FastQCFastQC Report
Вт 21 ноя 2017
trimmed.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenametrimmed.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4064
Sequences flagged as poor quality0
Sequence length50-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATATAGCTATGTATCAGCATCCTAATGATTCTCTCTTCACAAGTCACCT70.17224409448818898No Hit
ACTGTGTACCCATGGAGCCTACTGTCACATCATCTCATTAATGTTGGATG60.14763779527559054No Hit
ACATACAGCGAGAACAGCAGGAGCTCAAGGAACAGGATCAAGAAACCATG50.12303149606299213No Hit
CATCCTAATGATTCTCTCTTCACAAGTCACCTCCAGCTGATGATTCCCAG50.12303149606299213No Hit
AGCTGAATTTCAATATGCTGAAACCGTATTTCGAGATAAGTCTGGTCGTA50.12303149606299213No Hit
AAAAAACAGTATGAGCCTAAATTGGTCTCTGCACTTTCATATTTTTACCT50.12303149606299213No Hit
ACTCCCAGCCTTCGCCTTCATCCAATACTAATAAATAACCTACAGAAAGA50.12303149606299213No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)