******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.5.1 (Release date: Sun Jan 29 10:33:12 2023 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= reduced.fa CONTROL SEQUENCES= --none-- ALPHABET= ACDEFGHIKLMNPQRSTVWY Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ sp|B9DFU2|MAX1_ARATH/1-4 1.0000 467 sp|O22203|C98A3_ARATH/1- 1.0000 467 sp|O64989|C90B1_ARATH/1- 1.0000 467 sp|O81077|ABAH2_ARATH/1- 1.0000 467 sp|O81346|C79B2_ARATH/1- 1.0000 467 sp|P48421|C83A1_ARATH/1- 1.0000 467 sp|P92994|TCMO_ARATH/1-4 1.0000 467 sp|Q42569|C90A1_ARATH/1- 1.0000 467 sp|Q501D8|C79B3_ARATH/1- 1.0000 467 sp|Q6TBX7|LUT1_ARATH/1-4 1.0000 467 sp|Q93VK5|LUT5_ARATH/1-4 1.0000 467 sp|Q93ZB2|KO1_ARATH/1-46 1.0000 467 sp|Q949P1|ABAH1_ARATH/1- 1.0000 467 sp|Q949U1|C79F1_ARATH/1- 1.0000 467 sp|Q94IA6|C90D1_ARATH/1- 1.0000 467 sp|Q96242|CP74A_ARATH/1- 1.0000 467 sp|Q9FUY7|C79F2_ARATH/1- 1.0000 467 sp|Q9LMX7|C78A5_ARATH/1- 1.0000 467 sp|Q9LSF8|C82G1_ARATH/1- 1.0000 467 sp|Q9M066|C90C1_ARATH/1- 1.0000 467 sp|Q9SAA9|CP511_ARATH/1- 1.0000 467 sp|Q9SRQ1|C89A9_ARATH/1- 1.0000 467 sp|Q9SZ46|C82C4_ARATH/1- 1.0000 467 sp|Q9ZSY9|C74B2_ARATH/1- 1.0000 467 sp|F4IK45|C70B2_ARATH/1- 1.0000 467 sp|F4JW83|C84A4_ARATH/1- 1.0000 467 sp|O23051|KAO1_ARATH/1-4 1.0000 467 sp|O23365|C97B3_ARATH/1- 1.0000 467 sp|O48786|C734A_ARATH/1- 1.0000 467 sp|O64698|C7102_ARATH/1- 1.0000 467 sp|O65790|C81F1_ARATH/1- 1.0000 467 sp|P48422|C86A1_ARATH/1- 1.0000 467 sp|Q0WQ07|C7051_ARATH/1- 1.0000 467 sp|Q42600|C84A1_ARATH/1- 1.0000 467 sp|Q6NKZ8|C14A2_ARATH/1- 1.0000 467 sp|Q8L7D5|THAH_ARATH/1-4 1.0000 467 sp|Q93Z79|C14A1_ARATH/1- 1.0000 467 sp|Q9C5Y2|KAO2_ARATH/1-4 1.0000 467 sp|Q9C788|C70B1_ARATH/1- 1.0000 467 sp|Q9FF18|C7351_ARATH/1- 1.0000 467 sp|Q9FLC8|C79A2_ARATH/1- 1.0000 467 sp|Q9FMV7|C94B1_ARATH/1- 1.0000 467 sp|Q9FMY1|C86B1_ARATH/1- 1.0000 467 sp|Q9FVS9|C96AF_ARATH/1- 1.0000 467 sp|Q9LJY5|C05AK_ARATH/1- 1.0000 467 sp|Q9LMM1|C86A4_ARATH/1- 1.0000 467 sp|Q9SD85|F3PH_ARATH/1-4 1.0000 467 sp|Q9SHG5|C72C1_ARATH/1- 1.0000 467 sp|Q9SLP1|C78A9_ARATH/1- 1.0000 467 sp|Q9SZU1|C81F4_ARATH/1- 1.0000 467 sp|Q9T093|C70B3_ARATH/1- 1.0000 467 sp|Q9ZUX1|C94C1_ARATH/1- 1.0000 467 sp|Q9ZW95|C7352_ARATH/1- 1.0000 467 sp|A0A140JWM8|C7162_ARAT 1.0000 467 sp|O64636|C76C1_ARATH/1- 1.0000 467 sp|P58048|C71B8_ARATH/1- 1.0000 467 sp|Q42602|C89A2_ARATH/1- 1.0000 467 sp|Q9ASR3|C7091_ARATH/1- 1.0000 467 sp|Q9FIB0|C78A7_ARATH/1- 1.0000 467 sp|Q9LHA1|C8D11_ARATH/1- 1.0000 467 sp|Q9LVY7|C7161_ARATH/1- 1.0000 467 sp|Q9LZ31|C77A4_ARATH/1- 1.0000 467 sp|O64638|C76C3_ARATH/1- 1.0000 467 sp|O65438|C71AR_ARATH/1- 1.0000 467 sp|P58047|C71AS_ARATH/1- 1.0000 467 sp|Q9FG65|C81D1_ARATH/1- 1.0000 467 sp|Q9LJY7|C75AK_ARATH/1- 1.0000 467 sp|Q9LUC5|C7A15_ARATH/1- 1.0000 467 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme reduced.fa -o meme_results -mod anr -minw 4 -maxw 8 -nmotifs 4 model: mod= anr nmotifs= 4 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values width: minw= 4 maxw= 8 nsites: minsites= 2 maxsites= 340 wnsites= 0.8 theta: spmap= pam spfuzz= 120 em: prior= megap b= 158780 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 31756 N= 68 sample: seed= 0 hsfrac= 0 searchsize= 31756 norand= no csites= 1000 Dirichlet mixture priors file: prior30.plib Letter frequencies in dataset: A 0.058 C 0.0117 D 0.0504 E 0.0673 F 0.0547 G 0.0584 H 0.024 I 0.0638 K 0.0647 L 0.11 M 0.0306 N 0.0391 P 0.0515 Q 0.0268 R 0.0604 S 0.0695 T 0.0527 V 0.0633 W 0.0168 Y 0.0264 Background letter frequencies (from file dataset with add-one prior applied): A 0.058 C 0.0117 D 0.0504 E 0.0673 F 0.0547 G 0.0584 H 0.024 I 0.0638 K 0.0647 L 0.11 M 0.0306 N 0.0391 P 0.0515 Q 0.0268 R 0.0604 S 0.0695 T 0.0527 V 0.0633 W 0.0168 Y 0.0264 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF FGAGRRLC MEME-1 width = 8 sites = 58 llr = 980 E-value = 9.9e-175 ******************************************************************************** -------------------------------------------------------------------------------- Motif FGAGRRLC MEME-1 Description -------------------------------------------------------------------------------- Simplified A :13:::1: pos.-specific C :::::::a probability D :::1:::: matrix E :::::::: F 9::::::: G :819::1: H :::::1:: I ::1:::2: K :::::::: L ::1:::2: M ::::::1: N 111::::: P ::::3::: Q :::::::: R ::::49:: S :12:1:2: T ::1:::1: V ::1:1:1: W :::::::: Y :::::::: bits 6.4 * 5.8 * 5.1 * 4.5 * Relative 3.8 * * * Entropy 3.2 ** * * * (24.4 bits) 2.6 ** * * * 1.9 ** *** * 1.3 ****** * 0.6 ******** 0.0 -------- Multilevel FGAGRRXC consensus S P sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif FGAGRRLC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- sp|Q9SRQ1|C89A9_ARATH/1- 447 1.41e-11 TGTREIKMMP FGAGRRMC PGYALSLLHL sp|Q42602|C89A2_ARATH/1- 442 5.56e-11 TGSRGIKMMP FGAGRRIC PGIGLAMLHL sp|O64636|C76C1_ARATH/1- 443 5.56e-11 VRGRDYELTP FGAGRRIC PGMPLAMKTV sp|Q9SD85|F3PH_ARATH/1-4 438 5.56e-11 VKGSDFELIP FGAGRRIC AGLSLGLRTI sp|P58048|C71B8_ARATH/1- 436 1.13e-10 YKGQHYELLP FGAGRRSC PGMTLGITIL sp|O64638|C76C3_ARATH/1- 444 1.82e-10 VKGRDFELIP FGSGRRMC PGISMALKTM sp|Q0WQ07|C7051_ARATH/1- 441 1.82e-10 KKEKILNFLP FGSGRRMC PGSNLGYIFV sp|P48421|C83A1_ARATH/1- 435 1.82e-10 FKGTDYEFIP FGSGRRMC PGMRLGAAML sp|O65438|C71AR_ARATH/1- 431 3.03e-10 FQRTDSKFVP FGAGRRLC PGIGFSLVLS sp|Q9SZU1|C81F4_ARATH/1- 428 3.03e-10 EKDDVRMLIA FGSGRRIC PGVGLAHKIV sp|Q42600|C84A1_ARATH/1- 451 4.15e-10 FKGSNFEFIP FGSGRRSC PGMQLGLYA sp|F4JW83|C84A4_ARATH/1- 440 4.15e-10 LKGNNFEFVP FGSGRRSC PGMQLGLYAF sp|Q9SZ46|C82C4_ARATH/1- 456 4.15e-10 VRGQNFELMP FGSGRRSC PGSS sp|Q9LSF8|C82G1_ARATH/1- 445 4.15e-10 CEKSNFEYIP FGSGRRSC PGVNLGLRVV sp|O22203|C98A3_ARATH/1- 431 5.06e-10 MKGHDFRLLP FGAGRRVC PGAQLGINLV sp|P58047|C71AS_ARATH/1- 436 6.70e-10 FQGQDFNFIP FGSGRRLC PDIDFATMLI sp|Q9LVY7|C7161_ARATH/1- 417 8.28e-10 SGPKPYTYVP FGGGPRMC PGKEYARLEI sp|Q9LMX7|C78A5_ARATH/1- 452 9.56e-10 IMGSDLRLAP FGSGRRVC PGKAMGLA sp|Q9LJY7|C75AK_ARATH/1- 437 1.28e-09 EERRALKHIA FGSGRRGC PGSNLATIFI sp|Q9LJY5|C05AK_ARATH/1- 447 1.28e-09 RREQALKFLP FGSGRRGC PGSNLAYMIV sp|Q42569|C90A1_ARATH/1- 411 1.41e-09 TTGPSNVFTP FGGGPRLC PGYELARVAL sp|O64989|C90B1_ARATH/1- 455 1.41e-09 FSTWGNNYMP FGGGPRLC AGSEL sp|O65790|C81F1_ARATH/1- 431 1.97e-09 SDYYVYKLMP FGNGRRTC PGAGLGQRIV sp|Q9LZ31|C77A4_ARATH/1- 449 2.25e-09 TGISGVKMIP FGVGRRIC PGLAMATIHV sp|P92994|TCMO_ARATH/1-4 440 2.50e-09 ANGNDFRYVP FGVGRRSC PGIILALPIL sp|Q9LHA1|C8D11_ARATH/1- 435 2.76e-09 KKGEDKKLMP FGIGRRSC PGSGLAQRLV sp|B9DFU2|MAX1_ARATH/1-4 460 5.20e-09 KHRHPYAFIP FGIGPRAC sp|Q9M066|C90C1_ARATH/1- 456 6.37e-09 SANSSICFTP FGGGQRLC PGLE sp|Q94IA6|C90D1_ARATH/1- 435 6.37e-09 RDMNTSSFSP FGGGQRLC PGLDLARLET sp|Q9SAA9|CP511_ARATH/1- 426 6.92e-09 KAAGAFSYIA FGGGRHGC LGEPFAYLQI sp|Q9FG65|C81D1_ARATH/1- 433 7.78e-09 KEEEAQKLLA FGLGRRAC PGSGLAQRIV sp|Q9LMM1|C86A4_ARATH/1- 454 7.78e-09 INHDQYRFVA FNAGPRIC LGKDLA sp|A0A140JWM8|C7162_ARAT 413 8.75e-09 SGPKPYTYVP FGGGSRIC PGREYARLEI sp|P48422|C86A1_ARATH/1- 449 9.73e-09 TPKDGYKFVA FNAGPRTC LGKDLAYNQM sp|Q9FVS9|C96AF_ARATH/1- 437 1.34e-08 RHEPSYKFMA FNSGPRTC LGKNLALLQM sp|Q9FMV7|C94B1_ARATH/1- 443 1.34e-08 KSVSSFKFPV FQAGPRVC IGKEMAFTQM sp|Q93ZB2|KO1_ARATH/1-46 447 1.34e-08 ETSDLHKTMA FGAGKRVC AGALQASLMA sp|Q9SHG5|C72C1_ARATH/1- 460 1.63e-08 ATKGRLSFLP FSSGPRTC sp|Q8L7D5|THAH_ARATH/1-4 419 1.63e-08 LRSGSKTFMV FGGGVRQC VGAEFARLQI sp|Q9FLC8|C79A2_ARATH/1- 460 1.81e-08 LNESDLNIIS FSAGRRGC sp|O23051|KAO1_ARATH/1-4 432 2.01e-08 FVPKAGAFLP FGAGSHLC PGNDLAKLEI sp|Q9LUC5|C7A15_ARATH/1- 453 2.19e-08 ATKSQVSFFP FAWGPRIC IGQNFAL sp|Q9ZW95|C7352_ARATH/1- 451 2.64e-08 SFASSRHFMP FAAGPRNC IGQTFAMME sp|Q9FF18|C7351_ARATH/1- 457 2.64e-08 PFASGRHFIP FAAGPRNC IGQ sp|O48786|C734A_ARATH/1- 456 4.14e-08 AAKHPVGFIP FGLGVRTC IGQN sp|O81077|ABAH2_ARATH/1- 424 4.87e-08 VAPKPYTYMP FGNGVHSC PGSELAKLEM sp|Q949P1|ABAH1_ARATH/1- 404 5.26e-08 VAPKPNTFMP FGNGTHSC PGNELAKLEM sp|O64698|C7102_ARATH/1- 432 5.69e-08 DQVFKRNYLA FGWGAHQC VGQRYALNHL sp|Q9ASR3|C7091_ARATH/1- 457 6.64e-08 AANHPNALLA FSVGPRAC IGQ sp|Q9T093|C70B3_ARATH/1- 458 7.16e-08 ATIHPNALLP FSIGPRAC IA sp|Q9ZUX1|C94C1_ARATH/1- 432 8.32e-08 RPENPVKYPV FQAGARVC IGKEMAIMEM sp|Q9C5Y2|KAO2_ARATH/1-4 429 1.13e-07 YTPKAGTFLP FGLGSHLC PGNDLAKLEI sp|Q9FF18|C7351_ARATH/1- 101 3.32e-07 KQYGKRFIVW NGTDPRLC LTETELIKEL sp|Q9ASR3|C7091_ARATH/1- 100 4.44e-07 SQYGETFLYW NGTEPRIC ISDPELAKTM sp|F4IK45|C70B2_ARATH/1- 157 5.11e-07 SQYGETFLYW QGTDPRLC ISDHELAKQI sp|Q9ZW95|C7352_ARATH/1- 102 5.49e-07 KQYGKRFIMW NGTEPRLC LTETEMIKEL sp|Q9LMM1|C86A4_ARATH/1- 192 5.49e-07 LTFDNICGLA FGKDTRTC APGLPENGFA sp|P58048|C71B8_ARATH/1- 186 3.16e-06 FTAGIIFRVS FGQNFREC DFIDMDRLEE -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif FGAGRRLC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|Q9SRQ1|C89A9_ARATH/1- 1.4e-11 446_[1]_13 sp|Q42602|C89A2_ARATH/1- 5.6e-11 441_[1]_18 sp|O64636|C76C1_ARATH/1- 5.6e-11 442_[1]_17 sp|Q9SD85|F3PH_ARATH/1-4 5.6e-11 437_[1]_22 sp|P58048|C71B8_ARATH/1- 3.2e-06 185_[1]_242_[1]_24 sp|O64638|C76C3_ARATH/1- 1.8e-10 443_[1]_16 sp|Q0WQ07|C7051_ARATH/1- 1.8e-10 440_[1]_19 sp|P48421|C83A1_ARATH/1- 1.8e-10 434_[1]_25 sp|O65438|C71AR_ARATH/1- 3e-10 430_[1]_29 sp|Q9SZU1|C81F4_ARATH/1- 3e-10 427_[1]_32 sp|Q42600|C84A1_ARATH/1- 4.1e-10 450_[1]_9 sp|F4JW83|C84A4_ARATH/1- 4.1e-10 439_[1]_20 sp|Q9SZ46|C82C4_ARATH/1- 4.1e-10 455_[1]_4 sp|Q9LSF8|C82G1_ARATH/1- 4.1e-10 444_[1]_15 sp|O22203|C98A3_ARATH/1- 5.1e-10 430_[1]_29 sp|P58047|C71AS_ARATH/1- 6.7e-10 435_[1]_24 sp|Q9LVY7|C7161_ARATH/1- 8.3e-10 416_[1]_43 sp|Q9LMX7|C78A5_ARATH/1- 9.6e-10 451_[1]_8 sp|Q9LJY7|C75AK_ARATH/1- 1.3e-09 436_[1]_23 sp|Q9LJY5|C05AK_ARATH/1- 1.3e-09 446_[1]_13 sp|Q42569|C90A1_ARATH/1- 1.4e-09 410_[1]_49 sp|O64989|C90B1_ARATH/1- 1.4e-09 454_[1]_5 sp|O65790|C81F1_ARATH/1- 2e-09 430_[1]_29 sp|Q9LZ31|C77A4_ARATH/1- 2.3e-09 448_[1]_11 sp|P92994|TCMO_ARATH/1-4 2.5e-09 439_[1]_20 sp|Q9LHA1|C8D11_ARATH/1- 2.8e-09 434_[1]_25 sp|B9DFU2|MAX1_ARATH/1-4 5.2e-09 459_[1] sp|Q9M066|C90C1_ARATH/1- 6.4e-09 455_[1]_4 sp|Q94IA6|C90D1_ARATH/1- 6.4e-09 434_[1]_25 sp|Q9SAA9|CP511_ARATH/1- 6.9e-09 425_[1]_34 sp|Q9FG65|C81D1_ARATH/1- 7.8e-09 432_[1]_27 sp|Q9LMM1|C86A4_ARATH/1- 5.5e-07 191_[1]_254_[1]_6 sp|A0A140JWM8|C7162_ARAT 8.8e-09 412_[1]_47 sp|P48422|C86A1_ARATH/1- 9.7e-09 448_[1]_11 sp|Q9FVS9|C96AF_ARATH/1- 1.3e-08 436_[1]_23 sp|Q9FMV7|C94B1_ARATH/1- 1.3e-08 442_[1]_17 sp|Q93ZB2|KO1_ARATH/1-46 1.3e-08 446_[1]_13 sp|Q9SHG5|C72C1_ARATH/1- 1.6e-08 459_[1] sp|Q8L7D5|THAH_ARATH/1-4 1.6e-08 418_[1]_41 sp|Q9FLC8|C79A2_ARATH/1- 1.8e-08 459_[1] sp|O23051|KAO1_ARATH/1-4 2e-08 431_[1]_28 sp|Q9LUC5|C7A15_ARATH/1- 2.2e-08 452_[1]_7 sp|Q9ZW95|C7352_ARATH/1- 5.5e-07 101_[1]_341_[1]_9 sp|Q9FF18|C7351_ARATH/1- 3.3e-07 100_[1]_348_[1]_3 sp|O48786|C734A_ARATH/1- 4.1e-08 455_[1]_4 sp|O81077|ABAH2_ARATH/1- 4.9e-08 423_[1]_36 sp|Q949P1|ABAH1_ARATH/1- 5.3e-08 403_[1]_56 sp|O64698|C7102_ARATH/1- 5.7e-08 431_[1]_28 sp|Q9ASR3|C7091_ARATH/1- 4.4e-07 99_[1]_349_[1]_3 sp|Q9T093|C70B3_ARATH/1- 7.2e-08 457_[1]_2 sp|Q9ZUX1|C94C1_ARATH/1- 8.3e-08 431_[1]_28 sp|Q9C5Y2|KAO2_ARATH/1-4 1.1e-07 428_[1]_31 sp|F4IK45|C70B2_ARATH/1- 5.1e-07 156_[1]_303 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif FGAGRRLC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF FGAGRRLC width=8 seqs=58 sp|Q9SRQ1|C89A9_ARATH/1- ( 447) FGAGRRMC 1 sp|Q42602|C89A2_ARATH/1- ( 442) FGAGRRIC 1 sp|O64636|C76C1_ARATH/1- ( 443) FGAGRRIC 1 sp|Q9SD85|F3PH_ARATH/1-4 ( 438) FGAGRRIC 1 sp|P58048|C71B8_ARATH/1- ( 436) FGAGRRSC 1 sp|O64638|C76C3_ARATH/1- ( 444) FGSGRRMC 1 sp|Q0WQ07|C7051_ARATH/1- ( 441) FGSGRRMC 1 sp|P48421|C83A1_ARATH/1- ( 435) FGSGRRMC 1 sp|O65438|C71AR_ARATH/1- ( 431) FGAGRRLC 1 sp|Q9SZU1|C81F4_ARATH/1- ( 428) FGSGRRIC 1 sp|Q42600|C84A1_ARATH/1- ( 451) FGSGRRSC 1 sp|F4JW83|C84A4_ARATH/1- ( 440) FGSGRRSC 1 sp|Q9SZ46|C82C4_ARATH/1- ( 456) FGSGRRSC 1 sp|Q9LSF8|C82G1_ARATH/1- ( 445) FGSGRRSC 1 sp|O22203|C98A3_ARATH/1- ( 431) FGAGRRVC 1 sp|P58047|C71AS_ARATH/1- ( 436) FGSGRRLC 1 sp|Q9LVY7|C7161_ARATH/1- ( 417) FGGGPRMC 1 sp|Q9LMX7|C78A5_ARATH/1- ( 452) FGSGRRVC 1 sp|Q9LJY7|C75AK_ARATH/1- ( 437) FGSGRRGC 1 sp|Q9LJY5|C05AK_ARATH/1- ( 447) FGSGRRGC 1 sp|Q42569|C90A1_ARATH/1- ( 411) FGGGPRLC 1 sp|O64989|C90B1_ARATH/1- ( 455) FGGGPRLC 1 sp|O65790|C81F1_ARATH/1- ( 431) FGNGRRTC 1 sp|Q9LZ31|C77A4_ARATH/1- ( 449) FGVGRRIC 1 sp|P92994|TCMO_ARATH/1-4 ( 440) FGVGRRSC 1 sp|Q9LHA1|C8D11_ARATH/1- ( 435) FGIGRRSC 1 sp|B9DFU2|MAX1_ARATH/1-4 ( 460) FGIGPRAC 1 sp|Q9M066|C90C1_ARATH/1- ( 456) FGGGQRLC 1 sp|Q94IA6|C90D1_ARATH/1- ( 435) FGGGQRLC 1 sp|Q9SAA9|CP511_ARATH/1- ( 426) FGGGRHGC 1 sp|Q9FG65|C81D1_ARATH/1- ( 433) FGLGRRAC 1 sp|Q9LMM1|C86A4_ARATH/1- ( 454) FNAGPRIC 1 sp|A0A140JWM8|C7162_ARAT ( 413) FGGGSRIC 1 sp|P48422|C86A1_ARATH/1- ( 449) FNAGPRTC 1 sp|Q9FVS9|C96AF_ARATH/1- ( 437) FNSGPRTC 1 sp|Q9FMV7|C94B1_ARATH/1- ( 443) FQAGPRVC 1 sp|Q93ZB2|KO1_ARATH/1-46 ( 447) FGAGKRVC 1 sp|Q9SHG5|C72C1_ARATH/1- ( 460) FSSGPRTC 1 sp|Q8L7D5|THAH_ARATH/1-4 ( 419) FGGGVRQC 1 sp|Q9FLC8|C79A2_ARATH/1- ( 460) FSAGRRGC 1 sp|O23051|KAO1_ARATH/1-4 ( 432) FGAGSHLC 1 sp|Q9LUC5|C7A15_ARATH/1- ( 453) FAWGPRIC 1 sp|Q9ZW95|C7352_ARATH/1- ( 451) FAAGPRNC 1 sp|Q9FF18|C7351_ARATH/1- ( 457) FAAGPRNC 1 sp|O48786|C734A_ARATH/1- ( 456) FGLGVRTC 1 sp|O81077|ABAH2_ARATH/1- ( 424) FGNGVHSC 1 sp|Q949P1|ABAH1_ARATH/1- ( 404) FGNGTHSC 1 sp|O64698|C7102_ARATH/1- ( 432) FGWGAHQC 1 sp|Q9ASR3|C7091_ARATH/1- ( 457) FSVGPRAC 1 sp|Q9T093|C70B3_ARATH/1- ( 458) FSIGPRAC 1 sp|Q9ZUX1|C94C1_ARATH/1- ( 432) FQAGARVC 1 sp|Q9C5Y2|KAO2_ARATH/1-4 ( 429) FGLGSHLC 1 sp|Q9FF18|C7351_ARATH/1- ( 101) NGTDPRLC 1 sp|Q9ASR3|C7091_ARATH/1- ( 100) NGTEPRIC 1 sp|F4IK45|C70B2_ARATH/1- ( 157) QGTDPRLC 1 sp|Q9ZW95|C7352_ARATH/1- ( 102) NGTEPRLC 1 sp|Q9LMM1|C86A4_ARATH/1- ( 192) FGKDTRTC 1 sp|P58048|C71B8_ARATH/1- ( 186) FGQNFREC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif FGAGRRLC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 8 n= 31280 bayes= 9.71401 E= 9.9e-175 -565 -443 -642 -694 406 -649 -476 -536 -687 -475 -510 26 -663 -76 -681 -581 -624 -540 -398 -192 -45 -379 -366 -457 -599 381 -431 -575 -444 -627 -520 -3 -511 -15 -446 -44 -449 -503 -512 -478 216 -281 -418 -374 -387 112 -351 -19 -162 -93 -281 36 -471 -45 -392 169 38 -13 92 -332 -282 -382 -41 -140 -597 392 -426 -574 -440 -626 -520 -130 -510 -407 -443 -356 -450 -504 -510 -476 -61 -407 -365 -319 -171 -426 -322 -468 -125 -474 -412 -312 256 47 275 -40 -55 -35 -529 -408 -744 -638 -795 -846 -852 -729 207 -864 -592 -844 -841 -722 -759 -609 389 -781 -771 -870 -739 -726 28 -261 -539 -191 -364 16 -404 126 -464 76 145 -22 -507 33 -466 107 93 54 -424 -328 -456 639 -623 -617 -627 -611 -572 -551 -660 -618 -540 -577 -645 -552 -610 -572 -492 -577 -672 -607 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif FGAGRRLC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 8 nsites= 58 E= 9.9e-175 0.000000 0.000000 0.000000 0.000000 0.931034 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.051724 0.000000 0.017241 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.051724 0.000000 0.000000 0.000000 0.000000 0.793103 0.000000 0.000000 0.000000 0.000000 0.000000 0.051724 0.000000 0.034483 0.000000 0.068966 0.000000 0.000000 0.000000 0.000000 0.275862 0.000000 0.000000 0.000000 0.000000 0.137931 0.000000 0.051724 0.017241 0.051724 0.000000 0.051724 0.000000 0.017241 0.000000 0.241379 0.068966 0.051724 0.034483 0.000000 0.000000 0.000000 0.051724 0.034483 0.000000 0.896552 0.000000 0.000000 0.000000 0.000000 0.000000 0.017241 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.034483 0.000000 0.000000 0.000000 0.017241 0.000000 0.000000 0.000000 0.017241 0.000000 0.000000 0.000000 0.310345 0.034483 0.448276 0.051724 0.034483 0.051724 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.103448 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.896552 0.000000 0.000000 0.000000 0.000000 0.000000 0.068966 0.000000 0.000000 0.017241 0.000000 0.068966 0.000000 0.155172 0.000000 0.189655 0.086207 0.034483 0.000000 0.034483 0.000000 0.155172 0.103448 0.086207 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif FGAGRRLC MEME-1 regular expression -------------------------------------------------------------------------------- FG[AS]G[RP]RXC -------------------------------------------------------------------------------- Time 127.38 secs. ******************************************************************************** ******************************************************************************** MOTIF ETLRLYPP MEME-2 width = 8 sites = 63 llr = 985 E-value = 2.9e-154 ******************************************************************************** -------------------------------------------------------------------------------- Motif ETLRLYPP MEME-2 Description -------------------------------------------------------------------------------- Simplified A :2:::::1 pos.-specific C :::::::: probability D :::::::: matrix E a::::::: F ::2::::: G :1:::::: H :::::4:: I ::::1::: K :::::::: L ::7:7::: M ::1::::: N :::::::: P ::::::86 Q :::::::: R :::a1::: S :2:::::1 T :4:::::: V :1:::::1 W :::::::: Y :::::4:: bits 6.4 5.8 5.1 4.5 Relative 3.8 * * Entropy 3.2 * * ** (22.6 bits) 2.6 * * ** 1.9 ******** 1.3 ******** 0.6 ******** 0.0 -------- Multilevel ETLRLYPP consensus H sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ETLRLYPP MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- sp|Q9FIB0|C78A7_ARATH/1- 396 3.46e-10 KLPYLNAVVK ETLRLHPP GPLLSWARLS sp|Q93Z79|C14A1_ARATH/1- 398 3.46e-10 NLKTVTMVIQ ETLRLYPP AAFVSREALE sp|F4JW83|C84A4_ARATH/1- 365 3.46e-10 KLTFLKCILK ETLRLHPP FPLLLHETVK sp|Q9LMX7|C78A5_ARATH/1- 376 3.46e-10 KLPYLQAIVK ETLRLHPP GPLLSWARLA sp|Q6NKZ8|C14A2_ARATH/1- 393 4.43e-10 NLKTVTMVIQ ETMRLYPP APIVGREASK sp|P58048|C71B8_ARATH/1- 361 6.15e-10 KVEYLKLVIK ETFRLHPP GPFLLPRQVM sp|Q9LJY5|C05AK_ARATH/1- 368 1.07e-09 NLPYLHAVIK EALRLHPP GPLLPREFQQ sp|Q9SAA9|CP511_ARATH/1- 346 1.07e-09 EMDVLYRCIK EALRLHPP LIMLMRASHS sp|Q9ZW95|C7352_ARATH/1- 379 1.53e-09 SLTSLNKVIN ESLRLYPP ATLLPRMAFE sp|Q9FF18|C7351_ARATH/1- 385 1.53e-09 KLTSLSKVIN ESLRLYPP ATLLPRMAFE sp|O48786|C734A_ARATH/1- 381 1.53e-09 KLKTLSMILN ESLRLYPP IVATIRRAKS sp|Q9LUC5|C7A15_ARATH/1- 378 2.07e-09 QLKVMTMILY EVLRLYPP VTQLTRAIHK sp|Q9SLP1|C78A9_ARATH/1- 387 2.07e-09 SLVYLTAVVK EVLRLHPP GPLLSWARLA sp|Q9FMV7|C94B1_ARATH/1- 360 2.07e-09 EMSYTKACLC EAMRLYPP VAWDSKHAAN sp|Q9FVS9|C96AF_ARATH/1- 360 2.20e-09 KLVYLHAALS ESMRLYPP LPFNHKSPAK sp|O22203|C98A3_ARATH/1- 356 2.66e-09 RLPYLQCVVK ESFRLHPP TPLMLPHRSN sp|Q9LJY7|C75AK_ARATH/1- 365 4.56e-09 KLPYLQSVVK EGLRLHPP LPLMVRTFQR sp|Q9FG65|C81D1_ARATH/1- 363 4.56e-09 ELPYLKNIVL ETLRLHPA TPLLVPHMAS sp|P58047|C71AS_ARATH/1- 358 4.56e-09 NMKYLKAVIK EVFRLHPP GPLSIPRQLS sp|O64638|C76C3_ARATH/1- 370 4.56e-09 SLPYLQAIVK ETLRLHPA APLIPRKSES sp|Q9LHA1|C8D11_ARATH/1- 365 4.56e-09 KLPYLQHIVS ETLRLYPV APMLLPHLAS sp|Q9SZU1|C81F4_ARATH/1- 354 4.56e-09 NLPYLQNVVS ETLRLHPA APVLVPRSTA sp|Q9C788|C70B1_ARATH/1- 388 4.56e-09 KLHYLHAVIT ETLRLYPA VPQDPKGVLE sp|Q0WQ07|C7051_ARATH/1- 364 4.56e-09 NLPYLQAVVK EGLRLHPP TPLVVREFQE sp|Q9SZ46|C82C4_ARATH/1- 378 4.56e-09 NLVYLQAIIK ETLRLYPA GPLLGPREAM sp|Q9LSF8|C82G1_ARATH/1- 370 4.64e-09 NLKYLQAIVK ETHRLYPP APLTGIREAR sp|Q9LMM1|C86A4_ARATH/1- 376 5.62e-09 RLVYLKAAIS ETLRLYPS VPEDSKHVEN sp|Q42600|C84A1_ARATH/1- 376 5.62e-09 KLTYLKCTLK ETLRMHPP IPLLLHETAE sp|P48422|C86A1_ARATH/1- 370 5.62e-09 RLVYLKAALA ETLRLYPS VPQDFKYVVD sp|Q93VK5|LUT5_ARATH/1-4 433 1.43e-08 KLKYTTRVMN ESLRLYPQ PPVLIRRSID sp|Q9SRQ1|C89A9_ARATH/1- 367 1.57e-08 KLSYLKAVIL ECLRRHPP GHYLSYHKVT sp|Q9SD85|F3PH_ARATH/1-4 359 1.87e-08 QLPYLQAVIK ENFRLHPP TPLSLPHIAS sp|Q9FMY1|C86B1_ARATH/1- 405 1.87e-08 KMDYLQAALS EALRLYPS VPVDHKEVQE sp|Q9FLC8|C79A2_ARATH/1- 383 2.48e-08 NLNYVKACVK EAFRLHPV APFNLPHMST sp|Q501D8|C79B3_ARATH/1- 395 2.48e-08 KLNYVKAIIR EAFRLHPV AAFNLPHVAL sp|O81346|C79B2_ARATH/1- 393 2.48e-08 KLNYVKAILR EAFRLHPV AAFNLPHVAL sp|O64636|C76C1_ARATH/1- 368 2.72e-08 KLPYLQAVVK ETFRLHTP VPLLIPRKAE sp|Q9ASR3|C7091_ARATH/1- 382 4.24e-08 KLKLMNMVIM ESLRLYGP VSALAREASV sp|Q42602|C89A2_ARATH/1- 364 4.24e-08 KMPYLKAVVL EGLRRHPP GHFLLPHSVT sp|Q9T093|C70B3_ARATH/1- 383 4.24e-08 KLKLMNMVLM ESLRLYGP VIKISREATQ sp|F4IK45|C70B2_ARATH/1- 436 4.24e-08 KLKLMNTVFM ESLRLYGP VLNLLRLASE sp|O65438|C71AR_ARATH/1- 356 4.60e-08 KMNYLHCVIK EGLRLHPS GPLLFRLPSE sp|Q9ZUX1|C94C1_ARATH/1- 355 4.91e-08 EMDYLHASLY ESMRLFPP VQFDSKFALN sp|Q6TBX7|LUT1_ARATH/1-4 403 5.19e-08 ELKYITRCIN ESMRLYPH PPVLIRRAQV sp|Q9SHG5|C72C1_ARATH/1- 385 5.75e-08 HLKVVTMILH EVLRLYSP AYFTCRITKQ sp|Q9FUY7|C79F2_ARATH/1- 385 6.24e-08 NLNYLKACCR ETFRIHPS AHYVPPHVAR sp|Q949U1|C79F1_ARATH/1- 386 6.24e-08 NLNYLKACCR ETFRIHPS AHYVPSHLAR sp|O65790|C81F1_ARATH/1- 357 1.15e-07 VLPYLQNVVS ETFRLFPV APFLIPRSPT sp|Q9ZSY9|C74B2_ARATH/1- 363 1.68e-07 EMELVKSVVY ETLRFNPP VPLQFARARK sp|Q93ZB2|KO1_ARATH/1-46 372 1.95e-07 QVPYLNGVFH ETLRKYSP APLVPIRYAH sp|O23365|C97B3_ARATH/1- 415 2.65e-07 KLEYIRLIVV EVLRLFPQ PPLLIRRTLK sp|Q9LZ31|C77A4_ARATH/1- 371 4.27e-07 KMVFLQAFVK ELLRKHPP TYFSLTHAVM sp|Q96242|CP74A_ARATH/1- 380 4.27e-07 KMELTKSVVY ECLRFEPP VTAQYGRAKK sp|Q9LVY7|C7161_ARATH/1- 347 5.38e-07 KMRYSWNVAC EVMRIVPP LSGTFREAID sp|A0A140JWM8|C7162_ARAT 343 5.38e-07 KMRYSWNVAC EVMRIVPP LAGTFREAID sp|O81077|ABAH2_ARATH/1- 61 5.38e-07 PGSMGLPYIG ETLRLYTE NPNSFFATRQ sp|P48421|C83A1_ARATH/1- 359 6.61e-07 NLPYFRALVK ETLRIEPV IPLLIPRACI sp|P92994|TCMO_ARATH/1-4 363 1.25e-06 KLPYLQAVVK ETLRLRMA IPLLVPHMNL sp|B9DFU2|MAX1_ARATH/1-4 385 1.52e-06 KFPYLDQVIK EAMRFYMV SPLVARETAK sp|Q949P1|ABAH1_ARATH/1- 48 2.10e-06 PGTMGWPYVG ETFQLYSQ DPNVFFQSKQ sp|Q9LVY7|C7161_ARATH/1- 145 4.26e-06 RMLLSQFMKP EALRRYVG VMDEIAQRHF sp|A0A140JWM8|C7162_ARAT 141 4.26e-06 RMLLMPSMKP EALRRYVG VMDEIAQKHF sp|O64698|C7102_ARATH/1- 359 6.14e-06 EMKYTRAVAR EVVRYRPP ATMVPHIATN -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ETLRLYPP MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|Q9FIB0|C78A7_ARATH/1- 3.5e-10 395_[2]_64 sp|Q93Z79|C14A1_ARATH/1- 3.5e-10 397_[2]_62 sp|F4JW83|C84A4_ARATH/1- 3.5e-10 364_[2]_95 sp|Q9LMX7|C78A5_ARATH/1- 3.5e-10 375_[2]_84 sp|Q6NKZ8|C14A2_ARATH/1- 4.4e-10 392_[2]_67 sp|P58048|C71B8_ARATH/1- 6.2e-10 360_[2]_99 sp|Q9LJY5|C05AK_ARATH/1- 1.1e-09 367_[2]_92 sp|Q9SAA9|CP511_ARATH/1- 1.1e-09 345_[2]_114 sp|Q9ZW95|C7352_ARATH/1- 1.5e-09 378_[2]_81 sp|Q9FF18|C7351_ARATH/1- 1.5e-09 384_[2]_75 sp|O48786|C734A_ARATH/1- 1.5e-09 380_[2]_79 sp|Q9LUC5|C7A15_ARATH/1- 2.1e-09 377_[2]_82 sp|Q9SLP1|C78A9_ARATH/1- 2.1e-09 386_[2]_73 sp|Q9FMV7|C94B1_ARATH/1- 2.1e-09 359_[2]_100 sp|Q9FVS9|C96AF_ARATH/1- 2.2e-09 359_[2]_100 sp|O22203|C98A3_ARATH/1- 2.7e-09 355_[2]_104 sp|Q9LJY7|C75AK_ARATH/1- 4.6e-09 364_[2]_95 sp|Q9FG65|C81D1_ARATH/1- 4.6e-09 362_[2]_97 sp|P58047|C71AS_ARATH/1- 4.6e-09 357_[2]_102 sp|O64638|C76C3_ARATH/1- 4.6e-09 369_[2]_90 sp|Q9LHA1|C8D11_ARATH/1- 4.6e-09 364_[2]_95 sp|Q9SZU1|C81F4_ARATH/1- 4.6e-09 353_[2]_106 sp|Q9C788|C70B1_ARATH/1- 4.6e-09 387_[2]_72 sp|Q0WQ07|C7051_ARATH/1- 4.6e-09 363_[2]_96 sp|Q9SZ46|C82C4_ARATH/1- 4.6e-09 377_[2]_82 sp|Q9LSF8|C82G1_ARATH/1- 4.6e-09 369_[2]_90 sp|Q9LMM1|C86A4_ARATH/1- 5.6e-09 375_[2]_84 sp|Q42600|C84A1_ARATH/1- 5.6e-09 375_[2]_84 sp|P48422|C86A1_ARATH/1- 5.6e-09 369_[2]_90 sp|Q93VK5|LUT5_ARATH/1-4 1.4e-08 432_[2]_27 sp|Q9SRQ1|C89A9_ARATH/1- 1.6e-08 366_[2]_93 sp|Q9SD85|F3PH_ARATH/1-4 1.9e-08 358_[2]_101 sp|Q9FMY1|C86B1_ARATH/1- 1.9e-08 404_[2]_55 sp|Q9FLC8|C79A2_ARATH/1- 2.5e-08 382_[2]_77 sp|Q501D8|C79B3_ARATH/1- 2.5e-08 394_[2]_65 sp|O81346|C79B2_ARATH/1- 2.5e-08 392_[2]_67 sp|O64636|C76C1_ARATH/1- 2.7e-08 367_[2]_92 sp|Q9ASR3|C7091_ARATH/1- 4.2e-08 381_[2]_78 sp|Q42602|C89A2_ARATH/1- 4.2e-08 363_[2]_96 sp|Q9T093|C70B3_ARATH/1- 4.2e-08 382_[2]_77 sp|F4IK45|C70B2_ARATH/1- 4.2e-08 435_[2]_24 sp|O65438|C71AR_ARATH/1- 4.6e-08 355_[2]_104 sp|Q9ZUX1|C94C1_ARATH/1- 4.9e-08 354_[2]_105 sp|Q6TBX7|LUT1_ARATH/1-4 5.2e-08 402_[2]_57 sp|Q9SHG5|C72C1_ARATH/1- 5.7e-08 384_[2]_75 sp|Q9FUY7|C79F2_ARATH/1- 6.2e-08 384_[2]_75 sp|Q949U1|C79F1_ARATH/1- 6.2e-08 385_[2]_74 sp|O65790|C81F1_ARATH/1- 1.2e-07 356_[2]_103 sp|Q9ZSY9|C74B2_ARATH/1- 1.7e-07 362_[2]_97 sp|Q93ZB2|KO1_ARATH/1-46 2e-07 371_[2]_88 sp|O23365|C97B3_ARATH/1- 2.6e-07 414_[2]_45 sp|Q9LZ31|C77A4_ARATH/1- 4.3e-07 370_[2]_89 sp|Q96242|CP74A_ARATH/1- 4.3e-07 379_[2]_80 sp|Q9LVY7|C7161_ARATH/1- 4.3e-06 144_[2]_194_[2]_113 sp|A0A140JWM8|C7162_ARAT 4.3e-06 140_[2]_194_[2]_117 sp|O81077|ABAH2_ARATH/1- 5.4e-07 60_[2]_399 sp|P48421|C83A1_ARATH/1- 6.6e-07 358_[2]_101 sp|P92994|TCMO_ARATH/1-4 1.2e-06 362_[2]_97 sp|B9DFU2|MAX1_ARATH/1-4 1.5e-06 384_[2]_75 sp|Q949P1|ABAH1_ARATH/1- 2.1e-06 47_[2]_412 sp|O64698|C7102_ARATH/1- 6.1e-06 358_[2]_101 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ETLRLYPP MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ETLRLYPP width=8 seqs=63 sp|Q9FIB0|C78A7_ARATH/1- ( 396) ETLRLHPP 1 sp|Q93Z79|C14A1_ARATH/1- ( 398) ETLRLYPP 1 sp|F4JW83|C84A4_ARATH/1- ( 365) ETLRLHPP 1 sp|Q9LMX7|C78A5_ARATH/1- ( 376) ETLRLHPP 1 sp|Q6NKZ8|C14A2_ARATH/1- ( 393) ETMRLYPP 1 sp|P58048|C71B8_ARATH/1- ( 361) ETFRLHPP 1 sp|Q9LJY5|C05AK_ARATH/1- ( 368) EALRLHPP 1 sp|Q9SAA9|CP511_ARATH/1- ( 346) EALRLHPP 1 sp|Q9ZW95|C7352_ARATH/1- ( 379) ESLRLYPP 1 sp|Q9FF18|C7351_ARATH/1- ( 385) ESLRLYPP 1 sp|O48786|C734A_ARATH/1- ( 381) ESLRLYPP 1 sp|Q9LUC5|C7A15_ARATH/1- ( 378) EVLRLYPP 1 sp|Q9SLP1|C78A9_ARATH/1- ( 387) EVLRLHPP 1 sp|Q9FMV7|C94B1_ARATH/1- ( 360) EAMRLYPP 1 sp|Q9FVS9|C96AF_ARATH/1- ( 360) ESMRLYPP 1 sp|O22203|C98A3_ARATH/1- ( 356) ESFRLHPP 1 sp|Q9LJY7|C75AK_ARATH/1- ( 365) EGLRLHPP 1 sp|Q9FG65|C81D1_ARATH/1- ( 363) ETLRLHPA 1 sp|P58047|C71AS_ARATH/1- ( 358) EVFRLHPP 1 sp|O64638|C76C3_ARATH/1- ( 370) ETLRLHPA 1 sp|Q9LHA1|C8D11_ARATH/1- ( 365) ETLRLYPV 1 sp|Q9SZU1|C81F4_ARATH/1- ( 354) ETLRLHPA 1 sp|Q9C788|C70B1_ARATH/1- ( 388) ETLRLYPA 1 sp|Q0WQ07|C7051_ARATH/1- ( 364) EGLRLHPP 1 sp|Q9SZ46|C82C4_ARATH/1- ( 378) ETLRLYPA 1 sp|Q9LSF8|C82G1_ARATH/1- ( 370) ETHRLYPP 1 sp|Q9LMM1|C86A4_ARATH/1- ( 376) ETLRLYPS 1 sp|Q42600|C84A1_ARATH/1- ( 376) ETLRMHPP 1 sp|P48422|C86A1_ARATH/1- ( 370) ETLRLYPS 1 sp|Q93VK5|LUT5_ARATH/1-4 ( 433) ESLRLYPQ 1 sp|Q9SRQ1|C89A9_ARATH/1- ( 367) ECLRRHPP 1 sp|Q9SD85|F3PH_ARATH/1-4 ( 359) ENFRLHPP 1 sp|Q9FMY1|C86B1_ARATH/1- ( 405) EALRLYPS 1 sp|Q9FLC8|C79A2_ARATH/1- ( 383) EAFRLHPV 1 sp|Q501D8|C79B3_ARATH/1- ( 395) EAFRLHPV 1 sp|O81346|C79B2_ARATH/1- ( 393) EAFRLHPV 1 sp|O64636|C76C1_ARATH/1- ( 368) ETFRLHTP 1 sp|Q9ASR3|C7091_ARATH/1- ( 382) ESLRLYGP 1 sp|Q42602|C89A2_ARATH/1- ( 364) EGLRRHPP 1 sp|Q9T093|C70B3_ARATH/1- ( 383) ESLRLYGP 1 sp|F4IK45|C70B2_ARATH/1- ( 436) ESLRLYGP 1 sp|O65438|C71AR_ARATH/1- ( 356) EGLRLHPS 1 sp|Q9ZUX1|C94C1_ARATH/1- ( 355) ESMRLFPP 1 sp|Q6TBX7|LUT1_ARATH/1-4 ( 403) ESMRLYPH 1 sp|Q9SHG5|C72C1_ARATH/1- ( 385) EVLRLYSP 1 sp|Q9FUY7|C79F2_ARATH/1- ( 385) ETFRIHPS 1 sp|Q949U1|C79F1_ARATH/1- ( 386) ETFRIHPS 1 sp|O65790|C81F1_ARATH/1- ( 357) ETFRLFPV 1 sp|Q9ZSY9|C74B2_ARATH/1- ( 363) ETLRFNPP 1 sp|Q93ZB2|KO1_ARATH/1-46 ( 372) ETLRKYSP 1 sp|O23365|C97B3_ARATH/1- ( 415) EVLRLFPQ 1 sp|Q9LZ31|C77A4_ARATH/1- ( 371) ELLRKHPP 1 sp|Q96242|CP74A_ARATH/1- ( 380) ECLRFEPP 1 sp|Q9LVY7|C7161_ARATH/1- ( 347) EVMRIVPP 1 sp|A0A140JWM8|C7162_ARAT ( 343) EVMRIVPP 1 sp|O81077|ABAH2_ARATH/1- ( 61) ETLRLYTE 1 sp|P48421|C83A1_ARATH/1- ( 359) ETLRIEPV 1 sp|P92994|TCMO_ARATH/1-4 ( 363) ETLRLRMA 1 sp|B9DFU2|MAX1_ARATH/1-4 ( 385) EAMRFYMV 1 sp|Q949P1|ABAH1_ARATH/1- ( 48) ETFQLYSQ 1 sp|Q9LVY7|C7161_ARATH/1- ( 145) EALRRYVG 1 sp|A0A140JWM8|C7162_ARAT ( 141) EALRRYVG 1 sp|O64698|C7102_ARATH/1- ( 359) EVVRYRPP 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ETLRLYPP MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 8 n= 31280 bayes= 7.15868 E= 2.9e-154 -550 -566 -299 387 -723 -580 -539 -636 -662 -728 -672 -488 -710 -402 -659 -624 -607 -637 -675 -629 136 134 -578 -623 -606 1 -540 -489 -558 -277 -466 -124 -573 -444 -560 128 303 89 -611 -564 -620 -531 -885 -829 175 -822 -65 -361 -810 256 203 -790 -769 -607 -758 -789 -630 -179 -587 -534 -447 -344 -558 -586 -632 -512 -328 -552 -276 -558 -535 -429 -496 -96 398 -495 -490 -595 -457 -503 -392 -325 -568 -509 -52 -552 -442 6 -147 279 -53 -490 -495 -342 -42 -480 -396 -260 -438 -107 -647 -540 -718 -111 -3 -720 406 -640 -691 -602 -597 -129 -740 -549 -95 -650 -658 -101 -366 401 -284 -405 -456 -456 -568 -51 -440 -521 -439 -513 -20 -450 396 -344 -467 -65 -84 -115 -611 -531 55 -407 -451 -209 -565 -106 -78 -518 -434 -509 -501 -445 359 61 -463 25 -384 55 -608 -527 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ETLRLYPP MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 8 nsites= 63 E= 2.9e-154 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.158730 0.031746 0.000000 0.000000 0.000000 0.063492 0.000000 0.000000 0.000000 0.015873 0.000000 0.015873 0.000000 0.000000 0.000000 0.174603 0.412698 0.126984 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.190476 0.000000 0.015873 0.000000 0.000000 0.650794 0.126984 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.015873 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.015873 0.984127 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.047619 0.000000 0.000000 0.079365 0.031746 0.746032 0.015873 0.000000 0.000000 0.000000 0.063492 0.000000 0.000000 0.000000 0.000000 0.015873 0.000000 0.000000 0.000000 0.031746 0.047619 0.000000 0.412698 0.000000 0.000000 0.000000 0.000000 0.015873 0.000000 0.000000 0.031746 0.000000 0.000000 0.031746 0.000000 0.428571 0.000000 0.000000 0.000000 0.000000 0.000000 0.047619 0.000000 0.000000 0.000000 0.000000 0.031746 0.000000 0.809524 0.000000 0.000000 0.047619 0.031746 0.031746 0.000000 0.000000 0.095238 0.000000 0.000000 0.015873 0.000000 0.031746 0.015873 0.000000 0.000000 0.000000 0.000000 0.000000 0.587302 0.047619 0.000000 0.095238 0.000000 0.111111 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ETLRLYPP MEME-2 regular expression -------------------------------------------------------------------------------- ETLRL[YH]PP -------------------------------------------------------------------------------- Time 184.76 secs. ******************************************************************************** ******************************************************************************** MOTIF EEFKPERF MEME-3 width = 8 sites = 65 llr = 981 E-value = 6.6e-147 ******************************************************************************** -------------------------------------------------------------------------------- Motif EEFKPERF MEME-3 Description -------------------------------------------------------------------------------- Simplified A :1:::::: pos.-specific C :::::::: probability D 1::2:1:: matrix E 34:1:6:: F ::9::::6 G :::::::: H :::::::1 I :::::::: K 12:3:::: L 2::::::: M :::::::: N 1::3:::: P ::::a::: Q :1:::::: R :::1::a: S :::::1:: T :1:::::: V :::::::: W :::::1:2 Y :::::::: bits 6.4 5.8 5.1 4.5 * Relative 3.8 * * * Entropy 3.2 * * ** (21.8 bits) 2.6 * * ** 1.9 ****** 1.3 ******* 0.6 ******** 0.0 -------- Multilevel EEFKPERF consensus K N W sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif EEFKPERF MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- sp|P58048|C71B8_ARATH/1- 412 1.65e-10 GRDPKCWTNP EEFNPERF ANTSINYKGQ sp|Q9ZW95|C7352_ARATH/1- 430 2.86e-10 HSNELWGEDA NEFNPERF TTRSFASSRH sp|Q9ZUX1|C94C1_ARATH/1- 407 2.86e-10 RMDRIWGPDY EEFKPERW LDNEGKFRPE sp|Q93Z79|C14A1_ARATH/1- 449 2.86e-10 RDPEIWGADA NEFNPERF SEGVSKACKH sp|Q9LJY5|C05AK_ARATH/1- 418 5.02e-10 MRDPNVWEDP EEFKPERF LASSRSGQED sp|Q9LJY7|C75AK_ARATH/1- 415 1.39e-09 MRDPTTWEDP DEFKPERF LRQEEERRAL sp|Q0WQ07|C7051_ARATH/1- 414 1.39e-09 MRDPDSWQDP DEFKPERF LASLSREEDK sp|Q9LHA1|C8D11_ARATH/1- 416 1.73e-09 HRDPKLWEEP EKFKPERF EKKGEDKKLM sp|B9DFU2|MAX1_ARATH/1-4 435 1.73e-09 AKDPKNFPEP EKFKPERF DPNGEEEKHR sp|Q9LMM1|C86A4_ARATH/1- 428 1.99e-09 RMKSTWGEDC LEFNPERW ISPIDGKFIN sp|Q9FF18|C7351_ARATH/1- 436 2.39e-09 HSEELWGKDA NQFNPERF GGRPFASGRH sp|Q9SLP1|C78A9_ARATH/1- 439 3.82e-09 AHDPHVWENP LEFKPERF VAKEGEVEFS sp|P92994|TCMO_ARATH/1-4 414 3.82e-09 ANNPNSWKKP EEFRPERF FEEESHVEAN sp|Q9SZ46|C82C4_ARATH/1- 429 4.30e-09 QRDPKVYMEP NEFRPERF ITGEAKEFDV sp|P58047|C71AS_ARATH/1- 412 4.82e-09 RDTEKWGPYA EEFKPERH LDLPLNFQGQ sp|Q9SHG5|C72C1_ARATH/1- 436 5.80e-09 HDSDLWGDDV KEFKPERF ANGVAGATKG sp|Q8L7D5|THAH_ARATH/1-4 397 6.96e-09 HFNDAIYENP LEFNPWRW EGKELRSGSK sp|P48421|C83A1_ARATH/1- 411 6.96e-09 RDEKEWGPNP DEFRPERF LEKEVDFKGT sp|Q9SZU1|C81F4_ARATH/1- 405 1.32e-08 HRDPDLWTEP ERFNPERF NGGEGEKDDV sp|Q9FMY1|C86B1_ARATH/1- 457 1.32e-08 RMEAIWGKDC LEFRPERW LRD sp|P48422|C86A1_ARATH/1- 422 1.32e-08 RMKTIWGEDC LEFRPERW LTADGERFET sp|Q9FIB0|C78A7_ARATH/1- 449 1.56e-08 THDQTVWSDP LKFDPERF TGNADMDIRG sp|Q6NKZ8|C14A2_ARATH/1- 444 2.33e-08 RDPEIWGPDA NDFKPERF SEGISKACKY sp|Q94IA6|C90D1_ARATH/1- 415 2.33e-08 HLDKLYYESP YKFNPWRW QERDMNTSSF sp|Q9SRQ1|C89A9_ARATH/1- 418 2.64e-08 GRDPKIWEDP LTFKPERF LENGEACDFD sp|Q9FG65|C81D1_ARATH/1- 414 3.38e-08 HRDPNTWDDP DSFKPERF EKEEEAQKLL sp|Q9SD85|F3PH_ARATH/1-4 410 3.82e-08 ARDPDQWSDP LAFKPERF LPGGEKSGVD sp|Q9FMV7|C94B1_ARATH/1- 412 3.82e-08 RMEKVWGKDW DEFKPNRW FEEEPSYGTK sp|O48786|C734A_ARATH/1- 432 3.82e-08 HDQAIWGNDV NEFNPARF ADGVPRAAKH sp|Q9LSF8|C82G1_ARATH/1- 421 3.82e-08 HRDPKIWPDP KTFKPERF MEDKSQCEKS sp|Q9FVS9|C96AF_ARATH/1- 412 5.33e-08 RMRSVWGEDA LDFKPERW ISDNGGLRHE sp|Q42602|C89A2_ARATH/1- 415 6.07e-08 GRDPVEWEEP MAFKPERF MGEEEAVDLT sp|O81077|ABAH2_ARATH/1- 405 6.07e-08 HHSSEFFPDP EKFDPSRF EVAPKPYTYM sp|Q9M066|C90C1_ARATH/1- 433 6.71e-08 HMDEDIYDNP YQFDPWRW DRINGSANSS sp|Q9LUC5|C7A15_ARATH/1- 429 7.45e-08 HDIELWGNDA AEFNPDRF KDGLSKATKS sp|O64638|C76C3_ARATH/1- 420 8.22e-08 GRDASVWENP MKFEPERF LLRETDVKGR sp|Q96242|CP74A_ARATH/1- 434 9.17e-08 TRDPKIFDRA DEFVPERF VGEEGEKLLR sp|Q9ASR3|C7091_ARATH/1- 433 1.02e-07 SDKTLWGSDA DKFNPMRF ANGVSRAANH sp|Q6TBX7|LUT1_ARATH/1-4 454 1.02e-07 HRSSEVWEKA EEFLPERF DIDGAI sp|O64989|C90B1_ARATH/1- 423 1.02e-07 HLDNSRYDQP NLFNPWRW QQQNNGASSS sp|O22203|C98A3_ARATH/1- 407 1.02e-07 ARDPAVWKNP FEFRPERF LEEDVDMKGH sp|Q42569|C90A1_ARATH/1- 388 1.12e-07 HLDPNHFKDA RTFNPWRW QSNSVTTGPS sp|O81346|C79B2_ARATH/1- 444 1.12e-07 GRNPKVWADP LCFKPERH LNECSEVTLT sp|Q9FLC8|C79A2_ARATH/1- 434 1.23e-07 GRNPSVWDKP HKFDPERH LSTNTCVDLN sp|Q9ZSY9|C74B2_ARATH/1- 417 1.23e-07 MRDANVFDEP EEFKPDRY VGETGSELLN sp|Q9LZ31|C77A4_ARATH/1- 422 1.35e-07 SEDPRIWNNP KKFDPDRF MLGKEDADIT sp|Q9LMX7|C78A5_ARATH/1- 428 1.50e-07 THNAKIWTDP EAFMPERF ISEDVSIMGS sp|A0A140JWM8|C7162_ARAT 393 1.64e-07 HKNPEYFPEP EKFEPSRF EGSGPKPYTY sp|O65790|C81F1_ARATH/1- 408 1.64e-07 HRDPEIWEEP EKFNPDRY NDGCGSDYYV sp|Q9C5Y2|KAO2_ARATH/1-4 409 1.80e-07 HLDPEIYPDP KKFDPSRW EGYTPKAGTF sp|O64698|C7102_ARATH/1- 408 1.80e-07 DASFQGFTEP NRFDPDRF SETRQEDQVF sp|Q501D8|C79B3_ARATH/1- 446 1.80e-07 GRNPKVWSDP LSFKPERH LNECSEVTLT sp|O64636|C76C1_ARATH/1- 419 1.97e-07 GRDPSVWDNP SQFEPERF LGKDMDVRGR sp|O65438|C71AR_ARATH/1- 407 2.37e-07 RNPAIWGLDA NEYRPERH FWYEFGFQRT sp|Q9SAA9|CP511_ARATH/1- 401 2.37e-07 NRLPHIFKDP DTYDPERF SPGREEDKAA sp|Q9T093|C70B3_ARATH/1- 434 2.80e-07 RDKAIWGEDA EQFNPLRF ENGISQATIH sp|Q9C788|C70B1_ARATH/1- 440 2.80e-07 RMEYNWGSDA ALFKPERW LKDGVFQNAS sp|Q42600|C84A1_ARATH/1- 426 3.06e-07 GRDPTSWTDP DTFRPSRF LEPGVPDFKG sp|F4JW83|C84A4_ARATH/1- 415 4.61e-07 GRDPNSWSDP ESFNPGRF LNPIAPDLKG sp|O23051|KAO1_ARATH/1-4 411 4.97e-07 HIDPEVFPDP RKFDPARW DNGFVPKAGA sp|Q949P1|ABAH1_ARATH/1- 385 5.38e-07 HHSADIFSNP GKFDPSRF EVAPKPNTFM sp|Q9LVY7|C7161_ARATH/1- 397 6.29e-07 HMNPDYFPEP ERFEPNRF EGSGPKPYTY sp|Q9FUY7|C79F2_ARATH/1- 436 2.14e-06 GRNPKIWKDP LAYEPERH LQGDGITKEV sp|P48421|C83A1_ARATH/1- 47 2.98e-06 LPVIGNLLQL QKLNPQRF FAGWAKKYGP sp|Q9SLP1|C78A9_ARATH/1- 262 3.18e-06 LNWTDHLPWL SEFDPQRI RSRCSNLVPK -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif EEFKPERF MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|P58048|C71B8_ARATH/1- 1.6e-10 411_[3]_48 sp|Q9ZW95|C7352_ARATH/1- 2.9e-10 429_[3]_30 sp|Q9ZUX1|C94C1_ARATH/1- 2.9e-10 406_[3]_53 sp|Q93Z79|C14A1_ARATH/1- 2.9e-10 448_[3]_11 sp|Q9LJY5|C05AK_ARATH/1- 5e-10 417_[3]_42 sp|Q9LJY7|C75AK_ARATH/1- 1.4e-09 414_[3]_45 sp|Q0WQ07|C7051_ARATH/1- 1.4e-09 413_[3]_46 sp|Q9LHA1|C8D11_ARATH/1- 1.7e-09 415_[3]_44 sp|B9DFU2|MAX1_ARATH/1-4 1.7e-09 434_[3]_25 sp|Q9LMM1|C86A4_ARATH/1- 2e-09 427_[3]_32 sp|Q9FF18|C7351_ARATH/1- 2.4e-09 435_[3]_24 sp|Q9SLP1|C78A9_ARATH/1- 3.2e-06 261_[3]_169_[3]_21 sp|P92994|TCMO_ARATH/1-4 3.8e-09 413_[3]_46 sp|Q9SZ46|C82C4_ARATH/1- 4.3e-09 428_[3]_31 sp|P58047|C71AS_ARATH/1- 4.8e-09 411_[3]_48 sp|Q9SHG5|C72C1_ARATH/1- 5.8e-09 435_[3]_24 sp|Q8L7D5|THAH_ARATH/1-4 7e-09 396_[3]_63 sp|P48421|C83A1_ARATH/1- 3e-06 46_[3]_356_[3]_49 sp|Q9SZU1|C81F4_ARATH/1- 1.3e-08 404_[3]_55 sp|Q9FMY1|C86B1_ARATH/1- 1.3e-08 456_[3]_3 sp|P48422|C86A1_ARATH/1- 1.3e-08 421_[3]_38 sp|Q9FIB0|C78A7_ARATH/1- 1.6e-08 448_[3]_11 sp|Q6NKZ8|C14A2_ARATH/1- 2.3e-08 443_[3]_16 sp|Q94IA6|C90D1_ARATH/1- 2.3e-08 414_[3]_45 sp|Q9SRQ1|C89A9_ARATH/1- 2.6e-08 417_[3]_42 sp|Q9FG65|C81D1_ARATH/1- 3.4e-08 413_[3]_46 sp|Q9SD85|F3PH_ARATH/1-4 3.8e-08 409_[3]_50 sp|Q9FMV7|C94B1_ARATH/1- 3.8e-08 411_[3]_48 sp|O48786|C734A_ARATH/1- 3.8e-08 431_[3]_28 sp|Q9LSF8|C82G1_ARATH/1- 3.8e-08 420_[3]_39 sp|Q9FVS9|C96AF_ARATH/1- 5.3e-08 411_[3]_48 sp|Q42602|C89A2_ARATH/1- 6.1e-08 414_[3]_45 sp|O81077|ABAH2_ARATH/1- 6.1e-08 404_[3]_55 sp|Q9M066|C90C1_ARATH/1- 6.7e-08 432_[3]_27 sp|Q9LUC5|C7A15_ARATH/1- 7.5e-08 428_[3]_31 sp|O64638|C76C3_ARATH/1- 8.2e-08 419_[3]_40 sp|Q96242|CP74A_ARATH/1- 9.2e-08 433_[3]_26 sp|Q9ASR3|C7091_ARATH/1- 1e-07 432_[3]_27 sp|Q6TBX7|LUT1_ARATH/1-4 1e-07 453_[3]_6 sp|O64989|C90B1_ARATH/1- 1e-07 422_[3]_37 sp|O22203|C98A3_ARATH/1- 1e-07 406_[3]_53 sp|Q42569|C90A1_ARATH/1- 1.1e-07 387_[3]_72 sp|O81346|C79B2_ARATH/1- 1.1e-07 443_[3]_16 sp|Q9FLC8|C79A2_ARATH/1- 1.2e-07 433_[3]_26 sp|Q9ZSY9|C74B2_ARATH/1- 1.2e-07 416_[3]_43 sp|Q9LZ31|C77A4_ARATH/1- 1.4e-07 421_[3]_38 sp|Q9LMX7|C78A5_ARATH/1- 1.5e-07 427_[3]_32 sp|A0A140JWM8|C7162_ARAT 1.6e-07 392_[3]_67 sp|O65790|C81F1_ARATH/1- 1.6e-07 407_[3]_52 sp|Q9C5Y2|KAO2_ARATH/1-4 1.8e-07 408_[3]_51 sp|O64698|C7102_ARATH/1- 1.8e-07 407_[3]_52 sp|Q501D8|C79B3_ARATH/1- 1.8e-07 445_[3]_14 sp|O64636|C76C1_ARATH/1- 2e-07 418_[3]_41 sp|O65438|C71AR_ARATH/1- 2.4e-07 406_[3]_53 sp|Q9SAA9|CP511_ARATH/1- 2.4e-07 400_[3]_59 sp|Q9T093|C70B3_ARATH/1- 2.8e-07 433_[3]_26 sp|Q9C788|C70B1_ARATH/1- 2.8e-07 439_[3]_20 sp|Q42600|C84A1_ARATH/1- 3.1e-07 425_[3]_34 sp|F4JW83|C84A4_ARATH/1- 4.6e-07 414_[3]_45 sp|O23051|KAO1_ARATH/1-4 5e-07 410_[3]_49 sp|Q949P1|ABAH1_ARATH/1- 5.4e-07 384_[3]_75 sp|Q9LVY7|C7161_ARATH/1- 6.3e-07 396_[3]_63 sp|Q9FUY7|C79F2_ARATH/1- 2.1e-06 435_[3]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif EEFKPERF MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF EEFKPERF width=8 seqs=65 sp|P58048|C71B8_ARATH/1- ( 412) EEFNPERF 1 sp|Q9ZW95|C7352_ARATH/1- ( 430) NEFNPERF 1 sp|Q9ZUX1|C94C1_ARATH/1- ( 407) EEFKPERW 1 sp|Q93Z79|C14A1_ARATH/1- ( 449) NEFNPERF 1 sp|Q9LJY5|C05AK_ARATH/1- ( 418) EEFKPERF 1 sp|Q9LJY7|C75AK_ARATH/1- ( 415) DEFKPERF 1 sp|Q0WQ07|C7051_ARATH/1- ( 414) DEFKPERF 1 sp|Q9LHA1|C8D11_ARATH/1- ( 416) EKFKPERF 1 sp|B9DFU2|MAX1_ARATH/1-4 ( 435) EKFKPERF 1 sp|Q9LMM1|C86A4_ARATH/1- ( 428) LEFNPERW 1 sp|Q9FF18|C7351_ARATH/1- ( 436) NQFNPERF 1 sp|Q9SLP1|C78A9_ARATH/1- ( 439) LEFKPERF 1 sp|P92994|TCMO_ARATH/1-4 ( 414) EEFRPERF 1 sp|Q9SZ46|C82C4_ARATH/1- ( 429) NEFRPERF 1 sp|P58047|C71AS_ARATH/1- ( 412) EEFKPERH 1 sp|Q9SHG5|C72C1_ARATH/1- ( 436) KEFKPERF 1 sp|Q8L7D5|THAH_ARATH/1-4 ( 397) LEFNPWRW 1 sp|P48421|C83A1_ARATH/1- ( 411) DEFRPERF 1 sp|Q9SZU1|C81F4_ARATH/1- ( 405) ERFNPERF 1 sp|Q9FMY1|C86B1_ARATH/1- ( 457) LEFRPERW 1 sp|P48422|C86A1_ARATH/1- ( 422) LEFRPERW 1 sp|Q9FIB0|C78A7_ARATH/1- ( 449) LKFDPERF 1 sp|Q6NKZ8|C14A2_ARATH/1- ( 444) NDFKPERF 1 sp|Q94IA6|C90D1_ARATH/1- ( 415) YKFNPWRW 1 sp|Q9SRQ1|C89A9_ARATH/1- ( 418) LTFKPERF 1 sp|Q9FG65|C81D1_ARATH/1- ( 414) DSFKPERF 1 sp|Q9SD85|F3PH_ARATH/1-4 ( 410) LAFKPERF 1 sp|Q9FMV7|C94B1_ARATH/1- ( 412) DEFKPNRW 1 sp|O48786|C734A_ARATH/1- ( 432) NEFNPARF 1 sp|Q9LSF8|C82G1_ARATH/1- ( 421) KTFKPERF 1 sp|Q9FVS9|C96AF_ARATH/1- ( 412) LDFKPERW 1 sp|Q42602|C89A2_ARATH/1- ( 415) MAFKPERF 1 sp|O81077|ABAH2_ARATH/1- ( 405) EKFDPSRF 1 sp|Q9M066|C90C1_ARATH/1- ( 433) YQFDPWRW 1 sp|Q9LUC5|C7A15_ARATH/1- ( 429) AEFNPDRF 1 sp|O64638|C76C3_ARATH/1- ( 420) MKFEPERF 1 sp|Q96242|CP74A_ARATH/1- ( 434) DEFVPERF 1 sp|Q9ASR3|C7091_ARATH/1- ( 433) DKFNPMRF 1 sp|Q6TBX7|LUT1_ARATH/1-4 ( 454) EEFLPERF 1 sp|O64989|C90B1_ARATH/1- ( 423) NLFNPWRW 1 sp|O22203|C98A3_ARATH/1- ( 407) FEFRPERF 1 sp|Q42569|C90A1_ARATH/1- ( 388) RTFNPWRW 1 sp|O81346|C79B2_ARATH/1- ( 444) LCFKPERH 1 sp|Q9FLC8|C79A2_ARATH/1- ( 434) HKFDPERH 1 sp|Q9ZSY9|C74B2_ARATH/1- ( 417) EEFKPDRY 1 sp|Q9LZ31|C77A4_ARATH/1- ( 422) KKFDPDRF 1 sp|Q9LMX7|C78A5_ARATH/1- ( 428) EAFMPERF 1 sp|A0A140JWM8|C7162_ARAT ( 393) EKFEPSRF 1 sp|O65790|C81F1_ARATH/1- ( 408) EKFNPDRY 1 sp|Q9C5Y2|KAO2_ARATH/1-4 ( 409) KKFDPSRW 1 sp|O64698|C7102_ARATH/1- ( 408) NRFDPDRF 1 sp|Q501D8|C79B3_ARATH/1- ( 446) LSFKPERH 1 sp|O64636|C76C1_ARATH/1- ( 419) SQFEPERF 1 sp|O65438|C71AR_ARATH/1- ( 407) NEYRPERH 1 sp|Q9SAA9|CP511_ARATH/1- ( 401) DTYDPERF 1 sp|Q9T093|C70B3_ARATH/1- ( 434) EQFNPLRF 1 sp|Q9C788|C70B1_ARATH/1- ( 440) ALFKPERW 1 sp|Q42600|C84A1_ARATH/1- ( 426) DTFRPSRF 1 sp|F4JW83|C84A4_ARATH/1- ( 415) ESFNPGRF 1 sp|O23051|KAO1_ARATH/1-4 ( 411) RKFDPARW 1 sp|Q949P1|ABAH1_ARATH/1- ( 385) GKFDPSRF 1 sp|Q9LVY7|C7161_ARATH/1- ( 397) ERFEPNRF 1 sp|Q9FUY7|C79F2_ARATH/1- ( 436) LAYEPERH 1 sp|P48421|C83A1_ARATH/1- ( 47) QKLNPQRF 1 sp|Q9SLP1|C78A9_ARATH/1- ( 262) SEFDPQRI 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif EEFKPERF MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 8 n= 31280 bayes= 7.15601 E= 6.6e-147 -64 -395 136 186 -183 -171 -47 -460 6 62 -5 173 -413 -25 -78 -90 -282 -396 -495 16 15 30 -57 245 -501 -380 -274 -462 175 -178 -381 -250 -414 124 -30 -45 52 -398 -497 -360 -436 -301 -561 -577 405 -565 -437 -385 -582 -231 -362 -513 -539 -494 -589 -460 -514 -394 -311 70 -379 -496 168 22 -630 -486 -357 -562 228 -271 -98 266 -527 -230 103 -403 -396 -196 -585 -466 -897 -781 -884 -998 -975 -803 -847 -1065 -973 -997 -1052 -907 428 -864 -925 -932 -920 -1012 -886 -884 -74 -479 63 314 -581 -179 -343 -530 -299 -270 -99 -26 -468 37 -369 14 -351 -461 207 -437 -870 -737 -868 -971 -954 -789 -773 -1001 -795 -957 -986 -852 -837 -774 405 -901 -887 -986 -841 -852 -734 -581 -802 -830 354 -773 192 -203 -776 -630 -635 -637 -792 -601 -721 -716 -714 -666 365 56 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif EEFKPERF MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 8 nsites= 65 E= 6.6e-147 0.030769 0.000000 0.138462 0.261538 0.015385 0.015385 0.015385 0.000000 0.061538 0.184615 0.030769 0.138462 0.000000 0.015385 0.030769 0.030769 0.000000 0.000000 0.000000 0.030769 0.061538 0.015385 0.030769 0.400000 0.000000 0.000000 0.000000 0.000000 0.230769 0.030769 0.000000 0.000000 0.000000 0.061538 0.046154 0.046154 0.076923 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.938462 0.000000 0.000000 0.000000 0.000000 0.015385 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.046154 0.000000 0.000000 0.169231 0.076923 0.000000 0.000000 0.000000 0.000000 0.323077 0.015385 0.015385 0.261538 0.000000 0.000000 0.123077 0.000000 0.000000 0.015385 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.030769 0.000000 0.076923 0.630769 0.000000 0.015385 0.000000 0.000000 0.000000 0.015385 0.015385 0.030769 0.000000 0.030769 0.000000 0.076923 0.000000 0.000000 0.076923 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.646154 0.000000 0.092308 0.015385 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.215385 0.030769 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif EEFKPERF MEME-3 regular expression -------------------------------------------------------------------------------- E[EK]F[KN]PER[FW] -------------------------------------------------------------------------------- Time 240.71 secs. ******************************************************************************** ******************************************************************************** MOTIF GYDIPKGT MEME-4 width = 8 sites = 55 llr = 810 E-value = 2.3e-104 ******************************************************************************** -------------------------------------------------------------------------------- Motif GYDIPKGT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::2:: pos.-specific C :::::::: probability D 1:2:::1: matrix E ::1::::: F :11::::: G 8:::::8: H ::1::::: I ::17:::: K ::1::7:: L :11::::: M :::::::: N ::::::1: P ::::9::: Q :::::::: R :::::1:: S :::::::2 T ::1::::4 V ::13:::1 W :::::::2 Y :61::::: bits 6.4 5.8 5.1 4.5 Relative 3.8 * Entropy 3.2 ** * * (21.2 bits) 2.6 ** **** 1.9 ** ***** 1.3 ** ***** 0.6 ******** 0.0 -------- Multilevel GYDIPKGT consensus V S sequence W -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYDIPKGT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- sp|Q94IA6|C90D1_ARATH/1- 388 3.72e-10 RKAMKDVEIK GYVIPKGW CFLAYLRSVH sp|Q42569|C90A1_ARATH/1- 361 3.72e-10 RRAMTDVEIK GYKIPKGW KVFSSFRAVH sp|Q9SD85|F3PH_ARATH/1-4 383 4.92e-10 HIASESCEIN GYHIPKGS TLLTNIWAIA sp|Q501D8|C79B3_ARATH/1- 419 4.92e-10 HVALSDTTVA GYHIPKGS QVLLSRYGLG sp|O81346|C79B2_ARATH/1- 417 4.92e-10 HVALSDTTVA GYHIPKGS QVLLSRYGLG sp|O22203|C98A3_ARATH/1- 380 4.92e-10 HRSNADVKIG GYDIPKGS NVHVNVWAVA sp|O23051|KAO1_ARATH/1-4 384 7.59e-10 REAKTDVEMN GYLIPKGW KVLTWFRDVH sp|Q9M066|C90C1_ARATH/1- 406 7.59e-10 RKALKDVEIK GYLIPKGW CVLASFISVH sp|Q949P1|ABAH1_ARATH/1- 358 7.59e-10 REAVEDVEYE GYLIPKGW KVLPLFRNIH sp|O81077|ABAH2_ARATH/1- 378 7.59e-10 REAVQDVEYD GYLIPKGW KVLPLFRRIH sp|Q9C5Y2|KAO2_ARATH/1-4 382 8.47e-10 REAKSDVQMD GYIIPKGW KVLTWFRNVH sp|P48421|C83A1_ARATH/1- 383 1.05e-09 RACIQDTKIA GYDIPAGT TVNVNAWAVS sp|Q9FLC8|C79A2_ARATH/1- 407 1.22e-09 HMSTTDTVVD GYFIPKGS HVLISRMGIG sp|F4JW83|C84A4_ARATH/1- 388 1.22e-09 HETVKDTEIS GYFIPKGS RVMVNTYALG sp|Q9FUY7|C79F2_ARATH/1- 409 1.22e-09 HVARQDTTLG GYFIPKGS HIHVCRPGLG sp|Q949U1|C79F1_ARATH/1- 410 1.22e-09 HLARQDTTLG GYFIPKGS HIHVCRPGLG sp|Q9LVY7|C7161_ARATH/1- 370 3.56e-09 REAIDHFSFK GFYIPKGW KLYWSATATH sp|A0A140JWM8|C7162_ARAT 366 3.56e-09 REAIDHFSFK GFYIPKGW KLYWSATATH sp|Q8L7D5|THAH_ARATH/1-4 370 3.56e-09 RKAVNDVEIK GYTIPAGW IVAVIPPAVH sp|O48786|C734A_ARATH/1- 404 3.56e-09 RRAKSDVKLG GYKIPCGT ELLIPIIAVH sp|Q9SZ46|C82C4_ARATH/1- 402 3.56e-09 REAMEDCTVA GYYVPCGT RLIVNVWKIQ sp|Q9LHA1|C8D11_ARATH/1- 389 4.90e-09 HLASEDCIVD GYDVPRGT IILVNAWAIH sp|Q93ZB2|KO1_ARATH/1-46 396 7.78e-09 RYAHEDTQIG GYHVPAGS EIAINIYGCN sp|O64989|C90B1_ARATH/1- 396 1.25e-08 RKALKDVRYK GYDIPSGW KVLPVISAVH sp|Q9LZ31|C77A4_ARATH/1- 395 1.73e-08 HAVMETTTLA GYDIPAGV NVEVYLPGIS sp|Q9FIB0|C78A7_ARATH/1- 422 3.48e-08 LSTSDVQLSN GMVIPKGT TAMVNMWAIT sp|O64698|C7102_ARATH/1- 383 5.67e-08 IATNDFPLTE SYTIPKGT IVFPSVFDAS sp|O23365|C97B3_ARATH/1- 446 6.63e-08 LPGGHKGEKE GHKVPKGT DIFISVYNLH sp|B9DFU2|MAX1_ARATH/1-4 408 8.39e-08 RETAKEVEIG GYLLPKGT WVWLALGVLA sp|O65438|C71AR_ARATH/1- 379 1.00e-07 RLPSEDVQLK GYDISAGT HVIINAWALQ sp|Q9SZU1|C81F4_ARATH/1- 378 1.09e-07 RSTAEDIKIG GYDVPRDT MVMVNAWAIH sp|O65790|C81F1_ARATH/1- 381 1.09e-07 RSPTDDMKIG GYDVPRDT IVMVNAWAIH sp|P58048|C71B8_ARATH/1- 385 1.30e-07 RQVMSDIEIQ GYHIPKNA HIKISTYAIG sp|Q0WQ07|C7051_ARATH/1- 387 1.30e-07 REFQEGCEIG GFFVPKNT TLIVNSYAMM sp|Q9LSF8|C82G1_ARATH/1- 394 2.10e-07 REAREDCFVG GYRVEKGT RLLVNIWKLH sp|P92994|TCMO_ARATH/1-4 387 2.83e-07 HMNLHDAKLA GYDIPAES KILVNAWWLA sp|O64638|C76C3_ARATH/1- 393 3.07e-07 RKSESDVQIM GFLVPKNT QVVVNVWAIG sp|Q9SAA9|CP511_ARATH/1- 374 3.07e-07 DFSVTARDGK TYDIPKGH IVATSPAFAN sp|Q9ASR3|C7091_ARATH/1- 405 4.96e-07 REASVNIKLG DLEIPKGT TVVIPLLKMH sp|Q9LMM1|C86A4_ARATH/1- 400 4.96e-07 HVENDDVLPD GTFVPAGS SVTYSIYAAG sp|Q42600|C84A1_ARATH/1- 399 4.96e-07 HETAEDTSID GFFIPKKS RVMINAFAIG sp|P48422|C86A1_ARATH/1- 394 7.70e-07 YVVDDDVLPD GTFVPRGS TVTYSIYSIG sp|Q42602|C89A2_ARATH/1- 388 8.28e-07 HSVTEDTVLG GYKVPKNG TINFMVAEIG sp|F4IK45|C70B2_ARATH/1- 459 8.28e-07 RLASEDMKLG NLEIPKGT T sp|Q9T093|C70B3_ARATH/1- 406 1.03e-06 REATQDMKVG HLEIPKGT SIIIPLLKMH sp|Q9SLP1|C78A9_ARATH/1- 412 1.29e-06 RLAITDTIID GRRVPAGT TAMVNMWAIA sp|Q9FG65|C81D1_ARATH/1- 387 1.38e-06 HMASEDCKIG SYDMPRGT TLLVNAWAIH sp|P58047|C71AS_ARATH/1- 382 1.38e-06 RQLSEDVKLK DMIIPAGT MIIVFINAWA sp|Q9LJY5|C05AK_ARATH/1- 391 3.82e-06 REFQQGCKIG GFYIPEKT TLLINAYVVM sp|Q6NKZ8|C14A2_ARATH/1- 416 4.94e-06 REASKDIRLG DLVVPKGV CIWTLIPALH sp|Q9FF18|C7351_ARATH/1- 408 5.99e-06 RMAFEDLKLG DLTIPKGL SIWIPVLAIH sp|Q9ZW95|C7352_ARATH/1- 402 6.84e-06 RMAFEDIKLG DLIIPKGL SIWIPVLAIH sp|Q93Z79|C14A1_ARATH/1- 421 7.80e-06 REALEDTKLG NLVVPKGV CIWTLIPTLH sp|O64636|C76C1_ARATH/1- 392 2.80e-05 RKAESDAEIL GFMVLKDT QVLVNVWAIG sp|Q9C788|C70B1_ARATH/1- 179 3.33e-05 RMTLDSICKV GFGVEIGT LAPELPENHF -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYDIPKGT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|Q94IA6|C90D1_ARATH/1- 3.7e-10 387_[4]_72 sp|Q42569|C90A1_ARATH/1- 3.7e-10 360_[4]_99 sp|Q9SD85|F3PH_ARATH/1-4 4.9e-10 382_[4]_77 sp|Q501D8|C79B3_ARATH/1- 4.9e-10 418_[4]_41 sp|O81346|C79B2_ARATH/1- 4.9e-10 416_[4]_43 sp|O22203|C98A3_ARATH/1- 4.9e-10 379_[4]_80 sp|O23051|KAO1_ARATH/1-4 7.6e-10 383_[4]_76 sp|Q9M066|C90C1_ARATH/1- 7.6e-10 405_[4]_54 sp|Q949P1|ABAH1_ARATH/1- 7.6e-10 357_[4]_102 sp|O81077|ABAH2_ARATH/1- 7.6e-10 377_[4]_82 sp|Q9C5Y2|KAO2_ARATH/1-4 8.5e-10 381_[4]_78 sp|P48421|C83A1_ARATH/1- 1e-09 382_[4]_77 sp|Q9FLC8|C79A2_ARATH/1- 1.2e-09 406_[4]_53 sp|F4JW83|C84A4_ARATH/1- 1.2e-09 387_[4]_72 sp|Q9FUY7|C79F2_ARATH/1- 1.2e-09 408_[4]_51 sp|Q949U1|C79F1_ARATH/1- 1.2e-09 409_[4]_50 sp|Q9LVY7|C7161_ARATH/1- 3.6e-09 369_[4]_90 sp|A0A140JWM8|C7162_ARAT 3.6e-09 365_[4]_94 sp|Q8L7D5|THAH_ARATH/1-4 3.6e-09 369_[4]_90 sp|O48786|C734A_ARATH/1- 3.6e-09 403_[4]_56 sp|Q9SZ46|C82C4_ARATH/1- 3.6e-09 401_[4]_58 sp|Q9LHA1|C8D11_ARATH/1- 4.9e-09 388_[4]_71 sp|Q93ZB2|KO1_ARATH/1-46 7.8e-09 395_[4]_64 sp|O64989|C90B1_ARATH/1- 1.3e-08 395_[4]_64 sp|Q9LZ31|C77A4_ARATH/1- 1.7e-08 394_[4]_65 sp|Q9FIB0|C78A7_ARATH/1- 3.5e-08 421_[4]_38 sp|O64698|C7102_ARATH/1- 5.7e-08 382_[4]_77 sp|O23365|C97B3_ARATH/1- 6.6e-08 445_[4]_14 sp|B9DFU2|MAX1_ARATH/1-4 8.4e-08 407_[4]_52 sp|O65438|C71AR_ARATH/1- 1e-07 378_[4]_81 sp|Q9SZU1|C81F4_ARATH/1- 1.1e-07 377_[4]_82 sp|O65790|C81F1_ARATH/1- 1.1e-07 380_[4]_79 sp|P58048|C71B8_ARATH/1- 1.3e-07 384_[4]_75 sp|Q0WQ07|C7051_ARATH/1- 1.3e-07 386_[4]_73 sp|Q9LSF8|C82G1_ARATH/1- 2.1e-07 393_[4]_66 sp|P92994|TCMO_ARATH/1-4 2.8e-07 386_[4]_73 sp|O64638|C76C3_ARATH/1- 3.1e-07 392_[4]_67 sp|Q9SAA9|CP511_ARATH/1- 3.1e-07 373_[4]_86 sp|Q9ASR3|C7091_ARATH/1- 5e-07 404_[4]_55 sp|Q9LMM1|C86A4_ARATH/1- 5e-07 399_[4]_60 sp|Q42600|C84A1_ARATH/1- 5e-07 398_[4]_61 sp|P48422|C86A1_ARATH/1- 7.7e-07 393_[4]_66 sp|Q42602|C89A2_ARATH/1- 8.3e-07 387_[4]_72 sp|F4IK45|C70B2_ARATH/1- 8.3e-07 458_[4]_1 sp|Q9T093|C70B3_ARATH/1- 1e-06 405_[4]_54 sp|Q9SLP1|C78A9_ARATH/1- 1.3e-06 411_[4]_48 sp|Q9FG65|C81D1_ARATH/1- 1.4e-06 386_[4]_73 sp|P58047|C71AS_ARATH/1- 1.4e-06 381_[4]_78 sp|Q9LJY5|C05AK_ARATH/1- 3.8e-06 390_[4]_69 sp|Q6NKZ8|C14A2_ARATH/1- 4.9e-06 415_[4]_44 sp|Q9FF18|C7351_ARATH/1- 6e-06 407_[4]_52 sp|Q9ZW95|C7352_ARATH/1- 6.8e-06 401_[4]_58 sp|Q93Z79|C14A1_ARATH/1- 7.8e-06 420_[4]_39 sp|O64636|C76C1_ARATH/1- 2.8e-05 391_[4]_68 sp|Q9C788|C70B1_ARATH/1- 3.3e-05 178_[4]_281 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYDIPKGT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GYDIPKGT width=8 seqs=55 sp|Q94IA6|C90D1_ARATH/1- ( 388) GYVIPKGW 1 sp|Q42569|C90A1_ARATH/1- ( 361) GYKIPKGW 1 sp|Q9SD85|F3PH_ARATH/1-4 ( 383) GYHIPKGS 1 sp|Q501D8|C79B3_ARATH/1- ( 419) GYHIPKGS 1 sp|O81346|C79B2_ARATH/1- ( 417) GYHIPKGS 1 sp|O22203|C98A3_ARATH/1- ( 380) GYDIPKGS 1 sp|O23051|KAO1_ARATH/1-4 ( 384) GYLIPKGW 1 sp|Q9M066|C90C1_ARATH/1- ( 406) GYLIPKGW 1 sp|Q949P1|ABAH1_ARATH/1- ( 358) GYLIPKGW 1 sp|O81077|ABAH2_ARATH/1- ( 378) GYLIPKGW 1 sp|Q9C5Y2|KAO2_ARATH/1-4 ( 382) GYIIPKGW 1 sp|P48421|C83A1_ARATH/1- ( 383) GYDIPAGT 1 sp|Q9FLC8|C79A2_ARATH/1- ( 407) GYFIPKGS 1 sp|F4JW83|C84A4_ARATH/1- ( 388) GYFIPKGS 1 sp|Q9FUY7|C79F2_ARATH/1- ( 409) GYFIPKGS 1 sp|Q949U1|C79F1_ARATH/1- ( 410) GYFIPKGS 1 sp|Q9LVY7|C7161_ARATH/1- ( 370) GFYIPKGW 1 sp|A0A140JWM8|C7162_ARAT ( 366) GFYIPKGW 1 sp|Q8L7D5|THAH_ARATH/1-4 ( 370) GYTIPAGW 1 sp|O48786|C734A_ARATH/1- ( 404) GYKIPCGT 1 sp|Q9SZ46|C82C4_ARATH/1- ( 402) GYYVPCGT 1 sp|Q9LHA1|C8D11_ARATH/1- ( 389) GYDVPRGT 1 sp|Q93ZB2|KO1_ARATH/1-46 ( 396) GYHVPAGS 1 sp|O64989|C90B1_ARATH/1- ( 396) GYDIPSGW 1 sp|Q9LZ31|C77A4_ARATH/1- ( 395) GYDIPAGV 1 sp|Q9FIB0|C78A7_ARATH/1- ( 422) GMVIPKGT 1 sp|O64698|C7102_ARATH/1- ( 383) SYTIPKGT 1 sp|O23365|C97B3_ARATH/1- ( 446) GHKVPKGT 1 sp|B9DFU2|MAX1_ARATH/1-4 ( 408) GYLLPKGT 1 sp|O65438|C71AR_ARATH/1- ( 379) GYDISAGT 1 sp|Q9SZU1|C81F4_ARATH/1- ( 378) GYDVPRDT 1 sp|O65790|C81F1_ARATH/1- ( 381) GYDVPRDT 1 sp|P58048|C71B8_ARATH/1- ( 385) GYHIPKNA 1 sp|Q0WQ07|C7051_ARATH/1- ( 387) GFFVPKNT 1 sp|Q9LSF8|C82G1_ARATH/1- ( 394) GYRVEKGT 1 sp|P92994|TCMO_ARATH/1-4 ( 387) GYDIPAES 1 sp|O64638|C76C3_ARATH/1- ( 393) GFLVPKNT 1 sp|Q9SAA9|CP511_ARATH/1- ( 374) TYDIPKGH 1 sp|Q9ASR3|C7091_ARATH/1- ( 405) DLEIPKGT 1 sp|Q9LMM1|C86A4_ARATH/1- ( 400) GTFVPAGS 1 sp|Q42600|C84A1_ARATH/1- ( 399) GFFIPKKS 1 sp|P48422|C86A1_ARATH/1- ( 394) GTFVPRGS 1 sp|Q42602|C89A2_ARATH/1- ( 388) GYKVPKNG 1 sp|F4IK45|C70B2_ARATH/1- ( 459) NLEIPKGT 1 sp|Q9T093|C70B3_ARATH/1- ( 406) HLEIPKGT 1 sp|Q9SLP1|C78A9_ARATH/1- ( 412) GRRVPAGT 1 sp|Q9FG65|C81D1_ARATH/1- ( 387) SYDMPRGT 1 sp|P58047|C71AS_ARATH/1- ( 382) DMIIPAGT 1 sp|Q9LJY5|C05AK_ARATH/1- ( 391) GFYIPEKT 1 sp|Q6NKZ8|C14A2_ARATH/1- ( 416) DLVVPKGV 1 sp|Q9FF18|C7351_ARATH/1- ( 408) DLTIPKGL 1 sp|Q9ZW95|C7352_ARATH/1- ( 402) DLIIPKGL 1 sp|Q93Z79|C14A1_ARATH/1- ( 421) NLVVPKGV 1 sp|O64636|C76C1_ARATH/1- ( 392) GFMVLKDT 1 sp|Q9C788|C70B1_ARATH/1- ( 179) GFGVEIGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYDIPKGT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 8 n= 31280 bayes= 10.359 E= 2.3e-104 -293 -391 41 -445 -605 380 -80 -585 -440 -635 -531 -37 -513 -400 -450 -117 -183 -516 -522 -479 -243 -219 -366 -361 145 -396 12 -329 -364 -16 -8 -322 -398 -286 -179 -294 -79 -300 -197 445 -256 -306 185 -24 127 -155 180 -20 19 -5 -62 -286 -431 -202 -65 -304 9 22 -444 135 -495 -421 -736 -743 -551 -734 -750 333 -721 -214 -71 -671 -751 -655 -763 -678 -501 226 -717 -588 -269 -391 -436 -108 -549 -445 -420 -502 -419 -262 -486 -431 411 -325 -448 -177 -369 -439 -593 -512 143 156 -578 -177 -727 -554 -385 -182 330 -585 -526 -422 -607 -250 69 -185 -465 -556 -610 -521 -290 -389 -28 -213 -603 383 -416 -582 -123 -632 -528 48 -512 -400 -447 -353 -445 -512 -519 -477 -144 -295 -513 -547 -496 -177 -56 -374 -480 -165 -365 -342 -529 -374 -487 163 309 -28 332 -456 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYDIPKGT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 8 nsites= 55 E= 2.3e-104 0.000000 0.000000 0.090909 0.000000 0.000000 0.800000 0.018182 0.000000 0.000000 0.000000 0.000000 0.036364 0.000000 0.000000 0.000000 0.036364 0.018182 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.145455 0.000000 0.018182 0.000000 0.000000 0.127273 0.036364 0.000000 0.000000 0.000000 0.018182 0.000000 0.036364 0.000000 0.000000 0.618182 0.000000 0.000000 0.200000 0.054545 0.145455 0.018182 0.090909 0.054545 0.072727 0.109091 0.018182 0.000000 0.000000 0.000000 0.036364 0.000000 0.054545 0.072727 0.000000 0.072727 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.654545 0.000000 0.018182 0.018182 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.309091 0.000000 0.000000 0.000000 0.000000 0.000000 0.036364 0.000000 0.000000 0.000000 0.000000 0.000000 0.018182 0.000000 0.000000 0.927273 0.000000 0.000000 0.018182 0.000000 0.000000 0.000000 0.000000 0.163636 0.036364 0.000000 0.018182 0.000000 0.000000 0.000000 0.018182 0.654545 0.000000 0.000000 0.000000 0.000000 0.000000 0.090909 0.018182 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.054545 0.018182 0.000000 0.818182 0.000000 0.000000 0.036364 0.000000 0.000000 0.072727 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.018182 0.000000 0.000000 0.000000 0.000000 0.018182 0.018182 0.000000 0.000000 0.036364 0.000000 0.000000 0.000000 0.000000 0.000000 0.236364 0.418182 0.054545 0.200000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYDIPKGT MEME-4 regular expression -------------------------------------------------------------------------------- GYD[IV]PKG[TSW] -------------------------------------------------------------------------------- Time 295.08 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|B9DFU2|MAX1_ARATH/1-4 8.04e-16 384_[2(1.52e-06)]_15_[4(8.39e-08)]_\ 19_[3(1.73e-09)]_17_[1(5.20e-09)] sp|O22203|C98A3_ARATH/1- 8.45e-20 40_[3(8.75e-05)]_307_[2(2.66e-09)]_\ 16_[4(4.92e-10)]_19_[3(1.02e-07)]_16_[1(5.06e-10)]_29 sp|O64989|C90B1_ARATH/1- 1.06e-13 395_[4(1.25e-08)]_19_[3(1.02e-07)]_\ 24_[1(1.41e-09)]_5 sp|O81077|ABAH2_ARATH/1- 8.41e-16 60_[2(5.38e-07)]_309_[4(7.59e-10)]_\ 19_[3(6.07e-08)]_11_[1(4.87e-08)]_36 sp|O81346|C79B2_ARATH/1- 6.17e-13 392_[2(2.48e-08)]_16_[4(4.92e-10)]_\ 19_[3(1.12e-07)]_16 sp|P48421|C83A1_ARATH/1- 9.50e-19 46_[3(2.98e-06)]_304_[2(6.61e-07)]_\ 16_[4(1.05e-09)]_20_[3(6.96e-09)]_16_[1(1.82e-10)]_25 sp|P92994|TCMO_ARATH/1-4 2.20e-15 362_[2(1.25e-06)]_16_[4(2.83e-07)]_\ 19_[3(3.82e-09)]_18_[1(2.50e-09)]_20 sp|Q42569|C90A1_ARATH/1- 5.97e-15 360_[4(3.72e-10)]_19_[3(1.12e-07)]_\ 15_[1(1.41e-09)]_49 sp|Q501D8|C79B3_ARATH/1- 9.58e-13 394_[2(2.48e-08)]_16_[4(4.92e-10)]_\ 19_[3(1.80e-07)]_14 sp|Q6TBX7|LUT1_ARATH/1-4 2.16e-07 402_[2(5.19e-08)]_43_[3(1.02e-07)]_\ 6 sp|Q93VK5|LUT5_ARATH/1-4 3.82e-04 432_[2(1.43e-08)]_27 sp|Q93ZB2|KO1_ARATH/1-46 3.75e-13 371_[2(1.95e-07)]_16_[4(7.78e-09)]_\ 19_[3(4.27e-05)]_16_[1(1.34e-08)]_13 sp|Q949P1|ABAH1_ARATH/1- 2.46e-14 47_[2(2.10e-06)]_302_[4(7.59e-10)]_\ 19_[3(5.38e-07)]_11_[1(5.26e-08)]_56 sp|Q949U1|C79F1_ARATH/1- 6.60e-11 385_[2(6.24e-08)]_16_[4(1.22e-09)]_\ 19_[3(5.00e-06)]_23 sp|Q94IA6|C90D1_ARATH/1- 1.21e-14 387_[4(3.72e-10)]_19_[3(2.33e-08)]_\ 12_[1(6.37e-09)]_25 sp|Q96242|CP74A_ARATH/1- 6.09e-06 379_[2(4.27e-07)]_46_[3(9.17e-08)]_\ 26 sp|Q9FUY7|C79F2_ARATH/1- 3.05e-11 384_[2(6.24e-08)]_16_[4(1.22e-09)]_\ 19_[3(2.14e-06)]_24 sp|Q9LMX7|C78A5_ARATH/1- 4.81e-15 375_[2(3.46e-10)]_44_[3(1.50e-07)]_\ 16_[1(9.56e-10)]_8 sp|Q9LSF8|C82G1_ARATH/1- 1.42e-17 369_[2(4.64e-09)]_16_[4(2.10e-07)]_\ 19_[3(3.82e-08)]_16_[1(4.15e-10)]_15 sp|Q9M066|C90C1_ARATH/1- 2.08e-13 405_[4(7.59e-10)]_19_[3(6.71e-08)]_\ 15_[1(6.37e-09)]_4 sp|Q9SAA9|CP511_ARATH/1- 3.97e-16 345_[2(1.07e-09)]_20_[4(3.07e-07)]_\ 19_[3(2.37e-07)]_17_[1(6.92e-09)]_34 sp|Q9SRQ1|C89A9_ARATH/1- 4.05e-16 366_[2(1.57e-08)]_16_[4(9.64e-05)]_\ 19_[3(2.64e-08)]_21_[1(1.41e-11)]_13 sp|Q9SZ46|C82C4_ARATH/1- 3.80e-20 377_[2(4.56e-09)]_16_[4(3.56e-09)]_\ 19_[3(4.30e-09)]_19_[1(4.15e-10)]_4 sp|Q9ZSY9|C74B2_ARATH/1- 5.03e-06 362_[2(1.68e-07)]_46_[3(1.23e-07)]_\ 43 sp|F4IK45|C70B2_ARATH/1- 6.01e-09 156_[1(5.11e-07)]_271_[2(4.24e-08)]_\ 15_[4(8.28e-07)]_1 sp|F4JW83|C84A4_ARATH/1- 1.01e-19 364_[2(3.46e-10)]_15_[4(1.22e-09)]_\ 19_[3(4.61e-07)]_17_[1(4.15e-10)]_20 sp|O23051|KAO1_ARATH/1-4 1.33e-12 383_[4(7.59e-10)]_19_[3(4.97e-07)]_\ 13_[1(2.01e-08)]_28 sp|O23365|C97B3_ARATH/1- 3.44e-07 414_[2(2.65e-07)]_23_[4(6.63e-08)]_\ 14 sp|O48786|C734A_ARATH/1- 8.17e-18 380_[2(1.53e-09)]_15_[4(3.56e-09)]_\ 20_[3(3.82e-08)]_16_[1(4.14e-08)]_4 sp|O64698|C7102_ARATH/1- 1.39e-12 358_[2(6.14e-06)]_16_[4(5.67e-08)]_\ 17_[3(1.80e-07)]_16_[1(5.69e-08)]_28 sp|O65790|C81F1_ARATH/1- 2.63e-15 356_[2(1.15e-07)]_16_[4(1.09e-07)]_\ 19_[3(1.64e-07)]_15_[1(1.97e-09)]_29 sp|P48422|C86A1_ARATH/1- 4.08e-16 369_[2(5.62e-09)]_16_[4(7.70e-07)]_\ 20_[3(1.32e-08)]_19_[1(9.73e-09)]_11 sp|Q0WQ07|C7051_ARATH/1- 1.80e-19 363_[2(4.56e-09)]_15_[4(1.30e-07)]_\ 19_[3(1.39e-09)]_19_[1(1.82e-10)]_19 sp|Q42600|C84A1_ARATH/1- 2.67e-16 375_[2(5.62e-09)]_15_[4(4.96e-07)]_\ 19_[3(3.06e-07)]_17_[1(4.15e-10)]_9 sp|Q6NKZ8|C14A2_ARATH/1- 7.35e-12 392_[2(4.43e-10)]_15_[4(4.94e-06)]_\ 20_[3(2.33e-08)]_16 sp|Q8L7D5|THAH_ARATH/1-4 2.34e-13 369_[4(3.56e-09)]_19_[3(6.96e-09)]_\ 14_[1(1.63e-08)]_41 sp|Q93Z79|C14A1_ARATH/1- 2.06e-13 397_[2(3.46e-10)]_15_[4(7.80e-06)]_\ 20_[3(2.86e-10)]_11 sp|Q9C5Y2|KAO2_ARATH/1-4 4.38e-12 381_[4(8.47e-10)]_19_[3(1.80e-07)]_\ 12_[1(1.13e-07)]_31 sp|Q9C788|C70B1_ARATH/1- 1.20e-08 178_[4(3.33e-05)]_201_[2(4.56e-09)]_\ 44_[3(2.80e-07)]_20 sp|Q9FF18|C7351_ARATH/1- 4.23e-16 100_[1(3.32e-07)]_276_[2(1.53e-09)]_\ 15_[4(5.99e-06)]_20_[3(2.39e-09)]_4_[1(7.40e-05)]_1_[1(2.64e-08)]_3 sp|Q9FLC8|C79A2_ARATH/1- 5.66e-17 382_[2(2.48e-08)]_16_[4(1.22e-09)]_\ 19_[3(1.23e-07)]_18_[1(1.81e-08)] sp|Q9FMV7|C94B1_ARATH/1- 6.21e-13 359_[2(2.07e-09)]_44_[3(3.82e-08)]_\ 23_[1(1.34e-08)]_17 sp|Q9FMY1|C86B1_ARATH/1- 8.46e-08 404_[2(1.87e-08)]_44_[3(1.32e-08)]_\ 3 sp|Q9FVS9|C96AF_ARATH/1- 1.63e-13 359_[2(2.20e-09)]_44_[3(5.33e-08)]_\ 17_[1(1.34e-08)]_23 sp|Q9LJY5|C05AK_ARATH/1- 2.68e-18 367_[2(1.07e-09)]_15_[4(3.82e-06)]_\ 19_[3(5.02e-10)]_21_[1(1.28e-09)]_13 sp|Q9LMM1|C86A4_ARATH/1- 3.73e-17 191_[1(5.49e-07)]_176_[2(5.62e-09)]_\ 16_[4(4.96e-07)]_20_[3(1.99e-09)]_18_[1(7.78e-09)]_6 sp|Q9SD85|F3PH_ARATH/1-4 2.62e-20 358_[2(1.87e-08)]_16_[4(4.92e-10)]_\ 19_[3(3.82e-08)]_20_[1(5.56e-11)]_22 sp|Q9SHG5|C72C1_ARATH/1- 3.70e-12 384_[2(5.75e-08)]_43_[3(5.80e-09)]_\ 16_[1(1.63e-08)] sp|Q9SLP1|C78A9_ARATH/1- 4.65e-12 261_[3(3.18e-06)]_117_[2(2.07e-09)]_\ 17_[4(1.29e-06)]_19_[3(3.82e-09)]_21 sp|Q9SZU1|C81F4_ARATH/1- 2.06e-18 353_[2(4.56e-09)]_16_[4(1.09e-07)]_\ 19_[3(1.32e-08)]_15_[1(3.03e-10)]_32 sp|Q9T093|C70B3_ARATH/1- 3.82e-13 382_[2(4.24e-08)]_15_[4(1.03e-06)]_\ 20_[3(2.80e-07)]_16_[1(7.16e-08)]_2 sp|Q9ZUX1|C94C1_ARATH/1- 6.18e-14 354_[2(4.91e-08)]_44_[3(2.86e-10)]_\ 17_[1(8.32e-08)]_28 sp|Q9ZW95|C7352_ARATH/1- 6.55e-17 101_[1(5.49e-07)]_269_[2(1.53e-09)]_\ 15_[4(6.84e-06)]_20_[3(2.86e-10)]_13_[1(2.64e-08)]_9 sp|A0A140JWM8|C7162_ARAT 1.82e-15 140_[2(4.26e-06)]_194_[2(5.38e-07)]_\ 15_[4(3.56e-09)]_19_[3(1.64e-07)]_12_[1(8.75e-09)]_47 sp|O64636|C76C1_ARATH/1- 5.06e-15 92_[2(5.33e-05)]_267_[2(2.72e-08)]_\ 16_[4(2.80e-05)]_19_[3(1.97e-07)]_16_[1(5.56e-11)]_17 sp|P58048|C71B8_ARATH/1- 2.28e-21 185_[1(3.16e-06)]_167_[2(6.15e-10)]_\ 16_[4(1.30e-07)]_19_[3(1.65e-10)]_16_[1(1.13e-10)]_24 sp|Q42602|C89A2_ARATH/1- 9.59e-17 363_[2(4.24e-08)]_16_[4(8.28e-07)]_\ 19_[3(6.07e-08)]_19_[1(5.56e-11)]_18 sp|Q9ASR3|C7091_ARATH/1- 7.11e-14 99_[1(4.44e-07)]_274_[2(4.24e-08)]_\ 15_[4(4.96e-07)]_20_[3(1.02e-07)]_16_[1(6.64e-08)]_3 sp|Q9FIB0|C78A7_ARATH/1- 1.21e-13 395_[2(3.46e-10)]_18_[4(3.48e-08)]_\ 19_[3(1.56e-08)]_11 sp|Q9LHA1|C8D11_ARATH/1- 1.30e-19 364_[2(4.56e-09)]_16_[4(4.90e-09)]_\ 19_[3(1.73e-09)]_11_[1(2.76e-09)]_25 sp|Q9LVY7|C7161_ARATH/1- 7.04e-16 144_[2(4.26e-06)]_194_[2(5.38e-07)]_\ 15_[4(3.56e-09)]_19_[3(6.29e-07)]_12_[1(8.28e-10)]_43 sp|Q9LZ31|C77A4_ARATH/1- 1.51e-15 370_[2(4.27e-07)]_16_[4(1.73e-08)]_\ 19_[3(1.35e-07)]_19_[1(2.25e-09)]_11 sp|O64638|C76C3_ARATH/1- 1.88e-17 92_[2(7.21e-05)]_269_[2(4.56e-09)]_\ 15_[4(3.07e-07)]_19_[3(8.22e-08)]_16_[1(1.82e-10)]_16 sp|O65438|C71AR_ARATH/1- 2.51e-16 355_[2(4.60e-08)]_15_[4(1.00e-07)]_\ 20_[3(2.37e-07)]_16_[1(3.03e-10)]_29 sp|P58047|C71AS_ARATH/1- 1.84e-17 357_[2(4.56e-09)]_16_[4(1.38e-06)]_\ 22_[3(4.82e-09)]_16_[1(6.70e-10)]_24 sp|Q9FG65|C81D1_ARATH/1- 1.13e-15 362_[2(4.56e-09)]_16_[4(1.38e-06)]_\ 19_[3(3.38e-08)]_11_[1(7.78e-09)]_27 sp|Q9LJY7|C75AK_ARATH/1- 6.07e-16 364_[2(4.56e-09)]_42_[3(1.39e-09)]_\ 14_[1(1.28e-09)]_23 sp|Q9LUC5|C7A15_ARATH/1- 9.66e-13 377_[2(2.07e-09)]_43_[3(7.45e-08)]_\ 16_[1(2.19e-08)]_7 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (4) found. ******************************************************************************** CPU: kodomo ********************************************************************************