RID: 789X5SKB013 Job Title:RNA-binding phosphoprotein p12 Program: BLASTP Query: RNA-binding phosphoprotein p12 ID: lcl|Query_84500(amino acid) Length: 263 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Radiation mu... NA 11787 442 442 81% 6e-154 100.00 537 P11269.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Murine leuke... NA 31687 430 430 81% 2e-149 98.14 537 P29167.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Murine leuke... NA 31688 430 430 81% 3e-149 98.14 536 P29168.3 RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Co... Xenotropic M... NA 373193 425 425 81% 4e-147 96.28 536 Q27ID9.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... AKR (endogen... NA 11791 424 424 81% 6e-147 96.28 537 P03336.3 RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Co... Xenotropic M... NA 356664 422 422 81% 7e-146 95.81 536 Q2F7I9.1 RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Co... Xenotropic M... NA 356663 421 421 81% 7e-146 95.81 536 Q2F7J2.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Duplan murin... NA 11794 421 421 81% 8e-146 95.81 529 P23090.3 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... AKR (endogen... NA 11791 424 424 81% 1e-145 96.28 625 P0DOG8.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... HoMuLV murin... NA 11799 421 421 81% 1e-145 94.88 540 P21435.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Cas-Br-E mur... NA 11792 416 416 81% 2e-143 94.88 536 P27460.3 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Radiation mu... NA 11787 443 443 81% 3e-143 100.00 1734 P11227.2 RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Co... Moloney muri... NA 928306 415 415 81% 4e-143 94.42 538 P03332.4 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Cas-Br-E mur... NA 11792 416 416 81% 3e-142 94.88 624 P0DOH4.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Friend murin... NA 11798 411 411 81% 1e-141 93.49 538 P26805.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Moloney muri... NA 11809 410 410 81% 1e-141 92.56 538 P03334.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Moloney muri... NA 31691 408 408 81% 2e-141 92.09 468 P32594.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Friend murin... NA 11797 409 409 81% 9e-141 93.02 538 P26806.3 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Friend murin... NA 11798 411 411 81% 1e-140 93.49 626 P0DOH6.1 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Moloney muri... NA 882209 411 411 81% 1e-140 93.02 626 Q8UN02.2 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Friend murin... NA 11796 407 407 81% 3e-140 92.56 539 P26807.3 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Friend murin... NA 11797 409 409 81% 1e-139 93.02 626 P0DOH5.1 RecName: Full=Gag-pol polyprotein; Contains: RecName:... Murine leuke... NA 31687 431 431 81% 6e-139 98.14 1734 Q7SVK7.2 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Friend murin... NA 11796 407 407 81% 8e-139 92.56 627 P0DOH0.1 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Xenotropic M... NA 373193 426 426 81% 4e-137 96.28 1733 A1Z651.1 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... AKR (endogen... NA 11791 425 425 81% 1e-136 96.28 1734 P03356.3 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Xenotropic M... NA 356664 424 424 81% 3e-136 95.81 1733 Q2F7J0.1 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Xenotropic M... NA 356663 423 423 81% 5e-136 95.81 1733 Q2F7J3.1 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Cas-Br-E mur... NA 11792 418 418 81% 4e-134 94.88 1733 P08361.2 RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contain... Moloney muri... NA 928306 417 417 81% 1e-133 94.42 1738 P03355.5 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Friend murin... NA 11798 414 414 81% 1e-132 93.49 1738 P26808.2 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Friend murin... NA 11797 411 411 81% 1e-131 93.02 1738 P26809.2 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Friend murin... NA 11796 410 410 81% 4e-131 92.56 1739 P26810.2 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Feline leuke... NA 11768 315 315 81% 2e-104 70.70 506 P10262.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Feline sarco... NA 11778 312 312 81% 5e-104 70.23 459 P03340.2 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Feline leuke... NA 11768 316 316 81% 7e-104 70.70 580 P0DOH3.1 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Feline sarco... NA 11778 313 313 81% 3e-103 70.23 536 P0DOH2.1 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Feline leuke... NA 11768 316 316 81% 1e-97 70.70 1712 P10273.2 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Woolly monke... NA 11970 288 288 78% 1e-93 65.05 521 P03330.4 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Gibbon ape l... NA 11840 286 286 78% 7e-93 64.56 520 P21416.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Koala retrov... NA 394239 285 285 78% 9e-93 64.56 521 Q9TTC2.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Baboon endog... NA 11764 282 282 81% 3e-91 64.65 537 P03341.4 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Woolly monke... NA 11970 289 289 78% 2e-88 65.05 1687 P03359.2 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Gibbon ape l... NA 11840 287 287 78% 1e-87 64.56 1686 P21414.2 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr125Pol;... Koala retrov... NA 394239 286 286 78% 2e-87 64.56 1687 Q9TTC1.2 RecName: Full=Gag-Pol polyprotein; Contains: RecName:... Baboon endog... NA 11764 283 283 81% 3e-86 64.65 1727 P10272.2 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Gardner-Arns... NA 11774 226 226 57% 1e-71 70.20 348 P03337.2 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Gardner-Arns... NA 11774 226 226 57% 7e-71 70.20 425 P0DOH1.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Feline sarco... NA 11777 218 218 54% 2e-68 71.33 340 P04322.2 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Feline sarco... NA 11777 218 218 54% 1e-67 71.33 414 P0DP83.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Finkel-Biski... NA 353765 189 189 41% 7e-58 85.45 310 P29175.3 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Snyder-Theil... NA 11780 157 157 37% 2e-45 73.74 297 P03338.2 RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell... Snyder-Theil... NA 11780 157 157 37% 1e-44 73.74 371 P0DOG9.1 RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein;... Avian spleen... NA 11899 114 114 38% 6e-29 52.94 313 P03342.1 RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix... Abelson muri... NA 11788 44.7 44.7 7% 3e-04 95.00 235 P03333.3 Alignments: >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Radiation murine leukemia virus] Sequence ID: P11269.3 Length: 537 Range 1: 215 to 429 Score:442 bits(1137), Expect:6e-154, Method:Compositional matrix adjust., Identities:215/215(100%), Positives:215/215(100%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 215 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 274 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ Sbjct 275 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 334 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM Sbjct 335 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 394 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI Sbjct 395 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 429 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Murine leukemia virus (strain BM5 ECO)] Sequence ID: P29167.3 Length: 537 Range 1: 215 to 429 Score:430 bits(1106), Expect:2e-149, Method:Compositional matrix adjust., Identities:211/215(98%), Positives:212/215(98%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 215 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 274 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ Sbjct 275 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 334 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 335 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 394 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAP IGRKLERLEDLKSKTL DLVREAEKI Sbjct 395 SFIWQSAPAIGRKLERLEDLKSKTLGDLVREAEKI 429 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [Murine leukemia virus (strain DEF27)] Sequence ID: P29168.3 Length: 536 Range 1: 214 to 428 Score:430 bits(1106), Expect:3e-149, Method:Compositional matrix adjust., Identities:211/215(98%), Positives:213/215(99%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 214 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGP+ESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPSESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [Xenotropic MuLV-related virus VP62] Sequence ID: Q27ID9.1 Length: 536 Range 1: 214 to 428 Score:425 bits(1092), Expect:4e-147, Method:Compositional matrix adjust., Identities:207/215(96%), Positives:211/215(98%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR+GG+GQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 214 PLRMGGDGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVN+AFPLERPDWDYTT EGRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNAAFPLERPDWDYTTTEGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [AKR (endogenous) murine leukemia virus] Sequence ID: P03336.3 Length: 537 Range 1: 215 to 429 Score:424 bits(1090), Expect:6e-147, Method:Compositional matrix adjust., Identities:207/215(96%), Positives:211/215(98%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 215 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 274 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEV++AFPLERPDWDYTT GRNHLVLYRQ Sbjct 275 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVDAAFPLERPDWDYTTQRGRNHLVLYRQ 334 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 335 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 394 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAE+I Sbjct 395 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAERI 429 >RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [Xenotropic MuLV-related virus VP42] Sequence ID: Q2F7I9.1 Length: 536 Range 1: 214 to 428 Score:422 bits(1084), Expect:7e-146, Method:Compositional matrix adjust., Identities:206/215(96%), Positives:210/215(97%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR+GG+GQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 214 PLRMGGDGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVN+AFPLERPDW YTT EGRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNAAFPLERPDWGYTTTEGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [Xenotropic MuLV-related virus VP35] Sequence ID: Q2F7J2.1 Length: 536 Range 1: 214 to 428 Score:421 bits(1083), Expect:7e-146, Method:Compositional matrix adjust., Identities:206/215(96%), Positives:210/215(97%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR+GG+GQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 214 PLRMGGDGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEA KAVRGNDGRPTQLPNEVN+AFPLERPDWDYTT EGRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEAGKAVRGNDGRPTQLPNEVNAAFPLERPDWDYTTTEGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [Duplan murine leukemia virus] Sequence ID: P23090.3 Length: 529 Range 1: 207 to 421 Score:421 bits(1083), Expect:8e-146, Method:Compositional matrix adjust., Identities:206/215(96%), Positives:211/215(98%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR+GG+GQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 207 PLRMGGDGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 266 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDW+Y+TPEGRNHLVLYRQ Sbjct 267 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWNYSTPEGRNHLVLYRQ 326 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGL NAGRSPTNLAKVK ITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 327 LLLAGLHNAGRSPTNLAKVKRITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 386 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 387 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 421 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [AKR (endogenous) murine leukemia virus] Sequence ID: P0DOG8.1 Length: 625 Range 1: 303 to 517 Score:424 bits(1090), Expect:1e-145, Method:Compositional matrix adjust., Identities:207/215(96%), Positives:211/215(98%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 303 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 362 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEV++AFPLERPDWDYTT GRNHLVLYRQ Sbjct 363 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVDAAFPLERPDWDYTTQRGRNHLVLYRQ 422 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 423 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 482 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAE+I Sbjct 483 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAERI 517 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [HoMuLV murine leukemia virus] Sequence ID: P21435.3 Length: 540 Range 1: 218 to 432 Score:421 bits(1082), Expect:1e-145, Method:Compositional matrix adjust., Identities:204/215(95%), Positives:209/215(97%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSS+DLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 218 PLRTGGNGQLQYWPFSSADLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 277 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNE+N AFPLERPDWDYTTP GRNHLVLYRQ Sbjct 278 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEINDAFPLERPDWDYTTPAGRNHLVLYRQ 337 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQ+AGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 338 LLLAGLQHAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 397 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAE+I Sbjct 398 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAERI 432 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Cas-Br-E murine leukemia virus] Sequence ID: P27460.3 Length: 536 Range 1: 214 to 428 Score:416 bits(1068), Expect:2e-143, Method:Compositional matrix adjust., Identities:204/215(95%), Positives:206/215(95%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 214 PLRSGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLLTHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPNE+N AFPLERPDWDY T GRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNEINDAFPLERPDWDYNTQRGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Radiation murine leukemia virus] Sequence ID: P11227.2 Length: 1734 Range 1: 215 to 429 Score:443 bits(1139), Expect:3e-143, Method:Compositional matrix adjust., Identities:215/215(100%), Positives:215/215(100%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 215 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 274 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ Sbjct 275 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 334 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM Sbjct 335 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 394 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI Sbjct 395 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 429 >RecName: Full=Gag polyprotein; Short=Pr65gag; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Moloney murine leukemia virus isolate Shinnick] Sequence ID: P03332.4 Length: 538 Range 1: 216 to 430 Score:415 bits(1066), Expect:4e-143, Method:Compositional matrix adjust., Identities:203/215(94%), Positives:208/215(96%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 216 PLRAGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 275 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG+DGRPTQLPNEV++AFPLERPDWDYTT GRNHLV YRQ Sbjct 276 TLLTGEEKQRVLLEARKAVRGDDGRPTQLPNEVDAAFPLERPDWDYTTQAGRNHLVHYRQ 335 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 336 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 395 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLK+KTL DLVREAEKI Sbjct 396 SFIWQSAPDIGRKLERLEDLKNKTLGDLVREAEKI 430 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Cas-Br-E murine leukemia virus] Sequence ID: P0DOH4.1 Length: 624 Range 1: 302 to 516 Score:416 bits(1068), Expect:3e-142, Method:Compositional matrix adjust., Identities:204/215(95%), Positives:206/215(95%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 302 PLRSGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLLTHQPTWDDCQQLLG 361 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPNE+N AFPLERPDWDY T GRNHLVLYRQ Sbjct 362 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNEINDAFPLERPDWDYNTQRGRNHLVLYRQ 421 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 422 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 481 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 482 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 516 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Friend murine leukemia virus (ISOLATE PVC-211)] Sequence ID: P26805.3 Length: 538 Range 1: 216 to 430 Score:411 bits(1056), Expect:1e-141, Method:Compositional matrix adjust., Identities:201/215(93%), Positives:205/215(95%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQ QYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 216 PLRLGGNGQFQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLLTHQPTWDDCQQLLG 275 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 276 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 335 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 336 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 395 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLK+KTL DLVREAEKI Sbjct 396 SFIWQSAPDIGRKLERLEDLKNKTLGDLVREAEKI 430 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [Moloney murine sarcoma virus] Sequence ID: P03334.3 Length: 538 Range 1: 216 to 430 Score:410 bits(1055), Expect:1e-141, Method:Compositional matrix adjust., Identities:199/215(93%), Positives:208/215(96%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 216 PLRTGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 275 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG+DGRPTQLPNEV++AFPLERPDW+YTT GRNHLV YRQ Sbjct 276 TLLTGEEKQRVLLEARKAVRGDDGRPTQLPNEVDAAFPLERPDWEYTTQAGRNHLVHYRQ 335 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LL+AGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 336 LLIAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 395 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDL++KTL DLVREAE+I Sbjct 396 SFIWQSAPDIGRKLERLEDLRNKTLGDLVREAERI 430 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA [Moloney murine sarcoma virus (strain TS110)] Sequence ID: P32594.3 Length: 468 Range 1: 216 to 430 Score:408 bits(1048), Expect:2e-141, Method:Compositional matrix adjust., Identities:198/215(92%), Positives:208/215(96%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSSSDLYNWK+NNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 216 PLRTGGNGQLQYWPFSSSDLYNWKSNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 275 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG+DGRPTQLPNEV++AFPLERPDW+YTT GRNHLV YRQ Sbjct 276 TLLTGEEKQRVLLEARKAVRGDDGRPTQLPNEVDAAFPLERPDWEYTTQAGRNHLVHYRQ 335 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LL+AGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 336 LLIAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 395 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDL++KTL DLVREAE+I Sbjct 396 SFIWQSAPDIGRKLERLEDLRNKTLGDLVREAERI 430 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Friend murine leukemia virus (ISOLATE FB29)] Sequence ID: P26806.3 Length: 538 Range 1: 216 to 430 Score:409 bits(1050), Expect:9e-141, Method:Compositional matrix adjust., Identities:200/215(93%), Positives:204/215(94%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQ QYWPFSSSDLYNWKNNNPSFSEDP KLTALIESVL THQPTWDDCQQLLG Sbjct 216 PLRLGGNGQYQYWPFSSSDLYNWKNNNPSFSEDPAKLTALIESVLLTHQPTWDDCQQLLG 275 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 276 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 335 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+V+M Sbjct 336 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVAM 395 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 396 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 430 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Friend murine leukemia virus (ISOLATE PVC-211)] Sequence ID: P0DOH6.1 Length: 626 Range 1: 304 to 518 Score:411 bits(1056), Expect:1e-140, Method:Compositional matrix adjust., Identities:201/215(93%), Positives:205/215(95%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQ QYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 304 PLRLGGNGQFQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLLTHQPTWDDCQQLLG 363 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 364 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 423 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 424 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 483 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLK+KTL DLVREAEKI Sbjct 484 SFIWQSAPDIGRKLERLEDLKNKTLGDLVREAEKI 518 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80; Contains: RecName: Full=Nextended-MA-p12; Contains: RecName: Full=CA-NC [Moloney murine leukemia virus neuropathogenic variant ts1-92b] Sequence ID: Q8UN02.2 Length: 626 Range 1: 304 to 518 Score:411 bits(1056), Expect:1e-140, Method:Compositional matrix adjust., Identities:200/215(93%), Positives:208/215(96%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 304 PLRTGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 363 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG+DGRPTQLPNEV++AFPLERPDW+YTT GRNHLV YRQ Sbjct 364 TLLTGEEKQRVLLEARKAVRGDDGRPTQLPNEVDAAFPLERPDWEYTTQAGRNHLVQYRQ 423 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+V+M Sbjct 424 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVAM 483 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLK+KTL DLVREAE+I Sbjct 484 SFIWQSAPDIGRKLERLEDLKNKTLGDLVREAERI 518 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Friend murine leukemia virus (ISOLATE 57)] Sequence ID: P26807.3 Length: 539 Range 1: 217 to 431 Score:407 bits(1047), Expect:3e-140, Method:Compositional matrix adjust., Identities:199/215(93%), Positives:203/215(94%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQ QYWPFSSSDLYNWKNNNPSFSEDP KLTALIESVL THQPTWDDCQQLLG Sbjct 217 PLRQGGNGQFQYWPFSSSDLYNWKNNNPSFSEDPAKLTALIESVLLTHQPTWDDCQQLLG 276 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 277 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 336 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+V+M Sbjct 337 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVAM 396 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 397 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 431 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Friend murine leukemia virus (ISOLATE FB29)] Sequence ID: P0DOH5.1 Length: 626 Range 1: 304 to 518 Score:409 bits(1050), Expect:1e-139, Method:Compositional matrix adjust., Identities:200/215(93%), Positives:204/215(94%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQ QYWPFSSSDLYNWKNNNPSFSEDP KLTALIESVL THQPTWDDCQQLLG Sbjct 304 PLRLGGNGQYQYWPFSSSDLYNWKNNNPSFSEDPAKLTALIESVLLTHQPTWDDCQQLLG 363 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 364 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 423 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+V+M Sbjct 424 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVAM 483 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 484 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 518 >RecName: Full=Gag-pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Murine leukemia virus (strain BM5 ECO)] Sequence ID: Q7SVK7.2 Length: 1734 Range 1: 215 to 429 Score:431 bits(1108), Expect:6e-139, Method:Compositional matrix adjust., Identities:211/215(98%), Positives:212/215(98%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 215 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 274 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ Sbjct 275 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 334 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 335 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 394 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAP IGRKLERLEDLKSKTL DLVREAEKI Sbjct 395 SFIWQSAPAIGRKLERLEDLKSKTLGDLVREAEKI 429 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Friend murine leukemia virus (ISOLATE 57)] Sequence ID: P0DOH0.1 Length: 627 Range 1: 305 to 519 Score:407 bits(1045), Expect:8e-139, Method:Compositional matrix adjust., Identities:199/215(93%), Positives:203/215(94%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQ QYWPFSSSDLYNWKNNNPSFSEDP KLTALIESVL THQPTWDDCQQLLG Sbjct 305 PLRQGGNGQFQYWPFSSSDLYNWKNNNPSFSEDPAKLTALIESVLLTHQPTWDDCQQLLG 364 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 365 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 424 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+V+M Sbjct 425 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVAM 484 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 485 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 519 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-pol; Contains: RecName: Full=Protease p14; Short=PR; Contains: RecName: Full=Reverse transcriptase/ribonuclease H p80; Short=RT; Contains: RecName: Full=Integrase p46; Short=IN [Xenotropic MuLV-related virus VP62] Sequence ID: A1Z651.1 Length: 1733 Range 1: 214 to 428 Score:426 bits(1095), Expect:4e-137, Method:Compositional matrix adjust., Identities:207/215(96%), Positives:211/215(98%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR+GG+GQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 214 PLRMGGDGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVN+AFPLERPDWDYTT EGRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNAAFPLERPDWDYTTTEGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [AKR (endogenous) murine leukemia virus] Sequence ID: P03356.3 Length: 1734 Range 1: 215 to 429 Score:425 bits(1092), Expect:1e-136, Method:Compositional matrix adjust., Identities:207/215(96%), Positives:211/215(98%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 215 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 274 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEV++AFPLERPDWDYTT GRNHLVLYRQ Sbjct 275 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVDAAFPLERPDWDYTTQRGRNHLVLYRQ 334 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 335 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 394 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAE+I Sbjct 395 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAERI 429 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-pol; Contains: RecName: Full=Protease p14; Short=PR; Contains: RecName: Full=Reverse transcriptase/ribonuclease H p80; Short=RT; Contains: RecName: Full=Integrase p46; Short=IN [Xenotropic MuLV-related virus VP42] Sequence ID: Q2F7J0.1 Length: 1733 Range 1: 214 to 428 Score:424 bits(1089), Expect:3e-136, Method:Compositional matrix adjust., Identities:206/215(96%), Positives:210/215(97%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR+GG+GQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 214 PLRMGGDGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVN+AFPLERPDW YTT EGRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNAAFPLERPDWGYTTTEGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-pol; Contains: RecName: Full=Protease p14; Short=PR; Contains: RecName: Full=Reverse transcriptase/ribonuclease H p80; Short=RT; Contains: RecName: Full=Integrase p46; Short=IN [Xenotropic MuLV-related virus VP35] Sequence ID: Q2F7J3.1 Length: 1733 Range 1: 214 to 428 Score:423 bits(1088), Expect:5e-136, Method:Compositional matrix adjust., Identities:206/215(96%), Positives:210/215(97%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR+GG+GQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 214 PLRMGGDGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEA KAVRGNDGRPTQLPNEVN+AFPLERPDWDYTT EGRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEAGKAVRGNDGRPTQLPNEVNAAFPLERPDWDYTTTEGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Cas-Br-E murine leukemia virus] Sequence ID: P08361.2 Length: 1733 Range 1: 214 to 428 Score:418 bits(1074), Expect:4e-134, Method:Compositional matrix adjust., Identities:204/215(95%), Positives:206/215(95%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 214 PLRSGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLLTHQPTWDDCQQLLG 273 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPNE+N AFPLERPDWDY T GRNHLVLYRQ Sbjct 274 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNEINDAFPLERPDWDYNTQRGRNHLVLYRQ 333 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 334 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 393 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 394 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 428 >RecName: Full=Gag-Pol polyprotein; Short=Pr180gag-pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Short=PR; AltName: Full=p14; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; AltName: Full=p80; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=p46 [Moloney murine leukemia virus isolate Shinnick] Sequence ID: P03355.5 Length: 1738 Range 1: 216 to 430 Score:417 bits(1071), Expect:1e-133, Method:Compositional matrix adjust., Identities:203/215(94%), Positives:208/215(96%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 216 PLRAGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLG 275 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG+DGRPTQLPNEV++AFPLERPDWDYTT GRNHLV YRQ Sbjct 276 TLLTGEEKQRVLLEARKAVRGDDGRPTQLPNEVDAAFPLERPDWDYTTQAGRNHLVHYRQ 335 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 336 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 395 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLK+KTL DLVREAEKI Sbjct 396 SFIWQSAPDIGRKLERLEDLKNKTLGDLVREAEKI 430 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Friend murine leukemia virus (ISOLATE PVC-211)] Sequence ID: P26808.2 Length: 1738 Range 1: 216 to 430 Score:414 bits(1064), Expect:1e-132, Method:Compositional matrix adjust., Identities:201/215(93%), Positives:205/215(95%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQ QYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVL THQPTWDDCQQLLG Sbjct 216 PLRLGGNGQFQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLLTHQPTWDDCQQLLG 275 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 276 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 335 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+VSM Sbjct 336 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSM 395 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLK+KTL DLVREAEKI Sbjct 396 SFIWQSAPDIGRKLERLEDLKNKTLGDLVREAEKI 430 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Friend murine leukemia virus (ISOLATE FB29)] Sequence ID: P26809.2 Length: 1738 Range 1: 216 to 430 Score:411 bits(1056), Expect:1e-131, Method:Compositional matrix adjust., Identities:200/215(93%), Positives:204/215(94%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQ QYWPFSSSDLYNWKNNNPSFSEDP KLTALIESVL THQPTWDDCQQLLG Sbjct 216 PLRLGGNGQYQYWPFSSSDLYNWKNNNPSFSEDPAKLTALIESVLLTHQPTWDDCQQLLG 275 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 276 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 335 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+V+M Sbjct 336 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVAM 395 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 396 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 430 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Friend murine leukemia virus (ISOLATE 57)] Sequence ID: P26810.2 Length: 1739 Range 1: 217 to 431 Score:410 bits(1053), Expect:4e-131, Method:Compositional matrix adjust., Identities:199/215(93%), Positives:203/215(94%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR GGNGQ QYWPFSSSDLYNWKNNNPSFSEDP KLTALIESVL THQPTWDDCQQLLG Sbjct 217 PLRQGGNGQFQYWPFSSSDLYNWKNNNPSFSEDPAKLTALIESVLLTHQPTWDDCQQLLG 276 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 TLLTGEEKQRVLLEARKAVRG DGRPTQLPN++N AFPLERPDWDY T GRNHLV YRQ Sbjct 277 TLLTGEEKQRVLLEARKAVRGEDGRPTQLPNDINDAFPLERPDWDYNTQRGRNHLVHYRQ 336 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPED GQET+V+M Sbjct 337 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVAM 396 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFIWQSAPDIGRKLERLEDLKSKTL DLVREAEKI Sbjct 397 SFIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKI 431 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Feline leukemia virus] Sequence ID: P10262.3 Length: 506 Range 1: 198 to 412 Score:315 bits(807), Expect:2e-104, Method:Compositional matrix adjust., Identities:152/215(71%), Positives:175/215(81%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 198 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 257 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL RP+WD+ TP GR HL LYRQ Sbjct 258 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQ 317 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGL+ A R PTNLA+VK + QG E+P+AFLERLKEAYR YTPYDPED GQ SV + Sbjct 318 LLLAGLRGAARRPTNLAQVKQVVQGKEETPAAFLERLKEAYRMYTPYDPEDPGQAASVIL 377 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFI+QS+PDI KL+RLE L+ TL DL++EAEKI Sbjct 378 SFIYQSSPDIRNKLQRLEGLQGFTLSDLLKEAEKI 412 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10; Short=NC-gag [Feline sarcoma virus (STRAIN MCDONOUGH)] Sequence ID: P03340.2 Length: 459 Range 1: 198 to 412 Score:312 bits(800), Expect:5e-104, Method:Compositional matrix adjust., Identities:151/215(70%), Positives:174/215(80%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK +NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 198 PLREGPNNRPQYWPFSASDLYNWKLHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 257 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLT EE+QRVLLEARK V G DGRPTQLPN ++ AFPL RP+WD+ TP GR HL LYRQ Sbjct 258 ALLTAEERQRVLLEARKQVPGEDGRPTQLPNVIDEAFPLTRPNWDFATPAGREHLRLYRQ 317 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGL+ A R PTNLA+VK + QG E+P++FLERLKEAYR YTPYDPED GQ SV + Sbjct 318 LLLAGLRGAARRPTNLAQVKQVVQGKEETPASFLERLKEAYRMYTPYDPEDPGQAASVIL 377 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFI+QS+PDI KL+RLE L+ TL DL++EAEKI Sbjct 378 SFIYQSSPDIRNKLQRLEGLQGFTLSDLLKEAEKI 412 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Feline leukemia virus] Sequence ID: P0DOH3.1 Length: 580 Range 1: 272 to 486 Score:316 bits(809), Expect:7e-104, Method:Compositional matrix adjust., Identities:152/215(71%), Positives:175/215(81%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 272 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 331 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL RP+WD+ TP GR HL LYRQ Sbjct 332 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQ 391 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGL+ A R PTNLA+VK + QG E+P+AFLERLKEAYR YTPYDPED GQ SV + Sbjct 392 LLLAGLRGAARRPTNLAQVKQVVQGKEETPAAFLERLKEAYRMYTPYDPEDPGQAASVIL 451 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFI+QS+PDI KL+RLE L+ TL DL++EAEKI Sbjct 452 SFIYQSSPDIRNKLQRLEGLQGFTLSDLLKEAEKI 486 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Feline sarcoma virus (STRAIN MCDONOUGH)] Sequence ID: P0DOH2.1 Length: 536 Range 1: 275 to 489 Score:313 bits(802), Expect:3e-103, Method:Compositional matrix adjust., Identities:151/215(70%), Positives:174/215(80%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK +NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 275 PLREGPNNRPQYWPFSASDLYNWKLHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 334 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLT EE+QRVLLEARK V G DGRPTQLPN ++ AFPL RP+WD+ TP GR HL LYRQ Sbjct 335 ALLTAEERQRVLLEARKQVPGEDGRPTQLPNVIDEAFPLTRPNWDFATPAGREHLRLYRQ 394 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGL+ A R PTNLA+VK + QG E+P++FLERLKEAYR YTPYDPED GQ SV + Sbjct 395 LLLAGLRGAARRPTNLAQVKQVVQGKEETPASFLERLKEAYRMYTPYDPEDPGQAASVIL 454 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFI+QS+PDI KL+RLE L+ TL DL++EAEKI Sbjct 455 SFIYQSSPDIRNKLQRLEGLQGFTLSDLLKEAEKI 489 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Feline leukemia virus] Sequence ID: P10273.2 Length: 1712 Range 1: 198 to 412 Score:316 bits(809), Expect:1e-97, Method:Compositional matrix adjust., Identities:152/215(71%), Positives:175/215(81%), Gaps:0/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 198 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 257 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL RP+WD+ TP GR HL LYRQ Sbjct 258 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQ 317 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLLAGL+ A R PTNLA+VK + QG E+P+AFLERLKEAYR YTPYDPED GQ SV + Sbjct 318 LLLAGLRGAARRPTNLAQVKQVVQGKEETPAAFLERLKEAYRMYTPYDPEDPGQAASVIL 377 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFI+QS+PDI KL+RLE L+ TL DL++EAEKI Sbjct 378 SFIYQSSPDIRNKLQRLEGLQGFTLSDLLKEAEKI 412 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Woolly monkey sarcoma virus] Sequence ID: P03330.4 Length: 521 Range 1: 213 to 418 Score:288 bits(736), Expect:1e-93, Method:Compositional matrix adjust., Identities:134/206(65%), Positives:167/206(81%), Gaps:0/206(0%) Query 10 LQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLGTLLTGEEKQ 69 LQYWPFSS+DLYNWK+N+PSFSE+P LT L+ES++ +HQPTWDDCQQLL L T EE++ Sbjct 213 LQYWPFSSADLYNWKSNHPSFSENPAGLTGLLESLMFSHQPTWDDCQQLLQILFTTEERE 272 Query 70 RVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQLLLAGLQNA 129 R+LLEARK V G++G PTQL N +N AFPL RP WDY T GR L++YR+ L+AGL+ A Sbjct 273 RILLEARKNVLGDNGAPTQLENLINEAFPLNRPQWDYNTAAGRERLLVYRRTLVAGLKGA 332 Query 130 GRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSMSFIWQSAPD 189 R PTNLAKV+ + QGP E PS FLERL EAYRRYTP+DP + GQ+ +V+M+FI QSAPD Sbjct 333 ARRPTNLAKVREVLQGPAEPPSVFLERLMEAYRRYTPFDPSEEGQQAAVAMAFIGQSAPD 392 Query 190 IGRKLERLEDLKSKTLRDLVREAEKI 215 I +KL+RLE L+ +L+DLVREAEK+ Sbjct 393 IKKKLQRLEGLQDYSLQDLVREAEKV 418 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Gibbon ape leukemia virus] Sequence ID: P21416.3 Length: 520 Range 1: 212 to 417 Score:286 bits(731), Expect:7e-93, Method:Compositional matrix adjust., Identities:133/206(65%), Positives:166/206(80%), Gaps:0/206(0%) Query 10 LQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLGTLLTGEEKQ 69 LQYWPFSS+DLYNWK+N+PSFSE+P LT L+ES++ +HQPTWDDCQQLL L T EE++ Sbjct 212 LQYWPFSSADLYNWKSNHPSFSENPAGLTGLLESLMFSHQPTWDDCQQLLQILFTTEERE 271 Query 70 RVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQLLLAGLQNA 129 R+LLEARK V G++G PTQL N +N AFPL RP WDY T GR L++YR+ L+AGL+ A Sbjct 272 RILLEARKNVLGDNGAPTQLENLINEAFPLNRPHWDYNTAAGRERLLVYRRTLVAGLKGA 331 Query 130 GRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSMSFIWQSAPD 189 R PTNLAKV+ + QGP E PS FLERL EAYRRYTP+DP GQ+ +V+M+FI QSAPD Sbjct 332 ARRPTNLAKVREVLQGPAEPPSVFLERLMEAYRRYTPFDPSSEGQQAAVAMAFIGQSAPD 391 Query 190 IGRKLERLEDLKSKTLRDLVREAEKI 215 I +KL+RLE L+ +L+DLV+EAEK+ Sbjct 392 IKKKLQRLEGLQDYSLQDLVKEAEKV 417 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Koala retrovirus] Sequence ID: Q9TTC2.3 Length: 521 Range 1: 213 to 418 Score:285 bits(730), Expect:9e-93, Method:Compositional matrix adjust., Identities:133/206(65%), Positives:166/206(80%), Gaps:0/206(0%) Query 10 LQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLGTLLTGEEKQ 69 LQYWPFSS+DLYNWK+N+PSFSE+P LT L+ES++ +HQPTWDDCQQLL L T EE++ Sbjct 213 LQYWPFSSADLYNWKSNHPSFSENPTGLTGLLESLMFSHQPTWDDCQQLLQVLFTTEERE 272 Query 70 RVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQLLLAGLQNA 129 R+LLEARK V G +G PTQL N +N AFPL RP WD+ T EGR L++YR+ L+AGL+ A Sbjct 273 RILLEARKNVLGVNGAPTQLENLINEAFPLNRPQWDHNTAEGRERLLVYRRTLVAGLKGA 332 Query 130 GRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSMSFIWQSAPD 189 R PTNLAKV+ + QGP E PS FLERL EAYRRYTP+DP GQ+ +V+MSFI QSAPD Sbjct 333 ARRPTNLAKVREVLQGPTEPPSVFLERLMEAYRRYTPFDPSSEGQKAAVAMSFIGQSAPD 392 Query 190 IGRKLERLEDLKSKTLRDLVREAEKI 215 I +KL+RLE L+ +L+DL++EAEK+ Sbjct 393 IKKKLQRLEGLQDHSLQDLIKEAEKV 418 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Baboon endogenous virus strain M7] Sequence ID: P03341.4 Length: 537 Range 1: 227 to 440 Score:282 bits(721), Expect:3e-91, Method:Compositional matrix adjust., Identities:139/215(65%), Positives:169/215(78%), Gaps:1/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR N +QYWPFS+SDLYNWK +NPSFS+DP LT+LIES+L THQPTWDDCQQLL Sbjct 227 PLRTV-NRTIQYWPFSASDLYNWKTHNPSFSQDPQALTSLIESILLTHQPTWDDCQQLLQ 285 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLT EE+QRVLLEARK V G G PTQLPNE++ FPL RPDWDY T GR L +YRQ Sbjct 286 VLLTTEERQRVLLEARKNVPGPGGLPTQLPNEIDEGFPLTRPDWDYETAPGRESLRIYRQ 345 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLAGL+ AG+ PTNLAKV+ ITQG +ESP+AF+ERL E +R YTP+DPE + +V+M Sbjct 346 ALLAGLKGAGKRPTNLAKVRTITQGKDESPAAFMERLLEGFRMYTPFDPEAPEHKATVAM 405 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFI Q+A DI KL+RL+ +++ L++LVREAEK+ Sbjct 406 SFIDQAALDIKGKLQRLDGIQTHGLQELVREAEKV 440 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Short=PR; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; AltName: Full=p80; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=p46 [Woolly monkey sarcoma virus] Sequence ID: P03359.2 Length: 1687 Range 1: 213 to 418 Score:289 bits(740), Expect:2e-88, Method:Compositional matrix adjust., Identities:134/206(65%), Positives:167/206(81%), Gaps:0/206(0%) Query 10 LQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLGTLLTGEEKQ 69 LQYWPFSS+DLYNWK+N+PSFSE+P LT L+ES++ +HQPTWDDCQQLL L T EE++ Sbjct 213 LQYWPFSSADLYNWKSNHPSFSENPAGLTGLLESLMFSHQPTWDDCQQLLQILFTTEERE 272 Query 70 RVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQLLLAGLQNA 129 R+LLEARK V G++G PTQL N +N AFPL RP WDY T GR L++YR+ L+AGL+ A Sbjct 273 RILLEARKNVLGDNGAPTQLENLINEAFPLNRPQWDYNTAAGRERLLVYRRTLVAGLKGA 332 Query 130 GRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSMSFIWQSAPD 189 R PTNLAKV+ + QGP E PS FLERL EAYRRYTP+DP + GQ+ +V+M+FI QSAPD Sbjct 333 ARRPTNLAKVREVLQGPAEPPSVFLERLMEAYRRYTPFDPSEEGQQAAVAMAFIGQSAPD 392 Query 190 IGRKLERLEDLKSKTLRDLVREAEKI 215 I +KL+RLE L+ +L+DLVREAEK+ Sbjct 393 IKKKLQRLEGLQDYSLQDLVREAEKV 418 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Gibbon ape leukemia virus] Sequence ID: P21414.2 Length: 1686 Range 1: 212 to 417 Score:287 bits(734), Expect:1e-87, Method:Compositional matrix adjust., Identities:133/206(65%), Positives:166/206(80%), Gaps:0/206(0%) Query 10 LQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLGTLLTGEEKQ 69 LQYWPFSS+DLYNWK+N+PSFSE+P LT L+ES++ +HQPTWDDCQQLL L T EE++ Sbjct 212 LQYWPFSSADLYNWKSNHPSFSENPAGLTGLLESLMFSHQPTWDDCQQLLQILFTTEERE 271 Query 70 RVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQLLLAGLQNA 129 R+LLEARK V G++G PTQL N +N AFPL RP WDY T GR L++YR+ L+AGL+ A Sbjct 272 RILLEARKNVLGDNGAPTQLENLINEAFPLNRPHWDYNTAAGRERLLVYRRTLVAGLKGA 331 Query 130 GRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSMSFIWQSAPD 189 R PTNLAKV+ + QGP E PS FLERL EAYRRYTP+DP GQ+ +V+M+FI QSAPD Sbjct 332 ARRPTNLAKVREVLQGPAEPPSVFLERLMEAYRRYTPFDPSSEGQQAAVAMAFIGQSAPD 391 Query 190 IGRKLERLEDLKSKTLRDLVREAEKI 215 I +KL+RLE L+ +L+DLV+EAEK+ Sbjct 392 IKKKLQRLEGLQDYSLQDLVKEAEKV 417 >RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr125Pol; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease/Reverse transcriptase/ribonuclease H; AltName: Full=p87; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=p42 [Koala retrovirus] Sequence ID: Q9TTC1.2 Length: 1687 Range 1: 213 to 418 Score:286 bits(733), Expect:2e-87, Method:Compositional matrix adjust., Identities:133/206(65%), Positives:166/206(80%), Gaps:0/206(0%) Query 10 LQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLGTLLTGEEKQ 69 LQYWPFSS+DLYNWK+N+PSFSE+P LT L+ES++ +HQPTWDDCQQLL L T EE++ Sbjct 213 LQYWPFSSADLYNWKSNHPSFSENPTGLTGLLESLMFSHQPTWDDCQQLLQVLFTTEERE 272 Query 70 RVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQLLLAGLQNA 129 R+LLEARK V G +G PTQL N +N AFPL RP WD+ T EGR L++YR+ L+AGL+ A Sbjct 273 RILLEARKNVLGVNGAPTQLENLINEAFPLNRPQWDHNTAEGRERLLVYRRTLVAGLKGA 332 Query 130 GRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSMSFIWQSAPD 189 R PTNLAKV+ + QGP E PS FLERL EAYRRYTP+DP GQ+ +V+MSFI QSAPD Sbjct 333 ARRPTNLAKVREVLQGPTEPPSVFLERLMEAYRRYTPFDPSSEGQKAAVAMSFIGQSAPD 392 Query 190 IGRKLERLEDLKSKTLRDLVREAEKI 215 I +KL+RLE L+ +L+DL++EAEK+ Sbjct 393 IKKKLQRLEGLQDHSLQDLIKEAEKV 418 >RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Pol; Short=NC-pol; Contains: RecName: Full=Protease; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Baboon endogenous virus strain M7] Sequence ID: P10272.2 Length: 1727 Range 1: 227 to 440 Score:283 bits(724), Expect:3e-86, Method:Compositional matrix adjust., Identities:139/215(65%), Positives:169/215(78%), Gaps:1/215(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR N +QYWPFS+SDLYNWK +NPSFS+DP LT+LIES+L THQPTWDDCQQLL Sbjct 227 PLRTV-NRTIQYWPFSASDLYNWKTHNPSFSQDPQALTSLIESILLTHQPTWDDCQQLLQ 285 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLT EE+QRVLLEARK V G G PTQLPNE++ FPL RPDWDY T GR L +YRQ Sbjct 286 VLLTTEERQRVLLEARKNVPGPGGLPTQLPNEIDEGFPLTRPDWDYETAPGRESLRIYRQ 345 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDHGQETSVSM 180 LLAGL+ AG+ PTNLAKV+ ITQG +ESP+AF+ERL E +R YTP+DPE + +V+M Sbjct 346 ALLAGLKGAGKRPTNLAKVRTITQGKDESPAAFMERLLEGFRMYTPFDPEAPEHKATVAM 405 Query 181 SFIWQSAPDIGRKLERLEDLKSKTLRDLVREAEKI 215 SFI Q+A DI KL+RL+ +++ L++LVREAEK+ Sbjct 406 SFIDQAALDIKGKLQRLDGIQTHGLQELVREAEKV 440 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA [Gardner-Arnstein feline sarcoma virus] Sequence ID: P03337.2 Length: 348 Range 1: 198 to 348 Score:226 bits(575), Expect:1e-71, Method:Compositional matrix adjust., Identities:106/151(70%), Positives:122/151(80%), Gaps:0/151(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 198 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 257 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL RP+WD+ TP GR HL LYRQ Sbjct 258 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQ 317 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPS 151 LLLAGL+ A R PTNLA+VK + QG E+P+ Sbjct 318 LLLAGLRGAARRPTNLAQVKQVVQGKEETPA 348 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Gardner-Arnstein feline sarcoma virus] Sequence ID: P0DOH1.1 Length: 425 Range 1: 275 to 425 Score:226 bits(577), Expect:7e-71, Method:Compositional matrix adjust., Identities:106/151(70%), Positives:122/151(80%), Gaps:0/151(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 275 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 334 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL RP+WD+ TP GR HL LYRQ Sbjct 335 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQ 394 Query 121 LLLAGLQNAGRSPTNLAKVKGITQGPNESPS 151 LLLAGL+ A R PTNLA+VK + QG E+P+ Sbjct 395 LLLAGLRGAARRPTNLAQVKQVVQGKEETPA 425 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA [Feline sarcoma virus (STRAIN HARDY-ZUCKERMAN 4)] Sequence ID: P04322.2 Length: 340 Range 1: 198 to 340 Score:218 bits(554), Expect:2e-68, Method:Compositional matrix adjust., Identities:102/143(71%), Positives:116/143(81%), Gaps:0/143(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 198 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 257 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL RP+WD+ TP GR HL LYRQ Sbjct 258 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQ 317 Query 121 LLLAGLQNAGRSPTNLAKVKGIT 143 LLLAGL+ A R PTNLA+VK + Sbjct 318 LLLAGLRGAARRPTNLAQVKQVV 340 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Feline sarcoma virus (STRAIN HARDY-ZUCKERMAN 4)] Sequence ID: P0DP83.1 Length: 414 Range 1: 272 to 414 Score:218 bits(554), Expect:1e-67, Method:Compositional matrix adjust., Identities:102/143(71%), Positives:116/143(81%), Gaps:0/143(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 272 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 331 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPEGRNHLVLYRQ 120 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL RP+WD+ TP GR HL LYRQ Sbjct 332 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQ 391 Query 121 LLLAGLQNAGRSPTNLAKVKGIT 143 LLLAGL+ A R PTNLA+VK + Sbjct 392 LLLAGLRGAARRPTNLAQVKQVV 414 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA [Finkel-Biskis-Jinkins murine sarcoma virus] Sequence ID: P29175.3 Length: 310 Range 1: 215 to 310 Score:189 bits(481), Expect:7e-58, Method:Compositional matrix adjust., Identities:94/110(85%), Positives:96/110(87%), Gaps:14/110(12%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLRLGGNGQ KNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG Sbjct 215 PLRLGGNGQ--------------KNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 260 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDWDYTTPE 110 TLLTGEEKQRVLLEARKAVRGNDGRPTQ+PNEVN+AFPLERPDWDYTTPE Sbjct 261 TLLTGEEKQRVLLEARKAVRGNDGRPTQMPNEVNAAFPLERPDWDYTTPE 310 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA [Snyder-Theilen feline sarcoma virus] Sequence ID: P03338.2 Length: 297 Range 1: 198 to 296 Score:157 bits(396), Expect:2e-45, Method:Compositional matrix adjust., Identities:73/99(74%), Positives:82/99(82%), Gaps:0/99(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 198 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 257 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPL 99 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL Sbjct 258 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPL 296 >RecName: Full=Glyco-Gag protein; AltName: Full=Gross cell surface antigen; AltName: Full=glycosylated Pr80 gag; Short=gPr80 Gag; Short=gag-gPr80 [Snyder-Theilen feline sarcoma virus] Sequence ID: P0DOG9.1 Length: 371 Range 1: 272 to 370 Score:157 bits(396), Expect:1e-44, Method:Compositional matrix adjust., Identities:73/99(74%), Positives:82/99(82%), Gaps:0/99(0%) Query 1 PLRLGGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG 60 PLR G N + QYWPFS+SDLYNWK++NP FS+DP LT LIES+L THQPTWDDCQQLL Sbjct 272 PLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQ 331 Query 61 TLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPL 99 LLTGEE+QRVLLEARK V G DGRPTQLPN ++ FPL Sbjct 332 ALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPL 370 >RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA [Avian spleen necrosis virus] Sequence ID: P03342.1 Length: 313 Range 1: 209 to 310 Score:114 bits(285), Expect:6e-29, Method:Compositional matrix adjust., Identities:54/102(53%), Positives:69/102(67%), Gaps:1/102(0%) Query 4 LGGNGQLQYWPFSSSDLYNWKNNNPS-FSEDPGKLTALIESVLTTHQPTWDDCQQLLGTL 62 + G Y PF++SDLYNWKN NPS FS+ P ++ +L+ESV THQPTWDDCQQLL TL Sbjct 209 MTGRPMRTYVPFTTSDLYNWKNQNPSSFSQAPDQVISLLESVFYTHQPTWDDCQQLLRTL 268 Query 63 LTGEEKQRVLLEARKAVRGNDGRPTQLPNEVNSAFPLERPDW 104 T EE++RV E+R+ VR + G E+ + FP RPDW Sbjct 269 FTTEERERVRTESRREVRNDQGVQVTDEREIEAQFPATRPDW 310 >RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; Contains: RecName: Full=Capsid protein p30; Short=CA [Abelson murine leukemia virus] Sequence ID: P03333.3 Length: 235 Range 1: 216 to 235 Score:44.7 bits(104), Expect:3e-04, Method:Compositional matrix adjust., Identities:19/20(95%), Positives:19/20(95%), Gaps:0/20(0%) Query 1 PLRLGGNGQLQYWPFSSSDL 20 PLR GGNGQLQYWPFSSSDL Sbjct 216 PLRTGGNGQLQYWPFSSSDL 235