В таблице вы видите данные,
которые я получил с помощью PROSITE, когда искал мотивы в белке GLPK_ECOLI
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Идентификатор документа PROSITE (AC)
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Название мотива
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Краткое описание мотива
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Тип подписи (паттерн, профиль)
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Паттерн (регулярное выражение)
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Специфична ли подпись?
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Сколько мотивов нашлось в белке?
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PS00933
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FGGY_KINASES_1
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FGGY family of
carbohydrate kinases signature 1
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паттерн
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[MFYGS] - x - [PST] - x(2) - K - [LIVMFYW] - {G} - W - [LIVMF]
- {E} - [DENQTKR] - [ENQH]
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специфична
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5
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PS00445
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FGGY_KINASES_2
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FGGY family of
carbohydrate kinases signature 2
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паттерн
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[GSA] - x - [LIVMFYW] - {D} - G - [LIVM] - x(7,8) - [HDENQ] -
[LIVMF] - {PEQ} - {DTAI} - [AS] - [STALIVM] - [LIVMFY] - [DEQ]
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специфична
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20
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PS00005
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PKC_PHOSPHO_SITE
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Protein kinase_C
phosphorylation site
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паттерн
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[ST] - x - [RK] S or
T is the phosphorylation site
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неспецифична
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-
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PS00008
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MYRISTYL
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N-myristoylation
site
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паттерн
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G - {EDRKHPFYW} -
x(2) - [STAGCN] - {P} [G is the N - myristoylation site]
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неспецифична
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-
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PS00006
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CK2_PHOSPHO_SITE
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Casein kinase II
phosphorylation site
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паттерн
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[ST] - x(2) - [DE]
[S or T is the phosphorylation site]
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неспецифична
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-
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PS00007
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TYR_PHOSPHO_SITE
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Tyrosine kinase
phosphorylation site
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паттерн
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[RK] - x(2) - [DE] -
x(3) - Y or [RK] - x(3) - [DE] - x(2) - Y Y is the phosphorylation site
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неспецифична
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-
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PS00003
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SULFATION
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Tyrosine sulfation
site
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правило
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-
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-
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-
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PS00001
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ASN_GLYCOSYLATION
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N-glycosylation site
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паттерн
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N - {P} - [ST] - {P} N is the glycosylation site
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неспецифична
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-
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PS00004
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CAMP_PHOSPHO_SITE
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cAMP- and
cGMP-dependent protein kinase phosphorylation site
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паттерн
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[RK](2) - x - [ST] S
or T is the phosphorylation site
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неспецифична
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-
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