UniProt searching

Task 1. General Information

There is only one protein in UniProtKB that i found using my CDS ID and its status is "unreviewed".
This table can show you the most important general information about my protein.
Unfortunately, I couldn't find any information about PDB ID .
Uniprot ID
A0A0U3POF8_9LACT
Uniprot AC
A0A0U3POF8
Refseq ID
WP_058919525.1
PDB ID
not found
Length [AA]
349
MW [Da]
38734
Name
FAD:protein FMN transferase
Alternative name
Flavin transferase

Task 2. UniRef protein clusters

The service UniRef gave me 3 results:
Claster ID
Size
Claster members
Groups of organisms
Identity
UniRef50_K0N3C5
1
A0A0U3P0F8 and 335
Bacillus, Carnobacterium, Enterococcus, Lacticigenium, Lactobacillus, Listeria, Mycobacterium, Streptococcus
50%
UniRef90_A0A0U3P0F8
1
A0A0U3P0F8
Carnobacterium sp. CP1
90%
UniRef100_A0A0U3P0F8
1
A0A0U3P0F8
Carnobacterium sp. CP1
100%

Task 3. UniProt search sessions

Characteristic
Entry
Amount of proteins
Reviewed (SwissProt)
Recomended Name
"fad protein fmn transferase"
12143
14
Recomended Name in phylum
name:"fad protein fmn transferase" taxonomy:firmicutes
3158
0
Recomended Name in family
name:"fad protein fmn transferase" taxonomy:"Carnobacteriaceae"
40
0
Recomended Name in organism
name:"fad protein fmn transferase" organism:"Carnobacterium sp. CP1 [1564681]"
2
0
Next table is not about my protein. It's an illustration of how we can use this kind of searching.
 
Without
Metazoa
Vertebrata
Arthropoda
Viridiplantae
Fungi
Phaeophyceae
Ciliophora
ehemoglobin
entry:name:hemoglobin Amount of proteins:11557 Reviewed:944
entry:name:hemoglobin taxonomy:metazoa Amount of proteins:3593 Reviewed:838
entry:name:hemoglobin taxonomy:vertebrata Amount of proteins:2659 Reviewed:821
entry:name:hemoglobin taxonomy:arthropoda Amount of proteins:757 Reviewed:0
entry:name:hemoglobin taxonomy:viridiplantae Amount of proteins:207 Reviewed:25
entry:name:hemoglobin taxonomy:fungi Amount of proteins:38 Reviewed:5
entry:name:hemoglobin taxonomy:phaeophyceae Amount of proteins:1 Reviewed:0
entry:name:hemoglobin taxonomy:ciliophora Amount of proteins:18 Reviewed:3
albumin
entry:name:albumin Amount of proteins:778 Reviewed:76
entry:name:albumin taxonomy:metazoa Amount of proteins:291 Reviewed:42
entry:name:albumin taxonomy:vertebrata Amount of proteins:285 Reviewed:42
entry:name:albumin taxonomy:arthropoda Amount of proteins:1 Reviewed:0
entry:name:albumin taxonomy:viridiplantae Amount of proteins:464 Reviewed:33
entry:name:albumin taxonomy:fungi Amount of proteins:2 Reviewed:0
entry:name:albumin taxonomy:phaeophyceae Amount of proteins:0 Reviewed:0
entry:name:albumin taxonomy:ciliophora Amount of proteins:0 Reviewed:0
The last table is focused on trypsin and its inhibitors.
Entry
Amount of proteins
Reviewed (SwissProt)
Trypsin
name:trypsin
14914
310
Trypsin inhibitors
Ename:trypsin name:inhibitor
3189
209
© Григорьева Маша