RID: 4CR9WRAV01N Job Title:>sp|F2Z5Z6|HERA_SULAC DNA double-strand break repair helicase HerA OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=herA PE=1 SV=1 Program: BLASTP Query: unnamed protein product ID: lcl|Query_781652(amino acid) Length: 495 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=DNA double-strand break repair helicase HerA;... Sulfolobus a... NA 330779 985 985 100% 0.0 100.00 495 F2Z5Z6.1 RecName: Full=DNA double-strand break repair helicase HerA;... Sulfurisphae... NA 273063 741 741 100% 0.0 72.32 495 Q96YR7.1 RecName: Full=DNA double-strand break repair helicase HerA... Saccharolobu... NA 273057 662 662 100% 0.0 63.91 500 Q97WG8.1 RecName: Full=Probable helicase MJ1565 [Methanocaldococcus... Methanocaldo... NA 243232 316 316 96% 2e-101 38.82 513 Q58960.1 RecName: Full=Probable helicase MJECL08 [Methanocaldococcus... Methanocaldo... NA 243232 239 239 95% 1e-71 33.59 520 Q60270.1 RecName: Full=Probable DNA double-strand break repair helicase... Methanocaldo... NA 243232 234 234 96% 4e-70 34.72 503 Q58824.1 RecName: Full=DNA double-strand break repair helicase HerA... Pyrococcus f... NA 186497 227 227 93% 1e-66 32.25 551 Q8U1P0.1 RecName: Full=DNA double-strand break repair protein Mre11... Methanotherm... NA 187420 52.0 52.0 28% 8e-06 31.94 587 O26641.1 RecName: Full=Uncharacterized protein YjgR [Escherichia coli... Escherichia ... NA 83333 46.6 46.6 33% 3e-04 29.07 500 P39342.1 RecName: Full=Uncharacterized protein aq_aa31 [Aquifex aeolicu... Aquifex aeol... NA 224324 42.0 42.0 19% 0.007 30.84 270 O66421.1 RecName: Full=ESX secretion system protein YukB [Bacillus... Bacillus sub... NA 224308 42.0 42.0 10% 0.011 42.31 1495 C0SPA7.1 RecName: Full=ESX secretion system protein EccC; AltName:... Geobacillus ... NA 420246 40.8 40.8 10% 0.029 42.31 1479 A4IKE7.1 RecName: Full=Ftsk domain-containing protein CA_C3709... Clostridium ... NA 272562 40.4 40.4 10% 0.040 39.62 1498 Q04351.2 Alignments: >RecName: Full=DNA double-strand break repair helicase HerA; AltName: Full=Helicase repair of Archaea [Sulfolobus acidocaldarius DSM 639] Sequence ID: F2Z5Z6.1 Length: 495 Range 1: 1 to 495 Score:985 bits(2547), Expect:0.0, Method:Compositional matrix adjust., Identities:495/495(100%), Positives:495/495(100%), Gaps:0/495(0%) Query 1 MTIGYIIGSATINEATAILEQKIRAGYYVILEYDGDKILGLITNVYTGSPLLDDNLNDVK 60 MTIGYIIGSATINEATAILEQKIRAGYYVILEYDGDKILGLITNVYTGSPLLDDNLNDVK Sbjct 1 MTIGYIIGSATINEATAILEQKIRAGYYVILEYDGDKILGLITNVYTGSPLLDDNLNDVK 60 Query 61 FVQRIKQLEANKIPFFIKARIKLLCKLDGKFTQPDLPPVAGTPVRLASDEELSTVFSAGD 120 FVQRIKQLEANKIPFFIKARIKLLCKLDGKFTQPDLPPVAGTPVRLASDEELSTVFSAGD Sbjct 61 FVQRIKQLEANKIPFFIKARIKLLCKLDGKFTQPDLPPVAGTPVRLASDEELSTVFSAGD 120 Query 121 VRIGKLIGSNVEVKIRLNPLSRHLAILAATGSGKSNTVAILSQRLVEIGGSILIFDYHGE 180 VRIGKLIGSNVEVKIRLNPLSRHLAILAATGSGKSNTVAILSQRLVEIGGSILIFDYHGE Sbjct 121 VRIGKLIGSNVEVKIRLNPLSRHLAILAATGSGKSNTVAILSQRLVEIGGSILIFDYHGE 180 Query 181 YYDSTLPNLNIIEPKLNPLYLSVNEFATLLEIRENANIQYRIIRRTFNQLKEEINNEIKE 240 YYDSTLPNLNIIEPKLNPLYLSVNEFATLLEIRENANIQYRIIRRTFNQLKEEINNEIKE Sbjct 181 YYDSTLPNLNIIEPKLNPLYLSVNEFATLLEIRENANIQYRIIRRTFNQLKEEINNEIKE 240 Query 241 GKTSLAELNSNFFERLKVKIEEEGRNEKRKESKDEVLNKVEDFAERYSDIIDITFGDVIN 300 GKTSLAELNSNFFERLKVKIEEEGRNEKRKESKDEVLNKVEDFAERYSDIIDITFGDVIN Sbjct 241 GKTSLAELNSNFFERLKVKIEEEGRNEKRKESKDEVLNKVEDFAERYSDIIDITFGDVIN 300 Query 301 KIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSRKENKIKKDSGLKFPILTVVEEAHVL 360 KIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSRKENKIKKDSGLKFPILTVVEEAHVL Sbjct 301 KIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSRKENKIKKDSGLKFPILTVVEEAHVL 360 Query 361 LSKDTNTLTKKWAGRIAREGRKFGVGLIIVSQRPKGLDENILSQMTNKIILKIVEPSDKK 420 LSKDTNTLTKKWAGRIAREGRKFGVGLIIVSQRPKGLDENILSQMTNKIILKIVEPSDKK Sbjct 361 LSKDTNTLTKKWAGRIAREGRKFGVGLIIVSQRPKGLDENILSQMTNKIILKIVEPSDKK 420 Query 421 YVLETSDNLSEDLADGLSSLDTGEAIIIGNVVKLPTIIKIDKFEGKLSGSDPNLTEEWKR 480 YVLETSDNLSEDLADGLSSLDTGEAIIIGNVVKLPTIIKIDKFEGKLSGSDPNLTEEWKR Sbjct 421 YVLETSDNLSEDLADGLSSLDTGEAIIIGNVVKLPTIIKIDKFEGKLSGSDPNLTEEWKR 480 Query 481 AKEEEIVHSDVSDWG 495 AKEEEIVHSDVSDWG Sbjct 481 AKEEEIVHSDVSDWG 495 >RecName: Full=DNA double-strand break repair helicase HerA; AltName: Full=StoHerA [Sulfurisphaera tokodaii str. 7] Sequence ID: Q96YR7.1 Length: 495 Range 1: 1 to 494 Score:741 bits(1913), Expect:0.0, Method:Compositional matrix adjust., Identities:358/495(72%), Positives:435/495(87%), Gaps:1/495(0%) Query 1 MTIGYIIGSATINEATAILEQKIRAGYYVILEYDGDKILGLITNVYTGSPLLDDNLNDVK 60 M IGY++GSAT EA +LE+K+R+GYYV LEYD +K+LGL+T + TGSPL+DD+LND++ Sbjct 1 MIIGYVVGSATTQEANVLLEKKVRSGYYVTLEYDDEKVLGLVTLITTGSPLVDDSLNDIE 60 Query 61 FVQRIKQLEANKIPFFIKARIKLLCKLDGKFTQPDLPPVAGTPVRLASDEELSTVFSAGD 120 VQRIKQ+ NKIP ++KA++KLLCKLDGK +QPDLPPVAGTPVRLA++EELST+FS G Sbjct 61 LVQRIKQM-GNKIPIYMKAKVKLLCKLDGKLSQPDLPPVAGTPVRLATNEELSTIFSEGT 119 Query 121 VRIGKLIGSNVEVKIRLNPLSRHLAILAATGSGKSNTVAILSQRLVEIGGSILIFDYHGE 180 +RIGKLIGS+VEV+IR+N L+RHLAILAATGSGKSNTVA+LS RL E+ GS+LIFDYHGE Sbjct 120 IRIGKLIGSDVEVRIRVNALTRHLAILAATGSGKSNTVAVLSSRLSEVFGSVLIFDYHGE 179 Query 181 YYDSTLPNLNIIEPKLNPLYLSVNEFATLLEIRENANIQYRIIRRTFNQLKEEINNEIKE 240 YY+S + NLN IEPK+NPL L+ +EFATLLEIRENA IQYRI+RR F EE ++K Sbjct 180 YYESEIKNLNNIEPKINPLNLTPDEFATLLEIRENATIQYRILRRAFKSFLEETKEKLKN 239 Query 241 GKTSLAELNSNFFERLKVKIEEEGRNEKRKESKDEVLNKVEDFAERYSDIIDITFGDVIN 300 G + ELN+NF + K++E +NEKRK+SKDEV+NK+EDF +RYS+IID T GDV++ Sbjct 240 GNVNYNELNNNFRNLILKKVDEVSKNEKRKDSKDEVINKIEDFLDRYSEIIDFTAGDVVD 299 Query 301 KIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSRKENKIKKDSGLKFPILTVVEEAHVL 360 KIK+GK+NV+NLSSLDEDAIDAIV+HYLR+ILTSRKENK+K+ GLKFP+L V+EEAHVL Sbjct 300 KIKIGKVNVINLSSLDEDAIDAIVSHYLRKILTSRKENKMKRKIGLKFPVLVVIEEAHVL 359 Query 361 LSKDTNTLTKKWAGRIAREGRKFGVGLIIVSQRPKGLDENILSQMTNKIILKIVEPSDKK 420 LSKD+NTLTK WAGRIAREGRKFGVGLIIVSQRPKG+DENILSQMTNKIILK+VEPSDKK Sbjct 360 LSKDSNTLTKHWAGRIAREGRKFGVGLIIVSQRPKGIDENILSQMTNKIILKMVEPSDKK 419 Query 421 YVLETSDNLSEDLADGLSSLDTGEAIIIGNVVKLPTIIKIDKFEGKLSGSDPNLTEEWKR 480 YVLETSDNLSED+ +GLS+LDTGEA+I+GN+V++P I+KIDKFEGKL+GSDPNL EEWK+ Sbjct 420 YVLETSDNLSEDIVEGLSALDTGEAVIVGNIVRMPAIVKIDKFEGKLAGSDPNLIEEWKK 479 Query 481 AKEEEIVHSDVSDWG 495 AKEE H+DV +WG Sbjct 480 AKEEIEEHADVLNWG 494 >RecName: Full=DNA double-strand break repair helicase HerA [Saccharolobus solfataricus P2] Sequence ID: Q97WG8.1 Length: 500 Range 1: 1 to 495 Score:662 bits(1709), Expect:0.0, Method:Compositional matrix adjust., Identities:317/496(64%), Positives:399/496(80%), Gaps:2/496(0%) Query 1 MTIGYIIGSATINEATAILEQKIRAGYYVILEYDGDKILGLITNVYTGSPLLDDNLNDVK 60 M IGY+IG AT EA + E+ +R G YV+LEYD K LGLITNV GSP+LDDN+ND++ Sbjct 1 MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPMLDDNMNDIE 60 Query 61 FVQRIKQLEANKIPFFIKARIKLLCKLDGKFTQPDLPPVAGTPVRLASDEELSTVFSA-G 119 VQR+KQ N IP + KA++K+LC ++ F PD+PP AGTP R A DEEL +++S G Sbjct 61 IVQRLKQFN-NSIPVYTKAKVKMLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDG 119 Query 120 DVRIGKLIGSNVEVKIRLNPLSRHLAILAATGSGKSNTVAILSQRLVEIGGSILIFDYHG 179 +RIG LIG NVEVK+ +N +RHLAILAATGSGKSNTVA+LSQR+ E+GGS+LIFDYHG Sbjct 120 QIRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAVLSQRISELGGSVLIFDYHG 179 Query 180 EYYDSTLPNLNIIEPKLNPLYLSVNEFATLLEIRENANIQYRIIRRTFNQLKEEINNEIK 239 EYYDS + NLN IEPKLNPLY++ EF+TLLEIRENA IQYRI+RR F ++ I ++K Sbjct 180 EYYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNGIREKLK 239 Query 240 EGKTSLAELNSNFFERLKVKIEEEGRNEKRKESKDEVLNKVEDFAERYSDIIDITFGDVI 299 EG+ + LNS F+E +K ++E +G ++K+ +KDEVLNK E+F +RYS++ID+T D+I Sbjct 240 EGQIPFSTLNSQFYELMKDELETQGNSDKKSSAKDEVLNKFEEFMDRYSNVIDLTSSDII 299 Query 300 NKIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSRKENKIKKDSGLKFPILTVVEEAHV 359 K+K GK+NVV+L+ LDED++DA+V+HYLRRIL SRK+ K K+SGLKFPI+ V+EEAHV Sbjct 300 EKVKRGKVNVVSLTQLDEDSMDAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHV 359 Query 360 LLSKDTNTLTKKWAGRIAREGRKFGVGLIIVSQRPKGLDENILSQMTNKIILKIVEPSDK 419 LSK+ NTLTK WA RIAREGRKFGVGL IVSQRPKGLDENILSQMTNKIILKI+EP+DK Sbjct 360 FLSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKIILKIIEPTDK 419 Query 420 KYVLETSDNLSEDLADGLSSLDTGEAIIIGNVVKLPTIIKIDKFEGKLSGSDPNLTEEWK 479 KY+LE+SDNLSEDLA+ LSSLD GEAIIIG +VKLP ++KID FEGKL GSDP++ EWK Sbjct 420 KYILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIGEWK 479 Query 480 RAKEEEIVHSDVSDWG 495 + +E E + +D+G Sbjct 480 KVEESEKIAKGFADFG 495 >RecName: Full=Probable helicase MJ1565 [Methanocaldococcus jannaschii DSM 2661] Sequence ID: Q58960.1 Length: 513 Range 1: 7 to 488 Score:316 bits(810), Expect:2e-101, Method:Compositional matrix adjust., Identities:191/492(39%), Positives:293/492(59%), Gaps:24/492(4%) Query 3 IGYIIGSATINEATAILEQKIRAGYYVILEYDGDKILGLITNVYTGSPLLDDNLNDVKFV 62 IGY IG I+E T + ++ + G YV + YD ++LG++ + G+ L+D LN ++ + Sbjct 7 IGYTIGETRIDELTFLAKEAPKVGDYVKINYDDSELLGMVESTIQGNMALEDILN-IEHL 65 Query 63 QRIKQLEANKIPFFIKARIKLLCKL-----DGKFTQPDLPPVAGTPVRLASDEELSTVFS 117 ++I++ E N ++I +IK+L + DG P +PP G P+ A DE L VF Sbjct 66 EKIREFEDNS-SYYILGKIKVLGDIRDLNKDGALKLPRVPPKPGIPIYRADDELLKKVFG 124 Query 118 AGDVRIGKLIG-SNVEVKIRLNPL-SRHLAILAATGSGKSNTVAILSQRLVEIGGSILIF 175 G ++IG L+ +VEVK+ N L SRHLAILA TG GKSNTVA+L + L ++ ++L+F Sbjct 125 NGHLKIGHLVTREDVEVKLDANKLCSRHLAILAMTGMGKSNTVAVLLRELNKLKATVLVF 184 Query 176 DYHGEYYD----STLPNLNIIEPKLNPLYLSVNEFATLLEIRENANIQYRIIRRTFNQLK 231 D HGEY D S ++IIEPK+N ++ ++ L + A Q IR+ ++K Sbjct 185 DMHGEYKDIYCESEKLRVHIIEPKINIYRINDDDLCDLAGVDAQATKQRPYIRKAIKEIK 244 Query 232 EEINNEIKEGKTSLAELNSNFFERLKVKIEEEGRNEKRKESKDEV---LNKVEDFAERYS 288 EE KE S + ++ + K+EE N+ K+ + + + ++ED + Sbjct 245 EER----KEHDFSTVD---DYINAIIGKLEEYKSNDNYKKDESSIQTAIFRLEDMLQFRK 297 Query 289 DIIDITFGDVINKIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSRKENKIKKDSGLKF 348 +II + + + IN I+ IN++ + LDE+A+D +V++ + +L RK I K Sbjct 298 NIITLHY-NPINDIREHYINIIPMEELDENAVDIVVSYIAKAVLDDRKRIIIDKGRDFAK 356 Query 349 PILTVVEEAHVLLSKDTNTLTKKWAGRIAREGRKFGVGLIIVSQRPKGLDENILSQMTNK 408 PI + EEAH++ + T K + RIAREGRKFGVGL +VSQRPK LD LSQ +N Sbjct 357 PIFMIFEEAHLIAPQHRKTRAKHYLSRIAREGRKFGVGLCLVSQRPKTLDAETLSQCSNL 416 Query 409 IILKIVEPSDKKYVLETSDNLSEDLADGLSSLDTGEAIIIGNVVKLPTIIKIDKFEGKLS 468 II K++EP+D+K+V S+NLSEDL L+SL+ GEAII+G +K+P I+K+DKF+G+ Sbjct 417 IISKLIEPTDQKHVQMASENLSEDLVKQLTSLNIGEAIILGPCIKVPAIVKVDKFDGRYG 476 Query 469 GSDPNLTEEWKR 480 G D NL E W++ Sbjct 477 GEDLNLVELWEK 488 >RecName: Full=Probable helicase MJECL08 [Methanocaldococcus jannaschii DSM 2661] Sequence ID: Q60270.1 Length: 520 Range 1: 7 to 513 Score:239 bits(610), Expect:1e-71, Method:Compositional matrix adjust., Identities:173/515(34%), Positives:278/515(53%), Gaps:52/515(10%) Query 1 MTIGYIIGSATINEATAILEQ----KIRAGYYVILE-YDGDKILGLITNVYTGSPLLDDN 55 + +G ++ S +NE ++E KI+ G +VI + GD +L IT + + + L+ D Sbjct 7 VVVGTVVASKNVNEFEFVIENQVIDKIKKGEFVITKNTHGDYLLSKITKIVSVNALIGDK 66 Query 56 LNDVKFVQRIK------QLEANKIPFFIKARIKLLCKLDGKFTQPDLPPV-AGTPVRLAS 108 D + +I+ ++ N F A+I + + + ++ P+ V L Sbjct 67 SEDASELAKIRGVIYSEEMLNNSSKFLASAKILGVINNESGSIESNVYPINVPQNVYLTK 126 Query 109 DEELSTVFSAGDVRIGKL-IGSNVEVKIRLNPL-SRHLAILAATGSGKSNTVAILSQRLV 166 D+ L+ +FS G + +G L + S+ +VK+ L SRH A+LA TG+GKSNT+A+L Q L Sbjct 127 DDLLAKIFSNGSIEVGYLKVRSSTKVKLNAKELCSRHFAVLAMTGAGKSNTIAVLVQELF 186 Query 167 EIGG---SILIFDYHGEYYDSTLPNLNIIEPKLNPLYLSVNEFATLLEIRENANIQYRII 223 E +I+I D HGEY + N +I+ KLNP+ + A LL I EN+++Q + Sbjct 187 EKDKGKMNIVIVDPHGEYV--KMRNTHILPAKLNPILVPEEHLAKLLGIGENSSVQKSFL 244 Query 224 RRTFNQLKEEINNEIKEGKTSLAEL------------------NSNFFERLKVKIEEEGR 265 + L + E KE K ++ L NS +R+ ++ + R Sbjct 245 --VYAALT--VKYECKENKKQISGLEYLKKIEEKLVECADKIANSEDKKRIYIEYYDGTR 300 Query 266 NEKRKESKDE------VLNKVEDFAERYSDIIDITFGDVINKIKLGKINVVNLSSLDEDA 319 + KD+ V+ K+ F + +I+ G + IK KINV+ L ++++ Sbjct 301 CRXKTVKKDDEMSINRVIEKLRWFINKNKNILGENEG--MFDIKSDKINVLPLQKIEDEE 358 Query 320 IDAIVAHYLRRILTSR---KENKIKKDSGLKFPILTVVEEAHVLLSKDTNTLTKKWAGRI 376 IV +L+R+L R ++I + L+ P L ++EEAH+ +K+ + W RI Sbjct 359 AITIVGEFLKRVLKERIKSVHDEIVEIKALEKPTLVIIEEAHLFAAKNLKDRSGYWINRI 418 Query 377 AREGRKFGVGLIIVSQRPKGLDENILSQMTNKIILKIVEPSDKKYVLETSDNLSEDLADG 436 A+EGRKFGVGL +VSQRPK L+ +LSQM KIIL+IVEP+D+KY+LE+S+N+ EDL Sbjct 419 AKEGRKFGVGLGLVSQRPKELNPTVLSQMNTKIILRIVEPTDQKYILESSENVGEDLLQD 478 Query 437 LSSLDTGEAIIIGNVVKLPTIIKIDKFEGKLSGSD 471 L L TGEAI++G+ + LP ++KI K++G L G D Sbjct 479 LPQLSTGEAIVVGSSLPLPALVKIKKYDGVLGGED 513 >RecName: Full=Probable DNA double-strand break repair helicase HerA [Methanocaldococcus jannaschii DSM 2661] Sequence ID: Q58824.1 Length: 503 Range 1: 1 to 497 Score:234 bits(598), Expect:4e-70, Method:Compositional matrix adjust., Identities:183/527(35%), Positives:269/527(51%), Gaps:79/527(14%) Query 1 MTIGYIIGSATINEATAILEQKIRAGYYVILE-YDGDKILGLITNVYTGSPLLDDNLNDV 59 M + ++G T T +KIR G YVI + DG +LG+I NV + DV Sbjct 1 MYVMKVVGKTTTTHFTFESLEKIRFGEYVIAKNVDGRDVLGVIKNV----------VADV 50 Query 60 -KFVQRIKQLEANKIPFFIKARIKLLCKLDGKFTQPDLPPV-AGTPVRLASDEELSTVFS 117 KFV +K++ LDG P+ P+ + VRL DE L+ ++ Sbjct 51 EKFV----------------GEVKVIGVLDGNKIIPNRTPILPNSEVRLCDDEILNNIYL 94 Query 118 AGD-VRIGKLIG-SNVEVKIRLNPL-SRHLAILAATGSGKSNTVAILSQRLVEIGGSILI 174 D + IG L+ NV V + N L SRH AIL+ TG GKSNT ++L + L + G++++ Sbjct 95 TPDGLNIGHLLTRDNVRVYLDTNKLVSRHFAILSITGGGKSNTASVLCRELAKKNGTVIM 154 Query 175 FDYHGEY----YDSTLPNLNIIEPKLNPLYLSVNEFATLLEIRENANIQYRI-IRRTFNQ 229 D HGEY ++ + +I P +NP+ L+ +EFA L+ I +N I+ R+ + ++ Sbjct 155 IDPHGEYISLYHEDMEGKIKVINPIINPVLLAPSEFANLIGIGDN-EIEKRVYVEFAYHT 213 Query 230 LKEEINNEIKEGKTSLAELNSNFFERLK---VKIEEEGRNEKRKESKDEVLNKVEDFAER 286 +K E + +G + ++ + +E K V E + N R+ L K EDF Sbjct 214 VKHECPD--AKGIEFIEKIENLLYEWSKIASVGWEIKYYNPLRRNYDRRKLEK-EDFVIL 270 Query 287 YSDI-----------IDITFGDVINKIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSR 335 S I ++I DVI + ++GKIN+VNLS L+ + V + +L R Sbjct 271 MSLIDTISKFKLDYALNIGDRDVIEEFEIGKINIVNLSGLEIPQMVTFVGFIAKHLLLKR 330 Query 336 --------------KENKIKKDSGLKF----------PILTVVEEAHVLLSKDTNTLTKK 371 +E + S L P+L +VEEAH+ + + Sbjct 331 ITYLKSLKDVYSINEEIRRVAQSNLNIIESHYKVVTKPVLLIVEEAHIFIPVNEQNSASL 390 Query 372 WAGRIAREGRKFGVGLIIVSQRPKGLDENILSQMTNKIILKIVEPSDKKYVLETSDNLSE 431 W G+IAREGRKFGVGL +VSQRPK L ++LSQ KIILKIVEP D+KY+ S+ L E Sbjct 391 WLGKIAREGRKFGVGLGLVSQRPKQLHPDVLSQTNTKIILKIVEPEDQKYIQRASEELGE 450 Query 432 DLADGLSSLDTGEAIIIGNVVKLPTIIKIDKFEGKLSGSDPNLTEEW 478 DL L+SL GEA+I+G + LP+I+KIDKF+G G D N+ EW Sbjct 451 DLVKDLASLGIGEAVIVGAAISLPSIVKIDKFDGVYGGKDINIVGEW 497 >RecName: Full=DNA double-strand break repair helicase HerA [Pyrococcus furiosus DSM 3638] Sequence ID: Q8U1P0.1 Length: 551 Range 1: 32 to 547 Score:227 bits(578), Expect:1e-66, Method:Compositional matrix adjust., Identities:169/524(32%), Positives:271/524(51%), Gaps:67/524(12%) Query 27 YYVILEYDGDKILGLITNVYTGSPLLDD---NLNDV-----KFVQRIKQLEANKIPFFIK 78 + V DGD +LG + +V + LL N N + ++ + + + E + Sbjct 32 FVVTKNRDGDLVLGTVRHVKNVNWLLSSVKSNFNSLALDIEEYGESLGENEE------VV 85 Query 79 ARIKLLCKLDGKFTQPDLPPVA-GTPVRLASDEELSTVFSAGDVRIGKLI-GSNVEVKIR 136 A +++L K++G P+ P+ G V ASD+ L ++ + IG L+ NV +K+ Sbjct 86 ATVRILGKIEGNELVPNRVPIRNGEYVYKASDDLLQMIYGNDGIEIGTLLLRPNVRIKLD 145 Query 137 LNPL-SRHLAILAATGSGKSNTVAILSQRLVE-IGGSILIFDYHGEYYDSTLPN-----L 189 +N L SRH A+LA TG+GKSN VA++ + +VE +GG++++ D HG+Y + LP + Sbjct 146 VNELVSRHFAVLAVTGAGKSNAVAVIIKGIVEDVGGTVVVLDPHGDYVNLRLPETGIDLV 205 Query 190 NIIEPKLNPLYLSVNEFATLLEIRENANIQYRIIRRTFNQLKEEINNEIKEGKTSLAELN 249 NII+ K+ L E A L+ I +A IQ + + +K + + E Sbjct 206 NIIDGKIRIEDLDPEELADLIGISSSAQIQRHFLSLAWETVKHKNQSLGGESLLEALLDL 265 Query 250 SN-FFERLKVKI--EEEGR------NEKRKESKDEVLNKVEDFAERYSDIIDITFGDVIN 300 N + R +K E+EGR +R E+ ++ ++ F Y +I+ T +++ Sbjct 266 LNEWISRKTIKYWSEKEGRMKSEDLKSERIETIRGIIFRIRRFLRNYGNIV--TSENLVA 323 Query 301 KIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSRKE------------NKIKKDS---- 344 IK G +NV++LS LDE+ + +V +L + R E +K K+D Sbjct 324 AIKPGMVNVIDLSPLDENQMKVVVGKFLEAVFEKRVEYEMARKRFEKETSKKKRDEYEEI 383 Query 345 ---------GLKFPILTVVEEAHVLLSKDTNTLTKKWAGRIAREGRKFGVGLIIVSQRPK 395 L +PIL +VEEAH+ + + GRIAREGRKFGVGL +VSQRP Sbjct 384 MTEIESKYPALAYPILVIVEEAHIFAPQGEENDAMRIMGRIAREGRKFGVGLGVVSQRPS 443 Query 396 GLDENILSQMTNKIILKIVEPSDKKYVLETSDNLSEDLADGLSSLDTGEAIIIGNVVKLP 455 L+E+ILSQM KIIL+IV P D+ YVL+ S+ LS+DL D ++ L GEA+I+G +KLP Sbjct 444 KLNEDILSQMNTKIILRIVNPRDQDYVLKASEQLSKDLMDDIAGLGKGEAVIVGQAIKLP 503 Query 456 TIIKIDKFE--------GKLSGSDPNLTEEWKRAKEEEIVHSDV 491 +++I F+ G+ G D + + W + K + D+ Sbjct 504 ALVRIYNFKELRGKAGTGQYGGEDIGILDRWNKMKRNMVNSLDI 547 >RecName: Full=DNA double-strand break repair protein Mre11 [Methanothermobacter thermautotrophicus str. Delta H] Sequence ID: O26641.1 Length: 587 Range 1: 5 to 143 Score:52.0 bits(123), Expect:8e-06, Method:Compositional matrix adjust., Identities:46/144(32%), Positives:69/144(47%), Gaps:7/144(4%) Query 323 IVAHYLRRILTSRKENKIKKDSGLKFPILTVVEEAHVLLSKDT-NTLTKKWAGRIAREGR 381 I A RR + ++++ K I V+EEA +L K+ IAREGR Sbjct 5 ISAEIFRRYQQYKATGELRR----KPVIGIVIEEAPRVLGKEVIERQGNNIYSTIAREGR 60 Query 382 KFGVGLIIVSQRPKGLDENILSQMTNKIILKIVEPSDKKYVL-ETSDNLSEDLADGLSSL 440 KF +GLI ++Q + +L+ M KIIL ++ ++ S +LS D ++SL Sbjct 61 KFNIGLIAITQLVSLIPRTVLANMNTKIILGNEMAQERAEIIGSASQDLSAD-NRTIASL 119 Query 441 DTGEAIIIGNVVKLPTIIKIDKFE 464 D GEAI+ K +KI FE Sbjct 120 DKGEAIVSSIFTKFAVPVKIPLFE 143 >RecName: Full=Uncharacterized protein YjgR [Escherichia coli K-12] Sequence ID: P39342.1 Length: 500 Range 1: 199 to 363 Score:46.6 bits(109), Expect:3e-04, Method:Compositional matrix adjust., Identities:50/172(29%), Positives:80/172(46%), Gaps:14/172(8%) Query 283 FAERYSDIIDITFGDVINKIKLGKINVVNLSSLDEDAIDAIVAHYLRRILTSRKENKIKK 342 F E DI D D K G IN+++ L + + + A L +L+ E ++ + Sbjct 199 FGEPMLDIKDWMRTDANGK---GVINILSAEKLYQ--MPKLYAASLLWMLSELYE-QLPE 252 Query 343 DSGLKFPILTVV-EEAHVLLSKDTNTLTKKWAGRIAREGRKFGVGLIIVSQRPKGLDENI 401 L+ P L +EAH+L + L K ++ R R GVG+ VSQ P + +N+ Sbjct 253 AGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIE-QVIRLIRSKGVGVWFVSQNPSDIPDNV 311 Query 402 LSQMTNKI--ILKIVEPSDKKYVLETSD----NLSEDLADGLSSLDTGEAII 447 L Q+ N++ L+ P D+K V + N + D + L TGEA+I Sbjct 312 LGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALI 363 >RecName: Full=Uncharacterized protein aq_aa31 [Aquifex aeolicus VF5] Sequence ID: O66421.1 Length: 270 Range 1: 155 to 261 Score:42.0 bits(97), Expect:0.007, Method:Compositional matrix adjust., Identities:33/107(31%), Positives:53/107(49%), Gaps:11/107(10%) Query 88 DGKFTQPDLPPVAGTPVRLASDEELSTV----FSAGD----VRIGKLIGSNVEVKIRLNP 139 DGK P G PV S++ L + FS D V++G + S+++V + N Sbjct 155 DGKLDILRNPFHVGEPVYKISEKTLGKILKKNFSGRDMEVPVKVGVIENSDIDVFVDANE 214 Query 140 -LSRHLAILAATGSGKSNTVAILSQRLVEIGGSILIF--DYHGEYYD 183 +S+H+ +L TGSGKS L+E + ++ D HGEY++ Sbjct 215 VISKHMLVLGTTGSGKSYFTKRFISSLLESDKEVEVYVLDPHGEYFN 261 >RecName: Full=ESX secretion system protein YukB [Bacillus subtilis subsp. subtilis str. 168] Sequence ID: C0SPA7.1 Length: 1495 Range 1: 814 to 865 Score:42.0 bits(97), Expect:0.011, Method:Compositional matrix adjust., Identities:22/52(42%), Positives:33/52(63%), Gaps:1/52(1%) Query 377 AREGRKFGVGLIIVSQRPKGL-DENILSQMTNKIILKIVEPSDKKYVLETSD 427 AR GR GV LI+ +Q+P G+ D+ I S K+ LK+ + +D K +L+ SD Sbjct 814 ARIGRSLGVHLILATQKPGGIIDDQIWSNSRFKVALKVQDATDSKEILKNSD 865 >RecName: Full=ESX secretion system protein EccC; AltName: Full=Type VII secretion system protein EccC; Short=T7SS protein EccC [Geobacillus thermodenitrificans NG80-2] Sequence ID: A4IKE7.1 Length: 1479 Range 1: 804 to 855 Score:40.8 bits(94), Expect:0.029, Method:Compositional matrix adjust., Identities:22/52(42%), Positives:32/52(61%), Gaps:1/52(1%) Query 377 AREGRKFGVGLIIVSQRPKG-LDENILSQMTNKIILKIVEPSDKKYVLETSD 427 AR GR GV LI+ +Q+P+G +DE I S +I LK+ + +D K +L D Sbjct 804 ARIGRSLGVHLILATQKPRGVIDEQIWSNARFRISLKMQDVNDSKEILRNGD 855 >RecName: Full=Ftsk domain-containing protein CA_C3709 [Clostridium acetobutylicum ATCC 824] Sequence ID: Q04351.2 Length: 1498 Range 1: 812 to 864 Score:40.4 bits(93), Expect:0.040, Method:Compositional matrix adjust., Identities:21/53(40%), Positives:33/53(62%), Gaps:1/53(1%) Query 376 IAREGRKFGVGLIIVSQRPKG-LDENILSQMTNKIILKIVEPSDKKYVLETSD 427 +AR GR GV LI+ +Q+P G +++ I + T+KI LK+ D +L+T D Sbjct 812 VARIGRSLGVHLILATQKPSGVVNDQIEANSTSKIALKMASEQDSNELLKTHD 864