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Header
Program needle
Rundate Fri Mar 30 2007 15:29:00
Align format srspair
Report file temp_job1.needlep
Results
 
#=======================================
#
# Aligned_sequences: 2
# 1: PYRD_ECOLI
# 2: PYRD_HUMAN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     133/307 (43.3%)
# Similarity:   192/307 (62.5%)
# Gaps:          23/307 ( 7.5%)
# Score: 597.0
# 
#
#=======================================

PYRD_ECOLI         1 ---VNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQP     47
                        |..:|..|:||:|:|||.||.||.:|.|..||||.:|||:|||:||.
PYRD_HUMAN         1 MLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQE     50

PYRD_ECOLI        48 GNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHY--------DGV     89
                     ||.:||:|||.:.:.:|||.|||:.|: ::||:..:|..        ||:
PYRD_HUMAN        51 GNPRPRVFRLPEDQAVINRYGFNSHGL-SVVEHRLRARQQKQAKLTEDGL     99

PYRD_ECOLI        90 -LGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTL    138
                      ||:|:|||| |.|: ..:||...:..:...|.|:.:|:|||||.|||:|
PYRD_HUMAN       100 PLGVNLGKNK-TSVD-AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSL    147

PYRD_ECOLI       139 QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSL    188
                     |....|..|||.:..:::.|:.:|..  .:.|||||||:.::...:|..:
PYRD_HUMAN       148 QGKAELRRLLTKVLQERDGLRRVHRP--AVLVKIAPDLTSQDKEDIASVV    195

PYRD_ECOLI       189 VRHNIDGVIATNTTLDRSL-VQGMKNCDQTGGLSGRPLQLKSTEIIRRLS    237
                     ....|||:|.||||:.|.. :||... .:||||||:||:..||:.||.:.
PYRD_HUMAN       196 KELGIDGLIVTNTTVSRPAGLQGALR-SETGGLSGKPLRDLSTQTIREMY    244

PYRD_ECOLI       238 LELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIV    287
                     ....||:|||||||:.|...|.|||.|||||||:|:...|.|||::.::.
PYRD_HUMAN       245 ALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVK    294

PYRD_ECOLI       288 THI----    290
                     ..:    
PYRD_HUMAN       295 RELEALL    301


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