BLASTN 2.12.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: S_cerevisiae_genome.fasta 17 sequences; 12,157,105 total letters Query= CP014225.1:complement(926804-928359)|16S_rRNA|Escherichia coli str. K-12 substr. MG1655 strain K-12 Length=1556 Score E Sequences producing significant alignments: (Bits) Value NC_001144.5 Saccharomyces cerevisiae S288C chromosome XII, comple... 56.3 4e-07 NC_001224.1 Saccharomyces cerevisiae S288c mitochondrion, complet... 54.5 1e-06 NC_001139.9 Saccharomyces cerevisiae S288C chromosome VII, comple... 31.9 4.5 >NC_001144.5 Saccharomyces cerevisiae S288C chromosome XII, complete sequence Length=1078177 Score = 56.3 bits (61), Expect = 4e-07 Identities = 38/43 (88%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 1494 AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA 1536 ||||||||||||||| ||||||| |||||||||| |||||| Sbjct 455978 AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA 455936 Score = 56.3 bits (61), Expect = 4e-07 Identities = 38/43 (88%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 1494 AAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA 1536 ||||||||||||||| ||||||| |||||||||| |||||| Sbjct 465115 AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA 465073 Score = 40.1 bits (43), Expect = 0.030 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Minus Query 1371 CGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTC 1409 || ||| ||||| || | | |||||||||||||||||| Sbjct 456127 CGTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTC 456089 Score = 40.1 bits (43), Expect = 0.030 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Minus Query 1371 CGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTC 1409 || ||| ||||| || | | |||||||||||||||||| Sbjct 465264 CGTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTC 465226 Score = 37.4 bits (40), Expect = 0.11 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 517 GTGCCAGCAGCCGCGGTAAT 536 |||||||||||||||||||| Sbjct 457171 GTGCCAGCAGCCGCGGTAAT 457152 Score = 37.4 bits (40), Expect = 0.11 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 517 GTGCCAGCAGCCGCGGTAAT 536 |||||||||||||||||||| Sbjct 466308 GTGCCAGCAGCCGCGGTAAT 466289 >NC_001224.1 Saccharomyces cerevisiae S288c mitochondrion, complete genome Length=85779 Score = 54.5 bits (59), Expect = 1e-06 Identities = 76/107 (71%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 881 CCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAA 940 || |||| ||||||| |||| | ||||||||| ||| ||||| | | || Sbjct 7489 CCACCTGAAGAGTACGTTAGCAATAATGAAACTCAAAACAATAGACGGTTACAGACTTAA 7548 Query 941 GCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACC 987 || ||||||||||| ||||||||||| | ||| ||||||||| Sbjct 7549 GCAGTGGAGCATGTTATTTAATTCGATAATCCACGACTAACCTTACC 7595 Score = 41.9 bits (45), Expect = 0.009 Identities = 33/40 (83%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 1493 GAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGG 1532 ||||| | || | || |||||||||||||||||||| || Sbjct 8128 GAAGTTGAAATACAGTTACCGTAGGGGAACCTGCGGTGGG 8167 >NC_001139.9 Saccharomyces cerevisiae S288C chromosome VII, complete sequence Length=1090940 Score = 31.9 bits (34), Expect = 4.5 Identities = 36/46 (78%), Gaps = 2/46 (4%) Strand=Plus/Minus Query 9 AAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAAC 54 |||||||||||||| | | ||| | | | ||| |||||| ||||| Sbjct 786305 AAGAGTTTGATCATCG-TTAGAGT-ACCCCTGACGGCAGTGCTAAC 786262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18587511734 Database: S_cerevisiae_genome.fasta Posted date: Mar 17, 2026 7:25 PM Number of letters in database: 12,157,105 Number of sequences in database: 17 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2