******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.5.1 (Release date: Sun Jan 29 10:33:12 2023 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ./term4/fixed.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACDEFGHIKLMNPQRSTVWY Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ A0A2A6CS93_PRIPA/244-512 1.0000 269 E3LJT9_CAERE/219-529 1.0000 311 A8WWU4_CAEBR/220-553 1.0000 334 G0NVS5_CAEBE/194-508 1.0000 315 T1EGR1_HELRO/180-500 1.0000 321 H2Y9A5_CIOSA/181-504 1.0000 324 G3P0Z0_GASAC/40-360 1.0000 321 M4AZW4_XIPMA/212-532 1.0000 321 H3CZ50_TETNG/209-524 1.0000 316 B4HHP7_DROSE/237-568 1.0000 332 D6WJY3_TRICA/215-541 1.0000 327 A0A8R2A6A8_ACYPI/255-575 1.0000 321 A0A2A3EBH9_APICC/227-562 1.0000 336 A0A212ETU9_DANPL/2-331 1.0000 330 E9G2J9_DAPPU/241-588 1.0000 348 B7PFK7_IXOSC/229-563 1.0000 335 A7SKM6_NEMVE/199-530 1.0000 332 A0A7M7GNW6_STRPU/216-549 1.0000 334 T1FXD5_HELRO/220-556 1.0000 337 B4LDK8_DROVI/296-608 1.0000 313 D6WG76_TRICA/231-540 1.0000 310 T1HKP7_RHOPR/236-541 1.0000 306 E0VGL1_PEDHC/204-525 1.0000 322 A0A8R2B9L2_ACYPI/255-564 1.0000 310 B7PAJ1_IXOSC/186-494 1.0000 309 E9FZ27_DAPPU/279-614 1.0000 336 A7S003_NEMVE/211-518 1.0000 308 F7AFK4_CIOIN/323-637 1.0000 315 F7CDC6_MONDO/270-622 1.0000 353 H2L9W7_ORYLA/224-534 1.0000 311 W5QC50_SHEEP/110-421 1.0000 312 G3NBP6_GASAC/213-529 1.0000 317 T1I187_RHOPR/159-463 1.0000 305 E2ABY3_CAMFO/213-531 1.0000 319 E0V9Z7_PEDHC/160-477 1.0000 318 B4MT43_DROWI/197-499 1.0000 303 B3MR18_DROAN/239-540 1.0000 302 B3S9M8_TRIAD/25-355 1.0000 331 A0A1X7VJ12_AMPQE/189-505 1.0000 317 E0VTY7_PEDHC/187-502 1.0000 316 T1G984_HELRO/142-468 1.0000 327 A7SCF4_NEMVE/210-527 1.0000 318 H2YBE7_CIOSA/188-508 1.0000 321 A3QK10_DANRE/217-537 1.0000 321 L5K680_PTEAL/177-499 1.0000 323 L9L1K9_TUPCH/203-534 1.0000 332 H2Y561_CIOSA/165-484 1.0000 320 A7SZJ6_NEMVE/180-488 1.0000 309 T1KGR8_TETUR/210-542 1.0000 333 F6S8I5_CIOIN/240-572 1.0000 333 H2YB72_CIOSA/200-525 1.0000 326 H2SHS4_TAKRU/214-535 1.0000 322 U3K8E4_FICAL/69-390 1.0000 322 G3NMF6_GASAC/185-508 1.0000 324 F6SSF6_XENTR/208-529 1.0000 322 I3MAR1_ICTTR/188-509 1.0000 322 A0A1X7VRK9_AMPQE/246-571 1.0000 326 E9GI97_DAPPU/225-556 1.0000 332 A0A8R1W5X2_ACYPI/202-528 1.0000 327 T1HLP2_RHOPR/168-495 1.0000 328 E0VGP6_PEDHC/215-541 1.0000 327 F4WKG2_ACREC/224-548 1.0000 325 B0W046_CULQU/239-567 1.0000 329 B4Q616_DROSI/244-568 1.0000 325 D6WXL7_TRICA/208-536 1.0000 329 B7Q4R2_IXOSC/152-491 1.0000 340 A7S829_NEMVE/175-502 1.0000 328 A0A6I8RRT2_XENTR/194-525 1.0000 332 A0A0G2JYI3_RAT/225-556 1.0000 332 T1JZ26_TETUR/239-549 1.0000 311 T1KSM5_TETUR/268-578 1.0000 311 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme ./term4/fixed.fasta -o meme_res -minw 4 -maxw 10 -nmotifs 3 -o meme_pr10 model: mod= zoops nmotifs= 3 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values width: minw= 4 maxw= 10 nsites: minsites= 2 maxsites= 71 wnsites= 0.8 theta: spmap= pam spfuzz= 120 em: prior= megap b= 114180 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 22874 N= 71 sample: seed= 0 hsfrac= 0 searchsize= 22874 norand= no csites= 1000 Dirichlet mixture priors file: prior30.plib Letter frequencies in dataset: A 0.0756 C 0.0333 D 0.026 E 0.0358 F 0.0738 G 0.0624 H 0.0178 I 0.0772 K 0.0386 L 0.116 M 0.0268 N 0.0232 P 0.0332 Q 0.0207 R 0.0458 S 0.0748 T 0.0583 V 0.0847 W 0.035 Y 0.0414 Background letter frequencies (from file dataset with add-one prior applied): A 0.0756 C 0.0333 D 0.026 E 0.0358 F 0.0738 G 0.0624 H 0.0178 I 0.0771 K 0.0386 L 0.116 M 0.0268 N 0.0232 P 0.0332 Q 0.0207 R 0.0458 S 0.0748 T 0.0583 V 0.0847 W 0.035 Y 0.0414 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF RFRYPERPII MEME-1 width = 10 sites = 59 llr = 1487 E-value = 2.9e-404 ******************************************************************************** -------------------------------------------------------------------------------- Motif RFRYPERPII MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::1::::::: pos.-specific C :::::::::: probability D :::::::::: matrix E :::::9:::: F :a:::::::: G :::::::::: H :::::::::: I ::::::::86 K ::2:::1::: L ::::::::11 M :::::::::: N :::::::::: P ::::a::9:: Q ::1::::::: R a:5:::9::: S :::::::1:: T :::::::::: V ::::::::12 W :::::::::: Y :::a:::::: bits 5.8 5.2 4.6 *** 4.1 * ***** Relative 3.5 ** ***** Entropy 2.9 ** ****** (36.4 bits) 2.3 ** ******* 1.7 ********** 1.2 ********** 0.6 ********** 0.0 ---------- Multilevel RFRYPERPII consensus K V sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RFRYPERPII MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------- I3MAR1_ICTTR/188-509 38 6.89e-14 TFLTFLIDVK RFRYPERPII YYSVCYSIVS F6SSF6_XENTR/208-529 38 6.89e-14 TVLTFLIDVQ RFRYPERPII FYSVCYSMVS G3NMF6_GASAC/185-508 38 6.89e-14 TFLTFLIDVK RFRYPERPII FYAVCYSFVS U3K8E4_FICAL/69-390 38 6.89e-14 TFLTFLIDVT RFRYPERPII FYAVCYMMVS H2SHS4_TAKRU/214-535 38 6.89e-14 TFLTFLIDVT RFRYPERPII FYAACYVMVS H2Y561_CIOSA/165-484 38 6.89e-14 TVLTFLIDAS RFRYPERPII LIAMCYNIYS H2YBE7_CIOSA/188-508 38 6.89e-14 TVCTFMIDSK RFRYPERPII FLSICYCAYS W5QC50_SHEEP/110-421 38 6.89e-14 TVATFLIDME RFRYPERPII FLSACYLCVS B7PAJ1_IXOSC/186-494 38 6.89e-14 TVLTFLMDTA RFRYPERPII FLSFCYLMVS A0A7M7GNW6_STRPU/216-549 38 6.89e-14 TVLTFLIDRS RFRYPERPII FLSGCYFVIS A7SKM6_NEMVE/199-530 38 6.89e-14 TILTFLIDMR RFRYPERPII FLSGCYFMVS B7PFK7_IXOSC/229-563 38 6.89e-14 TVLTFLIDMQ RFRYPERPII FLSFCNLMVS A0A212ETU9_DANPL/2-331 38 6.89e-14 TVLTFLIDTD RFRYPERPII FLSVCYLMVA A0A2A3EBH9_APICC/227-562 38 6.89e-14 TFLTFLIDTD RFRYPERPII FLSVCYLMVA A0A8R2A6A8_ACYPI/255-575 38 6.89e-14 TSLTFAIDTH RFRYPERPII FLSLCYLMVS D6WJY3_TRICA/215-541 38 6.89e-14 TVCTFLIDTN RFRYPERPII FLSVCYLMVA G3P0Z0_GASAC/40-360 38 6.89e-14 TVTTYLVDMQ RFRYPERPII FLSGCYTMVS A7SCF4_NEMVE/210-527 38 1.27e-13 TVLTFVIDTS RFKYPERPII FLSLCYNLYS G3NBP6_GASAC/213-529 38 1.27e-13 TVATFLIDME RFKYPERPII FLAACYLFVS H2L9W7_ORYLA/224-534 38 1.27e-13 TVATFLIDME RFKYPERPII FLSACYMFVS F7CDC6_MONDO/270-622 38 1.27e-13 TVSTFLIDME RFKYPERPII FLSACYLFVS A7S003_NEMVE/211-518 38 1.27e-13 TTLTFLVDMH RFKYPERPII FLSGCYLMVS L5K680_PTEAL/177-499 38 1.58e-13 TVLTFLLEPH RFQYPERPII FLSMCYNVYS A3QK10_DANRE/217-537 38 1.58e-13 TVLTFLLDPQ RFQYPERPII FLSMCYNIYS H2YB72_CIOSA/200-525 38 2.34e-13 VLFTFAIDTN RFRYPERPIV FYATSYLVIS F6S8I5_CIOIN/240-572 38 2.34e-13 VLFTFAIDTN RFRYPERPIV FYAAAYFVIS E2ABY3_CAMFO/213-531 38 2.34e-13 TLLTFWVEPS RFRYPERPIV FLALCYNLLS T1I187_RHOPR/159-463 38 2.34e-13 TLLTFWVDPR RFRYPERPIV FLALCYNAMS E0V9Z7_PEDHC/160-477 38 3.09e-13 TLLTFWVEPS RFRYPERPVI FLALCYCLIG T1G984_HELRO/142-468 38 4.27e-13 TFLTFILDTT RFEYPERPII YLSMCCLVYS E0VGL1_PEDHC/204-525 38 4.27e-13 TLTTYFIDTE RFKYPERPIV FLSACYFLVS T1HKP7_RHOPR/236-541 38 4.27e-13 TLTTFLIDTE RFKYPERPIV FLSACYFMVS D6WG76_TRICA/231-540 38 4.27e-13 TLTTFFIETE RFKYPERPIV FLSACYFLVS B4LDK8_DROVI/296-608 38 4.27e-13 TLTTFIIDTE RFKYPERPIV FLSACYFMVA F7AFK4_CIOIN/323-637 38 7.15e-13 TVGTYLIDTQ RFAYPERPII FLSACYMFVS E9FZ27_DAPPU/279-614 38 9.97e-13 TFATFLIDRP RFRYPERPLI FLSACYVGLS H2Y9A5_CIOSA/181-504 38 9.97e-13 TVLTYLIDMP RFMYPERPII FLSGCYLIVA L9L1K9_TUPCH/203-534 38 1.25e-12 TVLTFLIDSS RFSYPERPII FLSMCYNIYS T1FXD5_HELRO/220-556 38 1.25e-12 TLITFLVDMD RFPYPERPII FLSGCYLAVS E9G2J9_DAPPU/241-588 38 1.66e-12 TVLTFLLDVR RFRYPERPVV FLSVCYFMVA E0VTY7_PEDHC/187-502 40 3.39e-12 FTFLVDSGGG RFRYPERPLV FLALCYNLAS E3LJT9_CAERE/219-529 38 4.33e-12 TFLTFLIETD RFQYPERPIF MLAFCQLMVA A7SZJ6_NEMVE/180-488 38 4.72e-12 TLTTFLIETG RFKYPERSII WLALCYNFYS A0A8R2B9L2_ACYPI/255-564 38 9.73e-12 TLTTYTIDTQ RFKYPEKPIV FLSGCYLMVS B4HHP7_DROSE/237-568 38 1.88e-11 TVLTFLIDSS RFRYPERAIV FLAVCYLVVG T1KSM5_TETUR/268-578 38 2.06e-11 VIFTYLTGRE RFCYPERSII FLSACYLIVS T1JZ26_TETUR/239-549 38 2.06e-11 VIFTYLTDCE RFCYPERSII FLSTSYLMVS A0A1X7VRK9_AMPQE/246-571 39 6.13e-11 TVGTFMIDRQ RYHYPERPVI FLALCYLILS B3MR18_DROAN/239-540 38 6.71e-11 ALVTFWAEPT RFGYPERPVL FLCLCYNLFS B4MT43_DROWI/197-499 38 6.71e-11 ALVTFWAEPR RFGYPERPVL FLCLCYNLFS B3S9M8_TRIAD/25-355 38 7.99e-11 AILTAAIRPQ RFQYPERILI FMSICYNIYA A0A1X7VJ12_AMPQE/189-505 38 1.22e-10 TLLTFVIKPS RFEYPWRPII FLALCFNIHS M4AZW4_XIPMA/212-532 38 1.76e-10 TVLTYLLDRR RFVYPQRPII FLSGCSFMVA T1EGR1_HELRO/180-500 38 1.32e-09 TFLSFVVNAC KFKYPEKPIA YVSLCCLLMA A8WWU4_CAEBR/220-553 38 1.97e-09 TLVTFLVDLS RFAYPVRPIL YLAFCYLAIS H3CZ50_TETNG/209-524 38 2.12e-09 SLLTFLLARR RLAYPERPLL FLSGCYLMVA G0NVS5_CAEBE/194-508 38 8.43e-09 SFLTFAIDRK RFRFPERCVF YLSLCLFLSS A0A2A6CS93_PRIPA/244-512 38 2.89e-08 TLLTFLIEPD RFQYPESTSV CFAVFLLTYF T1KGR8_TETUR/210-542 38 4.11e-08 TLFTHLLESR RFSYPEKILK FLAISYTAIA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RFRYPERPII MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- I3MAR1_ICTTR/188-509 6.9e-14 37_[1]_275 F6SSF6_XENTR/208-529 6.9e-14 37_[1]_275 G3NMF6_GASAC/185-508 6.9e-14 37_[1]_277 U3K8E4_FICAL/69-390 6.9e-14 37_[1]_275 H2SHS4_TAKRU/214-535 6.9e-14 37_[1]_275 H2Y561_CIOSA/165-484 6.9e-14 37_[1]_273 H2YBE7_CIOSA/188-508 6.9e-14 37_[1]_274 W5QC50_SHEEP/110-421 6.9e-14 37_[1]_265 B7PAJ1_IXOSC/186-494 6.9e-14 37_[1]_262 A0A7M7GNW6_STRPU/216-549 6.9e-14 37_[1]_287 A7SKM6_NEMVE/199-530 6.9e-14 37_[1]_285 B7PFK7_IXOSC/229-563 6.9e-14 37_[1]_288 A0A212ETU9_DANPL/2-331 6.9e-14 37_[1]_283 A0A2A3EBH9_APICC/227-562 6.9e-14 37_[1]_289 A0A8R2A6A8_ACYPI/255-575 6.9e-14 37_[1]_274 D6WJY3_TRICA/215-541 6.9e-14 37_[1]_280 G3P0Z0_GASAC/40-360 6.9e-14 37_[1]_274 A7SCF4_NEMVE/210-527 1.3e-13 37_[1]_271 G3NBP6_GASAC/213-529 1.3e-13 37_[1]_270 H2L9W7_ORYLA/224-534 1.3e-13 37_[1]_264 F7CDC6_MONDO/270-622 1.3e-13 37_[1]_306 A7S003_NEMVE/211-518 1.3e-13 37_[1]_261 L5K680_PTEAL/177-499 1.6e-13 37_[1]_276 A3QK10_DANRE/217-537 1.6e-13 37_[1]_274 H2YB72_CIOSA/200-525 2.3e-13 37_[1]_279 F6S8I5_CIOIN/240-572 2.3e-13 37_[1]_286 E2ABY3_CAMFO/213-531 2.3e-13 37_[1]_272 T1I187_RHOPR/159-463 2.3e-13 37_[1]_258 E0V9Z7_PEDHC/160-477 3.1e-13 37_[1]_271 T1G984_HELRO/142-468 4.3e-13 37_[1]_280 E0VGL1_PEDHC/204-525 4.3e-13 37_[1]_275 T1HKP7_RHOPR/236-541 4.3e-13 37_[1]_259 D6WG76_TRICA/231-540 4.3e-13 37_[1]_263 B4LDK8_DROVI/296-608 4.3e-13 37_[1]_266 F7AFK4_CIOIN/323-637 7.2e-13 37_[1]_268 E9FZ27_DAPPU/279-614 1e-12 37_[1]_289 H2Y9A5_CIOSA/181-504 1e-12 37_[1]_277 L9L1K9_TUPCH/203-534 1.3e-12 37_[1]_285 T1FXD5_HELRO/220-556 1.3e-12 37_[1]_290 E9G2J9_DAPPU/241-588 1.7e-12 37_[1]_301 E0VTY7_PEDHC/187-502 3.4e-12 39_[1]_267 E3LJT9_CAERE/219-529 4.3e-12 37_[1]_264 A7SZJ6_NEMVE/180-488 4.7e-12 37_[1]_262 A0A8R2B9L2_ACYPI/255-564 9.7e-12 37_[1]_263 B4HHP7_DROSE/237-568 1.9e-11 37_[1]_285 T1KSM5_TETUR/268-578 2.1e-11 37_[1]_264 T1JZ26_TETUR/239-549 2.1e-11 37_[1]_264 A0A1X7VRK9_AMPQE/246-571 6.1e-11 38_[1]_278 B3MR18_DROAN/239-540 6.7e-11 37_[1]_255 B4MT43_DROWI/197-499 6.7e-11 37_[1]_256 B3S9M8_TRIAD/25-355 8e-11 37_[1]_284 A0A1X7VJ12_AMPQE/189-505 1.2e-10 37_[1]_270 M4AZW4_XIPMA/212-532 1.8e-10 37_[1]_274 T1EGR1_HELRO/180-500 1.3e-09 37_[1]_274 A8WWU4_CAEBR/220-553 2e-09 37_[1]_287 H3CZ50_TETNG/209-524 2.1e-09 37_[1]_269 G0NVS5_CAEBE/194-508 8.4e-09 37_[1]_268 A0A2A6CS93_PRIPA/244-512 2.9e-08 37_[1]_222 T1KGR8_TETUR/210-542 4.1e-08 37_[1]_286 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RFRYPERPII MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RFRYPERPII width=10 seqs=59 I3MAR1_ICTTR/188-509 ( 38) RFRYPERPII 1 F6SSF6_XENTR/208-529 ( 38) RFRYPERPII 1 G3NMF6_GASAC/185-508 ( 38) RFRYPERPII 1 U3K8E4_FICAL/69-390 ( 38) RFRYPERPII 1 H2SHS4_TAKRU/214-535 ( 38) RFRYPERPII 1 H2Y561_CIOSA/165-484 ( 38) RFRYPERPII 1 H2YBE7_CIOSA/188-508 ( 38) RFRYPERPII 1 W5QC50_SHEEP/110-421 ( 38) RFRYPERPII 1 B7PAJ1_IXOSC/186-494 ( 38) RFRYPERPII 1 A0A7M7GNW6_STRPU/216-549 ( 38) RFRYPERPII 1 A7SKM6_NEMVE/199-530 ( 38) RFRYPERPII 1 B7PFK7_IXOSC/229-563 ( 38) RFRYPERPII 1 A0A212ETU9_DANPL/2-331 ( 38) RFRYPERPII 1 A0A2A3EBH9_APICC/227-562 ( 38) RFRYPERPII 1 A0A8R2A6A8_ACYPI/255-575 ( 38) RFRYPERPII 1 D6WJY3_TRICA/215-541 ( 38) RFRYPERPII 1 G3P0Z0_GASAC/40-360 ( 38) RFRYPERPII 1 A7SCF4_NEMVE/210-527 ( 38) RFKYPERPII 1 G3NBP6_GASAC/213-529 ( 38) RFKYPERPII 1 H2L9W7_ORYLA/224-534 ( 38) RFKYPERPII 1 F7CDC6_MONDO/270-622 ( 38) RFKYPERPII 1 A7S003_NEMVE/211-518 ( 38) RFKYPERPII 1 L5K680_PTEAL/177-499 ( 38) RFQYPERPII 1 A3QK10_DANRE/217-537 ( 38) RFQYPERPII 1 H2YB72_CIOSA/200-525 ( 38) RFRYPERPIV 1 F6S8I5_CIOIN/240-572 ( 38) RFRYPERPIV 1 E2ABY3_CAMFO/213-531 ( 38) RFRYPERPIV 1 T1I187_RHOPR/159-463 ( 38) RFRYPERPIV 1 E0V9Z7_PEDHC/160-477 ( 38) RFRYPERPVI 1 T1G984_HELRO/142-468 ( 38) RFEYPERPII 1 E0VGL1_PEDHC/204-525 ( 38) RFKYPERPIV 1 T1HKP7_RHOPR/236-541 ( 38) RFKYPERPIV 1 D6WG76_TRICA/231-540 ( 38) RFKYPERPIV 1 B4LDK8_DROVI/296-608 ( 38) RFKYPERPIV 1 F7AFK4_CIOIN/323-637 ( 38) RFAYPERPII 1 E9FZ27_DAPPU/279-614 ( 38) RFRYPERPLI 1 H2Y9A5_CIOSA/181-504 ( 38) RFMYPERPII 1 L9L1K9_TUPCH/203-534 ( 38) RFSYPERPII 1 T1FXD5_HELRO/220-556 ( 38) RFPYPERPII 1 E9G2J9_DAPPU/241-588 ( 38) RFRYPERPVV 1 E0VTY7_PEDHC/187-502 ( 40) RFRYPERPLV 1 E3LJT9_CAERE/219-529 ( 38) RFQYPERPIF 1 A7SZJ6_NEMVE/180-488 ( 38) RFKYPERSII 1 A0A8R2B9L2_ACYPI/255-564 ( 38) RFKYPEKPIV 1 B4HHP7_DROSE/237-568 ( 38) RFRYPERAIV 1 T1KSM5_TETUR/268-578 ( 38) RFCYPERSII 1 T1JZ26_TETUR/239-549 ( 38) RFCYPERSII 1 A0A1X7VRK9_AMPQE/246-571 ( 39) RYHYPERPVI 1 B3MR18_DROAN/239-540 ( 38) RFGYPERPVL 1 B4MT43_DROWI/197-499 ( 38) RFGYPERPVL 1 B3S9M8_TRIAD/25-355 ( 38) RFQYPERILI 1 A0A1X7VJ12_AMPQE/189-505 ( 38) RFEYPWRPII 1 M4AZW4_XIPMA/212-532 ( 38) RFVYPQRPII 1 T1EGR1_HELRO/180-500 ( 38) KFKYPEKPIA 1 A8WWU4_CAEBR/220-553 ( 38) RFAYPVRPIL 1 H3CZ50_TETNG/209-524 ( 38) RLAYPERPLL 1 G0NVS5_CAEBE/194-508 ( 38) RFRFPERCVF 1 A0A2A6CS93_PRIPA/244-512 ( 38) RFQYPESTSV 1 T1KGR8_TETUR/210-542 ( 38) RFSYPEKILK 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RFRYPERPII MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 10 n= 22197 bayes= 9.81589 E= 2.9e-404 -433 -443 -413 -442 -625 -473 -232 -526 -77 -513 -463 -301 -382 -211 435 -453 -452 -584 -511 -517 -435 -414 -428 -449 363 -539 -389 -374 -473 -220 -304 -409 -438 -429 -519 -433 -494 -398 -394 -85 -46 -12 -186 25 -533 -86 8 -478 232 -453 -63 -163 -88 202 317 -89 -287 -214 -591 -414 -770 -730 -700 -737 -170 -773 -384 -706 -701 -638 -618 -562 -722 -564 -680 -725 -728 -709 -484 455 -910 -916 -771 -886 -1002 -797 -787 -1072 -879 -986 -1012 -814 491 -807 -868 -921 -914 -1033 -976 -933 -516 -653 -128 475 -699 -525 -426 -589 -518 -668 -579 -339 -593 -206 -551 -564 -551 -461 -385 -627 -406 -416 -387 -416 -599 -448 -205 -499 -4 -487 -436 -274 -356 -184 431 -279 -426 -558 -484 -491 -177 -122 -353 -357 -604 -462 -389 -141 -356 -512 -478 -367 466 -299 -420 -69 -174 -491 -709 -588 -375 -453 -367 -392 -409 -504 -428 325 -370 -51 -151 -330 -458 -346 -444 -260 -336 54 -562 -404 -253 -432 -337 -363 -203 -475 -397 311 -193 -65 -123 -300 -430 -316 -414 -396 -310 101 -532 -375 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RFRYPERPII MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 10 nsites= 59 E= 2.9e-404 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.016949 0.000000 0.000000 0.000000 0.000000 0.000000 0.983051 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966102 0.000000 0.000000 0.000000 0.000000 0.016949 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.016949 0.050847 0.033898 0.000000 0.033898 0.000000 0.033898 0.016949 0.000000 0.203390 0.000000 0.016949 0.000000 0.016949 0.084746 0.457627 0.033898 0.000000 0.016949 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.016949 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.983051 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.949153 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.016949 0.000000 0.000000 0.000000 0.016949 0.016949 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.050847 0.000000 0.000000 0.000000 0.000000 0.000000 0.932203 0.016949 0.000000 0.000000 0.000000 0.000000 0.016949 0.016949 0.000000 0.000000 0.000000 0.000000 0.000000 0.033898 0.000000 0.000000 0.000000 0.000000 0.864407 0.000000 0.000000 0.050847 0.016949 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.796610 0.000000 0.084746 0.000000 0.000000 0.000000 0.000000 0.000000 0.016949 0.000000 0.101695 0.000000 0.000000 0.016949 0.000000 0.000000 0.000000 0.033898 0.000000 0.000000 0.644068 0.016949 0.067797 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.220339 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RFRYPERPII MEME-1 regular expression -------------------------------------------------------------------------------- RF[RK]YPERPI[IV] -------------------------------------------------------------------------------- Time 7.36 secs. ******************************************************************************** ******************************************************************************** MOTIF YFHLAAWSIP MEME-2 width = 10 sites = 71 llr = 1469 E-value = 3.6e-368 ******************************************************************************** -------------------------------------------------------------------------------- Motif YFHLAAWSIP MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::148:2:: pos.-specific C :::::::1:: probability D :::::::::: matrix E :::::::::: F :9:::::::: G :::1:::2:: H ::a::::::: I :::12:::5: K :::::::::: L 1::51::23: M :::1:::::: N :::::::::: P :::::::::a Q :::::::::: R :::::::::: S :::::1:2:: T :::::::1:: V :::13:::2: W 1:::::a::: Y 71:::::::: bits 5.8 * 5.2 * 4.6 * * * 4.1 * * * Relative 3.5 ** * * Entropy 2.9 *** ** * (29.9 bits) 2.3 *** ** * 1.7 *** ** ** 1.2 ********** 0.6 ********** 0.0 ---------- Multilevel YFHLAAWGIP consensus V SL sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YFHLAAWSIP MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------- D6WJY3_TRICA/215-541 141 9.13e-13 GHEAIEANSQ YFHLAAWAIP AVKTITILAM H2Y561_CIOSA/165-484 137 1.71e-12 SHEAIERHSS YFHLVAWSIP SIKIVVILIL A3QK10_DANRE/217-537 136 1.71e-12 GHEAIEAHSS YFHMAAWGIP AVKTIVILTM H2YBE7_CIOSA/188-508 137 1.71e-12 GHEAIEAYGF YFHLAAWLIP AVQTISALVL G3NBP6_GASAC/213-529 140 1.71e-12 GSEAIAGYSQ YFHLAAWLIP SVKTIVVLAL W5QC50_SHEEP/110-421 134 1.71e-12 GNEAIAGYAQ YFHLAAWLIP SVKSITALAL A0A8R2B9L2_ACYPI/255-564 133 1.71e-12 GNEAIASYSQ YFHLAAWLIP TVKSLGVLVM E0VGL1_PEDHC/204-525 132 1.71e-12 GNEAIAGYSQ YFHLAAWLIP TVKSIAVLVM B4LDK8_DROVI/296-608 132 1.71e-12 GNEAITKHSQ YFHLAAWLIP TVQSVAVLLL B7PFK7_IXOSC/229-563 144 2.11e-12 GHEAIESNSQ YFHLAAWTIP AVKTITILAM E9FZ27_DAPPU/279-614 152 5.06e-12 GSEAIARCSP YFHLVAWTIP AVQTAAALLM T1JZ26_TETUR/239-549 134 7.68e-12 TAEAINDYSP YFHMIAWGIP FMKTCLVIFM F4WKG2_ACREC/224-548 138 7.68e-12 IQDRIDKKSA YFHLIAWCIP LVLTVAIMAL F7AFK4_CIOIN/323-637 134 9.89e-12 GSEAIASYSQ YFHAAAWLIP ALKSITVLAM A0A212ETU9_DANPL/2-331 144 9.89e-12 GHEAIEANSQ YFHLAAWAVP AIKTISILAM H3CZ50_TETNG/209-524 137 9.89e-12 SPEAIAGRSA YFHLAAWAVP ALQTATVLAT G3P0Z0_GASAC/40-360 137 9.89e-12 GHEAIEAHSQ YFHLAAWAVP AVKTISILAI A0A8R1W5X2_ACYPI/202-528 138 1.18e-11 IQEKVDKKGG YFHLLAWSIP LVFCVVVMVL L9L1K9_TUPCH/203-534 137 1.18e-11 GHEAIEMHSS YFHIAAWAIP AVKTIVILIM D6WG76_TRICA/231-540 132 1.18e-11 GNEAIASYAE YFHVAAWLIP TLQTVAVFVS H2Y9A5_CIOSA/181-504 136 1.18e-11 GNEAIEAKSP YFHGAAWSIP AIQTIVVLIS B4Q616_DROSI/244-568 137 1.45e-11 VQDRIDKKGS YFHLVAWSLP LVLTITTMAF E0VGP6_PEDHC/215-541 139 1.45e-11 IQERIDKKGA YFHLVAWSLP VVLTITVMAS T1HLP2_RHOPR/168-495 139 1.45e-11 IQECMEKKGA YFHLVAWSLP LVLTITTMAL L5K680_PTEAL/177-499 136 1.45e-11 GHEAIEAHGS YFHMAAWGLP ALKTIVILTL F7CDC6_MONDO/270-622 173 1.45e-11 GNEAIAGYSQ YFHLAAWLVP SVKSIAVLAL M4AZW4_XIPMA/212-532 137 1.45e-11 SHEAIQARSQ YFHLAAWLVP ALKTVLVLAV A0A8R2A6A8_ACYPI/255-575 132 1.73e-11 GHEAIEANSH YFHLAAWTVP AAKTITVLAM D6WXL7_TRICA/208-536 141 2.37e-11 IQERVDKKRV YFHLIAWSLP LMFTITTMAV B0W046_CULQU/239-567 140 2.37e-11 GKDRIDKKGS YFHLIAWSLP LVLTITIMAL T1FXD5_HELRO/220-556 145 2.37e-11 GQEALNKNSH YFHLIAWSLP AVQVIAILAL A0A7M7GNW6_STRPU/216-549 137 2.37e-11 GHEAIERNSQ YFHFAAWSIP AGKTIGVLAT B7Q4R2_IXOSC/152-491 140 4.14e-11 PRESLDAKAA YFHLIAWCVP FVLTITVMAL T1KSM5_TETUR/268-578 134 6.19e-11 TVEIINDYSI YFHFIAWSIP AVKSYLAITM H2L9W7_ORYLA/224-534 136 6.19e-11 GNEAIGSYSQ HFHLAAWLIP SMKSIAVLAL E9GI97_DAPPU/225-556 139 8.15e-11 IREKVSSKAA YFHLVSWSIP LVLTITCMAL A7S003_NEMVE/211-518 133 8.15e-11 SSEAITNYSQ YFHAVAWLVP AIQAIAVLAM A7SCF4_NEMVE/210-527 137 9.30e-11 GQEAIERKAT YFHAVAWTVP AIQTIMALIM B7PAJ1_IXOSC/186-494 133 9.30e-11 GNEAIAGYSQ YFHIVAWAVP TIKTIVAVLL A0A6I8RRT2_XENTR/194-525 139 1.34e-10 THQPLSGKTS YFHLITWSIP FVLTVAILAV I3MAR1_ICTTR/188-509 138 1.34e-10 SCEAIEQKAV WFHAVAWGIP GFLTVMLLAM A7SKM6_NEMVE/199-530 137 1.34e-10 GQEAIEANSQ FFHLAAWAIP AVKTIAILLM A0A2A3EBH9_APICC/227-562 143 1.49e-10 GHEAIEANSQ YFHLAAWAAP AIKTVTILAM T1I187_RHOPR/159-463 137 1.70e-10 SSEALYGLAT YFHMAAWAGP AIAALMALTL T1HKP7_RHOPR/236-541 132 1.70e-10 GNEAIASYSQ YFHLFAWLVP TVMSVGVLVM F6SSF6_XENTR/208-529 138 2.41e-10 SCEAIEQKSL WFHGVAWGIP GILTIILLAM E0V9Z7_PEDHC/160-477 137 3.47e-10 SSEALHGLAS YFHVAAWTGP AVLGIVALAL E9G2J9_DAPPU/241-588 146 3.90e-10 GHEPIEAKSH YFHLVTWALP AALTIAILAM B4HHP7_DROSE/237-568 145 4.34e-10 GHEAIENKSH LFHLVAWAVP ALQTISVLAL H2SHS4_TAKRU/214-535 138 6.67e-10 GSEAIEKKAL LFHAVAWGLP GALTVALLAL H2YB72_CIOSA/200-525 137 7.48e-10 GSEAIEKYSH YYHGLAWGIP AIQTMIVITS F6S8I5_CIOIN/240-572 142 7.48e-10 GSEAIEKHHL YYHGLAWGIP AVQTMVVVTT T1KGR8_TETUR/210-542 144 7.48e-10 GREAFERISI WFHVFAWGIP SLDAIRILAM A0A0G2JYI3_RAT/225-556 139 8.30e-10 TYQPLSGKTS YFHLLTWSLP FVLTVAILAV G3NMF6_GASAC/185-508 137 9.27e-10 SCEAIEKKAV WFHSVAWGIP GALTVMLLAL A7S829_NEMVE/175-502 139 1.26e-09 TRDNFAGKTG YFHIISWSLP AVLTGCVLLV A8WWU4_CAEBR/220-553 136 1.26e-09 GAESIAALSP YFHAMCWGIP AVLSVTVLVT T1G984_HELRO/142-468 137 1.68e-09 SREALQKANN YFHVISWTLP AVLTTIVLTM U3K8E4_FICAL/69-390 138 2.23e-09 GSEAIEKKAL LFHASAWGIP GTLTIILLAM E0VTY7_PEDHC/187-502 141 2.23e-09 AHERIQQHSS LFHLAGWGLP AVQTIAVLVL A7SZJ6_NEMVE/180-488 138 4.59e-09 GCEAIGSYAK LFHIIAWILP CIKTIFILIT E2ABY3_CAMFO/213-531 138 4.59e-09 SSEALHNIAP YLHAAAWILP ILFTGGGLLS E3LJT9_CAERE/219-529 133 8.33e-09 SPEAISSFSF HFHVVGWCLP AIQTVLVIVF A0A1X7VRK9_AMPQE/246-571 148 1.48e-08 GEEAVERPWL LYHIFAWCIP AILVILLLSV B3MR18_DROAN/239-540 137 1.48e-08 SSEALEKRSG LFHVLAWVPP LAPPIAALLL B4MT43_DROWI/197-499 134 1.48e-08 SSEALEKHSG LFHVLAWVPP LAPPIAALLL T1EGR1_HELRO/180-500 139 1.74e-08 GEEVLVSLSW FFHILAWGFP AGIVALAIVT A0A1X7VJ12_AMPQE/189-505 136 2.22e-08 SNESVGRLAP FFHVTAWVVP LLMMISLVAA A0A2A6CS93_PRIPA/244-512 92 2.40e-08 SSEAIANCSL RFHAVGWLLP SAQTVIVIIF B3S9M8_TRIAD/25-355 141 3.79e-08 CSEIITGYAV YYHTLSWIIP AVPVAVIILW G0NVS5_CAEBE/194-508 137 1.48e-07 VPEGIEACSS YVHFVAWGLS SLATIIVLIF -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YFHLAAWSIP MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- D6WJY3_TRICA/215-541 9.1e-13 140_[2]_177 H2Y561_CIOSA/165-484 1.7e-12 136_[2]_174 A3QK10_DANRE/217-537 1.7e-12 135_[2]_176 H2YBE7_CIOSA/188-508 1.7e-12 136_[2]_175 G3NBP6_GASAC/213-529 1.7e-12 139_[2]_168 W5QC50_SHEEP/110-421 1.7e-12 133_[2]_169 A0A8R2B9L2_ACYPI/255-564 1.7e-12 132_[2]_168 E0VGL1_PEDHC/204-525 1.7e-12 131_[2]_181 B4LDK8_DROVI/296-608 1.7e-12 131_[2]_172 B7PFK7_IXOSC/229-563 2.1e-12 143_[2]_182 E9FZ27_DAPPU/279-614 5.1e-12 151_[2]_175 T1JZ26_TETUR/239-549 7.7e-12 133_[2]_168 F4WKG2_ACREC/224-548 7.7e-12 137_[2]_178 F7AFK4_CIOIN/323-637 9.9e-12 133_[2]_172 A0A212ETU9_DANPL/2-331 9.9e-12 143_[2]_177 H3CZ50_TETNG/209-524 9.9e-12 136_[2]_170 G3P0Z0_GASAC/40-360 9.9e-12 136_[2]_175 A0A8R1W5X2_ACYPI/202-528 1.2e-11 137_[2]_180 L9L1K9_TUPCH/203-534 1.2e-11 136_[2]_186 D6WG76_TRICA/231-540 1.2e-11 131_[2]_169 H2Y9A5_CIOSA/181-504 1.2e-11 135_[2]_179 B4Q616_DROSI/244-568 1.5e-11 136_[2]_179 E0VGP6_PEDHC/215-541 1.5e-11 138_[2]_179 T1HLP2_RHOPR/168-495 1.5e-11 138_[2]_180 L5K680_PTEAL/177-499 1.5e-11 135_[2]_178 F7CDC6_MONDO/270-622 1.5e-11 172_[2]_171 M4AZW4_XIPMA/212-532 1.5e-11 136_[2]_175 A0A8R2A6A8_ACYPI/255-575 1.7e-11 131_[2]_180 D6WXL7_TRICA/208-536 2.4e-11 140_[2]_179 B0W046_CULQU/239-567 2.4e-11 139_[2]_180 T1FXD5_HELRO/220-556 2.4e-11 144_[2]_183 A0A7M7GNW6_STRPU/216-549 2.4e-11 136_[2]_188 B7Q4R2_IXOSC/152-491 4.1e-11 139_[2]_191 T1KSM5_TETUR/268-578 6.2e-11 133_[2]_168 H2L9W7_ORYLA/224-534 6.2e-11 135_[2]_166 E9GI97_DAPPU/225-556 8.2e-11 138_[2]_184 A7S003_NEMVE/211-518 8.2e-11 132_[2]_166 A7SCF4_NEMVE/210-527 9.3e-11 136_[2]_172 B7PAJ1_IXOSC/186-494 9.3e-11 132_[2]_167 A0A6I8RRT2_XENTR/194-525 1.3e-10 138_[2]_184 I3MAR1_ICTTR/188-509 1.3e-10 137_[2]_175 A7SKM6_NEMVE/199-530 1.3e-10 136_[2]_186 A0A2A3EBH9_APICC/227-562 1.5e-10 142_[2]_184 T1I187_RHOPR/159-463 1.7e-10 136_[2]_159 T1HKP7_RHOPR/236-541 1.7e-10 131_[2]_165 F6SSF6_XENTR/208-529 2.4e-10 137_[2]_175 E0V9Z7_PEDHC/160-477 3.5e-10 136_[2]_172 E9G2J9_DAPPU/241-588 3.9e-10 145_[2]_193 B4HHP7_DROSE/237-568 4.3e-10 144_[2]_178 H2SHS4_TAKRU/214-535 6.7e-10 137_[2]_175 H2YB72_CIOSA/200-525 7.5e-10 136_[2]_180 F6S8I5_CIOIN/240-572 7.5e-10 141_[2]_182 T1KGR8_TETUR/210-542 7.5e-10 143_[2]_180 A0A0G2JYI3_RAT/225-556 8.3e-10 138_[2]_184 G3NMF6_GASAC/185-508 9.3e-10 136_[2]_178 A7S829_NEMVE/175-502 1.3e-09 138_[2]_180 A8WWU4_CAEBR/220-553 1.3e-09 135_[2]_189 T1G984_HELRO/142-468 1.7e-09 136_[2]_181 U3K8E4_FICAL/69-390 2.2e-09 137_[2]_175 E0VTY7_PEDHC/187-502 2.2e-09 140_[2]_166 A7SZJ6_NEMVE/180-488 4.6e-09 137_[2]_162 E2ABY3_CAMFO/213-531 4.6e-09 137_[2]_172 E3LJT9_CAERE/219-529 8.3e-09 132_[2]_169 A0A1X7VRK9_AMPQE/246-571 1.5e-08 147_[2]_169 B3MR18_DROAN/239-540 1.5e-08 136_[2]_156 B4MT43_DROWI/197-499 1.5e-08 133_[2]_160 T1EGR1_HELRO/180-500 1.7e-08 138_[2]_173 A0A1X7VJ12_AMPQE/189-505 2.2e-08 135_[2]_172 A0A2A6CS93_PRIPA/244-512 2.4e-08 91_[2]_168 B3S9M8_TRIAD/25-355 3.8e-08 140_[2]_181 G0NVS5_CAEBE/194-508 1.5e-07 136_[2]_169 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YFHLAAWSIP MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YFHLAAWSIP width=10 seqs=71 D6WJY3_TRICA/215-541 ( 141) YFHLAAWAIP 1 H2Y561_CIOSA/165-484 ( 137) YFHLVAWSIP 1 A3QK10_DANRE/217-537 ( 136) YFHMAAWGIP 1 H2YBE7_CIOSA/188-508 ( 137) YFHLAAWLIP 1 G3NBP6_GASAC/213-529 ( 140) YFHLAAWLIP 1 W5QC50_SHEEP/110-421 ( 134) YFHLAAWLIP 1 A0A8R2B9L2_ACYPI/255-564 ( 133) YFHLAAWLIP 1 E0VGL1_PEDHC/204-525 ( 132) YFHLAAWLIP 1 B4LDK8_DROVI/296-608 ( 132) YFHLAAWLIP 1 B7PFK7_IXOSC/229-563 ( 144) YFHLAAWTIP 1 E9FZ27_DAPPU/279-614 ( 152) YFHLVAWTIP 1 T1JZ26_TETUR/239-549 ( 134) YFHMIAWGIP 1 F4WKG2_ACREC/224-548 ( 138) YFHLIAWCIP 1 F7AFK4_CIOIN/323-637 ( 134) YFHAAAWLIP 1 A0A212ETU9_DANPL/2-331 ( 144) YFHLAAWAVP 1 H3CZ50_TETNG/209-524 ( 137) YFHLAAWAVP 1 G3P0Z0_GASAC/40-360 ( 137) YFHLAAWAVP 1 A0A8R1W5X2_ACYPI/202-528 ( 138) YFHLLAWSIP 1 L9L1K9_TUPCH/203-534 ( 137) YFHIAAWAIP 1 D6WG76_TRICA/231-540 ( 132) YFHVAAWLIP 1 H2Y9A5_CIOSA/181-504 ( 136) YFHGAAWSIP 1 B4Q616_DROSI/244-568 ( 137) YFHLVAWSLP 1 E0VGP6_PEDHC/215-541 ( 139) YFHLVAWSLP 1 T1HLP2_RHOPR/168-495 ( 139) YFHLVAWSLP 1 L5K680_PTEAL/177-499 ( 136) YFHMAAWGLP 1 F7CDC6_MONDO/270-622 ( 173) YFHLAAWLVP 1 M4AZW4_XIPMA/212-532 ( 137) YFHLAAWLVP 1 A0A8R2A6A8_ACYPI/255-575 ( 132) YFHLAAWTVP 1 D6WXL7_TRICA/208-536 ( 141) YFHLIAWSLP 1 B0W046_CULQU/239-567 ( 140) YFHLIAWSLP 1 T1FXD5_HELRO/220-556 ( 145) YFHLIAWSLP 1 A0A7M7GNW6_STRPU/216-549 ( 137) YFHFAAWSIP 1 B7Q4R2_IXOSC/152-491 ( 140) YFHLIAWCVP 1 T1KSM5_TETUR/268-578 ( 134) YFHFIAWSIP 1 H2L9W7_ORYLA/224-534 ( 136) HFHLAAWLIP 1 E9GI97_DAPPU/225-556 ( 139) YFHLVSWSIP 1 A7S003_NEMVE/211-518 ( 133) YFHAVAWLVP 1 A7SCF4_NEMVE/210-527 ( 137) YFHAVAWTVP 1 B7PAJ1_IXOSC/186-494 ( 133) YFHIVAWAVP 1 A0A6I8RRT2_XENTR/194-525 ( 139) YFHLITWSIP 1 I3MAR1_ICTTR/188-509 ( 138) WFHAVAWGIP 1 A7SKM6_NEMVE/199-530 ( 137) FFHLAAWAIP 1 A0A2A3EBH9_APICC/227-562 ( 143) YFHLAAWAAP 1 T1I187_RHOPR/159-463 ( 137) YFHMAAWAGP 1 T1HKP7_RHOPR/236-541 ( 132) YFHLFAWLVP 1 F6SSF6_XENTR/208-529 ( 138) WFHGVAWGIP 1 E0V9Z7_PEDHC/160-477 ( 137) YFHVAAWTGP 1 E9G2J9_DAPPU/241-588 ( 146) YFHLVTWALP 1 B4HHP7_DROSE/237-568 ( 145) LFHLVAWAVP 1 H2SHS4_TAKRU/214-535 ( 138) LFHAVAWGLP 1 H2YB72_CIOSA/200-525 ( 137) YYHGLAWGIP 1 F6S8I5_CIOIN/240-572 ( 142) YYHGLAWGIP 1 T1KGR8_TETUR/210-542 ( 144) WFHVFAWGIP 1 A0A0G2JYI3_RAT/225-556 ( 139) YFHLLTWSLP 1 G3NMF6_GASAC/185-508 ( 137) WFHSVAWGIP 1 A7S829_NEMVE/175-502 ( 139) YFHIISWSLP 1 A8WWU4_CAEBR/220-553 ( 136) YFHAMCWGIP 1 T1G984_HELRO/142-468 ( 137) YFHVISWTLP 1 U3K8E4_FICAL/69-390 ( 138) LFHASAWGIP 1 E0VTY7_PEDHC/187-502 ( 141) LFHLAGWGLP 1 A7SZJ6_NEMVE/180-488 ( 138) LFHIIAWILP 1 E2ABY3_CAMFO/213-531 ( 138) YLHAAAWILP 1 E3LJT9_CAERE/219-529 ( 133) HFHVVGWCLP 1 A0A1X7VRK9_AMPQE/246-571 ( 148) LYHIFAWCIP 1 B3MR18_DROAN/239-540 ( 137) LFHVLAWVPP 1 B4MT43_DROWI/197-499 ( 134) LFHVLAWVPP 1 T1EGR1_HELRO/180-500 ( 139) FFHILAWGFP 1 A0A1X7VJ12_AMPQE/189-505 ( 136) FFHVTAWVVP 1 A0A2A6CS93_PRIPA/244-512 ( 92) RFHAVGWLLP 1 B3S9M8_TRIAD/25-355 ( 141) YYHTLSWIIP 1 G0NVS5_CAEBE/194-508 ( 137) YVHFVAWGLS 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YFHLAAWSIP MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 10 n= 22197 bayes= 8.4026 E= 3.6e-368 -763 -735 -704 -732 -64 -786 69 -710 -701 -6 -621 -568 -730 -570 -169 -725 -730 -711 68 416 -422 -401 -417 -437 358 -528 -406 -361 -463 -225 -292 -403 -426 -425 -513 -421 -483 -269 -395 3 -989 -952 -809 -940 -1028 -831 581 -1125 -931 -1029 -1066 -855 -818 -856 -909 -983 -968 -1090 -1003 -950 69 -438 -499 -453 -79 -22 -397 18 -440 203 107 -393 -475 -365 -466 -218 -170 44 -555 -420 230 -441 -506 -461 -78 -513 -404 99 -448 0 -64 -399 -483 -375 -475 -218 -169 154 -561 -426 345 -120 -482 -474 -617 -59 -507 -547 -497 -550 -451 -436 -528 -439 -525 -36 -53 -393 -686 -610 -964 -933 -795 -912 -928 -822 -805 -1077 -904 -964 -989 -832 -810 -829 -885 -961 -945 -1039 483 -870 101 70 -526 -485 -467 168 -430 -71 -474 74 -303 -418 -494 -397 -499 143 52 -79 -589 -455 -219 -473 -483 -471 -230 -132 -446 266 -455 98 -253 -409 -43 -400 -500 -473 -381 108 -595 -453 -593 -782 -622 -648 -865 -690 -653 -830 -647 -793 -765 -638 488 -586 -696 -236 -671 -775 -921 -832 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YFHLAAWSIP MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 10 nsites= 71 E= 3.6e-368 0.000000 0.000000 0.000000 0.000000 0.042254 0.000000 0.028169 0.000000 0.000000 0.112676 0.000000 0.000000 0.000000 0.000000 0.014085 0.000000 0.000000 0.000000 0.056338 0.746479 0.000000 0.000000 0.000000 0.000000 0.915493 0.000000 0.000000 0.000000 0.000000 0.014085 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014085 0.000000 0.056338 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.126761 0.000000 0.000000 0.000000 0.042254 0.056338 0.000000 0.084507 0.000000 0.492958 0.056338 0.000000 0.000000 0.000000 0.000000 0.014085 0.014085 0.112676 0.000000 0.000000 0.394366 0.000000 0.000000 0.000000 0.042254 0.000000 0.000000 0.154930 0.000000 0.112676 0.014085 0.000000 0.000000 0.000000 0.000000 0.014085 0.014085 0.253521 0.000000 0.000000 0.845070 0.014085 0.000000 0.000000 0.000000 0.042254 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.056338 0.042254 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.154930 0.056338 0.000000 0.000000 0.000000 0.211268 0.000000 0.042254 0.000000 0.197183 0.000000 0.000000 0.000000 0.000000 0.000000 0.211268 0.084507 0.042254 0.000000 0.000000 0.014085 0.000000 0.000000 0.000000 0.014085 0.028169 0.000000 0.478873 0.000000 0.253521 0.000000 0.000000 0.028169 0.000000 0.000000 0.000000 0.000000 0.183099 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.985915 0.000000 0.000000 0.014085 0.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YFHLAAWSIP MEME-2 regular expression -------------------------------------------------------------------------------- YFHL[AV]AW[GS][IL]P -------------------------------------------------------------------------------- Time 14.02 secs. ******************************************************************************** ******************************************************************************** MOTIF VDGDELTGIC MEME-3 width = 10 sites = 71 llr = 1423 E-value = 3.7e-341 ******************************************************************************** -------------------------------------------------------------------------------- Motif VDGDELTGIC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :11:::2::: pos.-specific C :::::::::a probability D :6:8:::::: matrix E :3::3::::: F :::::::::: G ::8::::a:: H :::::::::: I 3::::2::4: K :::::::::: L :::::5::2: M :::::::::: N :::11::::: P ::::2::::: Q :::::::::: R :::::::::: S ::::2:3::: T ::::::4::: V 7:::12::4: W :::::::::: Y :::::::::: bits 5.8 5.2 4.6 * 4.1 * * * Relative 3.5 *** * * Entropy 2.9 *** * * (28.9 bits) 2.3 **** * * 1.7 ********** 1.2 ********** 0.6 ********** 0.0 ---------- Multilevel VDGDELTGIC consensus IE VS V sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VDGDELTGIC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------- H2YBE7_CIOSA/188-508 159 4.19e-13 QTISALVLGK VDGDELTGVC YIGNLDPESL A7SKM6_NEMVE/199-530 159 1.61e-12 KTIAILLMTK VDGDELSGVC YVGLSDVSAL A7SZJ6_NEMVE/180-488 160 4.94e-12 KTIFILITRK VDGDELTGLC FVGNQDLIAL H2Y561_CIOSA/165-484 159 4.94e-12 KIVVILILRH VDGDELTGLC YVGNQDMNAL B7Q4R2_IXOSC/152-491 168 6.10e-12 ALGKASHSLC VDGDPVSGIC FVTSANPIVR E3LJT9_CAERE/219-529 155 7.98e-12 QTVLVIVFNA IDGDPITGIC YVGNTDLQFQ G3NBP6_GASAC/213-529 162 1.40e-11 KTIVVLALGS VDGDPVAGIC YVGNQSLENL W5QC50_SHEEP/110-421 156 1.40e-11 KSITALALSS VDGDPVAGIC YVGNQNLNSL F7CDC6_MONDO/270-622 195 1.40e-11 KSIAVLALSS VDGDPVAGIC YVGNQSLDNL E0VGL1_PEDHC/204-525 154 1.40e-11 KSIAVLVMNA VDGDPVAGIC YVGNQNSDNL D6WG76_TRICA/231-540 154 1.40e-11 QTVAVFVSGA VDGDPVAGIC YVGNMNMENL A0A7M7GNW6_STRPU/216-549 159 1.40e-11 KTIGVLATGQ VDGDSLSGVC YTGIRDMNAL A7S003_NEMVE/211-518 155 1.66e-11 QAIAVLAMST IDGDPVSGIC YVGNHNLQSL F7AFK4_CIOIN/323-637 156 2.07e-11 KSITVLAMSS VDGDVLSGIC FVGNQSTKTL A0A0G2JYI3_RAT/225-556 161 2.36e-11 LTVAILAVAQ VDGDSVSGIC FVGYKNYRYR A0A6I8RRT2_XENTR/194-525 161 2.36e-11 LTVAILAVAQ VDGDSVSGIC FVGYKNYHYR E9FZ27_DAPPU/279-614 174 2.82e-11 QTAAALLMAA VDGDSLAGVC HVGVQQTALL A0A212ETU9_DANPL/2-331 166 2.82e-11 KTISILAMGK VDGDVLSGVC YVGLWDSEAL D6WJY3_TRICA/215-541 163 2.82e-11 KTITILAMGK VDGDVLSGVC YVGIWNVDAL A0A1X7VRK9_AMPQE/246-571 170 3.26e-11 LVILLLSVRL VDGDQLSGIC YTGNSSSVSM A0A2A6CS93_PRIPA/244-512 114 4.07e-11 QTVIVIIFNA IDGDPVTGLC YVGNTNVDHL T1KGR8_TETUR/210-542 166 4.48e-11 DAIRILAMKR IEGDPLSGVC YHNFWNREDY H2L9W7_ORYLA/224-534 158 6.00e-11 KSIAVLALSS VDGDSVAGVC YVGNQNLDSL B7PAJ1_IXOSC/186-494 155 6.00e-11 KTIVAVLLSA VDGDSVAGVC YVGNQDLANL H3CZ50_TETNG/209-524 159 6.80e-11 QTATVLATGQ VDGDLLTGVC YVGVSSVDAL I3MAR1_ICTTR/188-509 160 7.50e-11 LTVMLLAMNK VEGDNISGVC FVGLYDLDAS F6SSF6_XENTR/208-529 160 7.50e-11 LTIILLAMNK VEGDNISGVC FVGLYDQEVS G3NMF6_GASAC/185-508 159 7.50e-11 LTVMLLALNK VEGDNISGVC FVGLYDLDAL L9L1K9_TUPCH/203-534 159 9.19e-11 KTIVILIMRL VDADELTGLC YVGNQNLDAL A7SCF4_NEMVE/210-527 159 9.19e-11 QTIMALIMRK VDADELTGLC YVGNMDYENL A0A8R2A6A8_ACYPI/255-575 154 1.05e-10 KTITVLAMGK IEGDVLTGIC SMAVWSDDTA B7PFK7_IXOSC/229-563 166 1.19e-10 KTITILAMGK VEGDVLSGVC YVGLWNMDAL E9G2J9_DAPPU/241-588 168 1.19e-10 LTIAILAMGK VEGDVLSGVC SVGIWDMSAL U3K8E4_FICAL/69-390 160 1.44e-10 LTIILLAMNK IEGDNISGVC FVGLYDVDAL T1HLP2_RHOPR/168-495 161 1.60e-10 LTITTMALGE IDGDAVTGIC FVGSANKEYR E0VTY7_PEDHC/187-502 163 2.04e-10 QTIAVLVLRD VDADELTGTC YVGNQRTRSL A8WWU4_CAEBR/220-553 158 2.04e-10 LSVTVLVTNS VDGDVFTGIC SVGNLNPSAL D6WXL7_TRICA/208-536 163 2.27e-10 FTITTMAVGE IDGDYVTGIC FVGIFNFAAR T1HKP7_RHOPR/236-541 154 2.27e-10 MSVGVLVMSG VDGDPVGGIC YVGNTDPANL G3P0Z0_GASAC/40-360 159 2.27e-10 KTISILAIGQ IEGDVLSGVC FVSLGSLYPL A0A8R1W5X2_ACYPI/202-528 160 2.50e-10 FCVVVMVLGE IDGDSVTGTC FVGVNNKIYS H2YB72_CIOSA/200-525 159 2.50e-10 QTMIVITSGK IEGDNIAGVC FVGLYDSEGL F6S8I5_CIOIN/240-572 164 2.50e-10 QTMVVVTTGK IEGDNIAGVC FVGLYDSDGL L5K680_PTEAL/177-499 158 3.78e-10 KTIVILTLRK VAGDELTGLC YVASMDAAAL A3QK10_DANRE/217-537 158 3.78e-10 KTIVILTMRK VAGDELTGLC YVGSMDSSAL T1I187_RHOPR/159-463 159 3.78e-10 AALMALTLHR VAGDELTGLC KVSSDSTIWL B4LDK8_DROVI/296-608 154 4.18e-10 QSVAVLLLSA VDGDPILGIC YVGNLNPDHL A0A2A3EBH9_APICC/227-562 165 4.18e-10 KTVTILAMGK VEGDILSGVC YVGLWNVEAL B4HHP7_DROSE/237-568 167 4.18e-10 QTISVLALAK VEGDILSGVC FVGQLDTHSL M4AZW4_XIPMA/212-532 159 4.18e-10 KTVLVLAVGR VEGDLLSGVC SVGAYSLEGL T1G984_HELRO/142-468 159 5.49e-10 LTTIVLTMRR LDGDELTGLC FVGNQDMDSL T1FXD5_HELRO/220-556 167 5.49e-10 QVIAILALDK IEGDNLVGVC YVGVYDEKAL F4WKG2_ACREC/224-548 160 6.10e-10 LTVAIMALGR IDGNSITGIC FVGYADHMAK H2Y9A5_CIOSA/181-504 158 6.10e-10 QTIVVLISSK IEGDLLSGIC FVGVHNSKHL E0V9Z7_PEDHC/160-477 159 6.78e-10 LGIVALALRR IAGDELTGLC QVSDSDVLAF T1KSM5_TETUR/268-578 156 7.42e-10 KSYLAITMKA IDGEPLAGIC LVGNLNSQLL T1JZ26_TETUR/239-549 156 7.42e-10 KTCLVIFMQA IDGEPLAGIC FVGNLNSHLL H2SHS4_TAKRU/214-535 160 1.17e-09 LTVALLALNK IEGDGISGVC FIGLYDIDAL A0A8R2B9L2_ACYPI/255-564 155 1.66e-09 KSLGVLVMSA VDGDAFAGVC YVGNQNPDNL B4Q616_DROSI/244-568 159 3.34e-09 LTITTMAFSE VDGNSIVGIC FVGYINHSMR A7S829_NEMVE/175-502 161 3.63e-09 LTGCVLLVKQ VDANSISGIC FVGYKNPSMR E0VGP6_PEDHC/215-541 161 4.32e-09 LTITVMASRQ IDGNSMAGIC FVRSSYWGAR B3S9M8_TRIAD/25-355 163 4.32e-09 PVAVIILWKK VSADELTGLC YISSHLATQK E2ABY3_CAMFO/213-531 160 8.49e-09 FTGGGLLSHN VVADELTGLC QISDESALWL A0A1X7VJ12_AMPQE/189-505 158 1.28e-08 MMISLVAAQV ISADELTGTC FIVRDDSNAT G0NVS5_CAEBE/194-508 159 6.42e-08 ATIIVLIFNK VDASELTAIC SVGNLNSIAL T1EGR1_HELRO/180-500 161 8.60e-08 IVALAIVTRE INGDELIPIC RIGYSNTLSV B0W046_CULQU/239-567 162 9.25e-08 LTITIMALSE IDGNGTVGIC FVGYINHPIR B4MT43_DROWI/197-499 156 1.63e-07 PPIAALLLEK VHPSELTGMC MAPGFVEVPA B3MR18_DROAN/239-540 159 3.03e-07 PPIAALLLER VRPSELTGMC TAPGFVELPA E9GI97_DAPPU/225-556 161 3.47e-07 LTITCMALAQ VEAQSPHGIC FVANSKVVRS -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VDGDELTGIC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- H2YBE7_CIOSA/188-508 4.2e-13 158_[3]_153 A7SKM6_NEMVE/199-530 1.6e-12 158_[3]_164 A7SZJ6_NEMVE/180-488 4.9e-12 159_[3]_140 H2Y561_CIOSA/165-484 4.9e-12 158_[3]_152 B7Q4R2_IXOSC/152-491 6.1e-12 167_[3]_163 E3LJT9_CAERE/219-529 8e-12 154_[3]_147 G3NBP6_GASAC/213-529 1.4e-11 161_[3]_146 W5QC50_SHEEP/110-421 1.4e-11 155_[3]_147 F7CDC6_MONDO/270-622 1.4e-11 194_[3]_149 E0VGL1_PEDHC/204-525 1.4e-11 153_[3]_159 D6WG76_TRICA/231-540 1.4e-11 153_[3]_147 A0A7M7GNW6_STRPU/216-549 1.4e-11 158_[3]_166 A7S003_NEMVE/211-518 1.7e-11 154_[3]_144 F7AFK4_CIOIN/323-637 2.1e-11 155_[3]_150 A0A0G2JYI3_RAT/225-556 2.4e-11 160_[3]_162 A0A6I8RRT2_XENTR/194-525 2.4e-11 160_[3]_162 E9FZ27_DAPPU/279-614 2.8e-11 173_[3]_153 A0A212ETU9_DANPL/2-331 2.8e-11 165_[3]_155 D6WJY3_TRICA/215-541 2.8e-11 162_[3]_155 A0A1X7VRK9_AMPQE/246-571 3.3e-11 169_[3]_147 A0A2A6CS93_PRIPA/244-512 4.1e-11 113_[3]_146 T1KGR8_TETUR/210-542 4.5e-11 165_[3]_158 H2L9W7_ORYLA/224-534 6e-11 157_[3]_144 B7PAJ1_IXOSC/186-494 6e-11 154_[3]_145 H3CZ50_TETNG/209-524 6.8e-11 158_[3]_148 I3MAR1_ICTTR/188-509 7.5e-11 159_[3]_153 F6SSF6_XENTR/208-529 7.5e-11 159_[3]_153 G3NMF6_GASAC/185-508 7.5e-11 158_[3]_156 L9L1K9_TUPCH/203-534 9.2e-11 158_[3]_164 A7SCF4_NEMVE/210-527 9.2e-11 158_[3]_150 A0A8R2A6A8_ACYPI/255-575 1e-10 153_[3]_158 B7PFK7_IXOSC/229-563 1.2e-10 165_[3]_160 E9G2J9_DAPPU/241-588 1.2e-10 167_[3]_171 U3K8E4_FICAL/69-390 1.4e-10 159_[3]_153 T1HLP2_RHOPR/168-495 1.6e-10 160_[3]_158 E0VTY7_PEDHC/187-502 2e-10 162_[3]_144 A8WWU4_CAEBR/220-553 2e-10 157_[3]_167 D6WXL7_TRICA/208-536 2.3e-10 162_[3]_157 T1HKP7_RHOPR/236-541 2.3e-10 153_[3]_143 G3P0Z0_GASAC/40-360 2.3e-10 158_[3]_153 A0A8R1W5X2_ACYPI/202-528 2.5e-10 159_[3]_158 H2YB72_CIOSA/200-525 2.5e-10 158_[3]_158 F6S8I5_CIOIN/240-572 2.5e-10 163_[3]_160 L5K680_PTEAL/177-499 3.8e-10 157_[3]_156 A3QK10_DANRE/217-537 3.8e-10 157_[3]_154 T1I187_RHOPR/159-463 3.8e-10 158_[3]_137 B4LDK8_DROVI/296-608 4.2e-10 153_[3]_150 A0A2A3EBH9_APICC/227-562 4.2e-10 164_[3]_162 B4HHP7_DROSE/237-568 4.2e-10 166_[3]_156 M4AZW4_XIPMA/212-532 4.2e-10 158_[3]_153 T1G984_HELRO/142-468 5.5e-10 158_[3]_159 T1FXD5_HELRO/220-556 5.5e-10 166_[3]_161 F4WKG2_ACREC/224-548 6.1e-10 159_[3]_156 H2Y9A5_CIOSA/181-504 6.1e-10 157_[3]_157 E0V9Z7_PEDHC/160-477 6.8e-10 158_[3]_150 T1KSM5_TETUR/268-578 7.4e-10 155_[3]_146 T1JZ26_TETUR/239-549 7.4e-10 155_[3]_146 H2SHS4_TAKRU/214-535 1.2e-09 159_[3]_153 A0A8R2B9L2_ACYPI/255-564 1.7e-09 154_[3]_146 B4Q616_DROSI/244-568 3.3e-09 158_[3]_157 A7S829_NEMVE/175-502 3.6e-09 160_[3]_158 E0VGP6_PEDHC/215-541 4.3e-09 160_[3]_157 B3S9M8_TRIAD/25-355 4.3e-09 162_[3]_159 E2ABY3_CAMFO/213-531 8.5e-09 159_[3]_150 A0A1X7VJ12_AMPQE/189-505 1.3e-08 157_[3]_150 G0NVS5_CAEBE/194-508 6.4e-08 158_[3]_147 T1EGR1_HELRO/180-500 8.6e-08 160_[3]_151 B0W046_CULQU/239-567 9.3e-08 161_[3]_158 B4MT43_DROWI/197-499 1.6e-07 155_[3]_138 B3MR18_DROAN/239-540 3e-07 158_[3]_134 E9GI97_DAPPU/225-556 3.5e-07 160_[3]_162 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VDGDELTGIC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF VDGDELTGIC width=10 seqs=71 H2YBE7_CIOSA/188-508 ( 159) VDGDELTGVC 1 A7SKM6_NEMVE/199-530 ( 159) VDGDELSGVC 1 A7SZJ6_NEMVE/180-488 ( 160) VDGDELTGLC 1 H2Y561_CIOSA/165-484 ( 159) VDGDELTGLC 1 B7Q4R2_IXOSC/152-491 ( 168) VDGDPVSGIC 1 E3LJT9_CAERE/219-529 ( 155) IDGDPITGIC 1 G3NBP6_GASAC/213-529 ( 162) VDGDPVAGIC 1 W5QC50_SHEEP/110-421 ( 156) VDGDPVAGIC 1 F7CDC6_MONDO/270-622 ( 195) VDGDPVAGIC 1 E0VGL1_PEDHC/204-525 ( 154) VDGDPVAGIC 1 D6WG76_TRICA/231-540 ( 154) VDGDPVAGIC 1 A0A7M7GNW6_STRPU/216-549 ( 159) VDGDSLSGVC 1 A7S003_NEMVE/211-518 ( 155) IDGDPVSGIC 1 F7AFK4_CIOIN/323-637 ( 156) VDGDVLSGIC 1 A0A0G2JYI3_RAT/225-556 ( 161) VDGDSVSGIC 1 A0A6I8RRT2_XENTR/194-525 ( 161) VDGDSVSGIC 1 E9FZ27_DAPPU/279-614 ( 174) VDGDSLAGVC 1 A0A212ETU9_DANPL/2-331 ( 166) VDGDVLSGVC 1 D6WJY3_TRICA/215-541 ( 163) VDGDVLSGVC 1 A0A1X7VRK9_AMPQE/246-571 ( 170) VDGDQLSGIC 1 A0A2A6CS93_PRIPA/244-512 ( 114) IDGDPVTGLC 1 T1KGR8_TETUR/210-542 ( 166) IEGDPLSGVC 1 H2L9W7_ORYLA/224-534 ( 158) VDGDSVAGVC 1 B7PAJ1_IXOSC/186-494 ( 155) VDGDSVAGVC 1 H3CZ50_TETNG/209-524 ( 159) VDGDLLTGVC 1 I3MAR1_ICTTR/188-509 ( 160) VEGDNISGVC 1 F6SSF6_XENTR/208-529 ( 160) VEGDNISGVC 1 G3NMF6_GASAC/185-508 ( 159) VEGDNISGVC 1 L9L1K9_TUPCH/203-534 ( 159) VDADELTGLC 1 A7SCF4_NEMVE/210-527 ( 159) VDADELTGLC 1 A0A8R2A6A8_ACYPI/255-575 ( 154) IEGDVLTGIC 1 B7PFK7_IXOSC/229-563 ( 166) VEGDVLSGVC 1 E9G2J9_DAPPU/241-588 ( 168) VEGDVLSGVC 1 U3K8E4_FICAL/69-390 ( 160) IEGDNISGVC 1 T1HLP2_RHOPR/168-495 ( 161) IDGDAVTGIC 1 E0VTY7_PEDHC/187-502 ( 163) VDADELTGTC 1 A8WWU4_CAEBR/220-553 ( 158) VDGDVFTGIC 1 D6WXL7_TRICA/208-536 ( 163) IDGDYVTGIC 1 T1HKP7_RHOPR/236-541 ( 154) VDGDPVGGIC 1 G3P0Z0_GASAC/40-360 ( 159) IEGDVLSGVC 1 A0A8R1W5X2_ACYPI/202-528 ( 160) IDGDSVTGTC 1 H2YB72_CIOSA/200-525 ( 159) IEGDNIAGVC 1 F6S8I5_CIOIN/240-572 ( 164) IEGDNIAGVC 1 L5K680_PTEAL/177-499 ( 158) VAGDELTGLC 1 A3QK10_DANRE/217-537 ( 158) VAGDELTGLC 1 T1I187_RHOPR/159-463 ( 159) VAGDELTGLC 1 B4LDK8_DROVI/296-608 ( 154) VDGDPILGIC 1 A0A2A3EBH9_APICC/227-562 ( 165) VEGDILSGVC 1 B4HHP7_DROSE/237-568 ( 167) VEGDILSGVC 1 M4AZW4_XIPMA/212-532 ( 159) VEGDLLSGVC 1 T1G984_HELRO/142-468 ( 159) LDGDELTGLC 1 T1FXD5_HELRO/220-556 ( 167) IEGDNLVGVC 1 F4WKG2_ACREC/224-548 ( 160) IDGNSITGIC 1 H2Y9A5_CIOSA/181-504 ( 158) IEGDLLSGIC 1 E0V9Z7_PEDHC/160-477 ( 159) IAGDELTGLC 1 T1KSM5_TETUR/268-578 ( 156) IDGEPLAGIC 1 T1JZ26_TETUR/239-549 ( 156) IDGEPLAGIC 1 H2SHS4_TAKRU/214-535 ( 160) IEGDGISGVC 1 A0A8R2B9L2_ACYPI/255-564 ( 155) VDGDAFAGVC 1 B4Q616_DROSI/244-568 ( 159) VDGNSIVGIC 1 A7S829_NEMVE/175-502 ( 161) VDANSISGIC 1 E0VGP6_PEDHC/215-541 ( 161) IDGNSMAGIC 1 B3S9M8_TRIAD/25-355 ( 163) VSADELTGLC 1 E2ABY3_CAMFO/213-531 ( 160) VVADELTGLC 1 A0A1X7VJ12_AMPQE/189-505 ( 158) ISADELTGTC 1 G0NVS5_CAEBE/194-508 ( 159) VDASELTAIC 1 T1EGR1_HELRO/180-500 ( 161) INGDELIPIC 1 B0W046_CULQU/239-567 ( 162) IDGNGTVGIC 1 B4MT43_DROWI/197-499 ( 156) VHPSELTGMC 1 B3MR18_DROAN/239-540 ( 159) VRPSELTGMC 1 E9GI97_DAPPU/225-556 ( 161) VEAQSPHGIC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VDGDELTGIC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 10 n= 22197 bayes= 8.4026 E= 3.7e-341 -594 -622 -777 -776 -694 -850 -873 207 -792 -275 -496 -725 -790 -772 -878 -817 -585 295 -989 -782 -46 -777 451 281 -805 -515 -35 -712 -376 -699 -611 -45 -516 -269 -168 -138 -510 -260 -853 -662 61 -560 -402 -490 -739 375 -506 -700 -496 -723 -597 -365 -41 -480 -525 -423 -503 -607 -730 -657 -395 -518 503 -14 -565 -420 -278 -515 -386 -537 -457 107 -464 -121 -427 -162 -437 -489 -595 -467 -116 -517 -241 281 -513 -111 -267 -138 -206 -139 -338 202 244 -10 -295 110 -318 35 -596 -148 -503 -561 -627 -580 -135 -658 -533 109 -573 221 -68 -538 -128 -474 -587 -594 -196 135 -655 -541 126 -483 -472 -504 -575 -214 -42 -225 -459 -284 -387 -324 -505 -388 -498 207 273 -99 -666 -558 -214 -555 -306 -399 -672 392 -421 -632 -402 -664 -531 -276 -154 -407 -437 -396 -491 -573 -648 -575 -594 -625 -770 -761 -637 -831 -797 239 -770 54 9 -709 -769 -714 -831 -792 -47 205 -889 -734 -548 489 -576 -578 -722 -665 -578 -633 -636 -678 -575 -553 -628 -565 -621 -635 -560 -672 -823 -721 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VDGDELTGIC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 10 nsites= 71 E= 3.7e-341 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.323944 0.000000 0.014085 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.661972 0.000000 0.000000 0.056338 0.000000 0.605634 0.253521 0.000000 0.000000 0.014085 0.000000 0.000000 0.000000 0.000000 0.014085 0.000000 0.000000 0.014085 0.028169 0.000000 0.014085 0.000000 0.000000 0.126761 0.000000 0.000000 0.000000 0.000000 0.845070 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.028169 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.845070 0.028169 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.070423 0.000000 0.014085 0.000000 0.042254 0.000000 0.000000 0.000000 0.000000 0.028169 0.000000 0.000000 0.267606 0.000000 0.028169 0.000000 0.028169 0.000000 0.042254 0.000000 0.098592 0.197183 0.014085 0.000000 0.169014 0.000000 0.112676 0.000000 0.014085 0.000000 0.000000 0.000000 0.000000 0.028169 0.000000 0.000000 0.169014 0.000000 0.535211 0.014085 0.000000 0.014085 0.000000 0.000000 0.000000 0.014085 0.225352 0.000000 0.000000 0.197183 0.000000 0.000000 0.000000 0.000000 0.014085 0.014085 0.014085 0.000000 0.014085 0.000000 0.000000 0.000000 0.000000 0.000000 0.338028 0.366197 0.042254 0.000000 0.000000 0.014085 0.000000 0.000000 0.000000 0.000000 0.971831 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.014085 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.408451 0.000000 0.169014 0.028169 0.000000 0.000000 0.000000 0.000000 0.000000 0.042254 0.352113 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VDGDELTGIC MEME-3 regular expression -------------------------------------------------------------------------------- [VI][DE]GDE[LV][TS]G[IV]C -------------------------------------------------------------------------------- Time 20.43 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- A0A2A6CS93_PRIPA/244-512 4.62e-16 37_[1(2.89e-08)]_44_[2(2.40e-08)]_\ 12_[3(4.07e-11)]_146 E3LJT9_CAERE/219-529 1.17e-20 37_[1(4.33e-12)]_85_[2(8.33e-09)]_\ 12_[3(7.98e-12)]_147 A8WWU4_CAEBR/220-553 1.88e-17 37_[1(1.97e-09)]_88_[2(1.26e-09)]_\ 12_[3(2.04e-10)]_167 G0NVS5_CAEBE/194-508 1.38e-12 37_[1(8.43e-09)]_89_[2(1.48e-07)]_\ 12_[3(6.42e-08)]_147 T1EGR1_HELRO/180-500 4.41e-14 37_[1(1.32e-09)]_91_[2(1.74e-08)]_\ 12_[3(8.60e-08)]_151 H2Y9A5_CIOSA/181-504 3.76e-22 37_[1(9.97e-13)]_88_[2(1.18e-11)]_\ 12_[3(6.10e-10)]_157 G3P0Z0_GASAC/40-360 8.91e-24 37_[1(6.89e-14)]_89_[2(9.89e-12)]_\ 12_[3(2.27e-10)]_153 M4AZW4_XIPMA/212-532 4.53e-20 37_[1(1.76e-10)]_89_[2(1.45e-11)]_\ 12_[3(4.18e-10)]_153 H3CZ50_TETNG/209-524 5.71e-20 37_[1(2.12e-09)]_89_[2(9.89e-12)]_\ 12_[3(6.80e-11)]_148 B4HHP7_DROSE/237-568 1.53e-19 37_[1(1.88e-11)]_97_[2(4.34e-10)]_\ 12_[3(4.18e-10)]_156 D6WJY3_TRICA/215-541 1.24e-25 37_[1(6.89e-14)]_93_[2(9.13e-13)]_\ 12_[3(2.82e-11)]_155 A0A8R2A6A8_ACYPI/255-575 7.26e-24 37_[1(6.89e-14)]_84_[2(1.73e-11)]_\ 12_[3(1.05e-10)]_158 A0A2A3EBH9_APICC/227-562 2.53e-22 37_[1(6.89e-14)]_95_[2(1.49e-10)]_\ 12_[3(4.18e-10)]_9_[3(9.21e-05)]_143 A0A212ETU9_DANPL/2-331 1.29e-24 37_[1(6.89e-14)]_96_[2(9.89e-12)]_\ 12_[3(2.82e-11)]_9_[3(9.21e-05)]_136 E9G2J9_DAPPU/241-588 4.56e-21 37_[1(1.66e-12)]_98_[2(3.90e-10)]_\ 12_[3(1.19e-10)]_171 B7PFK7_IXOSC/229-563 1.21e-24 37_[1(6.89e-14)]_96_[2(2.11e-12)]_\ 12_[3(1.19e-10)]_160 A7SKM6_NEMVE/199-530 1.02e-24 37_[1(6.89e-14)]_89_[2(1.34e-10)]_\ 12_[3(1.61e-12)]_164 A0A7M7GNW6_STRPU/216-549 1.58e-24 37_[1(6.89e-14)]_89_[2(2.37e-11)]_\ 12_[3(1.40e-11)]_166 T1FXD5_HELRO/220-556 9.29e-22 37_[1(1.25e-12)]_97_[2(2.37e-11)]_\ 12_[3(5.49e-10)]_161 B4LDK8_DROVI/296-608 1.60e-23 37_[1(4.27e-13)]_84_[2(1.71e-12)]_\ 12_[3(4.18e-10)]_150 D6WG76_TRICA/231-540 3.78e-24 37_[1(4.27e-13)]_84_[2(1.18e-11)]_\ 12_[3(1.40e-11)]_147 T1HKP7_RHOPR/236-541 7.04e-22 37_[1(4.27e-13)]_84_[2(1.70e-10)]_\ 12_[3(2.27e-10)]_143 E0VGL1_PEDHC/204-525 6.51e-25 37_[1(4.27e-13)]_84_[2(1.71e-12)]_\ 12_[3(1.40e-11)]_159 A0A8R2B9L2_ACYPI/255-564 1.21e-21 37_[1(9.73e-12)]_85_[2(1.71e-12)]_\ 12_[3(1.66e-09)]_146 B7PAJ1_IXOSC/186-494 1.92e-23 37_[1(6.89e-14)]_85_[2(9.30e-11)]_\ 12_[3(6.00e-11)]_145 E9FZ27_DAPPU/279-614 9.44e-24 37_[1(9.97e-13)]_104_[2(5.06e-12)]_\ 12_[3(2.82e-11)]_153 A7S003_NEMVE/211-518 8.70e-24 37_[1(1.27e-13)]_85_[2(8.15e-11)]_\ 12_[3(1.66e-11)]_144 F7AFK4_CIOIN/323-637 8.02e-24 37_[1(7.15e-13)]_86_[2(9.89e-12)]_\ 12_[3(2.07e-11)]_150 F7CDC6_MONDO/270-622 2.10e-24 37_[1(1.27e-13)]_125_[2(1.45e-11)]_\ 12_[3(1.40e-11)]_149 H2L9W7_ORYLA/224-534 2.38e-23 37_[1(1.27e-13)]_88_[2(6.19e-11)]_\ 12_[3(6.00e-11)]_144 W5QC50_SHEEP/110-421 1.01e-25 37_[1(6.89e-14)]_86_[2(1.71e-12)]_\ 12_[3(1.40e-11)]_147 G3NBP6_GASAC/213-529 1.92e-25 37_[1(1.27e-13)]_92_[2(1.71e-12)]_\ 12_[3(1.40e-11)]_146 T1I187_RHOPR/159-463 6.37e-22 37_[1(2.34e-13)]_89_[2(1.70e-10)]_\ 12_[3(3.78e-10)]_137 E2ABY3_CAMFO/213-531 3.48e-19 37_[1(2.34e-13)]_90_[2(4.59e-09)]_\ 12_[3(8.49e-09)]_150 E0V9Z7_PEDHC/160-477 3.31e-21 37_[1(3.09e-13)]_89_[2(3.47e-10)]_\ 12_[3(6.78e-10)]_150 B4MT43_DROWI/197-499 3.48e-15 37_[1(6.71e-11)]_86_[2(1.48e-08)]_\ 12_[3(1.63e-07)]_138 B3MR18_DROAN/239-540 6.21e-15 37_[1(6.71e-11)]_89_[2(1.48e-08)]_\ 12_[3(3.03e-07)]_134 B3S9M8_TRIAD/25-355 4.10e-16 37_[1(7.99e-11)]_93_[2(3.79e-08)]_\ 12_[3(4.32e-09)]_159 A0A1X7VJ12_AMPQE/189-505 9.10e-16 37_[1(1.22e-10)]_88_[2(2.22e-08)]_\ 12_[3(1.28e-08)]_150 E0VTY7_PEDHC/187-502 6.13e-20 39_[1(3.39e-12)]_91_[2(2.23e-09)]_\ 12_[3(2.04e-10)]_144 T1G984_HELRO/142-468 1.83e-20 37_[1(4.27e-13)]_89_[2(1.68e-09)]_\ 12_[3(5.49e-10)]_159 A7SCF4_NEMVE/210-527 5.70e-23 37_[1(1.27e-13)]_89_[2(9.30e-11)]_\ 12_[3(9.19e-11)]_150 H2YBE7_CIOSA/188-508 3.65e-27 37_[1(6.89e-14)]_89_[2(1.71e-12)]_\ 12_[3(4.19e-13)]_153 A3QK10_DANRE/217-537 5.97e-24 37_[1(1.58e-13)]_88_[2(1.71e-12)]_\ 12_[3(3.78e-10)]_154 L5K680_PTEAL/177-499 4.81e-23 37_[1(1.58e-13)]_88_[2(1.45e-11)]_\ 12_[3(3.78e-10)]_156 L9L1K9_TUPCH/203-534 8.10e-23 37_[1(1.25e-12)]_89_[2(1.18e-11)]_\ 12_[3(9.19e-11)]_164 H2Y561_CIOSA/165-484 3.96e-26 37_[1(6.89e-14)]_89_[2(1.71e-12)]_\ 12_[3(4.94e-12)]_152 A7SZJ6_NEMVE/180-488 4.42e-21 37_[1(4.72e-12)]_90_[2(4.59e-09)]_\ 12_[3(4.94e-12)]_140 T1KGR8_TETUR/210-542 4.85e-17 37_[1(4.11e-08)]_96_[2(7.48e-10)]_\ 12_[3(4.48e-11)]_158 F6S8I5_CIOIN/240-572 2.32e-21 37_[1(2.34e-13)]_94_[2(7.48e-10)]_\ 12_[3(2.50e-10)]_160 H2YB72_CIOSA/200-525 2.18e-21 37_[1(2.34e-13)]_89_[2(7.48e-10)]_\ 12_[3(2.50e-10)]_158 H2SHS4_TAKRU/214-535 2.57e-21 37_[1(6.89e-14)]_90_[2(6.67e-10)]_\ 12_[3(1.17e-09)]_153 U3K8E4_FICAL/69-390 1.09e-21 37_[1(6.89e-14)]_90_[2(2.23e-09)]_\ 12_[3(1.44e-10)]_153 G3NMF6_GASAC/185-508 2.53e-22 37_[1(6.89e-14)]_89_[2(9.27e-10)]_\ 12_[3(7.50e-11)]_156 F6SSF6_XENTR/208-529 6.75e-23 37_[1(6.89e-14)]_90_[2(2.41e-10)]_\ 12_[3(7.50e-11)]_106_[1(9.55e-05)]_37 I3MAR1_ICTTR/188-509 3.83e-23 37_[1(6.89e-14)]_90_[2(1.34e-10)]_\ 12_[3(7.50e-11)]_153 A0A1X7VRK9_AMPQE/246-571 1.15e-18 38_[1(6.13e-11)]_99_[2(1.48e-08)]_\ 12_[3(3.26e-11)]_147 E9GI97_DAPPU/225-556 1.13e-10 138_[2(8.15e-11)]_12_[3(3.47e-07)]_\ 162 A0A8R1W5X2_ACYPI/202-528 2.27e-14 137_[2(1.18e-11)]_12_[3(2.50e-10)]_\ 158 T1HLP2_RHOPR/168-495 4.27e-14 138_[2(1.45e-11)]_12_[3(1.60e-10)]_\ 158 E0VGP6_PEDHC/215-541 4.82e-13 138_[2(1.45e-11)]_12_[3(4.32e-09)]_\ 157 F4WKG2_ACREC/224-548 7.53e-14 137_[2(7.68e-12)]_12_[3(6.10e-10)]_\ 156 B0W046_CULQU/239-567 2.55e-11 139_[2(2.37e-11)]_12_[3(9.25e-08)]_\ 83_[2(4.20e-05)]_65 B4Q616_DROSI/244-568 6.37e-13 136_[2(1.45e-11)]_12_[3(3.34e-09)]_\ 157 D6WXL7_TRICA/208-536 3.03e-14 140_[2(2.37e-11)]_12_[3(2.27e-10)]_\ 157 B7Q4R2_IXOSC/152-491 9.68e-15 139_[2(4.14e-11)]_18_[3(6.10e-12)]_\ 163 A7S829_NEMVE/175-502 3.21e-11 138_[2(1.26e-09)]_12_[3(3.63e-09)]_\ 158 A0A6I8RRT2_XENTR/194-525 5.50e-14 138_[2(1.34e-10)]_12_[3(2.36e-11)]_\ 162 A0A0G2JYI3_RAT/225-556 3.09e-13 138_[2(8.30e-10)]_12_[3(2.36e-11)]_\ 162 T1JZ26_TETUR/239-549 4.91e-21 37_[1(2.06e-11)]_86_[2(7.68e-12)]_\ 12_[3(7.42e-10)]_146 T1KSM5_TETUR/268-578 3.67e-20 37_[1(2.06e-11)]_86_[2(6.19e-11)]_\ 12_[3(7.42e-10)]_146 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kodomo ********************************************************************************