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Header |
Program |
needle
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Rundate |
Fri Mar 30 2007 20:53:48
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Align format |
srspair
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Report file |
temp_job1.needlep
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Results |
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#=======================================
#
# Aligned_sequences: 2
# 1: PYRD_ECOLI
# 2: PYRD_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity: 88/320 (27.5%)
# Similarity: 149/320 (46.6%)
# Gaps: 64/320 (20.0%)
# Score: 311.0
#
#
#=======================================
PYRD_ECOLI 1 ---VNCMGLTFKNPLGLAAG-LDKDGECIDALGAMGFGSIEIGTVTPRPQ 46
.|..|:.||||:.||:| :.:.|..:..:...|.|::...::...|.
PYRD_METJA 1 MLKTNICGIEFKNPVFLASGIMGETGSALKRIAKGGAGAVTTKSIGLNPN 50
PYRD_ECOLI 47 PGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYD------GVL 90
||:..|.:..:.. |.:|.||..|.|||..:|.::|...: .::
PYRD_METJA 51 PGHKNPTIVEVYG--GFLNAMGLPNPGVDEYLEEIEKVRDELNRMDVRII 98
PYRD_ECOLI 91 GINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQY 140
|...||:::...|..| |:..|...|.:|||.|:..| |
PYRD_METJA 99 GSIYGKDEEEFAEVAK--------KMERYVDIIELNISCPHAKG-----Y 135
PYRD_ECOLI 141 GEALD-------DLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQ 183
|..:. |:..|:|.... :|:..|:.|::: ::|:
PYRD_METJA 136 GATIGQNPDLSYDVCKAVKKAVK---------IPVFAKLTPNVT--DIIE 174
PYRD_ECOLI 184 VADSLVRHNIDGVIATNTTLDRSLVQGMK---------NCDQTGGLSGRP 224
:|.::|...:||::|.|| |:||. ..::.|||||:.
PYRD_METJA 175 IAQAVVDAGVDGLVAINT------VRGMAIDIRAKKPILANKFGGLSGKA 218
PYRD_ECOLI 225 LQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSG 274
::....::: ..|..|..:||||||||.|...|.|.:.||||.|||.||
PYRD_METJA 219 IKSIGIKVV--WDLYENFDVPIIGVGGIMSGEDAIEYMMAGASAVQIGSG 266
PYRD_ECOLI 275 FIFKGPPLIKEIVTHI---- 290
..::|..:.|::...|
PYRD_METJA 267 VYYRGYDIFKKVCDEIISFL 286
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Additional Information |
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