 180
D A ?
KAD_STRCO/5-192 2.4e-16 188
D A ?
KAD_MICLU/6-165 2.8e-09 160
D A ?
KAD1_CYPCA/13-169 1.5e-07 157
D A ?
KAD1_BOVIN/13-169 1.8e-06 157
D A ?
UMPK_YEAST/21-179 0.00039 159
D A ?
KCY_DICDI/12-169 0.88 158
D A ?
KAD_SCHMA/14-170 3.4 157

SECTION II: MOTIF DIAGRAMS


LinksNameExpect   Motifs
S A ?
KAD1_YEAST/11-198 5.1e-44

1
3
S A ?
KAD2_BOVIN/22-208 3.6e-43

1
3
S A ?
KAD1_SCHPO/8-195 5.9e-43

1
3
S A ?
KAD1_ORYSJ/33-219 4.4e-42

1
3
S A ?
KAD_HAEIN/5-187 5.2e-39

1
3
S A ?
KAD_ECOLI/5-187 1.5e-38

1
3
S A ?
KAD_BACSU/5-191 4.5e-38

1
3
S A ?
KAD_GEOSE/5-191 1.1e-37

1
3
S A ?
KAD2_CAEEL/31-217 4.5e-30

1
3
S A ?
KAD3_BOVIN/12-192 4.6e-30

1
3
S A ?
KAD_BORPE/5-187 7.1e-30

1
3
S A ?
KAD_LACLC/5-193 3.8e-27

1
3
S A ?
KAD4_HUMAN/10-190 3.6e-24

1
3
S A ?
KAD_PARDE/7-192 7.5e-23

1
3
S A ?
KAD_MYCCT/5-189 3.5e-21

1
3
S A ?
KADC_MAIZE/10-189 8.2e-17

1
3
S A ?
KAD_STRCO/5-192 2.4e-16

1
3
S A ?
KAD_MICLU/6-165 2.8e-09

1
S A ?
KAD1_CYPCA/13-169 1.5e-07

1
S A ?
KAD1_BOVIN/13-169 1.8e-06

1
S A ?
UMPK_YEAST/21-179 0.00039

1
S A ?
KCY_DICDI/12-169 0.88

1
S A ?
KAD_SCHMA/14-170 3.4

SCALE
| | | | | | | |
1 25 50 75 100 125 150 175

SECTION III: ANNOTATED SEQUENCES


KAD1_YEAST/11-198
S D ?


LENGTH = 188 COMBINED P-VALUE = 2.21e-45 E-VALUE = 5.1e-44
DIAGRAM: 73-[1]-24-[3]-41
                                                                              [1
                                                                              1.
                                                                              CK
                                                                              ++
1    LIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACK

     ]                                          [3]
     6e-25                                      4.4e-28
     NGFILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     +++++++++++++++++++                         ++++++++++++++++++++++++++++
76   NGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVT



KAD2_BOVIN/22-208
S D ?


LENGTH = 187 COMBINED P-VALUE = 1.55e-44 E-VALUE = 3.6e-43
DIAGRAM: 72-[1]-24-[3]-41
                                                                             [1]
                                                                             1.2
                                                                             CKN
                                                                             +++
1    LLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVLELIEKNLETPPCKN

                                               [3]
     e-23                                      7.6e-29
     GFILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     +++++++++++ ++++++                        ++++++++++ ++++++++++++++++++
76   GFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPQSGRSYHEEFNPPKEPMKDDITG



KAD1_SCHPO/8-195
S D ?


LENGTH = 188 COMBINED P-VALUE = 2.58e-44 E-VALUE = 5.9e-43
DIAGRAM: 73-[1]-24-[3]-41
                                                                              [1
                                                                              7.
                                                                              CK
                                                                              ++
1    LVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARQTELGKEAKKIMDQGGLVSDDIVTGMIKDEILNNPECK

     ]                                          [3]
     6e-24                                      1.9e-28
     NGFILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     +++++++++++++++++++                        ++++++++++ ++++++ +++++++++++
76   NGFILDGFPRTVVQAEKLTALLDELKLDLNTVLELQVDDELLVRRITGRLVHPGSGRSYHLEFNPPKVPMKDDVT



KAD1_ORYSJ/33-219
S D ?


LENGTH = 187 COMBINED P-VALUE = 1.89e-43 E-VALUE = 4.4e-42
DIAGRAM: 72-[1]-24-[3]-41
                                                                             [1]
                                                                             6.0
                                                                             CKN
                                                                             +++
1    LVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKTSCQK

                                               [3]
     e-23                                      1.9e-28
     GFILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++++++++++                        +++++++++++++++++++++++++++ +
76   GFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILEERITGRWIHPSSGRSYHTKFAPPKTPGLDDVTG



KAD_HAEIN/5-187
S D ?


LENGTH = 183 COMBINED P-VALUE = 2.27e-40 E-VALUE = 5.2e-39
DIAGRAM: 72-[1]-20-[3]-41
                                                                             [1]
                                                                             5.1
                                                                             CKN
                                                                             + +
1    LLGAPGAGKGTQAQFIMNKFGIPQISTGDMFRAAIKAGTELGKQAKALMDEGKLVPDELTVALVKDRIAQADCTN

                                           [3]
     e-21                                  6.2e-28
     GFILDGFPRTVPQAEWLD                    ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++++++++++                    +++++++++ +++++++++++++++++++
76   GFLLDGFPRTIPQADALKDSGVKIDFVLEFDVPDEVIVERMSGRRVHQASGRSYHIVYNPPKVEGKDDVTGEDLI



KAD_ECOLI/5-187
S D ?


LENGTH = 183 COMBINED P-VALUE = 6.74e-40 E-VALUE = 1.5e-38
DIAGRAM: 72-[1]-20-[3]-41
                                                                             [1]
                                                                             3.2
                                                                             CKN
                                                                             +++
1    LLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRN

                                           [3]
     e-21                                  7.8e-27
     GFILDGFPRTVPQAEWLD                    ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++++++++++                    +++ +++++++++++++++++++++++++
76   GFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELT



KAD_BACSU/5-191
S D ?


LENGTH = 187 COMBINED P-VALUE = 1.98e-39 E-VALUE = 4.5e-38
DIAGRAM: 72-[1]-24-[3]-41
                                                                             [1]
                                                                             7.4
                                                                             CKN
                                                                             +++
1    LMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCER

                                               [3]
     e-22                                      3.3e-26
     GFILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++++++++++                        ++++++++++ ++ +++ +++++++++++
76   GFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDG



KAD_GEOSE/5-191
S D ?


LENGTH = 187 COMBINED P-VALUE = 4.60e-39 E-VALUE = 1.1e-37
DIAGRAM: 72-[1]-24-[3]-41
                                                                             [1]
                                                                             4.0
                                                                             CKN
                                                                             +++
1    LMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQN

                                               [3]
     e-23                                      1.0e-24
     GFILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++++++++++                        +++++++++ +++++++ +++++ +++++
76   GFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCG



KAD2_CAEEL/31-217
S D ?


LENGTH = 187 COMBINED P-VALUE = 1.95e-31 E-VALUE = 4.5e-30
DIAGRAM: 72-[1]-24-[3]-41
                                                                             [1]
                                                                             3.5
                                                                             CKN
                                                                             ++
1    FIGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGKLVSDEVVCKLIEQKLEKPECKY

                                               [3]
     e-17                                      2.3e-22
     GFILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++  ++++++                        +++++++ + +++++++ ++ ++++++++
76   GFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRITGRLFHIASGRSYHLEFKPPKVPMKDDLTG



KAD3_BOVIN/12-192
S D ?


LENGTH = 181 COMBINED P-VALUE = 2.00e-31 E-VALUE = 4.6e-30
DIAGRAM: 71-[1]-19-[3]-41
                                                                            [1]
                                                                            9.1e
                                                                            CKNG
                                                                             +
1    IMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDDVMTRLVLHELKNLTQYN

                                         [3]
     -16                                 5.8e-24
     FILDGFPRTVPQAEWLD                   ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     +++++++++++++++++                    +++ +++++ ++++++++++++++ +++
76   WLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTARWIHPGSGRVYNIEFNPPKTMGIDDLTGEPLVQR



KAD_BORPE/5-187
S D ?


LENGTH = 183 COMBINED P-VALUE = 3.09e-31 E-VALUE = 7.1e-30
DIAGRAM: 72-[1]-20-[3]-41
                                                                             [1]
                                                                             4.3
                                                                             CKN
                                                                             +++
1    LLGPPGAGKGTQAAFLTQHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGGLVSDDLIIGLVRDRLTQPDCAN

                                           [3]
     e-21                                  1.0e-18
     GFILDGFPRTVPQAEWLD                    ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++++++++++                    ++++ +++++++++++++ +++++ ++++
76   GYLFDGFPRTIPQADALKSAGIALDYVVEIEVPESDIIERMSERRVHPASGRSYHVRFNPPKAEGVDDVTGEPLV



KAD_LACLC/5-193
S D ?


LENGTH = 189 COMBINED P-VALUE = 1.65e-28 E-VALUE = 3.8e-27
DIAGRAM: 73-[1]-24-[3]-42
                                                                              [1
                                                                              1.
                                                                              CK
                                                                               +
1    IMGLPGAGKGTQAEFIVKNYGVNHISTGDMFRAAMKNETEMGKLAKSFIDKGELVPDEVTNGIVKERLAQDDIKA

     ]                                          [3]
     2e-14                                      2.8e-22
     NGFILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
      +++++++++++ ++ +++                        +++++++++ ++++++++++++ ++++++
76   SGFLLDGYPRTIDQAHALDTMLEELGIKLDAVVNIVVNPNILVDRLSGRYICRNCGATYHKIFNPTKVEGTCDVC



KAD4_HUMAN/10-190
S D ?


LENGTH = 181 COMBINED P-VALUE = 1.58e-25 E-VALUE = 3.6e-24
DIAGRAM: 71-[1]-19-[3]-41
                                                                            [1]
                                                                            2.6e
                                                                            CKNG
     
1    ILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHVITRLMMSELENRRGQH

                                         [3]
     -14                                 3.7e-19
     FILDGFPRTVPQAEWLD                   ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++ ++++++                   ++++ ++++++++++++  ++++ +++++
76   WLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQ



KAD_PARDE/7-192
S D ?


LENGTH = 186 COMBINED P-VALUE = 3.26e-24 E-VALUE = 7.5e-23
DIAGRAM: 70-[1]-24-[3]-42
                                                                           [1]
                                                                           2.0e-
                                                                           CKNGF
                                                                             +++
1    LLGPPGAGKGTQARRLIDERGLVQLSTGDMLREARSSGTEMGKRVAEVMDRGELVTDEIVIGLIREKLGQGGKGF

                                             [3]
     15                                      4.8e-17
     ILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     +++++++++++++++                         ++++++ ++ +++ +++ +  + ++++++
76   IFDGFPRTLAQADALQALMAEMDQRIDAVIEMRVDDAALVSRISGRFTCGNCGEVYHDVTKPTKEPGKCDVCGST



KAD_MYCCT/5-189
S D ?


LENGTH = 185 COMBINED P-VALUE = 1.54e-22 E-VALUE = 3.5e-21
DIAGRAM: 70-[1]-24-[3]-41
                                                                           [1]
                                                                           5.3e-
                                                                           CKNGF
                                                                             +
1    LLGAPGCGKGTQAEQLVNKLNFIQVSTGDLMRKEISLNTTLGLKCQEYMNAGKYVPDQIVNQIVNQFLQYNNDKL

                                             [3]
     14                                      4.2e-16
     ILDGFPRTVPQAEWLD                        ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     ++++++++++++  ++                        ++++ +++++ + ++++ +   +++++ +
76   IFDGYPRTLEQAKSLEKMLDLYNKKIDYVFYIDVNEQILIKRITNRLVCPLCKASFNLETRKPKQEGLCDFDNTK



KADC_MAIZE/10-189
S D ?


LENGTH = 180 COMBINED P-VALUE = 3.58e-18 E-VALUE = 8.2e-17
DIAGRAM: 73-[1]-20-[3]-37
                                                                              [1
                                                                              5.
                                                                              CK
                                                                               +
1    ISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQE

     ]                                      [3]
     7e-11                                  8.4e-15
     NGFILDGFPRTVPQAEWLD                    ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     +++++++++++  ++ +++                    ++  +++  +  + +++ +++++ ++ +
76   NGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQRF



KAD_STRCO/5-192
S D ?


LENGTH = 188 COMBINED P-VALUE = 1.05e-17 E-VALUE = 2.4e-16
DIAGRAM: 72-[1]-25-[3]-41
                                                                             [1]
                                                                             1.6
                                                                             CKN
                                                                              +
1    LVGPPGAGKGTQATRLAETLHIPHISTGDLFRANISQQTELGKLAKSYMNAGNLVPDEVTIAMAKDRMEQPDAEG

                                                [3]
     e-18                                       4.5e-06
     GFILDGFPRTVPQAEWLD                         ERITGRWVHPNCGRSYHVEFNPPKVPMKC
     +++++++++++ ++++++                         +    +        ++++++ ++++++++
76   GFLLDGFPRNVSQAEALDELLETEGMKLDAVLDLEAPEDEVVKRIAGRRVCRNEPKHVFHVTYTPPKKEGVCDVC



KAD_MICLU/6-165
S D ?


LENGTH = 160 COMBINED P-VALUE = 1.22e-10 E-VALUE = 2.8e-09
DIAGRAM: 72-[1]-67
                                                                             [1]
                                                                             6.8
                                                                             CKN
                                                                              +
1    LMGPPGSGKGTQATRIADKLGIVPISTGDIFRHNVKSMTPLGVEAKRYIDNGDFVPDEVTNRMVADRIAQADAEH

     
     e-14
     GFILDGFPRTVPQAEWLD
     ++++++++++  + ++++
76   GFLLDGYPRTKGQVEALDAMLAEAGQSLSAVVELEVPDEELVERLLKRAEIEGRADDTQEVIEHRLDLYHRETES



KAD1_CYPCA/13-169
S D ?


LENGTH = 157 COMBINED P-VALUE = 6.47e-09 E-VALUE = 1.5e-07
DIAGRAM: 73-[1]-63
                                                                              [1
                                                                              3.
                                                                              CK
                                                                               +
1    VVGGPGSGKGTQCEKIVEKYGYTHLSSGDLLRAEVASGSERGKQLQAIMQKGELVPLDTVLDMIKDAMIAKADVS

     ]
     4e-12
     NGFILDGFPRTVPQAEWLD
     ++++ +++++ + + + ++
76   KGYLIDGYPREVKQGEEFEKKIGAPALLLYIDAKAETMVQRLMKRGQTSGRSDDNEETIKKRLDLYYKATEPVIA



KAD1_BOVIN/13-169
S D ?


LENGTH = 157 COMBINED P-VALUE = 7.72e-08 E-VALUE = 1.8e-06
DIAGRAM: 73-[1]-63
                                                                              [1
                                                                              4.
                                                                              CK
                                                                               +
1    VVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETVLDMLRDAMVAKVDTS

     ]
     3e-11
     NGFILDGFPRTVPQAEWLD
     ++++ +++++ + + + ++
76   KGFLIDGYPREVQQGEEFERRIAQPTLLLYVDAGPETMTKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIA



UMPK_YEAST/21-179
S D ?


LENGTH = 159 COMBINED P-VALUE = 1.68e-05 E-VALUE = 0.00039
DIAGRAM: 75-[1]-63

     [1]
     5.1e-09
     CKNGFILDGFPRTVPQAEWLD
      +  ++ +++++   ++  ++
76   NKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPV



KCY_DICDI/12-169
S D ?


LENGTH = 158 COMBINED P-VALUE = 3.82e-02 E-VALUE = 0.88
DIAGRAM: 71-[1]-66
                                                                            [1]
                                                                            8.1e
                                                                            CKNG
                                                                              +
1    VLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDANQGKN

     
     -05
     FILDGFPRTVPQAEWLD
     ++ ++++++ +     +
76   FLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVI



KAD_SCHMA/14-170
S D ?


LENGTH = 157 COMBINED P-VALUE = 1.48e-01 E-VALUE = 3.4
DIAGRAM: 157



Debugging Information




CPU: kodomo.fbb.msu.ru
Time 0.004000 secs.

mast memeout/meme.txt -d ./ADK.fasta -ev 10.000000 -mt 0.000100

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E
Links to Entrez database at NCBI
S
Links to sequence scores (section I)
D
Links to motif diagrams (section II)
A
Links to sequence/motif annotated alignments (section III)
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