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Header |
Program |
needle
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Rundate |
Fri Mar 30 2007 15:29:00
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Align format |
srspair
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Report file |
temp_job1.needlep
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Results |
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#=======================================
#
# Aligned_sequences: 2
# 1: PYRD_ECOLI
# 2: PYRD_HUMAN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity: 133/307 (43.3%)
# Similarity: 192/307 (62.5%)
# Gaps: 23/307 ( 7.5%)
# Score: 597.0
#
#
#=======================================
PYRD_ECOLI 1 ---VNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQP 47
|..:|..|:||:|:|||.||.||.:|.|..||||.:|||:|||:||.
PYRD_HUMAN 1 MLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQE 50
PYRD_ECOLI 48 GNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHY--------DGV 89
||.:||:|||.:.:.:|||.|||:.|: ::||:..:|.. ||:
PYRD_HUMAN 51 GNPRPRVFRLPEDQAVINRYGFNSHGL-SVVEHRLRARQQKQAKLTEDGL 99
PYRD_ECOLI 90 -LGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTL 138
||:|:|||| |.|: ..:||...:..:...|.|:.:|:|||||.|||:|
PYRD_HUMAN 100 PLGVNLGKNK-TSVD-AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSL 147
PYRD_ECOLI 139 QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSL 188
|....|..|||.:..:::.|:.:|.. .:.|||||||:.::...:|..:
PYRD_HUMAN 148 QGKAELRRLLTKVLQERDGLRRVHRP--AVLVKIAPDLTSQDKEDIASVV 195
PYRD_ECOLI 189 VRHNIDGVIATNTTLDRSL-VQGMKNCDQTGGLSGRPLQLKSTEIIRRLS 237
....|||:|.||||:.|.. :||... .:||||||:||:..||:.||.:.
PYRD_HUMAN 196 KELGIDGLIVTNTTVSRPAGLQGALR-SETGGLSGKPLRDLSTQTIREMY 244
PYRD_ECOLI 238 LELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIV 287
....||:|||||||:.|...|.|||.|||||||:|:...|.|||::.::.
PYRD_HUMAN 245 ALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVK 294
PYRD_ECOLI 288 THI---- 290
..:
PYRD_HUMAN 295 RELEALL 301
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Additional Information |
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