TBLASTN 2.8.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: X5.fasta 1,868 sequences; 23,962,143 total letters Query= ABD93689.1 translation elongation factor 1-alpha, partial [Chrysomyxa arctostaphyli] Length=299 Score E Sequences producing significant alignments: (Bits) Value scaffold-6 468 2e-151 scaffold-123 468 2e-151 scaffold-423 129 2e-33 scaffold-96 127 1e-32 scaffold-337 85.1 3e-20 scaffold-115 90.1 4e-20 scaffold-361 90.1 5e-20 unplaced-449 86.7 8e-19 scaffold-693 85.5 2e-18 > scaffold-6 Length=53904 Score = 468 bits (1205), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 229/302 (76%), Positives = 257/302 (85%), Gaps = 4/302 (1%) Frame = -1 Query 2 IVVGVDEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTCKWSEQRYDEIVKETSNF 61 I GV EFEAGISKDG TREHALLAFTLGV+QLIVAINKMDT K+SE RY+EIVKE S F Sbjct 22146 IAGGVGEFEAGISKDG*TREHALLAFTLGVKQLIVAINKMDTNKYSEARYEEIVKEVSGF 21967 Query 62 VKKVGFNPKTIPFVPISGWHGDNMLEESTNMNWFKGWCKEGK-TLVRGRTLLEAIDAIDK 120 +KKVG+NP ++PFVPISGWHGDNMLE S+NM WFKGW K+ K T+ +G+TLLEAID I+ Sbjct 21966 IKKVGYNPASVPFVPISGWHGDNMLEPSSNMPWFKGWTKDIKGTVTKGKTLLEAIDNIEP 21787 Query 121 PVRPDDKALRLPLQDVYKIGGIGTVPVGRVETGTIRAGMIVVFAPANVTTEVKSVEMHHE 180 P RP +K LRLPLQDVYKIGGIGTVPVGRVETG I+ GM+V FAP +TTEVKSVEMHHE Sbjct 21786 PQRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPVGLTTEVKSVEMHHE 21607 Query 181 QLECGMPGDNVGFNVKNVAVKDIRRGHVCGDTKNDPPKEAASFVAQVIVLNHPGQISAGY 240 L G+PGDNVGFNVKNV+VK+IRRG VC D+KNDP KEAASF AQVI+LNHPGQI AGY Sbjct 21606 SLPEGVPGDNVGFNVKNVSVKEIRRGFVCSDSKNDPAKEAASFNAQVIILNHPGQIGAGY 21427 Query 241 APVLDCHTAHIACKFDTLNEKIDRRSGICMEKIP---KSGDAALVKMVPSKPMCVEPFAD 297 +PVLDCHTAHIACKF L EKIDRRSG +E P KSGDAA+VK VP+KP+CVE F+D Sbjct 21426 SPVLDCHTAHIACKFSELLEKIDRRSGKKLEDNPKFLKSGDAAIVKFVPTKPLCVESFSD 21247 Query 298 YP 299 YP Sbjct 21246 YP 21241 > scaffold-123 Length=442268 Score = 468 bits (1205), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 229/302 (76%), Positives = 257/302 (85%), Gaps = 4/302 (1%) Frame = -3 Query 2 IVVGVDEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTCKWSEQRYDEIVKETSNF 61 I GV EFEAGISKDG TREHALLAFTLGV+QLIVAINKMDT K+SE RY+EIVKE S F Sbjct 184914 IAGGVGEFEAGISKDG*TREHALLAFTLGVKQLIVAINKMDTNKYSEARYEEIVKEVSGF 184735 Query 62 VKKVGFNPKTIPFVPISGWHGDNMLEESTNMNWFKGWCKEGK-TLVRGRTLLEAIDAIDK 120 +KKVG+NP ++PFVPISGWHGDNMLE S+NM WFKGW K+ K T+ +G+TLLEAID I+ Sbjct 184734 IKKVGYNPASVPFVPISGWHGDNMLEPSSNMPWFKGWTKDIKGTVTKGKTLLEAIDNIEP 184555 Query 121 PVRPDDKALRLPLQDVYKIGGIGTVPVGRVETGTIRAGMIVVFAPANVTTEVKSVEMHHE 180 P RP +K LRLPLQDVYKIGGIGTVPVGRVETG I+ GM+V FAP +TTEVKSVEMHHE Sbjct 184554 PQRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVGLTTEVKSVEMHHE 184375 Query 181 QLECGMPGDNVGFNVKNVAVKDIRRGHVCGDTKNDPPKEAASFVAQVIVLNHPGQISAGY 240 L G+PGDNVGFNVKNV+VK+IRRG VC D+KNDP KEAASF AQVI+LNHPGQI AGY Sbjct 184374 SLPEGVPGDNVGFNVKNVSVKEIRRGFVCSDSKNDPAKEAASFNAQVIILNHPGQIGAGY 184195 Query 241 APVLDCHTAHIACKFDTLNEKIDRRSGICMEKIP---KSGDAALVKMVPSKPMCVEPFAD 297 +PVLDCHTAHIACKF L EKIDRRSG +E P KSGDAA+VK VP+KP+CVE F+D Sbjct 184194 SPVLDCHTAHIACKFSELLEKIDRRSGKKLEDNPKFLKSGDAAIVKFVPTKPLCVESFSD 184015 Query 298 YP 299 YP Sbjct 184014 YP 184009 > scaffold-423 Length=1446679 Score = 129 bits (324), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 154/302 (51%), Gaps = 24/302 (8%) Frame = +1 Query 8 EFEAGISKDGQTREHALLAFTLGVRQLIVAINKMD--TCKWSEQRYDEIVKETSNFVKKV 65 EFE G K GQTREHALLA G++ LIVAINKMD T WS++R+ E + + + ++ +V Sbjct 1295200 EFETGFEKGGQTREHALLASNAGLKNLIVAINKMDDSTVNWSKERFQECIDKLTPYLTQV 1295379 Query 66 GFN-PKTIPFVPISGWHGDNMLEESTN--MNWFKGWCKEGKTLVRGRTLLEAIDAIDKPV 122 G++ + + F+P+SG+ G N+ + + W+ G +LLE +D + Sbjct 1295380 GYDVSQDVKFIPLSGFTGANLKDRAGKDVCPWYD-----------GPSLLEQLDGMAAVE 1295526 Query 123 RPDDKALRLPLQDVYKIGGIGTVPVGRVETGTIRAGMIVVFAPANVTTEVKSVEMH-HEQ 181 R +D+ +P+ + +K G + G+VE+G +R G V P EV +++ E+ Sbjct 1295527 RKNDQPFMMPIAERWKDMG-NLIVTGKVESGRVRIGKEAVIMPLKKICEVLTIQNEAEEE 1295703 Query 182 LECGMPGDNVGFNVKNVAVKDIRRGHV-CGDTKNDPPKEAASFVAQVIVLNHPGQISAGY 240 ++ + GDN ++ + +++ G V C + K + F ++ +L+ G + G+ Sbjct 1295704 VKGVVSGDNAKIKIRGIDEDEVQPGFVLCSPWAS--VKTVSRFEVELTILDVTGIVCPGF 1295877 Query 241 APVLDCHTA---HIACKFDTLNEKIDRRSGICMEKIPKSGDAALVKMVPSKPMCVEPFAD 297 +L HTA I +F L + +R K+G + KM P+C+E F D Sbjct 1295878 RSMLHVHTAV*EVILGQFMYLVDPKTKRKSKKPPMFVKNGQVLVCKMEALLPICLETFED 1296057 Query 298 YP 299 +P Sbjct 1296058 HP 1296063 > scaffold-96 Length=364303 Score = 127 bits (318), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 153/302 (51%), Gaps = 24/302 (8%) Frame = -1 Query 8 EFEAGISKDGQTREHALLAFTLGVRQLIVAINKMD--TCKWSEQRYDEIVKETSNFVKKV 65 EFE G K GQTREHALLA G++ LIVAINKMD T WS++R+ E + + + ++ +V Sbjct 109450 EFETGFEKGGQTREHALLASNAGLKNLIVAINKMDDSTVNWSKERF*ECIDKLTPYLTQV 109271 Query 66 GFN-PKTIPFVPISGWHGDNMLEESTN--MNWFKGWCKEGKTLVRGRTLLEAIDAIDKPV 122 G++ + + F+P+SG+ G N+ + + W+ G +LLE +D + Sbjct 109270 GYDVSQDVKFIPLSGFTGANLKDRAGKDVCPWYD-----------GPSLLEQLDGMAAVE 109124 Query 123 RPDDKALRLPLQDVYKIGGIGTVPVGRVETGTIRAGMIVVFAPANVTTEVKSVEMH-HEQ 181 R +D+ +P+ + +K G + G+VE+G +R G V P EV +++ E+ Sbjct 109123 RKNDQPFMMPIAERWKDMG-NLIVTGKVESGRVRIGKEAVIMPLKKICEVLTIQNEAEEE 108947 Query 182 LECGMPGDNVGFNVKNVAVKDIRRGHV-CGDTKNDPPKEAASFVAQVIVLNHPGQISAGY 240 ++ + GDN ++ + +++ G V C + K F ++ +L+ G + G+ Sbjct 108946 VKGVVSGDNAKIKIRGIDEDEVQPGFVLCSPWAS--VKTMTRFEVELTILDVTGIVCPGF 108773 Query 241 APVLDCHTA---HIACKFDTLNEKIDRRSGICMEKIPKSGDAALVKMVPSKPMCVEPFAD 297 +L HTA I +F L + +R K+G + KM P+C+E F D Sbjct 108772 RSMLHVHTAV*EVILGQFMYLVDPKTKRKSKKPPMFVKNGQVLVCKMEALLPICLETFED 108593 Query 298 YP 299 +P Sbjct 108592 HP 108587 > scaffold-337 Length=502 Score = 85.1 bits (209), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 0/51 (0%) Frame = -2 Query 2 IVVGVDEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTCKWSEQRYD 52 I GV EFEAGISKDG TREHALLAFTLGV+QLIVAINKMDT K+SE RY+ Sbjct 153 IAGGVGEFEAGISKDG*TREHALLAFTLGVKQLIVAINKMDTNKYSEARYE 1 > scaffold-115 Length=160031 Score = 90.1 bits (222), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/205 (32%), Positives = 101/205 (49%), Gaps = 24/205 (12%) Frame = +2 Query 5 GVDEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTCKWSEQRYDEIVKETSNFV-K 63 GV FEAG +GQT+EHALLA +LGV +IVA+NKMDT W R+ I + ++ Sbjct 30161 GVG*FEAGFLNNGQTKEHALLARSLGVSSVIVAVNKMDTVDWDVGRF*SIKE*VHQYLTS 30340 Query 64 KVGFNPKTIPFVPISGWHGDNMLEESTNMNWFKGWCKEGKTLVRGRTLLEAIDAIDKPVR 123 VGF +I + SG G+N+L S K + +L++ ++ ++ PVR Sbjct 30341 SVGFKSDSIAYCACSGMTGENVLSLSA----------ADKFPSQK*SLVQLMNQLEAPVR 30490 Query 124 PDDKALRLPLQDVYKIGGIGTVP--------VGRVETGTIRAGMIVVFAPANVTTEVKSV 175 DK R VY I G +P GR+E G ++ G + P ++ +KS+ Sbjct 30491 TFDKPFRFT---VYTIAGGLNIPGSSGAVSVSGRIEQGYVQVGDDCLLLPGGISVFIKSI 30661 Query 176 --EMHHEQLECGMPGDNVGFNVKNV 198 E + ++ + GD+V + V Sbjct 30662 FKEPAGD*VDFAVSGDSVRLSFSGV 30736 > scaffold-361 Length=455836 Score = 90.1 bits (222), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 24/198 (12%) Frame = -3 Query 5 GVDEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTCKWSEQRYDEIVKETSNFV-K 63 GV FEAG +GQT+EHALLA +LGV +IVA+NKMDT W R+ I + ++ Sbjct 221351 GVG*FEAGFLNNGQTKEHALLARSLGVSSVIVAVNKMDTVDWDVDRF*SIKE*VHQYLTS 221172 Query 64 KVGFNPKTIPFVPISGWHGDNMLEESTNMNWFKGWCKEGKTLVRGRTLLEAIDAIDKPVR 123 VGF +I + SG G+N+L S K + +L+ ++ ++ PVR Sbjct 221171 SVGFKSDSISYCACSGMTGENVLSLSA----------ADKFPSQK*SLV*LMNQLEAPVR 221022 Query 124 PDDKALRLPLQDVYKIGGIGTVP--------VGRVETGTIRAGMIVVFAPANVTTEVKSV 175 DK R VY I G +P GR+E G ++ G + P ++ +KS+ Sbjct 221021 TFDKPFRFT---VYTIAGGLNIPGSSGAVSVSGRIEQGYVQVGEDCLLLPGGISVHIKSI 220851 Query 176 --EMHHEQLECGMPGDNV 191 E + ++ + GD+V Sbjct 220850 FKEPAAD*VDFAVSGDSV 220797 > unplaced-449 Length=36412 Score = 86.7 bits (213), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 68/195 (35%), Positives = 99/195 (51%), Gaps = 18/195 (9%) Frame = -2 Query 19 TREHALLAFTLGVRQLIVAINKMDTCKWSEQRYDEIVKETSNFVKKVGFNPKTIPFVPIS 78 TREH LLA +GV+ ++V +NK+D E + + E + + F+ P V S Sbjct 21315 TREHLLLARQVGVKHIVVFVNKVD*LDDPEM-LELVEMEMRELLTQYDFDGDNTPIVAGS 21139 Query 79 GWHGDNMLEESTNMNWFKGWCKEGKTLVRGRTLLEAIDA-IDKPVRPDDKALRLPLQDVY 137 + E+ + N GKT + L++A+D I P R DK P++D + Sbjct 21138 ALYA----LENKDDNGI------GKTAIL--KLMKAVDEWIPTPERGLDKPFLQPVEDTH 20995 Query 138 KIGGIGTVPVGRVETGTIRAGM---IVVFAPANVTTEVKSVEMHHEQLECGMPGDNVGFN 194 I G GTV GRVE GTI G IV F + + T V +EM H++L+ G GDN+G Sbjct 20994 SIAGRGTVVTGRVERGTILKGQEVEIVGFG-SKLKTAVTGLEMFHKELDRGEAGDNLGIL 20818 Query 195 VKNVAVKDIRRGHVC 209 ++ V +DIRRG V Sbjct 20817 LRGVKREDIRRGMVL 20773 > scaffold-693 Length=1268102 Score = 85.5 bits (210), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/195 (35%), Positives = 98/195 (50%), Gaps = 18/195 (9%) Frame = +3 Query 19 TREHALLAFTLGVRQLIVAINKMDTCKWSEQRYDEIVKETSNFVKKVGFNPKTIPFVPIS 78 TREH LLA +GV+ ++V +NK+D E + + E + F+ P V S Sbjct 781956 TREHLLLARQVGVKHIVVFVNKVDQLDDPEM-LELVEMEMRELLT*YDFDGDNTPIVAGS 782132 Query 79 GWHGDNMLEESTNMNWFKGWCKEGKTLVRGRTLLEAIDA-IDKPVRPDDKALRLPLQDVY 137 + E+ + N GKT + L++A+D I P R DK P++D + Sbjct 782133 ALYA----LENKDDNGI------GKTAIL--KLMKAVDEWIPTPERGLDKPFLQPVEDTH 782276 Query 138 KIGGIGTVPVGRVETGTIRAGM---IVVFAPANVTTEVKSVEMHHEQLECGMPGDNVGFN 194 I G GTV GRVE GTI G IV F + + T V +EM H++L+ G GDN+G Sbjct 782277 SIAGRGTVVTGRVERGTILKGQEVEIVGFG-SKLKTAVTGLEMFHKELDRGEAGDNLGIL 782453 Query 195 VKNVAVKDIRRGHVC 209 ++ V +DIRRG V Sbjct 782454 LRGVKREDIRRGMVL 782498 Lambda K H a alpha 0.319 0.137 0.420 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1576849370 Database: X5.fasta Posted date: Feb 2, 2022 10:52 PM Number of letters in database: 23,962,143 Number of sequences in database: 1,868 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40